4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on phr1 Shoot-Pi
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List of experiments correlated with "phr1 Shoot-Pi"  Help Download transcriptome of top 30
Score Experiment Correlation from
phr1 Shoot-Pi		 Correlation to
phr1 Shoot-Pi		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 phr1 Shoot-Pi 1.00 >More info 1.00 >More info WT Root-Pi shoots Original data GEO bulk
2 phr1 phl1 Root-Pi -0.82 >More info -0.81 >More info WT Shoot+Pi roots Original data GEO bulk
3 Col-0 Root 100 mM ATP 30 min 0.80 >More info 0.76 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
4 Col-0 low oxygen -0.78 >More info -0.75 >More info Col-0 Original data GEO bulk
5 afb3-1 2h KNO3 0.65 >More info 0.85 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
6 atmyc2 cop1 Seedling Dark 0.72 >More info 0.75 >More info WT Seedling Dark Original data GEO bulk
7 cop1 Seedling Dark 0.69 >More info 0.77 >More info WT Seedling Dark Original data GEO bulk
8 bbx24 in Simulated Shade -0.64 >More info -0.81 >More info WT in simulated shade shade seedling Original data
9 toc1-1-85hr 0.66 >More info 0.79 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
10 WT-16ºC -0.67 >More info -0.77 >More info WT-23ºC Original data GEO bulk
11 WT Seedling BL 0.67 >More info 0.76 >More info WT Seedling Dark Original data GEO bulk
12 CabpBVR2 -0.71 >More info -0.72 >More info WT Original data GEO bulk
13 WT light 0.69 >More info 0.69 >More info WT dark Original data GEO bulk
14 AtLysM RLK1 mutant water 0.70 >More info 0.66 >More info WT water Original data GEO bulk
15 aerial organ callus inducing medium 96 h -0.66 >More info -0.70 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
16 toc1-1-73hr 0.61 >More info 0.73 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
17 toc1-1-81hr 0.64 >More info 0.70 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
18 TAMM27 roots 2hr KCl control 0.66 >More info 0.63 >More info Col0 roots 2hr KCl control root Original data GEO bulk
19 WT 30μM arsenate 8 hours. 0.59 >More info 0.70 >More info WT control (not supplemented). Original data
20 phyB Dark 0.61 >More info 0.67 >More info WT(Ler) Dark Original data GEO bulk
21 35SpBVR3 -0.62 >More info -0.66 >More info WT Original data GEO bulk
22 Root dark control 7h 0.63 >More info 0.63 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
23 2hr continuous KNO3 ECR cell -0.52 >More info -0.74 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
24 DC3000 7h -0.61 >More info -0.63 >More info Mock 7h DC3000 Original data GEO bulk
25 35:SUB1C -0.63 >More info -0.61 >More info WT whole seedling Original data GEO bulk
26 bri1-116 0.51 >More info 0.73 >More info Col seedling Original data GEO bulk
27 csn5 (csn5a-2 csn5b) dark 0.66 >More info 0.57 >More info WT dark Original data GEO bulk
28 phyAphyB Dark -0.56 >More info -0.66 >More info phyB Dark Original data GEO bulk
29 WT Red light 18h 0.57 >More info 0.64 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
30 TAMM27 roots 2hr KNO3 nitrogen 0.57 >More info 0.64 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
31 L2.4 mutant 0.59 >More info 0.62 >More info Wt Original data GEO bulk
32 Chemically 0.45 >More info 0.76 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
33 C58 35dpi -0.65 >More info -0.55 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
34 NAA -AA -0.61 >More info -0.59 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
35 Dark 4 h pls RedLight 1min 0.47 >More info 0.73 >More info Dark 4 h Original data Light treatments
36 root hypoxia pGL2 0.57 >More info 0.62 >More info root hypoxia total hypoxia root Original data GEO bulk
37 phr1 phl1 Shoot-Pi 0.68 >More info 0.51 >More info WT Shoot-Pi shoots Original data GEO bulk
38 35S-MIF1 dark grown -0.68 >More info -0.51 >More info Dark-grown WT control Original data GEO bulk
39 col-5 hrpA 12h -0.58 >More info -0.61 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
40 6m.KCl 0.63 >More info 0.55 >More info To. KCl 14 day old Roots Original data GEO bulk
41 3m.KCl 0.64 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
42 WT 1mM phosphate 8 hours. 0.59 >More info 0.58 >More info WT control (not supplemented). Original data
43 root - 08% oxygen - 30min -0.41 >More info -0.76 >More info root - 21% oxygen - 30min Original data GEO bulk
44 dor drought -0.53 >More info -0.63 >More info WT drought Original data GEO bulk
45 Root dark control 24h 0.55 >More info 0.61 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
46 entire vegetative rosette 0.62 >More info 0.54 >More info Col-0 Mock WL entire vegetative rosette Original data
47 toc1-1-57hr 0.57 >More info 0.59 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
48 toc1-1-53hr 0.47 >More info 0.69 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
49 WT Rc50 0.47 >More info 0.69 >More info WT Dark red light whole seedling Original data GEO bulk
50 WT no Pi -0.66 >More info -0.49 >More info WT complete seedlings Original data
51 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.61 >More info 0.53 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
52 nar1-4/- 0.52 >More info 0.62 >More info WT whole seedling Original data GEO bulk
53 root control pGL2 0.56 >More info 0.58 >More info root control total control root Original data GEO bulk
54 glk1 glk2 GLK1-GR +DEX 4h 0.43 >More info 0.70 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
55 E.coli 0157 H7 7h -0.49 >More info -0.64 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
56 2hr transitory KNO3 ECR cell -0.43 >More info -0.70 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
57 Col-0 low oxygen 0.52 >More info 0.60 >More info Col-0 control low oxygen root Original data GEO bulk
58 IRP1-OE-Fe--root -0.59 >More info -0.53 >More info COL-0-Fe--root root Original data
59 Differentiation 36h -0.64 >More info -0.48 >More info Differentiation 0h leaves Original data
60 tumour -0.62 >More info -0.50 >More info non-tumor tumour Original data GEO bulk
61 K starvation (root) 0.58 >More info 0.54 >More info Ws (root) Original data GEO bulk
62 Root -K 0.58 >More info 0.54 >More info Control-root Original data GEO bulk
63 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.60 >More info 0.52 >More info 2d dark-grown WT seedling Original data GEO bulk
64 col-5 DC3000 12h -0.54 >More info -0.58 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
65 OXUPB1-2 meristematic zone 0.50 >More info 0.61 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
66 IAA/inhibitor B Treated 0.51 >More info 0.60 >More info IAA Treated Original data GEO bulk
67 aerial organ callus inducing medium 48 h -0.54 >More info -0.57 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
68 Laer pretreat GA+JA Flg22 2h -0.59 >More info -0.52 >More info Laer pretreat water control leaf discs Original data GEO bulk
69 10mM sucrose -0.58 >More info -0.53 >More info control Whole seedling Original data GEO bulk
70 T101D 10mM NH4NO3 -0.51 >More info -0.60 >More info col 10mM NH4NO3 Root Original data
71 roots bhlh100/101 0uM Fe 0.62 >More info 0.48 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
72 erf104-ko Flg22 4h -0.71 >More info -0.39 >More info erf104-ko H2O 4h Original data GEO bulk
73 Col-7 Sucrose -0.63 >More info -0.47 >More info col-7 Original data GEO bulk
74 Differentiation 48h -0.64 >More info -0.46 >More info Differentiation 0h leaves Original data
75 6m.KNO3 0.59 >More info 0.51 >More info To. KNO3 14 day old Roots Original data GEO bulk
76 elf3-7-23ºC -0.54 >More info -0.56 >More info WT-23ºC Original data GEO bulk
77 WT(Ler) Rc50 0.42 >More info 0.68 >More info WT(Ler) Dark Original data GEO bulk
78 35S:VND7-VP16-GR+CHX -0.54 >More info -0.55 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
79 cngc19 -0.67 >More info -0.42 >More info Col-0 root Original data GEO bulk
80 SA 0.44 >More info 0.65 >More info WT mock Whole seedling Original data GEO bulk
81 3d old, both 10mM sucrose and 0.2µM SMX -0.57 >More info -0.52 >More info control Whole seedling Original data GEO bulk
82 col-5 DC3000-avrRpm 4h -0.58 >More info -0.51 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
83 dorn1-1 Root 100 mM ATP 30 min -0.63 >More info -0.45 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
84 mpk6-ko Flg22 4h -0.55 >More info -0.53 >More info mpk6-ko H2O 4h Original data GEO bulk
85 4h decapitation -0.57 >More info -0.51 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
86 Shoot apex inflorescence (after bolting) 0.43 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
87 plant (tga2-5-6) 4h phytoprostane A1 0.40 >More info 0.68 >More info plant (tga2-5-6) 4h control Original data GEO bulk
88 seedlings + TSA 0.53 >More info 0.54 >More info control seedlings 10-day old whole seedling Original data GEO bulk
89 Dark 4 h pls UV-A 5 min 0.45 >More info 0.62 >More info Dark 4 h Original data Light treatments
90 35S:MYB28 like miR 0.33 >More info 0.74 >More info WT for miR Original data GEO bulk
91 whole roots -Fe 6 hour 0.37 >More info 0.70 >More info whole roots standard Original data GEO bulk
92 Inflorescence miR-NGA -0.48 >More info -0.59 >More info Inflorescence wt Original data GEO bulk
93 hira-root -0.49 >More info -0.58 >More info WT-root root Original data
94 pif4pif5 mut dark 0.57 >More info 0.49 >More info WT dark Original data GEO bulk
95 csn4-1 mutant 0.59 >More info 0.47 >More info WT dark Original data GEO bulk
96 WR 35S 8h BL 0.59 >More info 0.47 >More info WR 35S 0h BL brassinosteroid root Original data
97 mp-B4149 mutant IAA 0.55 >More info 0.51 >More info GR-bdl IAA Original data GEO bulk
98 csn3-1 dark 0.59 >More info 0.47 >More info WT dark Original data GEO bulk
99 WT(Ler) Rc15 0.40 >More info 0.66 >More info WT(Ler) Dark Original data GEO bulk
100 Ts5 roots 2hr KNO3 nitrogen 0.52 >More info 0.53 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
101 R. solani AG2-1 0.41 >More info 0.64 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
102 columella auxin 0.43 >More info 0.62 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
103 GiantCell Root 0.50 >More info 0.54 >More info Control Root laser captured giant cells Original data GEO bulk
104 Mutant arf2-6 (IAA) 0.50 >More info 0.54 >More info Col (IAA) Original data GEO bulk
105 Differentiation 12h -0.60 >More info -0.44 >More info Differentiation 0h leaves Original data
106 4C 1h 0.64 >More info 0.40 >More info 4C 0h Original data GEO bulk
107 col-5 hrpA 2h -0.50 >More info -0.53 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
108 hrpA 7h -0.52 >More info -0.51 >More info Mock 7h hrpA Original data GEO bulk
109 WR 35S 3h BL 0.59 >More info 0.44 >More info WR 35S 0h BL brassinosteroid root Original data
110 Mutant iaa5_6_19 -0.50 >More info -0.53 >More info Col Original data GEO bulk
111 etiolated cop1BBX22-GFPox 0.43 >More info 0.60 >More info etiolated Col-0 whole seedlings Original data GEO bulk
112 E.coli TUV86 2 fliC 7h -0.47 >More info -0.56 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
113 AvrRpt2 Col-0 6hpi -0.54 >More info -0.48 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
114 root cells cortex 140mM NaCl 1 hour 0.51 >More info 0.51 >More info root cells cortex standard 1 hour root cells cortex Original data
115 Laer Flg22 2h -0.56 >More info -0.46 >More info Laer Control leaf discs Original data GEO bulk
116 Cor 10h -0.58 >More info -0.44 >More info Mock 10h Cor Original data GEO bulk
117 ahg2-1sid2-2 0.40 >More info 0.62 >More info WT (Col) control Original data GEO bulk
118 DUO1 induced 24h 0.50 >More info 0.51 >More info 24hr-not-induced whole plant Original data GEO bulk
119 SCL3 OE -0.67 >More info -0.34 >More info Col-0 whole root Original data GEO bulk
120 Phytoprostane A1 4 h 0.37 >More info 0.64 >More info Col-0 Original data GEO bulk
121 oligomycin 1 h 0.36 >More info 0.65 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
122 3m.KNO3 0.55 >More info 0.45 >More info To. KNO3 14 day old Roots Original data GEO bulk
123 inhibitor B Treated 0.38 >More info 0.62 >More info Negative Control Original data GEO bulk
124 ulp1c ulp1d +Pto -0.46 >More info -0.54 >More info ulp1c ulp1d mock Original data GEO bulk
125 dicamba 0.48 >More info 0.52 >More info WT mock whole seedling Original data GEO bulk
126 24h volatiles Sp. HRO-C48 0.43 >More info 0.57 >More info 24h untreated whole seedling Original data GEO bulk
127 epidermis auxin 0.43 >More info 0.57 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
128 Laer pretreat GA+JA Flg22 0h -0.59 >More info -0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
129 Laer pretreat GA+JA Flg22 1h -0.60 >More info -0.39 >More info Laer pretreat water control leaf discs Original data GEO bulk
130 DUO1 induced 12h 0.44 >More info 0.55 >More info 12hr-not-induced whole plant Original data GEO bulk
131 Root submergence 24h 0.47 >More info 0.52 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
132 root stele pH4.6 0.42 >More info 0.57 >More info root stele pH5.7 Original data GEO bulk
133 pad4-PsmES4326-24hpi 0.52 >More info 0.46 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
134 fri-flc -0.52 >More info -0.46 >More info WT Original data GEO bulk
135 Light 4h polysome-bound 0.50 >More info 0.48 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
136 HopZ1a treated -0.55 >More info -0.43 >More info col Original data GEO bulk
137 5-Triiodobenzoic acid3 h 0.37 >More info 0.61 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
138 Mutant arf19-1 -0.42 >More info -0.56 >More info Col Original data GEO bulk
139 35S::ERF104 Flg22 4h -0.47 >More info -0.51 >More info 35S::ERF104 H2O 4h Original data GEO bulk
140 eif3h polysome -0.52 >More info -0.45 >More info WT polysome Original data GEO bulk
141 R. solani AG8 0.38 >More info 0.59 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
142 Aerobic prt6 -0.31 >More info -0.66 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
143 vte1-1 3d vernalization -0.47 >More info -0.50 >More info WT 3d vernalization Original data GEO bulk
144 iron minus 0 h 0.50 >More info 0.46 >More info iron +0 h root Original data GEO bulk
145 WT flg22 2h -0.54 >More info -0.42 >More info WT 0h Leaf tissue Original data GEO bulk
146 Mutant ga1-5 -0.55 >More info -0.41 >More info Ler-1 Original data Comparison of plant hormone related mutant
147 Aerobic e1 ate2 -0.33 >More info -0.63 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
148 sicy-192 cotyledons -0.50 >More info -0.45 >More info WT cotyledons cotyledons Original data
149 Col leaf scrape 5 dpi -0.71 >More info -0.24 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
150 Light 4h steady-state 0.50 >More info 0.45 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
151 WT 1wk -P -0.50 >More info -0.45 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
152 Laer treat paclobutrazol (PAC) -0.54 >More info -0.41 >More info Laer Control leaf discs Original data GEO bulk
153 Differentiation 24h -0.61 >More info -0.34 >More info Differentiation 0h leaves Original data
154 Root -Cs 0.44 >More info 0.51 >More info Control-root Original data GEO bulk
155 root cells endodermis 140mM NaCl 1 hour 0.41 >More info 0.54 >More info root cells endodermis standard 1 hour root cells endodermis Original data
156 BLM 0.50 >More info 0.44 >More info CK BLM seedling Original data
157 mpk6-ko H2O 4h 0.69 >More info 0.25 >More info Col-0 H2O 4h Original data GEO bulk
158 Osmotic Stress 24 h (root) 0.51 >More info 0.43 >More info Stress mock 24 h (root) Original data Stress treatments
159 phyABDE Rc50 0.43 >More info 0.51 >More info phyABDE Dark red light whole seedling Original data GEO bulk
160 Laer pretreat GA Flg22 0h -0.55 >More info -0.38 >More info Laer pretreat water control leaf discs Original data GEO bulk
161 WT in -N -0.54 >More info -0.39 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
162 bZIP TDNA mutant -0.53 >More info -0.40 >More info Col-WT mature pollen Original data GEO bulk
163 hrcC -0.50 >More info -0.43 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
164 root epidermis and lateral root cap pH4.6 0.35 >More info 0.58 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
165 NahG -0.42 >More info -0.51 >More info Col-0 Leaves Original data GEO bulk
166 pericycle auxin 0.42 >More info 0.51 >More info pericycle control 5 uM indole-3-acetic acid pericycle Original data GEO bulk
167 root control pSultr2:2 0.56 >More info 0.36 >More info root control total control root Original data GEO bulk
168 plant (Col-0) 4h phytoprostane A1 0.40 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
169 root cells epidermis 140mM NaCl 48 hours 0.36 >More info 0.56 >More info root cells epidermis standard 1 hour root cells epidermis Original data
170 root control pPEP 0.42 >More info 0.50 >More info root control total control root Original data GEO bulk
171 HRE1-RNAi20 normoxia -0.42 >More info -0.50 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
172 BLM+INA 0.42 >More info 0.50 >More info CK BLM and INA seedling Original data
173 Leaf 0.67 >More info 0.24 >More info Control for tissue data leaf Original data GEO bulk
174 eif3h non-polysome -0.53 >More info -0.38 >More info WT non-polysome Original data GEO bulk
175 T6 leaf-drought -0.51 >More info -0.40 >More info T6 leaf-well watered Original data GEO bulk
176 PRR5-VP 12h light on 0.51 >More info 0.40 >More info WT 12h light on whole plant Original data GEO bulk
177 noa1-2 0.53 >More info 0.38 >More info Col-0 whole seedlings Original data GEO bulk
178 erf104-ko H2O 4h 0.67 >More info 0.24 >More info Col-0 H2O 4h Original data GEO bulk
179 ASL9-ox 0.53 >More info 0.38 >More info WT aerial parts of seedlings Original data GEO bulk
180 NaCl scm -0.39 >More info -0.52 >More info NaCl Col Original data GEO bulk
181 Ambient CO2 fully expanded leaf 0.69 >More info 0.22 >More info Control for tissue data fully expanded leaf Original data
182 6h +Pi -0.31 >More info -0.60 >More info 6h -Pi root Original data GEO bulk
183 Whole root - low pH 12H 0.30 >More info 0.61 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
184 Laer pretreat GA Flg22 2h -0.50 >More info -0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
185 ahg2-1 0.37 >More info 0.53 >More info WT (Col) control Original data GEO bulk
186 iae1 -0.26 >More info -0.64 >More info B179 Original data GEO bulk
187 2hr transitory KNO3 EPR cell 0.39 >More info 0.51 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
188 Var2-1 roots 2hr KNO3 nitrogen 0.40 >More info 0.50 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
189 Cotyledons 0.70 >More info 0.20 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
190 WT resupplied Pi 4h -0.57 >More info -0.33 >More info WT complete seedlings Original data
191 low water potential -0.56 >More info -0.33 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
192 Whole root - low pH 3H 0.34 >More info 0.55 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
193 Flagellin 4 h (leaf) -0.51 >More info -0.38 >More info Mock 4 h (leaf) Original data Elicitor treatments
194 Distal half (leaf7) 0.69 >More info 0.20 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
195 Mutant lfy-12(shoot apex) 0.55 >More info 0.33 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
196 Ambient CO2 expanding leaf 0.68 >More info 0.20 >More info Control for tissue data expanding leaf Original data
197 Seedling KUA1-IOX est -0.20 >More info -0.68 >More info Seedling KUA1-IOX mock Original data
198 leaf 0.67 >More info 0.21 >More info Control for tissue data leaf Original data GEO bulk
199 vtc2 mature somatic embryo 0.61 >More info 0.27 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
200 DUO1 induced 6h 0.37 >More info 0.51 >More info 6hr-not-induced whole plant Original data GEO bulk
201 root cells epidermis 140mM NaCl 3 hours 0.29 >More info 0.59 >More info root cells epidermis standard 1 hour root cells epidermis Original data
202 WT-elf18 -0.54 >More info -0.33 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
203 Expanding leaf 0.68 >More info 0.19 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
204 Cauline leaves 0.68 >More info 0.19 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
205 Rsch 3d -0.51 >More info -0.36 >More info Rsch CA Leaves Original data
206 Col 3d -0.51 >More info -0.36 >More info Col CA Leaves Original data
207 Light 3day hml 0.37 >More info 0.50 >More info 0h hml Original data
208 Proximalhalf (leaf7) 0.69 >More info 0.18 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
209 Laer Flg22+GA 1h -0.53 >More info -0.33 >More info Laer Control leaf discs Original data GEO bulk
210 col-5 DC3000 4h -0.54 >More info -0.32 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
211 Chitosan 3h Treatment 0.32 >More info 0.54 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
212 Col-0 0h NAA 0.32 >More info 0.54 >More info Col-0 6h MOCK Original data GEO bulk
213 Cocultivation 8 hrs root 0.31 >More info 0.55 >More info Mock cocultivation 8 hrs root Root Original data
214 Botrytis cinerea 48h -0.58 >More info -0.28 >More info control 48h Original data GEO bulk
215 Rosette leaf No2 0.69 >More info 0.17 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
216 col-5 hrpA 4h -0.51 >More info -0.34 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
217 35S:RPS4 eds1-2 8h 0.52 >More info 0.33 >More info 35S:RPS4 8h leaves Original data
218 root longitudinal zone-4 NaCl 0.33 >More info 0.52 >More info root longitudinal zone-4 Original data GEO bulk
219 Rosette leaf No12 0.69 >More info 0.16 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
220 Root -P -0.35 >More info -0.50 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
221 Truncated AC2 T2 0.52 >More info 0.32 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
222 T8 leaf-drought -0.50 >More info -0.34 >More info T8 leaf-well watered Original data GEO bulk
223 Laer Flg22+GA 2h -0.53 >More info -0.31 >More info Laer Control leaf discs Original data GEO bulk
224 pif3 Dark 0h 0.33 >More info 0.51 >More info WT Dark 0h etiolated seedling Original data GEO bulk
225 ML (Mature leaves) 35DAS 0.63 >More info 0.21 >More info Control for tissue data Original data GEO bulk
226 GRX-overexpression seedlings MV -0.23 >More info -0.61 >More info WT seedlings MV Seedlings Original data GEO bulk
227 cngc1-3 -0.63 >More info -0.20 >More info Col-0 root Original data GEO bulk
228 PAHs stress -0.53 >More info -0.30 >More info exp control phenanthrene whole plants Original data GEO bulk
229 root - 08% oxygen - 2h -0.16 >More info -0.67 >More info root - 21% oxygen - 2h Original data GEO bulk
230 rosette Dark Wounded -0.29 >More info -0.54 >More info rosette Dark Control Original data GEO bulk
231 seed germinating in countinuous light 24h SL 0.16 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
232 gun1gun5 Norflurazon 0.32 >More info 0.51 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
233 gun1-1 +lincomycin 0.31 >More info 0.52 >More info Col-0 +lincomycin Original data GEO bulk
234 anac017-2 water 3h 0.50 >More info 0.32 >More info WT water 3h 3h_water Original data GEO bulk
235 35S::ERF104 H2O 4h 0.68 >More info 0.14 >More info Col-0 H2O 4h Original data GEO bulk
236 toc1-1-89hr 0.51 >More info 0.31 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
237 Mutant sav3-2 (WL) 0.26 >More info 0.56 >More info Col-0 (WL) Original data GEO bulk
238 root longitudinal zone-1 pH 4.6 0.32 >More info 0.50 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
239 sav3-2 light 0.26 >More info 0.56 >More info Col-0 light seedlings Original data GEO bulk
240 root cells epidermis 140mM NaCl 32 hours 0.28 >More info 0.54 >More info root cells epidermis standard 1 hour root cells epidermis Original data
241 root - 08% oxygen - 48h -0.23 >More info -0.59 >More info root - 21% oxygen - 48h Original data GEO bulk
242 Laer Flg22 1h -0.52 >More info -0.29 >More info Laer Control leaf discs Original data GEO bulk
243 EL (leaves 1-2) 14DAS 0.61 >More info 0.20 >More info Control for tissue data Original data GEO bulk
244 HopZ1a treated ulp1c ulp1d -0.51 >More info -0.30 >More info col Original data GEO bulk
245 root control pSHR 0.51 >More info 0.30 >More info root control total control root Original data GEO bulk
246 miR393 0h 0.54 >More info 0.27 >More info WT 0h Leaf tissue Original data GEO bulk
247 Mutant axr3-1 (IAA) 0.27 >More info 0.54 >More info Col (IAA) Original data GEO bulk
248 ckh2 CK0 0.30 >More info 0.51 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
249 NaCl Col 0.30 >More info 0.51 >More info Col Original data GEO bulk
250 aln-1 -0.60 >More info -0.20 >More info Col-0 Aerial part of seedlings Original data
251 Emwa1 inoculated psk 3 dpi 0.61 >More info 0.19 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
252 FarRed Light 45min 0.29 >More info 0.51 >More info White Light 45min Original data Light treatments
253 0.125 mM gold 24 h 0.26 >More info 0.54 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
254 root Dosed gold 0.26 >More info 0.54 >More info root No gold .125 mM gold 24 h roots Original data
255 WT cotyledons 0.63 >More info 0.16 >More info Control for tissue data cotyledons Original data
256 ckh2 CK25 0.24 >More info 0.55 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
257 pskr1-5 0.59 >More info 0.19 >More info wild type Cotyledons Original data GEO bulk
258 upb1-1 elongation zone -0.24 >More info -0.54 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
259 root cortex pH4.6 0.27 >More info 0.50 >More info root cortex pH5.7 Original data GEO bulk
260 WT chitooctaose 0.58 >More info 0.18 >More info WT water Original data GEO bulk
261 Red/FR Light45min -0.21 >More info -0.55 >More info FarRed Light 45min Original data Light treatments
262 Laer Flg22(Agrobacterium) 2h 0.13 >More info 0.63 >More info Laer Control leaf discs Original data GEO bulk
263 Petiol (leaf7) 0.65 >More info 0.09 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
264 Pedicels stage15 0.63 >More info 0.11 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
265 Pto inoculated -0.56 >More info -0.18 >More info col Original data GEO bulk
266 WT Shoot-Pi -0.50 >More info -0.23 >More info WT Shoot+Pi shoots Original data GEO bulk
267 C2H2 ZF TDNA mutant -0.50 >More info -0.23 >More info Col-WT mature pollen Original data GEO bulk
268 Shoot -K -0.54 >More info -0.19 >More info Control-shoot Original data GEO bulk
269 K starvation (shoot) -0.54 >More info -0.19 >More info Ws (shoot) Original data GEO bulk
270 3.5h KNO3 Whole root -0.17 >More info -0.55 >More info 3.5h KCl control Whole root Whole root Original data GEO bulk
271 tbf1-mock spray -0.57 >More info -0.14 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
272 Whole root - low pH 6H 0.09 >More info 0.62 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
273 cpctry 0.01 >More info 0.70 >More info Col Original data GEO bulk
274 CCA14 dark early 0.14 >More info 0.56 >More info Col dark early Original data GEO bulk
275 line J1551-5 days control + 2 days salt s 0.17 >More info 0.53 >More info line J1551-7 days-control Original data
276 abh1 -ABA -0.18 >More info -0.52 >More info Col-0 -ABA Original data GEO bulk
277 35S:ATR1 like miR 0.18 >More info 0.52 >More info WT for miR Original data GEO bulk
278 Laer pretreat JA Flg22 1h -0.53 >More info -0.16 >More info Laer pretreat water control leaf discs Original data GEO bulk
279 TNT-seedlings 0.00 >More info 0.68 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
280 HSP90 Reduced RNAi-A3 -0.50 >More info -0.18 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
281 root - 04% oxygen - 2h -0.07 >More info -0.61 >More info root - 21% oxygen - 2h Original data GEO bulk
282 MPK6 ox Shoot Hypoxia 0.02 >More info -0.70 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
283 P. infestans 6 h (leaf) -0.52 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
284 15m.KNO3 0.62 >More info 0.05 >More info To. KNO3 14 day old Roots Original data GEO bulk
285 8hr-pH4.5 0.14 >More info 0.53 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
286 shoot control p35S -0.07 >More info -0.60 >More info shoot control total Original data GEO bulk
287 Cs shoot -0.10 >More info -0.57 >More info control shoot Original data GEO bulk
288 Shoot apex vegetative &Young leaves 0.61 >More info 0.05 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
289 bZIP1ko mutant N-Light+ 0.65 >More info 0.01 >More info WT-sib N-Light+ whole plant Original data GEO bulk
290 root longitudinal zone-4 pH 4.6 0.16 >More info 0.50 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
291 Apex 5DAS 0.57 >More info 0.09 >More info Control for tissue data Original data GEO bulk
292 Ambient CO2 leaf primordia 0.60 >More info 0.05 >More info Control for tissue data leaf primordia Original data
293 penta Flg22 1h -0.55 >More info -0.10 >More info Laer Flg22 1h leaf discs Original data GEO bulk
294 rosettes WT drought -0.51 >More info -0.14 >More info rosettes WT watered Original data GEO bulk
295 hsfa1 quadruple mutant -0.51 >More info -0.14 >More info WT (Col-0) whole seedling Original data GEO bulk
296 35S:ORE1-protoplast 6h -0.15 >More info -0.50 >More info WT none mesophyll cell protoplasts Original data GEO bulk
297 35S:RPS4 rrs1-11 24h 0.51 >More info 0.12 >More info 35S:RPS4 24h leaves Original data
298 Sepals stage15 0.55 >More info 0.07 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
299 Cocultivation 8 hrs leaf 0.50 >More info 0.12 >More info Mock cocultivation 8 hrs leaf Leaf Original data
300 Apex 14DAS 0.55 >More info 0.06 >More info Control for tissue data Original data GEO bulk
301 Seeds stage3 with siliques 0.57 >More info 0.04 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
302 Flowers stage15 0.56 >More info 0.04 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
303 Laer pretreat JA Flg22 2h -0.55 >More info -0.05 >More info Laer pretreat water control leaf discs Original data GEO bulk
304 Senescing leaf 0.52 >More info 0.08 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
305 Sulfometuron EC50 -0.50 >More info -0.10 >More info Carrier Original data GEO bulk
306 Heat shock optimum -0.05 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
307 C2 leaf-drought -0.53 >More info -0.06 >More info C2 leaf-well watered Original data GEO bulk
308 vte2 leaves 0h LT 0.06 >More info 0.53 >More info Col leaves 0h LT h 9-11th adult leaves Original data
309 IAA7mII over-expressor IAA Treated -0.10 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
310 shoot hypoxia p35S 0.02 >More info -0.61 >More info shoot hypoxia total Original data GEO bulk
311 unpollinated pistil 0.52 >More info 0.05 >More info Control for tissue data pistil Original data GEO bulk
312 lec2-1 12 DAF Seed 0.52 >More info 0.04 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
313 siliques 0.53 >More info 0.03 >More info Control for tissue data Original data GEO bulk
314 gis5 seedlings -0.52 >More info -0.03 >More info WT seedlings Whole seedlings (leaves + roots) Original data
315 Flower (stage12) 0.53 >More info 0.02 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
316 WT Root Hypoxia 0.62 >More info -0.08 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
317 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
318 ms35 silique stage 7 -0.05 >More info 0.59 >More info Ler 6.7 anther and filament Original data GEO bulk
319 flower-buds 0.50 >More info 0.03 >More info Control for tissue data Original data GEO bulk
320 Stem 2ndinternode 0.56 >More info -0.03 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
321 Imbibed 1 h (seed) 0.01 >More info -0.54 >More info Dry seed Original data Time course of early seed germination
322 Ler KAR1 24h seed -0.12 >More info 0.65 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
323 flowers 0.50 >More info 0.02 >More info Control for tissue data Original data GEO bulk
324 Carpels stage15 0.51 >More info -0.01 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
325 WT roots - Fe 0.08 >More info -0.58 >More info WT roots + Fe Roots Original data GEO bulk
326 sfr3 cold -0.67 >More info 0.18 >More info WT-cold aerial tissues Original data GEO bulk
327 Bud 0.50 >More info -0.01 >More info Control for tissue data pollen grains and tubes Original data
328 NaCl cpctry -0.01 >More info 0.50 >More info NaCl Col Original data GEO bulk
329 Stem 1st node 0.55 >More info -0.07 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
330 Whole root - low pH 1H -0.03 >More info 0.51 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
331 WT Shoot Hypoxia 0.11 >More info -0.58 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
332 Cor hrpS 10h -0.50 >More info 0.04 >More info Mock 10h Cor hrpS Original data GEO bulk
333 Shoot apex vegetative 0.50 >More info -0.04 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
334 irradiated leaf (WT 5d) -0.17 >More info 0.63 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
335 Col BTH -0.22 >More info 0.67 >More info Col rosettes Original data GEO bulk
336 siliques AtHb1 control -0.13 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
337 light 0.56 >More info -0.18 >More info dark light seedling Original data GEO bulk
338 sex4-3 0.57 >More info -0.27 >More info Col-WT leaves Original data GEO bulk
339 MPK6 ox Root Hypoxia 0.62 >More info -0.41 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
340 Leafminer damaged seedlings -0.38 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
341 Laer pretreat GA Flg22 1h -0.56 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
342 Col0-PsmES4326-24hpi -0.56 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
343 ptpks2 0.54 >More info -0.53 >More info Col-WT leaves Original data GEO bulk