4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Rose Bengal 0.5 uM
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List of experiments correlated with "Rose Bengal 0.5 uM"  Help Download transcriptome of top 30
Score Experiment Correlation from
Rose Bengal 0.5 uM		 Correlation to
Rose Bengal 0.5 uM		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Rose Bengal 0.5 uM 1.00 >More info 1.00 >More info Control RB and PER Rose Bengal Original data
2 Hydrogen Peroxide 500 uM 0.79 >More info 0.80 >More info Control RB and PER Hydrogen Peroxide Original data
3 ex2 flu dark 8hours/30 minute light 0.67 >More info 0.70 >More info col dark 8hours/30 minute light Original data GEO bulk
4 flu dark 8hours/30 minute light 0.64 >More info 0.66 >More info col dark 8hours/30 minute light Original data GEO bulk
5 TNT-seedlings 0.66 >More info 0.63 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
6 Col0-PsmES4326-24hpi 0.67 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
7 Protoplast Induced 0.63 >More info 0.65 >More info Uninduced Original data GEO bulk
8 flu 0.76 >More info 0.51 >More info WT Col Original data GEO bulk
9 IAA/inhibitor A Treated 0.75 >More info 0.52 >More info IAA Treated Original data GEO bulk
10 plant (tga2-5-6) 4h phytoprostane A1 0.70 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
11 inhibitor A Treated 0.72 >More info 0.52 >More info Negative Control Original data GEO bulk
12 WT seedlings MV 0.71 >More info 0.51 >More info WT seedlings control Seedlings Original data GEO bulk
13 WT 30μM arsenate 8 hours. 0.74 >More info 0.48 >More info WT control (not supplemented). Original data
14 NJ15 0.58 >More info 0.63 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
15 IAA/inhibitor B Treated 0.67 >More info 0.54 >More info IAA Treated Original data GEO bulk
16 WT-Dry 0.65 >More info 0.55 >More info WT-CK dehydration treatment 1h Original data
17 9 hr Hypoxia 1 hr recovery IP RNA 0.76 >More info 0.43 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
18 P.p 2.5hai 0.72 >More info 0.46 >More info At-Control roots Original data GEO bulk
19 9 hr Hypoxia 1 hr recovery Total RNA 0.74 >More info 0.44 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
20 WT+H2O2 0.69 >More info 0.48 >More info WT H2O2 Original data GEO bulk
21 Cycloheximide 3 h 0.64 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
22 (Col-0)+200 uM As 0.73 >More info 0.43 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
23 chito-tetramer 0.60 >More info 0.55 >More info Col Mock Original data GEO bulk
24 35S:RPS4 eds1-2 2h -0.51 >More info -0.64 >More info 35S:RPS4 2h leaves Original data
25 (Col-0)+100 uM As 0.70 >More info 0.45 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
26 Anoxia 0.69 >More info 0.46 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
27 inhibitor B Treated 0.68 >More info 0.47 >More info Negative Control Original data GEO bulk
28 flu over-tAPX 0.72 >More info 0.43 >More info WT Col Original data GEO bulk
29 OsSAP11 expressing -0.63 >More info -0.51 >More info WT seedlings Original data GEO bulk
30 gai Control 0.73 >More info 0.41 >More info Laer Control leaf discs Original data GEO bulk
31 Col-0 low oxygen 0.73 >More info 0.40 >More info Col-0 control low oxygen root Original data GEO bulk
32 WT H2O2 3h 0.69 >More info 0.44 >More info WT water 3h 3h_H2O2 Original data GEO bulk
33 HARAP aerobic -0.55 >More info -0.58 >More info WT aerobic aerobic Original data GEO bulk
34 WT flg22 2h 0.61 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
35 WT+chitooctaose 0.52 >More info 0.60 >More info WT+water chitooctaose seedlings Original data GEO bulk
36 seedling 6h after HZE WT 0.71 >More info 0.41 >More info seedling day 1 unirradiated WT 6h Original data
37 Selenate (root) 0.63 >More info 0.48 >More info Ws (root) Original data GEO bulk
38 Root Selenate 0.63 >More info 0.48 >More info Root control 40 micromolar selenate Root Original data GEO bulk
39 TaFLS overexpression line (OE2) -0.70 >More info -0.41 >More info Col-0 Rosette leaves Original data
40 Col-0 2HS 0.71 >More info 0.39 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
41 rosette Dark Wounded 0.64 >More info 0.46 >More info rosette Dark Control Original data GEO bulk
42 AtLysM RLK1 mutant chitooctaose -0.56 >More info -0.54 >More info WT chitooctaose Original data GEO bulk
43 Light 0.5h steady-state 0.53 >More info 0.56 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
44 abi1 hypocotyl 0.57 >More info 0.52 >More info Ler hypocotyl hypocotyl Original data GEO bulk
45 protoplasts T1 [flg22] 0.51 >More info 0.57 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
46 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.51 >More info 0.57 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
47 5-Triiodobenzoic acid3 h 0.56 >More info 0.52 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
48 root protoplasts 40 mM NaCl 0.61 >More info 0.46 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
49 Leaf wounded 0.53 >More info 0.54 >More info Leaf control vegetative leaf Original data GEO bulk
50 WT 3h -P 0.59 >More info 0.48 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
51 oligomycin 1 h 0.59 >More info 0.48 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
52 bak1-3 +Pep2 2h 0.54 >More info 0.52 >More info WT +Pep2 2h Pep2 Original data GEO bulk
53 max4 hypocotyl 0.60 >More info 0.46 >More info wt hypocotyl hypocotyl Original data GEO bulk
54 WT chitooctaose 0.53 >More info 0.53 >More info WT water Original data GEO bulk
55 til1-1 22C 0.53 >More info 0.53 >More info Col-0 22C Original data GEO bulk
56 Light 0.5h polysome-bound 0.52 >More info 0.53 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
57 Light 0.67 >More info 0.38 >More info Control Original data GEO bulk
58 WT drought 0.58 >More info 0.46 >More info WT control All aerial tissue Original data GEO bulk
59 CMP 4hr 0.69 >More info 0.35 >More info Acetone 4hr root Original data GEO bulk
60 aba1 hypocotyl 0.60 >More info 0.44 >More info Ler hypocotyl hypocotyl Original data GEO bulk
61 3x(m) 0.57 >More info 0.47 >More info 2x two week old seedlings Original data
62 9 hr Hypoxia Total RNA 0.69 >More info 0.35 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
63 WT AntimycinA 3h 0.65 >More info 0.39 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
64 chito-octamer 0.50 >More info 0.53 >More info Col Mock Original data GEO bulk
65 9 hr Hypoxia IP RNA 0.70 >More info 0.33 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
66 FLIGHT TAGESB plate6 ROOTS 0.62 >More info 0.41 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
67 P.p 6hai 0.69 >More info 0.33 >More info At-Control roots Original data GEO bulk
68 Phytoprostane A1 4 h 0.60 >More info 0.42 >More info Col-0 Original data GEO bulk
69 miR 0h 0.57 >More info 0.45 >More info Col 0h Leaf Original data GEO bulk
70 AgNO3 3 h 0.64 >More info 0.38 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
71 Heat shock optimum 0.37 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
72 BLM+INA 0.66 >More info 0.35 >More info CK BLM and INA seedling Original data
73 P.p 10.5hai 0.62 >More info 0.38 >More info At-Control roots Original data GEO bulk
74 Col-0 37C 0.59 >More info 0.41 >More info Col-0 22C Original data GEO bulk
75 shoot control pRBCS 0.58 >More info 0.41 >More info shoot control total Original data GEO bulk
76 oligomycin 4 h 0.67 >More info 0.32 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
77 seedling 12h after HZE WT 0.59 >More info 0.40 >More info seedling day 1 unirradiated WT 12h Original data
78 IMI 4mM 0.68 >More info 0.31 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
79 hai1-2 low water potential 0.61 >More info 0.37 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
80 toc1-1-57hr 0.63 >More info 0.35 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
81 coi1-2 0.57 >More info 0.40 >More info Col-0 mock Whole seedling Original data GEO bulk
82 cys-c1 root -0.61 >More info -0.36 >More info Root-WT roots Original data GEO bulk
83 seedling 24h after HZE atm-1 0.63 >More info 0.34 >More info seedling day 2 unirradiated atm-1 24h Original data
84 OsRLCK253 expressing -0.58 >More info -0.39 >More info WT seedlings Original data GEO bulk
85 A. thaliana-A. lyrata hybrid -0.59 >More info -0.38 >More info A. thaliana mature leaves before flowering Original data GEO bulk
86 roottip hypoxia total 0.65 >More info 0.32 >More info roottip control total Original data GEO bulk
87 P.syringae AvrRpt2 4 h (leaf) 0.58 >More info 0.39 >More info Mock 4 h (leaf) Original data Elicitor treatments
88 seedlings-week-old RECA1-overexpressing
transgenic		 0.57 >More info 0.40 >More info seedlings-week-old Col-0 seedlings Original data
89 MPK6 ox Shoot Hypoxia 0.65 >More info 0.32 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
90 CMP 24hr 0.69 >More info 0.28 >More info Acetone 24hr root Original data GEO bulk
91 dicamba 0.64 >More info 0.33 >More info WT mock whole seedling Original data GEO bulk
92 siliques AtHb1 control 0.45 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
93 WT 3H Cold 0.51 >More info 0.45 >More info WT control Original data GEO bulk
94 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.63 >More info 0.33 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
95 SA 0.67 >More info 0.29 >More info WT mock Whole seedling Original data GEO bulk
96 2 hr Hypoxia Total RNA 0.66 >More info 0.30 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
97 Col upon hypoxia 6 hrs 0.67 >More info 0.28 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
98 mkk1 control rep -0.56 >More info -0.39 >More info Col-0 Time 0 rep Original data GEO bulk
99 C24 ozone 0.67 >More info 0.28 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
100 CT101 ozone 0.66 >More info 0.29 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
101 anac017-2 AntimycinA 3h -0.64 >More info -0.31 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
102 pepr1-1 Pepr2-3 +Pep2 2h -0.58 >More info -0.37 >More info WT +Pep2 2h Pep2 Original data GEO bulk
103 cell culture 4 h phytoprostane A1 0.61 >More info 0.34 >More info cell culture 4 h control Original data GEO bulk
104 Salt Stress 24 h (root) 0.66 >More info 0.29 >More info Stress mock 24 h (root) Original data Stress treatments
105 root hypoxia total 0.68 >More info 0.26 >More info root control total Original data GEO bulk
106 Heat and anoxia 0.61 >More info 0.33 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
107 seedlings protease IV 0.52 >More info 0.42 >More info seedlings nontreated control whole seedling Original data
108 root Dosed gold 0.63 >More info 0.31 >More info root No gold .125 mM gold 24 h roots Original data
109 root cells stele -Fe 0.59 >More info 0.35 >More info whole roots standard Original data GEO bulk
110 Col-0 ozone 0.63 >More info 0.31 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
111 Fenclorim 4hr 0.61 >More info 0.33 >More info Acetone 4hr root Original data GEO bulk
112 DFPM 0.63 >More info 0.31 >More info control Original data GEO bulk
113 P.p 30hai 0.69 >More info 0.25 >More info At-Control roots Original data GEO bulk
114 0.125 mM gold 24 h 0.63 >More info 0.31 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
115 ataf1-1 mutant Col-0 Bgh inoculated 0.70 >More info 0.24 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
116 mkk1 24h BTH rep -0.41 >More info -0.53 >More info Col-0 24h BTH rep Original data GEO bulk
117 Col-0 wt Hypoxic 0.68 >More info 0.25 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
118 shoot hypoxia total 0.59 >More info 0.34 >More info shoot control total Original data GEO bulk
119 bak1-3 +Pep2 10h 0.61 >More info 0.32 >More info WT +Pep2 10h Pep2 Original data GEO bulk
120 Dex-rga(delta17) 2h GA4+DEX -0.63 >More info -0.30 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
121 mkk2 control rep -0.57 >More info -0.36 >More info Col-0 Time 0 rep Original data GEO bulk
122 Red/FR Light45min 0.06 >More info 0.87 >More info FarRed Light 45min Original data Light treatments
123 CLO 4mM 0.64 >More info 0.28 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
124 seedling 24h after HZE WT 0.56 >More info 0.36 >More info seedling day 2 unirradiated WT 24h Original data
125 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.64 >More info 0.28 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
126 Te ozone 0.67 >More info 0.25 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
127 IAA 12h -0.65 >More info -0.27 >More info control 12h root Original data GEO bulk
128 ein2-1 9 hpi A. brassicicola 0.60 >More info 0.32 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
129 safener treated 0.60 >More info 0.32 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
130 FLIGHT TAGES 2B plate6 HYPOCOTYLS 0.50 >More info 0.42 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
131 Ws HS 0.54 >More info 0.37 >More info Ws control heat shocked seedling Original data GEO bulk
132 Dex-rga(delta17) 4h GA4+DEX -0.63 >More info -0.28 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
133 aba3-1 0.51 >More info 0.40 >More info wt Original data GEO bulk
134 toc1-1-77hr 0.55 >More info 0.36 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
135 G3P 0.36 >More info 0.55 >More info Mock distal leaves Original data GEO bulk
136 Leafminer damaged seedlings 0.35 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
137 ckh1 CK200 0.52 >More info 0.38 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
138 coi1-16 ein2 sid2 ctrl -0.63 >More info -0.27 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
139 Whole root - low pH 12H 0.57 >More info 0.33 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
140 FLIGHT TAGESB plate 0.59 >More info 0.31 >More info GROUND CONTROL TAGESB plate Original data
141 Light 3day hml -0.32 >More info -0.58 >More info 0h hml Original data
142 ein3 eil1 0.67 >More info 0.22 >More info Col-0 mock Whole seedling Original data GEO bulk
143 Mutant siz1-3 (Drought) 0.65 >More info 0.24 >More info Col-0 (Drought) Original data GEO bulk
144 Col ozone 3h 0.52 >More info 0.37 >More info Col clean-air 3h ozone Original data GEO bulk
145 siz1-3 drought 0.65 >More info 0.24 >More info Col-0 drought Original data GEO bulk
146 rosette Light Wounded 0.57 >More info 0.32 >More info rosette Light Control Original data GEO bulk
147 coi1-16 ein2 sid2 ozone 0.60 >More info 0.29 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
148 3x(p) 0.55 >More info 0.33 >More info 2x two week old seedlings Original data
149 Bur-0-30min IAA 0.56 >More info 0.32 >More info Bur-0h IAA whole plant Original data GEO bulk
150 6h +Pi -0.63 >More info -0.25 >More info 6h -Pi root Original data GEO bulk
151 toc1-1-53hr 0.52 >More info 0.36 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
152 WT flg22 1h 0.59 >More info 0.29 >More info WT 0h Leaf tissue Original data GEO bulk
153 ORS1 induced 0.55 >More info 0.32 >More info mock-induced rosette leaves Original data GEO bulk
154 seedling 1.5h after Gamma WT 0.55 >More info 0.32 >More info seedling day 1 unirradiated WT 1.5h Original data
155 mutant-line409 -0.35 >More info -0.52 >More info WT-control whole plant Original data GEO bulk
156 CDB1-Knockout -0.27 >More info -0.60 >More info WT Original data GEO bulk
157 Col-Luc WT 3h antimycin A 0.57 >More info 0.30 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
158 8hr-pH4.5 0.55 >More info 0.31 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
159 AvrRpt2 Col-0 6hpi 0.68 >More info 0.18 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
160 auxin and brassinazole seedlings 0.56 >More info 0.30 >More info auxin seedlings Original data GEO bulk
161 root callus inducing medium 48 h -0.63 >More info -0.23 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
162 atr mock 0.51 >More info 0.35 >More info WT mock shoot apical meristem Original data
163 whole roots 140 mM NaCl 1 hour 0.55 >More info 0.30 >More info whole roots standard Original data GEO bulk
164 amiRAP aerobic -0.51 >More info -0.34 >More info WT aerobic aerobic Original data GEO bulk
165 upf3 0.52 >More info 0.33 >More info WT whole plant Original data GEO bulk
166 WT NAA/flg 1h 0.60 >More info 0.25 >More info WT 0h Leaf tissue Original data GEO bulk
167 Col-0 9 hpi A. brassicicola 0.61 >More info 0.24 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
168 rdr6-15 -0.63 >More info -0.22 >More info Col-0 Original data GEO bulk
169 root callus inducing medium 24h -0.59 >More info -0.26 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
170 WT Col-0 Bgh inoculated 0.64 >More info 0.21 >More info WT Col-0 Un-inoculated Original data GEO bulk
171 Cor 24h 0.56 >More info 0.28 >More info Mock 24h Cor Original data GEO bulk
172 Triazolopyrimidine EC50 0.56 >More info 0.28 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
173 Ibuprofen 3 h 0.32 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
174 root cells cortex -Fe 0.58 >More info 0.26 >More info whole roots standard Original data GEO bulk
175 R. solani AG8 0.58 >More info 0.26 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
176 vte2-1 3d vernalization 0.54 >More info 0.29 >More info WT 3d vernalization Original data GEO bulk
177 WT Shoot Hypoxia 0.63 >More info 0.20 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
178 rcf1-1 cold 0h 0.54 >More info 0.29 >More info WT cold 0h Control seedlings Original data GEO bulk
179 anac017-2 water 3h 0.30 >More info 0.53 >More info WT water 3h 3h_water Original data GEO bulk
180 Primisulfuron EC50 0.58 >More info 0.25 >More info Carrier (primisulfuron) Original data GEO bulk
181 sng1 UV 0.58 >More info 0.25 >More info UV aerial region Original data GEO bulk
182 GR::bZIP1 +CHX +N +DEX -0.61 >More info -0.22 >More info GR::bZIP1 empty vector control +CHX +N +DEX 1 µM DEX in Ethanol Original data
183 miR393 flg22 1h 0.53 >More info 0.29 >More info WT 0h Leaf tissue Original data GEO bulk
184 bHLH122 ox -0.54 >More info -0.28 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
185 Phaseolicola 2 h (leaf) 0.58 >More info 0.24 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
186 UV 0.59 >More info 0.23 >More info WT aerial region Original data GEO bulk
187 35S:RPS4 eds1-2 8h -0.59 >More info -0.23 >More info 35S:RPS4 8h leaves Original data
188 ckh1 CK0 0.52 >More info 0.29 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
189 WT 2-4h Xanthomonas 0.63 >More info 0.18 >More info WT T0 Original data GEO bulk
190 ein5-1 ski2-3 0.52 >More info 0.29 >More info Col-0 aerial tissue Original data
191 SAM SE 35S:AGL15 0.61 >More info 0.20 >More info SAM SE Col Original data GEO bulk
192 1h +Pi -0.54 >More info -0.27 >More info 1h -Pi root Original data GEO bulk
193 root cells columella root cap -Fe 0.55 >More info 0.26 >More info whole roots standard Original data GEO bulk
194 cat2-short-day 2d 0.50 >More info 0.31 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
195 FLIGHT TAGESB plate6 SHOOTS 0.56 >More info 0.25 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
196 MPK6 ox Root Hypoxia 0.55 >More info 0.26 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
197 2hr transitory KNO3 PeR cell -0.31 >More info -0.50 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
198 CMV-A2b mutant 0.57 >More info 0.24 >More info Mock-At Aerial tissues Original data GEO bulk
199 vtc2 mature somatic embryo 0.57 >More info 0.24 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
200 rao1-2 3h antimycin A -0.53 >More info -0.27 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
201 BLM 0.50 >More info 0.30 >More info CK BLM seedling Original data
202 camta2/3 warm 0.56 >More info 0.24 >More info WT warm entire aerial part Original data GEO bulk
203 -Sulfate 2 h 0.54 >More info 0.26 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
204 UV Stress 24 h (shoot) 0.65 >More info 0.15 >More info Stress mock 24 h (shoot) Original data Stress treatments
205 ani1 T16 -0.64 >More info -0.16 >More info WT T16 root tissue Original data GEO bulk
206 WT-SA 0.54 >More info 0.26 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
207 root cells -Fe 0.52 >More info 0.28 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
208 root callus inducing medium 96 h -0.60 >More info -0.20 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
209 Sulfometuron EC50 0.55 >More info 0.25 >More info Carrier Original data GEO bulk
210 Bur-0-1h IAA 0.60 >More info 0.20 >More info Bur-0h IAA whole plant Original data GEO bulk
211 Laer pretreat GA+JA Flg22 0h 0.57 >More info 0.23 >More info Laer pretreat water control leaf discs Original data GEO bulk
212 plant (tga2-5-6) 4h OPDA 0.58 >More info 0.22 >More info plant (tga2-5-6) 4h control Original data GEO bulk
213 upf1 0.54 >More info 0.25 >More info WT whole plant Original data GEO bulk
214 low CO2 + light 0.56 >More info 0.23 >More info normal CO2 + light Original data GEO bulk
215 atr mitomycin C 0.51 >More info 0.28 >More info WT mitomycin C shoot apical meristem Original data
216 downy mildew cotyledons late stage 0.67 >More info 0.12 >More info mock inoculated Cotyledons Original data GEO bulk
217 psad1-1 stn7-1 -0.60 >More info -0.19 >More info Col-0 rosette leaves Original data GEO bulk
218 protoplasted roots pH4.6 0.52 >More info 0.27 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
219 A. lyrata -0.58 >More info -0.21 >More info A. thaliana mature leaves before flowering Original data GEO bulk
220 Nicotinamide-57hr 0.57 >More info 0.22 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
221 Col-0 Root 100 mM ATP 30 min 0.50 >More info 0.28 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
222 gpa1-4/agb1-2 ozone 3h 0.54 >More info 0.24 >More info Col ozone 3h ozone Original data GEO bulk
223 2hr transitory KNO3 PrR cell 0.55 >More info 0.23 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
224 camta1/2/3 warm 0.55 >More info 0.23 >More info WT warm entire aerial part Original data GEO bulk
225 AFB1 flg22 1h 0.53 >More info 0.25 >More info WT 0h Leaf tissue Original data GEO bulk
226 Laer pretreat GA Flg22 1h 0.07 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
227 wrky33 Bc inoculation 14h 0.64 >More info 0.13 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
228 phyB Rc50 0.60 >More info 0.17 >More info WT(Ler) Rc50 Original data GEO bulk
229 SCR-GR Time 1H Dex 0.53 >More info 0.24 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
230 Bur-0-3h IAA 0.51 >More info 0.26 >More info Bur-0h IAA whole plant Original data GEO bulk
231 sid2-2 9 hpi A. brassicicola 0.54 >More info 0.23 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
232 root cells epidermis and lateral root cap -Fe 0.50 >More info 0.27 >More info whole roots standard Original data GEO bulk
233 DC3000 24h 0.50 >More info 0.27 >More info Mock 24h DC3000 Original data GEO bulk
234 Full C2 T3 -0.17 >More info -0.60 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
235 npr1-1 SA -0.61 >More info -0.15 >More info Col-0 SA complete seedling Original data
236 IAA Treated -0.51 >More info -0.25 >More info Negative Control Original data GEO bulk
237 ARR22-ox (t-zeatin 3 h) 0.55 >More info 0.21 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
238 2 hr Hypoxia IP RNA 0.62 >More info 0.13 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
239 FHY3p dark+DEX -0.57 >More info -0.18 >More info FHY3p dark+mock Original data GEO bulk
240 FarRed Light 45min -0.02 >More info -0.73 >More info White Light 45min Original data Light treatments
241 AvrRpm1 2 h (leaf) 0.58 >More info 0.16 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
242 pad4-PsmES4326-24hpi -0.59 >More info -0.15 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
243 (Ws-2)+100 uM As 0.53 >More info 0.21 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
244 Botrytis cinerea 48h 0.52 >More info 0.22 >More info control 48h Original data GEO bulk
245 LTN008-2 aza-dc 0.57 >More info 0.17 >More info LTN012-2 Mock Original data
246 Col-0 C2H4 24h 0.52 >More info 0.22 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
247 shoot control pGL2 0.51 >More info 0.23 >More info shoot control total Original data GEO bulk
248 camta1/3 warm 0.54 >More info 0.19 >More info WT warm entire aerial part Original data GEO bulk
249 vtc1 (II) 0.50 >More info 0.23 >More info Col (II) rosette Original data GEO bulk
250 gul2-1 bri1-5 mutant 0.65 >More info 0.08 >More info WT 7 day-old whole seedlings Original data
251 RRE1 Chitin 0.56 >More info 0.16 >More info Chitin Original data GEO bulk
252 TaFLS overexpression line (OE1) -0.67 >More info -0.05 >More info Col-0 Rosette leaves Original data
253 Laer Flg22 1h 0.64 >More info 0.08 >More info Laer Control leaf discs Original data GEO bulk
254 RRE2 Chitin 0.52 >More info 0.20 >More info Chitin Original data GEO bulk
255 Col-0 INA 48h 0.50 >More info 0.22 >More info Col-0 MOCK 48h Original data GEO bulk
256 Col-0 under 4 days salt 0.53 >More info 0.19 >More info Col-0 under control 4 days salt treatment rosette Original data
257 WT Bc inoculation 14h 0.60 >More info 0.12 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
258 Col leaf 100mM NaCl 0.52 >More info 0.20 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
259 Col leaf 100mM NaCl 0.52 >More info 0.20 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
260 Col 100mM NaCl 0.52 >More info 0.20 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
261 Laer Flg22+GA 2h 0.60 >More info 0.12 >More info Laer Control leaf discs Original data GEO bulk
262 1.5 hr ammonium 0.54 >More info 0.18 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
263 Laer Flg22+GA 1h 0.58 >More info 0.14 >More info Laer Control leaf discs Original data GEO bulk
264 root cells endodermis and quiescent center -Fe 0.52 >More info 0.20 >More info whole roots standard Original data GEO bulk
265 TA induced 0.50 >More info 0.22 >More info Methanol TA Suspension cells Original data GEO bulk
266 csn5 (csn5a-2 csn5b) light 0.50 >More info 0.22 >More info WT light Original data GEO bulk
267 Cor 10h 0.52 >More info 0.20 >More info Mock 10h Cor Original data GEO bulk
268 ckh1 CK25 0.54 >More info 0.18 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
269 bbx24 in Simulated Shade -0.60 >More info -0.11 >More info WT in simulated shade shade seedling Original data
270 Nicotinamide-65hr 0.52 >More info 0.19 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
271 Differentiation 48h -0.51 >More info -0.20 >More info Differentiation 0h leaves Original data
272 IAA7mII over-expressor IAA Treated 0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
273 Elevated CO2 AMPLE N NIGHT 0.56 >More info 0.14 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
274 R. solani AG2-1 0.53 >More info 0.17 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
275 tbf1-elf18 -0.56 >More info -0.14 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
276 seedling 6h after HZE atm-1 0.57 >More info 0.13 >More info seedling day 1 unirradiated atm-1 6h Original data
277 tbf1-mock infiltration -0.50 >More info -0.20 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
278 rcf1-1 cold 24h 0.53 >More info 0.16 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
279 GST NPP1 4 h (leaf) 0.54 >More info 0.15 >More info Mock 4 h (leaf) Original data Elicitor treatments
280 GR::bZIP1 +CHX -N +DEX -0.53 >More info -0.16 >More info empty vector control +CHX -N +DEX 1 µM DEX in Ethanol Original data
281 2hr transitory KNO3 SR cell 0.53 >More info 0.16 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
282 Fenclorim 24hr 0.57 >More info 0.12 >More info Acetone 24hr root Original data GEO bulk
283 AtGATA2ox 0.59 >More info 0.10 >More info Col seedling Original data GEO bulk
284 shoots bhlh100/101 0uM Fe 0.54 >More info 0.14 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
285 JA 0.52 >More info 0.16 >More info Col-0 mock Whole seedling Original data GEO bulk
286 col-5 DC3000-avrRpm 4h 0.52 >More info 0.16 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
287 35S::RSL4 -0.15 >More info -0.53 >More info Col-0 Control root Original data GEO bulk
288 Col BTH 0.01 >More info 0.67 >More info Col rosettes Original data GEO bulk
289 Imidazolinone EC50 0.50 >More info 0.17 >More info Carrier (Imidazolinone) Original data GEO bulk
290 dde2-2 9 hpi A. brassicicola 0.56 >More info 0.11 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
291 mbd11 mutant thaliana 10-day-old seedling 0.55 >More info 0.11 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
292 anac017-1 H2O2 3h -0.54 >More info -0.12 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
293 smg7b-1 0.53 >More info 0.13 >More info WT whole plant Original data GEO bulk
294 WT-NOCO2 INFECTED 0.50 >More info 0.16 >More info WT-MOCK Original data GEO bulk
295 1 h Light Total RNA -0.51 >More info -0.15 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
296 cov1 cov2 stem Base 0.57 >More info 0.09 >More info WT stem Base stem Base Original data GEO bulk
297 Elevated CO2 fully expanded leaf 0.50 >More info 0.15 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
298 Col-0 WT HL 3h 0.54 >More info 0.11 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
299 Nicotinamide-53hr 0.52 >More info 0.13 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
300 GO5; 8h switch to ambient CO2 concentrations; 0.51 >More info 0.14 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
301 mbd4 mutant thaliana 10-day-old seedling 0.54 >More info 0.10 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
302 JMJ24 knockout -0.50 >More info -0.14 >More info WT Original data GEO bulk
303 SCR-GR Time 3H Dex 0.51 >More info 0.13 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
304 seed germinating in countinuous light 24h SL -0.03 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
305 SA 4mM 0.57 >More info 0.07 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
306 desiccated mature pollen grains -0.07 >More info -0.56 >More info hydrated pollen grains Original data GEO bulk
307 ceh1 mutant 0.54 >More info 0.09 >More info Parent line Original data
308 col-5 hrpA 12h 0.51 >More info 0.12 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
309 Col-0-avrB-6h 0.55 >More info 0.07 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
310 Pst-DC3000(avrRpm1)-4hpi 0.50 >More info 0.12 >More info Pst-DC3000-4hpi Original data GEO bulk
311 SOS1 0mM NaCl 0.50 >More info 0.12 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
312 tfl1-1-23ºC 0.53 >More info 0.09 >More info WT-23ºC Original data GEO bulk
313 CMV-WT 0.50 >More info 0.11 >More info Mock-At Aerial tissues Original data GEO bulk
314 stn7-1 -0.64 >More info 0.03 >More info Col-0 rosette leaves Original data GEO bulk
315 IXB induced 0.50 >More info 0.11 >More info Methanol IXB Suspension cells Original data GEO bulk
316 Col-0 24hpi A. brassicicola 0.59 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
317 Nicotinamide-73hr 0.50 >More info 0.11 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
318 efr-1 +elf18 10h -0.50 >More info -0.10 >More info WT +elf18 10h elf18 Original data GEO bulk
319 Atss3 Light4 -0.52 >More info -0.07 >More info Atss3 Dark0.5 Original data GEO bulk
320 S58-2 0.50 >More info 0.09 >More info wt Original data GEO bulk
321 pmr5 0.51 >More info 0.08 >More info Col-0 rosette Original data GEO bulk
322 penta MeJA 1h 0.61 >More info -0.03 >More info Laer MeJA 1h leaf discs Original data GEO bulk
323 Atwrky63 -0.54 >More info -0.03 >More info Col0 none leaf Original data GEO bulk
324 K starvation (root) 0.50 >More info 0.07 >More info Ws (root) Original data GEO bulk
325 Roots Cd -0.61 >More info 0.04 >More info Roots control Cd Root Original data GEO bulk
326 Root -K 0.50 >More info 0.06 >More info Control-root Original data GEO bulk
327 B.cinerea 18 h infection 0.53 >More info 0.03 >More info Mock 18 h Original data Botrytis cinerea infection
328 Botrytis cinerea 18h 0.53 >More info 0.03 >More info control 18h Original data GEO bulk
329 HairpinZ 4 h (leaf) 0.59 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
330 ataf1-1 mutant Col-0 Un-inoculated -0.57 >More info 0.01 >More info WT Col-0 Un-inoculated Original data GEO bulk
331 Col PSTDC3000 24h 0.68 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
332 SCR-GR Time 12H Dex 0.55 >More info -0.00 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
333 camta3-2 0.52 >More info 0.02 >More info WT Original data GEO bulk
334 seedling 3h after HZE WT 0.51 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
335 Ts5 roots 2hr KCl control 0.50 >More info 0.03 >More info Col0 roots 2hr KCl control root Original data GEO bulk
336 GST 4 h (leaf) 0.52 >More info 0.01 >More info Mock 4 h (leaf) Original data Elicitor treatments
337 Col-0 SA 0.55 >More info -0.03 >More info Col-0 Original data GEO bulk
338 seedling 30 min S Exp -0.54 >More info 0.03 >More info seedling -S Exp seedling Original data
339 bri1-116 -0.22 >More info 0.73 >More info Col seedling Original data GEO bulk
340 Laer Flg22 2h 0.54 >More info -0.05 >More info Laer Control leaf discs Original data GEO bulk
341 msh1 albino 0.52 >More info -0.03 >More info WT aerial part Original data GEO bulk
342 Shoot apex inflorescence (after bolting) -0.16 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
343 CCA1-ox 6am non-polysomal -0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
344 10min Reillumination Total RNA -0.50 >More info 0.05 >More info 1h Dark Total RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
345 GST-overexpression seedlings control 0.56 >More info -0.19 >More info WT seedlings control Seedlings Original data
346 Cs shoot 0.13 >More info -0.50 >More info control shoot Original data GEO bulk
347 P. infestans 6 h (leaf) 0.50 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
348 +1.6 mM Tween 20 1 h. 0.57 >More info -0.22 >More info +distilled water 1 h. Original data GEO bulk
349 0h hml 0.62 >More info -0.39 >More info 0h wt Original data