4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on IRP1-OE-Fe--shoot
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "IRP1-OE-Fe--shoot"  Help Download transcriptome of top 30
Score Experiment Correlation from
IRP1-OE-Fe--shoot		 Correlation to
IRP1-OE-Fe--shoot		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 IRP1-OE-Fe--shoot 1.00 >More info 1.00 >More info COL-0-Fe--shoot shoot Original data
2 IRP1-OE-Ctrl--shoot 0.90 >More info 0.86 >More info COL-0-Ctrl--shoot shoot Original data
3 hrpA fliC 7h 0.70 >More info 0.81 >More info Mock 7h hrpA fliC Original data GEO bulk
4 treated group 0.71 >More info 0.75 >More info Control group Original data
5 del1-1 mutant 5d uninfected 0.73 >More info 0.73 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
6 albino Ds13-2198-1 -0.71 >More info -0.75 >More info control Original data GEO bulk
7 gh3.5-1D 48 hpi 0.76 >More info 0.70 >More info Col-0 uninoculated Original data GEO bulk
8 col-5 hrpA 12h 0.71 >More info 0.75 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
9 WT-NOCO2 INFECTED 0.74 >More info 0.71 >More info WT-MOCK Original data GEO bulk
10 Leafminer locally damaged thaliana seedlings 0.72 >More info 0.68 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
11 E.coli 0157 H7 7h 0.68 >More info 0.71 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
12 Mature callus 0.72 >More info 0.67 >More info Young callus hypocotyls Original data GEO bulk
13 hrpA 7h 0.69 >More info 0.69 >More info Mock 7h hrpA Original data GEO bulk
14 ASL9-ox -0.74 >More info -0.64 >More info WT aerial parts of seedlings Original data GEO bulk
15 Shoot -Cs 0.60 >More info 0.76 >More info Control-shoot Original data GEO bulk
16 ice1 6H Cold 0.61 >More info 0.75 >More info WT 6H Cold Original data GEO bulk
17 B.cinerea 18 h infection 0.64 >More info 0.72 >More info Mock 18 h Original data Botrytis cinerea infection
18 Botrytis cinerea 18h 0.64 >More info 0.72 >More info control 18h Original data GEO bulk
19 cpr5scv1 0.66 >More info 0.68 >More info WT(COL) Original data GEO bulk
20 IMI 4mM 0.70 >More info 0.64 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
21 Col-0 48 hpi 0.64 >More info 0.69 >More info Col-0 uninoculated Original data GEO bulk
22 E.coli TUV86 2 fliC 7h 0.65 >More info 0.67 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
23 cpr5npr1 0.66 >More info 0.66 >More info WT(COL) Original data GEO bulk
24 pvip1 pvip2 0.73 >More info 0.59 >More info Col-0 whole rosettes Original data GEO bulk
25 WT 2-4h Xanthomonas 0.56 >More info 0.75 >More info WT T0 Original data GEO bulk
26 Pto inoculated 0.64 >More info 0.67 >More info col Original data GEO bulk
27 HopZ1a treated 0.66 >More info 0.65 >More info col Original data GEO bulk
28 cpr5 0.68 >More info 0.62 >More info WT(COL) Original data GEO bulk
29 ice1 control 0.61 >More info 0.69 >More info WT control Original data GEO bulk
30 cpr5npr1svi1 0.60 >More info 0.70 >More info WT(COL) Original data GEO bulk
31 AvrRpm1 2 h (leaf) 0.53 >More info 0.76 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
32 Col-0 Flg22 4h 0.54 >More info 0.75 >More info Col-0 H2O 4h Original data GEO bulk
33 HopZ1a treated ulp1c ulp1d 0.64 >More info 0.65 >More info col Original data GEO bulk
34 Leafminer damaged seedlings 0.72 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
35 Botrytis cinerea 48h 0.63 >More info 0.64 >More info control 48h Original data GEO bulk
36 Mutant gh3.5-1D (AvrRpt2) 0.71 >More info 0.56 >More info Col-0 (AvrRpt2) Original data GEO bulk
37 Col ozone 2d 0.67 >More info 0.60 >More info Col clean-air 2d ozone Original data GEO bulk
38 mkk1/mkk2 24h BTH rep 0.67 >More info 0.60 >More info Col-0 24h BTH rep Original data GEO bulk
39 GST NPP1 4 h (leaf) 0.58 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
40 ceh1 mutant 0.60 >More info 0.66 >More info Parent line Original data
41 Elevated CO2 AMPLE N DAY 0.63 >More info 0.63 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
42 Col-0-avrB-6h 0.59 >More info 0.67 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
43 35S:RPS4 eds1-2 24h -0.60 >More info -0.65 >More info 35S:RPS4 24h leaves Original data
44 Col0-PsmES4326-24hpi 0.64 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
45 SLWF infested 0.60 >More info 0.65 >More info SLWF uninfested rosette tissue Original data GEO bulk
46 edr1 36 h powdery mildew 0.68 >More info 0.56 >More info Col-0 36 h powdery mildew Original data GEO bulk
47 Laer pretreat GA Flg22 1h 0.53 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
48 vtc2 (I) 0.63 >More info 0.61 >More info Col (I) rosette Original data GEO bulk
49 hrcC 0.57 >More info 0.67 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
50 ERF96OE 0.58 >More info 0.66 >More info WT leaf Original data
51 rosette Dark Wounded 0.52 >More info 0.71 >More info rosette Dark Control Original data GEO bulk
52 pmr5 pmr6 0.60 >More info 0.63 >More info Col-0 Original data GEO bulk
53 efr-1 +elf18 10h -0.60 >More info -0.63 >More info WT +elf18 10h elf18 Original data GEO bulk
54 Cor hrpS 10h 0.60 >More info 0.63 >More info Mock 10h Cor hrpS Original data GEO bulk
55 CMP 24hr 0.64 >More info 0.59 >More info Acetone 24hr root Original data GEO bulk
56 edr1 18 h powdery mildew 0.63 >More info 0.60 >More info Col-0 18 h powdery mildew Original data GEO bulk
57 ein2-1 9 hpi A. brassicicola 0.56 >More info 0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
58 WT +elf18 10h 0.62 >More info 0.59 >More info WT untreated elf18 Original data GEO bulk
59 Col-0 9 hpi A. brassicicola 0.58 >More info 0.63 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
60 del1-1 5dpi 0.48 >More info 0.73 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
61 CMV-WT 0.60 >More info 0.60 >More info Mock-At Aerial tissues Original data GEO bulk
62 smg7b-1 0.61 >More info 0.59 >More info WT whole plant Original data GEO bulk
63 mpk6-ko Flg22 4h 0.53 >More info 0.66 >More info mpk6-ko H2O 4h Original data GEO bulk
64 coi1-16 ein2 sid2 ctrl -0.65 >More info -0.54 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
65 Col whole leaf 7dpi 0.55 >More info 0.63 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
66 Flagellin 4 h (leaf) 0.50 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
67 mkk1/mkk2 control rep 0.63 >More info 0.55 >More info Col-0 Time 0 rep Original data GEO bulk
68 DC3000 24h 0.51 >More info 0.67 >More info Mock 24h DC3000 Original data GEO bulk
69 S58-2 0.60 >More info 0.58 >More info wt Original data GEO bulk
70 penta Alternaria 3dpi 0.69 >More info 0.49 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
71 Col-0 under 4 days salt 0.59 >More info 0.58 >More info Col-0 under control 4 days salt treatment rosette Original data
72 Col-0 V. longisporum-inoculated 48 hpi 0.59 >More info 0.58 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
73 lht1 PstDC3000 48h 0.65 >More info 0.52 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
74 upf3 0.60 >More info 0.57 >More info WT whole plant Original data GEO bulk
75 Shoot -K 0.56 >More info 0.61 >More info Control-shoot Original data GEO bulk
76 K starvation (shoot) 0.56 >More info 0.61 >More info Ws (shoot) Original data GEO bulk
77 35S::ERF104 Flg22 4h 0.54 >More info 0.62 >More info 35S::ERF104 H2O 4h Original data GEO bulk
78 Col BTH 0.49 >More info 0.67 >More info Col rosettes Original data GEO bulk
79 Leafminer systemically damaged thaliana seedlings 0.50 >More info 0.65 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
80 ataf1-1 mutant Col-0 Bgh inoculated 0.56 >More info 0.59 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
81 npr1-1 SA -0.63 >More info -0.51 >More info Col-0 SA complete seedling Original data
82 IRP1-OE-Fe--root 0.61 >More info 0.53 >More info COL-0-Fe--root root Original data
83 anac017-2 water 3h -0.66 >More info -0.48 >More info WT water 3h 3h_water Original data GEO bulk
84 bio4-1 mutant watered00µM biotin leaves -0.58 >More info -0.56 >More info bio4-1 mutant leaves leaves Original data GEO bulk
85 camta1/2/3 warm 0.60 >More info 0.54 >More info WT warm entire aerial part Original data GEO bulk
86 cs26 long day 0.53 >More info 0.61 >More info Leaves-WT-LD leaf Original data GEO bulk
87 Phaseolicola 2 h (leaf) 0.44 >More info 0.70 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
88 msh1 albino 0.58 >More info 0.55 >More info WT aerial part Original data GEO bulk
89 ice1 24H Cold 0.59 >More info 0.54 >More info WT 24H Cold Original data GEO bulk
90 apk1 apk2 0.54 >More info 0.59 >More info Col0-control whole rosette Original data GEO bulk
91 anac017-2 AntimycinA 3h -0.55 >More info -0.58 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
92 Col-0 ozone 0.62 >More info 0.51 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
93 DFPM 0.54 >More info 0.59 >More info control Original data GEO bulk
94 S15-118 0.52 >More info 0.61 >More info wt Original data GEO bulk
95 seedlings-week-old RECA1-overexpressing
transgenic		 0.55 >More info 0.58 >More info seedlings-week-old Col-0 seedlings Original data
96 col-5 DC3000 12h 0.62 >More info 0.51 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
97 gh3.5D uninoculated -0.50 >More info -0.63 >More info Col-0 48 hpi Original data GEO bulk
98 abi4 vtc2 (I) 0.58 >More info 0.55 >More info Col (I) rosette Original data GEO bulk
99 Col-0 SA 0.48 >More info 0.65 >More info Col-0 Original data GEO bulk
100 gpa1-4/agb1-2 ozone 2d -0.61 >More info -0.51 >More info Col ozone 2d ozone Original data GEO bulk
101 Te ozone 0.59 >More info 0.53 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
102 lht1 untreated 0.63 >More info 0.49 >More info WT untreated untreated leaf Original data GEO bulk
103 OH1 0.62 >More info 0.50 >More info Col-0 leaves Original data GEO bulk
104 camta1/3 warm 0.42 >More info 0.70 >More info WT warm entire aerial part Original data GEO bulk
105 cpr5 0.56 >More info 0.55 >More info WT seedling Original data GEO bulk
106 WT Shoot Hypoxia 0.43 >More info 0.68 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
107 CLO 4mM 0.61 >More info 0.50 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
108 CAX1/CAX3 mutant 0.54 >More info 0.57 >More info Col whole plant Original data GEO bulk
109 WT powdery mildew 0.53 >More info 0.58 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
110 IAA Treated -0.57 >More info -0.54 >More info Negative Control Original data GEO bulk
111 Mutant iaa17-6 0.50 >More info 0.60 >More info Col Original data GEO bulk
112 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.62 >More info 0.48 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
113 Ba1 UV 0.55 >More info 0.55 >More info Ba1 mock UV seedling Original data
114 col-5 DC3000-avrRpm 4h 0.59 >More info 0.51 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
115 cop1 Seedling BL 0.54 >More info 0.56 >More info WT Seedling BL Original data GEO bulk
116 MPK6 ox Shoot Hypoxia 0.54 >More info 0.56 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
117 35S:RPS4 eds1-2 8h -0.56 >More info -0.54 >More info 35S:RPS4 8h leaves Original data
118 bak1-3 +Pep2 10h 0.49 >More info 0.61 >More info WT +Pep2 10h Pep2 Original data GEO bulk
119 sid2-1 cold -0.43 >More info -0.67 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
120 anac017-2 H2O2 3h -0.66 >More info -0.43 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
121 Nicotinamide-73hr 0.60 >More info 0.49 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
122 erf104-ko Flg22 4h 0.48 >More info 0.61 >More info erf104-ko H2O 4h Original data GEO bulk
123 IRP1-OE-Ctrl--root 0.49 >More info 0.60 >More info COL-0-Ctrl--root root Original data
124 CeO2 germinant -0.47 >More info -0.62 >More info Millipore Water germinant CeO2 seedling Original data
125 wrky33 Bc inoculation 14h 0.64 >More info 0.44 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
126 anac017-1 H2O2 3h -0.67 >More info -0.41 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
127 D2O 0.61 >More info 0.47 >More info H2O seedling Original data GEO bulk
128 Laer Flg22 2h 0.55 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
129 DC3000 2 h (leaf) 0.48 >More info 0.60 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
130 wavy 0.55 >More info 0.52 >More info WT Original data GEO bulk
131 WT Bc inoculation 14h 0.62 >More info 0.45 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
132 miR393 0h -0.43 >More info -0.64 >More info WT 0h Leaf tissue Original data GEO bulk
133 cs26 short-day -0.48 >More info -0.59 >More info Leaves-WT-SD leaf Original data GEO bulk
134 1 h Light IP RNA -0.51 >More info -0.55 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
135 pnp1-1 3h +P 0.63 >More info 0.43 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
136 camta1/2/3 24h cold 0.53 >More info 0.53 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
137 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.58 >More info 0.48 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
138 GO5; harvested 8h continiously maintained in high
CO2;		 -0.65 >More info -0.41 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
139 SA 4mM 0.60 >More info 0.46 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
140 AgNO3 3 h 0.49 >More info 0.57 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
141 IAA7mII over-expressor IAA Treated 0.37 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
142 COL-0-Fe--shoot -0.28 >More info -0.78 >More info COL-0-Ctrl--shoot shoot Original data
143 Elevated CO2 fully expanded leaf 0.50 >More info 0.55 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
144 PAHs stress 0.60 >More info 0.45 >More info exp control phenanthrene whole plants Original data GEO bulk
145 RPL18 TuMV inoculated total RNA 0.60 >More info 0.44 >More info mock inoculated total RNA PO Original data GEO bulk
146 coi1-16 ein2 sid2 ozone 0.60 >More info 0.44 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
147 safener treated 0.54 >More info 0.50 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
148 gpa1 +ABA GC -0.56 >More info -0.48 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
149 Lipopolysaccaride4 h (leaf) 0.39 >More info 0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
150 Col whole leaf 5dpi 0.45 >More info 0.59 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
151 pepr1-1 Pepr2-3 +Pep2 2h -0.46 >More info -0.58 >More info WT +Pep2 2h Pep2 Original data GEO bulk
152 WT seedlings IAA -0.40 >More info -0.64 >More info WT seedlings control Seedlings Original data GEO bulk
153 bio4-1 mutant leaves 0.59 >More info 0.44 >More info WT leaves leaves Original data GEO bulk
154 Nicotinamide-69hr 0.55 >More info 0.48 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
155 LTN008-2 aza-dc 0.61 >More info 0.42 >More info LTN012-2 Mock Original data
156 4d red light grown hmr-5 seedlings 0.63 >More info 0.40 >More info 4d red light grown WT(Col-0) seedlings Original data
157 P.syringae AvrRpt2 4 h (leaf) 0.49 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
158 GST 4 h (leaf) 0.30 >More info 0.73 >More info Mock 4 h (leaf) Original data Elicitor treatments
159 ice1 3H Cold 0.61 >More info 0.41 >More info WT 3H Cold Original data GEO bulk
160 vte2-1 3d vernalization 0.54 >More info 0.48 >More info WT 3d vernalization Original data GEO bulk
161 OE WRKY40.4 high light 0.52 >More info 0.50 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
162 Fenclorim 4hr 0.49 >More info 0.53 >More info Acetone 4hr root Original data GEO bulk
163 AvrRpt2 Col-0 6hpi 0.60 >More info 0.41 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
164 Mutant coi1(leaf) -0.60 >More info -0.41 >More info Col-0 (leaf) Original data GEO bulk
165 pnp1-1 1wk +P 0.58 >More info 0.43 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
166 tunicamycin -0.45 >More info -0.56 >More info DMF Original data GEO bulk
167 Col-0 INA 48h 0.35 >More info 0.66 >More info Col-0 MOCK 48h Original data GEO bulk
168 coi1-2 0.49 >More info 0.52 >More info Col-0 mock Whole seedling Original data GEO bulk
169 bHLH122 ox -0.39 >More info -0.62 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
170 seedlings protease IV 0.42 >More info 0.59 >More info seedlings nontreated control whole seedling Original data
171 mbd6 mutant thaliana 10-day-old seedling 0.51 >More info 0.49 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
172 col-5 hrpA 2h 0.61 >More info 0.39 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
173 bZIP1ko mutant N+Light- 0.43 >More info 0.57 >More info WT-sib N+Light- whole plant Original data GEO bulk
174 Heat shock optimum 0.35 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
175 A6 mutant 0.56 >More info 0.43 >More info WT rosette leaves Rosette leaves Original data GEO bulk
176 sfr3 cold 0.60 >More info 0.39 >More info WT cold All aerial tissue Original data GEO bulk
177 20d after anthesis 0.50 >More info 0.49 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
178 UV Stress 24 h (shoot) 0.38 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
179 WT Col-0 Bgh inoculated 0.44 >More info 0.55 >More info WT Col-0 Un-inoculated Original data GEO bulk
180 Col-0 INA 6d 0.44 >More info 0.55 >More info Col-0 MOCK 6d Original data GEO bulk
181 Ws leaf 100mM NaCl 0.45 >More info 0.54 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
182 Bay-0-1h IAA -0.42 >More info -0.57 >More info Bay-0-0h IAA whole plant Original data GEO bulk
183 Ws 100mM NaCl 0.45 >More info 0.54 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
184 Dex-rga(delta17) 4h GA4 -0.40 >More info -0.59 >More info Vector 4h GA4 shoots Original data GEO bulk
185 Elevated CO2 AMPLE N NIGHT 0.43 >More info 0.56 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
186 CT101 ozone 0.54 >More info 0.44 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
187 RPL18 TuMV inoculated polysomal RNA 0.56 >More info 0.42 >More info mock inoculated polysomal RNA PO Original data GEO bulk
188 mil4 BTH 0.50 >More info 0.48 >More info Col BTH rosettes Original data GEO bulk
189 scrm-D 0.59 >More info 0.39 >More info Col-0 WT whole seedling Original data GEO bulk
190 dor drought 0.50 >More info 0.48 >More info WT drought Original data GEO bulk
191 ARR22-ox 0.50 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
192 vtc1 (II) 0.51 >More info 0.47 >More info Col (II) rosette Original data GEO bulk
193 35S-MIF1 light grown 0.64 >More info 0.34 >More info Light-grown WT control Original data GEO bulk
194 sid2-2 9 hpi A. brassicicola 0.51 >More info 0.47 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
195 Pst-DC3000(avrRpm1)-4hpi 0.38 >More info 0.60 >More info Pst-DC3000-4hpi Original data GEO bulk
196 pad4-PsmES4326-24hpi -0.58 >More info -0.39 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
197 toc1-1-77hr 0.66 >More info 0.31 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
198 Nicotinamide-93hr 0.55 >More info 0.42 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
199 pepr1-1 Pepr2-3 +Pep2 10h -0.50 >More info -0.47 >More info WT +Pep2 10h Pep2 Original data GEO bulk
200 Nicotinamide-53hr 0.55 >More info 0.42 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
201 35S-MIF1 dark grown 0.61 >More info 0.36 >More info Dark-grown WT control Original data GEO bulk
202 Chitosan 3h Treatment 0.45 >More info 0.52 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
203 WT+chitooctaose 0.34 >More info 0.63 >More info WT+water chitooctaose seedlings Original data GEO bulk
204 WT-SA 0.44 >More info 0.53 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
205 Cor 24h 0.42 >More info 0.55 >More info Mock 24h Cor Original data GEO bulk
206 sni1 0.38 >More info 0.59 >More info WT Original data GEO bulk
207 col-5 hrpA 4h 0.40 >More info 0.56 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
208 Fenclorim 24hr 0.51 >More info 0.45 >More info Acetone 24hr root Original data GEO bulk
209 GO5; 0h switch to ambient CO2 concentrations; -0.51 >More info -0.45 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
210 WT resupplied Pi 4h 0.63 >More info 0.33 >More info WT complete seedlings Original data
211 eds16 whole leaf 5dpi -0.42 >More info -0.54 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
212 8h-DC3000 avrRpm1 0.45 >More info 0.51 >More info 8h-DC3000 leaves Original data GEO bulk
213 WT +elf18 2h 0.39 >More info 0.57 >More info WT untreated elf18 Original data GEO bulk
214 pmr5 0.43 >More info 0.53 >More info Col-0 Original data GEO bulk
215 Nicotinamide-49hr 0.56 >More info 0.39 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
216 WT 1wk -P 0.60 >More info 0.35 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
217 shoot-10 μM DEX- 6 hr 0.50 >More info 0.45 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
218 WT no Pi 0.60 >More info 0.35 >More info WT complete seedlings Original data
219 flu over-tAPX 0.41 >More info 0.54 >More info WT Col Original data GEO bulk
220 arf2 brz -0.43 >More info -0.52 >More info arf2 mock Original data GEO bulk
221 GR-bdl DEX IAA 0.30 >More info 0.65 >More info GR-bdl IAA Original data GEO bulk
222 ckh1 CK200 0.38 >More info 0.57 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
223 Osmotic Stress 24 h (shoot) 0.56 >More info 0.38 >More info Stress mock 24 h (shoot) Original data Stress treatments
224 A. thaliana-A. lyrata hybrid -0.38 >More info -0.56 >More info A. thaliana mature leaves before flowering Original data GEO bulk
225 GiantCell Root -0.53 >More info -0.41 >More info Control Root laser captured giant cells Original data GEO bulk
226 pho1 0.53 >More info 0.41 >More info Col2WT Original data GEO bulk
227 gpa1 -ABA GC -0.50 >More info -0.44 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
228 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.69 >More info -0.25 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
229 Mutant sav3-2 (SH) 0.31 >More info 0.63 >More info Col-0 (SH) Original data GEO bulk
230 Got7 UV 0.32 >More info 0.62 >More info Got7 mock UV seedling Original data
231 camta3-2 0.44 >More info 0.50 >More info WT Original data GEO bulk
232 pmr4-1 powdery mildew 0.34 >More info 0.60 >More info WT powdery mildew uninoculated Original data GEO bulk
233 sav3-2 shade 0.31 >More info 0.63 >More info Col-0 shade seedlings Original data GEO bulk
234 Dark 3day ivd 0.55 >More info 0.38 >More info 0h ivd Original data
235 toc1-1-49hr 0.40 >More info 0.53 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
236 35:SUB1C 0.51 >More info 0.42 >More info WT whole seedling Original data GEO bulk
237 OsSAP11 expressing -0.50 >More info -0.43 >More info WT seedlings Original data GEO bulk
238 Methyl Jasmonate 1 h 0.32 >More info 0.61 >More info Mock 1 h Original data Basic hormone treatment of seedlings
239 L2.4 mutant -0.43 >More info -0.50 >More info Wt Original data GEO bulk
240 C24 ozone 0.52 >More info 0.40 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
241 rosette leaves fdh 0.39 >More info 0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
242 Laer pretreat GA Flg22 2h 0.60 >More info 0.32 >More info Laer pretreat water control leaf discs Original data GEO bulk
243 Shoot P recovery 0.51 >More info 0.41 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
244 SCR-GR Time 1H Dex 0.50 >More info 0.42 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
245 ulp1c ulp1d +Pto 0.50 >More info 0.42 >More info ulp1c ulp1d mock Original data GEO bulk
246 toc1-1-93hr 0.50 >More info 0.42 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
247 TA induced 0.35 >More info 0.57 >More info Methanol TA Suspension cells Original data GEO bulk
248 C24 24h cold -0.53 >More info -0.38 >More info Col 24h cold leaf Original data GEO bulk
249 Laer MeJA 1h -0.57 >More info -0.34 >More info Laer Control leaf discs Original data GEO bulk
250 P.p 10.5hai 0.34 >More info 0.57 >More info At-Control roots Original data GEO bulk
251 upf1 0.50 >More info 0.40 >More info WT whole plant Original data GEO bulk
252 amiRAP hypoxic -0.38 >More info -0.52 >More info hypoxic hypoxia Original data GEO bulk
253 PBZ 0.60 >More info 0.30 >More info none PBZ Rosette Original data GEO bulk
254 npr1-1 water -0.57 >More info -0.33 >More info Col-0 water complete seedling Original data
255 TNT-seedlings 0.32 >More info 0.58 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
256 chito-octamer 0.30 >More info 0.60 >More info Col Mock Original data GEO bulk
257 col-5 DC3000 4h 0.32 >More info 0.58 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
258 leaf13 0.30 >More info 0.60 >More info unwounded leaves none Original data GEO bulk
259 pnp1-1 3h -P 0.56 >More info 0.33 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
260 downy mildew cotyledons late stage 0.51 >More info 0.38 >More info mock inoculated Cotyledons Original data GEO bulk
261 Total RNA 35S:AtCSP1-FH1 cold 0.51 >More info 0.38 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
262 Stem tissue 5 days NAA 0.39 >More info 0.50 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
263 P.p 2.5hai 0.29 >More info 0.60 >More info At-Control roots Original data GEO bulk
264 8-DAC chr11-1chr17-1 0.54 >More info 0.34 >More info 8-DAC Col-0 leaf explants Original data
265 spx1 spx2 complete 0.50 >More info 0.38 >More info WT complete seedlings Original data
266 expressing C2 MeJA -0.36 >More info -0.52 >More info LUC2T Original data GEO bulk
267 P.p 6hai 0.37 >More info 0.51 >More info At-Control roots Original data GEO bulk
268 WT AntimycinA 3h 0.38 >More info 0.50 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
269 csn5 (csn5a-2 csn5b) light 0.52 >More info 0.35 >More info WT light Original data GEO bulk
270 WT light -0.57 >More info -0.30 >More info WT dark Original data GEO bulk
271 ARR22-ox (t-zeatin 3 h) 0.57 >More info 0.30 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
272 smg5-2 0.52 >More info 0.34 >More info WT whole plant Original data GEO bulk
273 WT 3h -P 0.50 >More info 0.36 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
274 aox1a(line) MLD stressed 0.58 >More info 0.27 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
275 Col-0 C2H4 24h 0.52 >More info 0.32 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
276 current injection 0.18 >More info 0.66 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
277 Col-0 DCA 48h 0.25 >More info 0.59 >More info Col-0 MOCK 48h Original data GEO bulk
278 cat2-hCO2 -0.50 >More info -0.33 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
279 Mutant arf2-6 (IAA) -0.51 >More info -0.32 >More info Col (IAA) Original data GEO bulk
280 Nicotinamide-65hr 0.50 >More info 0.33 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
281 IAA 1 h -0.27 >More info -0.56 >More info Mock 1 h Original data Basic hormone treatment of seedlings
282 Red Light 45min -0.19 >More info -0.64 >More info White Light 45min Original data Light treatments
283 oas-a1.1 Cd 18h 0.31 >More info 0.52 >More info Cd 18h root Root Original data GEO bulk
284 pif3 Dark 0h -0.59 >More info -0.24 >More info WT Dark 0h etiolated seedling Original data GEO bulk
285 ABA JA 24h 0.25 >More info 0.58 >More info EtOH 24h 24hr Original data GEO bulk
286 GA 0.25 >More info 0.58 >More info none GA Rosette Original data GEO bulk
287 Atwrky63 -0.67 >More info -0.15 >More info Col0 none leaf Original data GEO bulk
288 phr1 phl1 Root-Pi 0.54 >More info 0.28 >More info WT Shoot+Pi roots Original data GEO bulk
289 cngc19 0.50 >More info 0.32 >More info Col-0 root Original data GEO bulk
290 WT NAA 1h -0.04 >More info -0.78 >More info WT 0h Leaf tissue Original data GEO bulk
291 vtc1-1 -0.15 >More info -0.67 >More info Col-0 whole plant Original data GEO bulk
292 til1-1 22C 0.25 >More info 0.57 >More info Col-0 22C Original data GEO bulk
293 4C 2h(SOIL) 0.25 >More info 0.57 >More info 4C 0h(SOIL) Original data GEO bulk
294 NahG 0.52 >More info 0.29 >More info Col-0 Leaves Original data GEO bulk
295 low water potential 0.61 >More info 0.20 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
296 clf-28 0.26 >More info 0.55 >More info Col whole plant Original data GEO bulk
297 Aerobic e1 ate2 0.30 >More info 0.51 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
298 rsa3-1 Na 24h 0.26 >More info 0.55 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
299 Laer pretreat GA Flg22 0h 0.53 >More info 0.27 >More info Laer pretreat water control leaf discs Original data GEO bulk
300 agb1 gpa1 +ABA LF -0.53 >More info -0.27 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
301 Blue Light 45 min 0.19 >More info 0.61 >More info White Light 45min Original data Light treatments
302 P.syringae vir 4 h (leaf) 0.28 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
303 P.p 30hai 0.27 >More info 0.53 >More info At-Control roots Original data GEO bulk
304 chito-tetramer 0.23 >More info 0.57 >More info Col Mock Original data GEO bulk
305 ARR21C-ox 0.53 >More info 0.26 >More info Col-0 Original data ARR21C overexpression
306 Laer Pst DC3000 12hpi -0.55 >More info -0.24 >More info Laer Control leaf discs Original data GEO bulk
307 WT NAA 2h -0.13 >More info -0.65 >More info WT 0h Leaf tissue Original data GEO bulk
308 gun1-1 +lincomycin -0.52 >More info -0.25 >More info Col-0 +lincomycin Original data GEO bulk
309 Nicotinamide-89hr 0.51 >More info 0.26 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
310 rosette Light Wounded 0.17 >More info 0.60 >More info rosette Light Control Original data GEO bulk
311 ABA SA 24h 0.24 >More info 0.53 >More info EtOH 24h 24hr Original data GEO bulk
312 pnp1-1 1wk -P 0.56 >More info 0.19 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
313 Col ozone 3h 0.16 >More info 0.58 >More info Col clean-air 3h ozone Original data GEO bulk
314 WT chitooctaose 0.24 >More info 0.50 >More info WT water Original data GEO bulk
315 35S:RPS4 eds1-2 2h -0.10 >More info -0.64 >More info 35S:RPS4 2h leaves Original data
316 aphid infested 0.20 >More info 0.53 >More info control aphid infested Leaves Original data GEO bulk
317 aphid infested 0.20 >More info 0.53 >More info CTR Original data GEO bulk
318 miR396b overexpressor 0.22 >More info 0.51 >More info Col-0 vegetative apices together with the leaf primordia Original data
319 Rsch 8h 0.20 >More info 0.53 >More info Rsch CA Leaves Original data
320 atmyc2 cop1 Seedling BL 0.17 >More info 0.55 >More info WT Seedling BL Original data GEO bulk
321 Nicotinamide-81hr 0.54 >More info 0.18 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
322 AtMYB30-ox 2-4h Xanthomonas 0.57 >More info 0.15 >More info WT 2-4h Xanthomonas Original data GEO bulk
323 pvip1 pvip2 seedling 0.74 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
324 siliques AtHb1 control 0.20 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
325 EBE-XVE +estradiol -0.15 >More info -0.57 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
326 opr3 JA 0.5 h -0.04 >More info 0.76 >More info opr3 0 h Original data GEO bulk
327 WT-Dry 0.08 >More info 0.64 >More info WT-CK dehydration treatment 1h Original data
328 Glyphosate EC50 0.50 >More info 0.21 >More info Carrier (Glyphosate) Original data GEO bulk
329 Kas-1 -Fe 24h -0.21 >More info -0.50 >More info Kas-1 +Fe 24h roots Original data GEO bulk
330 Kas -Fe 24h Roots -0.21 >More info -0.50 >More info Kas +Fe 24h Roots Original data GEO bulk
331 Light 0.5h steady-state 0.17 >More info 0.53 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
332 cat2-2; 8h switch to ambient CO2 concentrations; 0.61 >More info 0.09 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
333 DC3000 hrcC 2 h (leaf) 0.18 >More info 0.52 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
334 npr1 sni1 SA 0.20 >More info 0.50 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
335 Col-0 2HS 0.13 >More info 0.57 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
336 Elevated CO2 leaf primordia 0.13 >More info 0.57 >More info Ambient CO2 leaf primordia leaf primordia Original data
337 Col-0 24hpi A. brassicicola 0.67 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
338 root longitudinal zone-3 -Fe -0.13 >More info -0.56 >More info root longitudinal zone-3 standard Original data GEO bulk
339 UV 0.51 >More info 0.17 >More info WT aerial region Original data GEO bulk
340 amiRAP aerobic -0.15 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
341 WT 3H Cold 0.08 >More info 0.60 >More info WT control Original data GEO bulk
342 WT Red light 1h 0.53 >More info 0.14 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
343 eds16 whole leaf 0h UI -0.03 >More info -0.63 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
344 gpa1-4/agb1-2 clean-air 3h -0.62 >More info -0.03 >More info Col clean-air 3h clean-air Original data GEO bulk
345 GST-overexpression seedlings control 0.50 >More info 0.15 >More info WT seedlings control Seedlings Original data
346 npr1-3 MOCK 48h -0.04 >More info -0.61 >More info Col-0 MOCK 48h Original data GEO bulk
347 abi1 hypocotyl 0.15 >More info 0.50 >More info Ler hypocotyl hypocotyl Original data GEO bulk
348 SA Treated 0.56 >More info 0.08 >More info Water Original data GEO bulk
349 E.orontii Infection 3 day 0.10 >More info 0.54 >More info Uninfection 3 day Original data Elicitor treatments
350 Selenate (root) 0.11 >More info 0.52 >More info Ws (root) Original data GEO bulk
351 Root Selenate 0.11 >More info 0.52 >More info Root control 40 micromolar selenate Root Original data GEO bulk
352 Laer Flg22(Agrobacterium) 2h 0.54 >More info 0.08 >More info Laer Control leaf discs Original data GEO bulk
353 Blue Light 4 h 0.50 >More info 0.12 >More info White Light 4 h Original data Light treatments
354 entire vegetative rosette -0.51 >More info -0.10 >More info Col-0 Mock WL entire vegetative rosette Original data
355 +1.6 mM Tween 20 1 h. 0.01 >More info 0.60 >More info +distilled water 1 h. Original data GEO bulk
356 CHS-silenced type -0.56 >More info -0.04 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
357 opr3 JA 2 h 0.04 >More info 0.56 >More info opr3 0 h Original data GEO bulk
358 AZC 0.50 >More info 0.10 >More info noneHS Original data GEO bulk
359 FLIGHT TAGESB plate6 ROOTS -0.04 >More info 0.61 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
360 Leaf wounded -0.10 >More info 0.66 >More info Leaf control vegetative leaf Original data GEO bulk
361 AFB1 0h 0.55 >More info 0.00 >More info Col 0h Leaf Original data GEO bulk
362 vte2 leaves 120h LT 0.51 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
363 seed germinating in countinuous light 24h SL -0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
364 HairpinZ 4 h (leaf) 0.57 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
365 WT roots - Fe 0.52 >More info -0.01 >More info WT roots + Fe Roots Original data GEO bulk
366 Col PSTDC3000 24h 0.63 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
367 Protoplast Induced -0.07 >More info 0.57 >More info Uninduced Original data GEO bulk
368 G3P 0.51 >More info -0.02 >More info Mock distal leaves Original data GEO bulk
369 flu dark 8hours/30 minute light -0.11 >More info 0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
370 CCA1-ox 6am non-polysomal -0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
371 bri1-116 -0.28 >More info 0.73 >More info Col seedling Original data GEO bulk
372 P. infestans 6 h (leaf) 0.57 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
373 Shoot apex inflorescence (after bolting) -0.32 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
374 root - 08% oxygen - 2h -0.24 >More info 0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
375 root - 04% oxygen - 2h -0.25 >More info 0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
376 4C 1h -0.25 >More info 0.52 >More info 4C 0h Original data GEO bulk
377 root - 08% oxygen - 30min -0.39 >More info 0.60 >More info root - 21% oxygen - 30min Original data GEO bulk