4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 1h +Pi
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List of experiments correlated with "1h +Pi"  Help Download transcriptome of top 30
Score Experiment Correlation from
1h +Pi		 Correlation to
1h +Pi		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 1h +Pi 1.00 >More info 1.00 >More info 1h -Pi root Original data GEO bulk
2 1hr-pH4.5 -0.92 >More info -0.85 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
3 Whole root - low pH 30min -0.83 >More info -0.72 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk
4 Whole root - low pH 3H -0.64 >More info -0.80 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
5 6h +Pi 0.81 >More info 0.55 >More info 6h -Pi root Original data GEO bulk
6 Whole root - low pH 1H -0.68 >More info -0.65 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
7 TNT-seedlings -0.57 >More info -0.73 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
8 FLIGHT TAGESB plate6 ROOTS -0.69 >More info -0.60 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
9 chito-tetramer -0.72 >More info -0.56 >More info Col Mock Original data GEO bulk
10 Cycloheximide 3 h -0.72 >More info -0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
11 WT+chitooctaose -0.68 >More info -0.60 >More info WT+water chitooctaose seedlings Original data GEO bulk
12 Col-0 low oxygen -0.70 >More info -0.58 >More info Col-0 control low oxygen root Original data GEO bulk
13 35S:RPS4 eds1-2 2h 0.60 >More info 0.67 >More info 35S:RPS4 2h leaves Original data
14 Selenate (root) -0.68 >More info -0.59 >More info Ws (root) Original data GEO bulk
15 Root Selenate -0.68 >More info -0.59 >More info Root control 40 micromolar selenate Root Original data GEO bulk
16 WT 6H Cold -0.61 >More info -0.66 >More info WT control Original data GEO bulk
17 aba1 hypocotyl -0.66 >More info -0.60 >More info Ler hypocotyl hypocotyl Original data GEO bulk
18 abi1 hypocotyl -0.64 >More info -0.61 >More info Ler hypocotyl hypocotyl Original data GEO bulk
19 inhibitor A Treated -0.63 >More info -0.62 >More info Negative Control Original data GEO bulk
20 inhibitor B Treated -0.57 >More info -0.67 >More info Negative Control Original data GEO bulk
21 Leaf wounded -0.66 >More info -0.58 >More info Leaf control vegetative leaf Original data GEO bulk
22 WT seedlings MV -0.62 >More info -0.61 >More info WT seedlings control Seedlings Original data GEO bulk
23 chito-octamer -0.68 >More info -0.55 >More info Col Mock Original data GEO bulk
24 WT+H2O2 -0.56 >More info -0.67 >More info WT H2O2 Original data GEO bulk
25 P.p 2.5hai -0.67 >More info -0.56 >More info At-Control roots Original data GEO bulk
26 hira-root 0.74 >More info 0.47 >More info WT-root root Original data
27 Col-Luc WT 3h antimycin A -0.70 >More info -0.51 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
28 Bur-0-30min IAA -0.78 >More info -0.43 >More info Bur-0h IAA whole plant Original data GEO bulk
29 8hr-pH4.5 -0.64 >More info -0.56 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
30 WT Nitrate 0.5h -0.81 >More info -0.39 >More info WT untreated Original data GEO bulk
31 IXB induced -0.60 >More info -0.60 >More info Methanol IXB Suspension cells Original data GEO bulk
32 9 hr Hypoxia 1 hr recovery Total RNA -0.69 >More info -0.51 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
33 Cocultivation 8 hrs root -0.69 >More info -0.51 >More info Mock cocultivation 8 hrs root Root Original data
34 root Dosed gold -0.69 >More info -0.50 >More info root No gold .125 mM gold 24 h roots Original data
35 IAA 0.5 h -0.68 >More info -0.51 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
36 vtc2 mature somatic embryo -0.55 >More info -0.64 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
37 0.125 mM gold 24 h -0.69 >More info -0.50 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
38 WT 3h -P -0.63 >More info -0.55 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
39 WT 3H Cold -0.57 >More info -0.61 >More info WT control Original data GEO bulk
40 SCR-GR Time 12H Dex -0.64 >More info -0.53 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
41 Bay-0-30min IAA -0.73 >More info -0.43 >More info Bay-0-0h IAA whole plant Original data GEO bulk
42 bak1-3 +Pep2 2h -0.59 >More info -0.57 >More info WT +Pep2 2h Pep2 Original data GEO bulk
43 Col-0-30min IAA -0.82 >More info -0.34 >More info Col-0-0h IAA whole plant Original data GEO bulk
44 WT chitooctaose -0.69 >More info -0.47 >More info WT water Original data GEO bulk
45 SCL3 OE 0.67 >More info 0.47 >More info Col-0 whole root Original data GEO bulk
46 bHLH122 ox 0.51 >More info 0.63 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
47 seedlings-week-old RECA1-overexpressing
transgenic		 -0.63 >More info -0.51 >More info seedlings-week-old Col-0 seedlings Original data
48 oligomycin 1 h -0.56 >More info -0.58 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
49 4C 1h -0.56 >More info -0.58 >More info 4C 0h Original data GEO bulk
50 wnk8-2 untreated 0.60 >More info 0.54 >More info Col-0 untreated seedlings Original data GEO bulk
51 Col-0 DCA 48h -0.67 >More info -0.46 >More info Col-0 MOCK 48h Original data GEO bulk
52 oligomycin 4 h -0.69 >More info -0.44 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
53 Col in Pi deficiency medium -0.57 >More info -0.56 >More info Col in control medium root Original data GEO bulk
54 myb61 xylem -0.52 >More info -0.61 >More info wt xylem xylem Original data GEO bulk
55 anac017-2 AntimycinA 3h 0.69 >More info 0.44 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
56 TA induced -0.55 >More info -0.58 >More info Methanol TA Suspension cells Original data GEO bulk
57 ex2 flu dark 8hours/30 minute light -0.57 >More info -0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
58 Col-0 Root 100 mM ATP 30 min -0.63 >More info -0.49 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
59 max4 hypocotyl -0.64 >More info -0.48 >More info wt hypocotyl hypocotyl Original data GEO bulk
60 WT-Dry -0.56 >More info -0.56 >More info WT-CK dehydration treatment 1h Original data
61 12m.KCl -0.64 >More info -0.48 >More info To. KCl 14 day old Roots Original data GEO bulk
62 Cold Stress 24 h (root) -0.63 >More info -0.49 >More info Stress mock 24 h (root) Original data Stress treatments
63 AgNO3 3 h -0.46 >More info -0.66 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
64 Col-0-1h IAA -0.77 >More info -0.34 >More info Col-0-0h IAA whole plant Original data GEO bulk
65 IAA/inhibitor A Treated -0.58 >More info -0.53 >More info IAA Treated Original data GEO bulk
66 4C 2h(SOIL) -0.54 >More info -0.57 >More info 4C 0h(SOIL) Original data GEO bulk
67 AtLysM RLK1 mutant chitooctaose 0.69 >More info 0.42 >More info WT chitooctaose Original data GEO bulk
68 npr1 sni1 brca2a SA 0.56 >More info 0.54 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
69 Bur-0-1h IAA -0.71 >More info -0.39 >More info Bur-0h IAA whole plant Original data GEO bulk
70 IAA/inhibitor B Treated -0.45 >More info -0.65 >More info IAA Treated Original data GEO bulk
71 seedlings by volatiles from leafminer damaged
Lima bean 24h		 0.63 >More info 0.46 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
72 GA -0.56 >More info -0.53 >More info none GA Rosette Original data GEO bulk
73 Kas -Fe 24h Roots 0.60 >More info 0.49 >More info Kas +Fe 24h Roots Original data GEO bulk
74 IAA 1 h -0.61 >More info -0.48 >More info Mock 1 h Original data Basic hormone treatment of seedlings
75 Kas-1 -Fe 24h 0.60 >More info 0.49 >More info Kas-1 +Fe 24h roots Original data GEO bulk
76 rosette Light Wounded -0.62 >More info -0.47 >More info rosette Light Control Original data GEO bulk
77 protoplasts T1 [flg22] -0.57 >More info -0.51 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
78 Heat and anoxia -0.58 >More info -0.50 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
79 Col-0 37C -0.62 >More info -0.45 >More info Col-0 22C Original data GEO bulk
80 R. solani AG8 -0.61 >More info -0.46 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
81 FHY3p dark+DEX 0.67 >More info 0.40 >More info FHY3p dark+mock Original data GEO bulk
82 9 hr Hypoxia 1 hr recovery IP RNA -0.65 >More info -0.42 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
83 WT NAA/flg 1h -0.59 >More info -0.48 >More info WT 0h Leaf tissue Original data GEO bulk
84 Anoxia -0.48 >More info -0.59 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
85 dorn1-1 Root 100 mM ATP 30 min 0.53 >More info 0.53 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
86 WT 30μM arsenate 8 hours. -0.59 >More info -0.47 >More info WT control (not supplemented). Original data
87 P.p 6hai -0.67 >More info -0.38 >More info At-Control roots Original data GEO bulk
88 rsa3-1 Na 24h -0.60 >More info -0.45 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
89 root protoplasts 40 mM NaCl -0.65 >More info -0.40 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
90 pXVE:HA-EDM2-a untreated 0.54 >More info 0.51 >More info Col-0 untreated seedlings Original data GEO bulk
91 wnk8-1 untreated 0.55 >More info 0.50 >More info Col-0 untreated seedlings Original data GEO bulk
92 myb61 cork -0.45 >More info -0.60 >More info wt cork cork Original data GEO bulk
93 toc1-1-65hr -0.56 >More info -0.48 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
94 Light -0.63 >More info -0.41 >More info Control Original data GEO bulk
95 CDB1-Knockout 0.52 >More info 0.52 >More info WT Original data GEO bulk
96 WT AntimycinA 3h -0.61 >More info -0.43 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
97 P.p 30hai -0.62 >More info -0.41 >More info At-Control roots Original data GEO bulk
98 root longitudinal zone-4 pH 4.6 -0.55 >More info -0.48 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
99 Protoplast Induced -0.45 >More info -0.58 >More info Uninduced Original data GEO bulk
100 OXUPB1-2 elongation zone -0.54 >More info -0.48 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
101 Laer Flg22 1h -0.59 >More info -0.42 >More info Laer Control leaf discs Original data GEO bulk
102 CLO 4mM -0.56 >More info -0.45 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
103 rosette Dark Wounded -0.66 >More info -0.35 >More info rosette Dark Control Original data GEO bulk
104 Whole root - low pH 12H -0.54 >More info -0.47 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
105 15m.KCl -0.60 >More info -0.41 >More info To. KCl 14 day old Roots Original data GEO bulk
106 ORS1 induced -0.55 >More info -0.45 >More info mock-induced rosette leaves Original data GEO bulk
107 Laer Flg22+GA 1h -0.59 >More info -0.41 >More info Laer Control leaf discs Original data GEO bulk
108 npr1 sni1 SA -0.57 >More info -0.43 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
109 bri1-116 0.27 >More info 0.73 >More info Col seedling Original data GEO bulk
110 del1-1 mutant 5d uninfected -0.38 >More info -0.62 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
111 seedlings protease IV -0.55 >More info -0.44 >More info seedlings nontreated control whole seedling Original data
112 root cells endodermis and quiescent center -Fe -0.60 >More info -0.39 >More info whole roots standard Original data GEO bulk
113 WT flg22 1h -0.51 >More info -0.48 >More info WT 0h Leaf tissue Original data GEO bulk
114 Seedling-HeatStressed TOTALmRNA -0.58 >More info -0.41 >More info Seedling-control TOTALmRNA seedling Original data
115 5-Triiodobenzoic acid3 h -0.44 >More info -0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
116 flu -0.49 >More info -0.50 >More info WT Col Original data GEO bulk
117 gai MeJA 1h 0.63 >More info 0.35 >More info Laer MeJA 1h leaf discs Original data GEO bulk
118 9 hr Hypoxia IP RNA -0.57 >More info -0.41 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
119 P.p 10.5hai -0.60 >More info -0.38 >More info At-Control roots Original data GEO bulk
120 root cells cortex 140mM NaCl 48 hours -0.61 >More info -0.37 >More info root cells cortex standard 1 hour root cells cortex Original data
121 Seedling-HeatStressed POLYSOMESmRNA -0.58 >More info -0.40 >More info Seedling-control POLYSOMESmRNA seedling Original data
122 P35S:rGRF3 -0.59 >More info -0.39 >More info WS Original data GEO bulk
123 coi1-2 -0.53 >More info -0.44 >More info Col-0 mock Whole seedling Original data GEO bulk
124 npr1 sni1 ssn2 SA 0.61 >More info 0.36 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
125 Roots Cd 0.69 >More info 0.28 >More info Roots control Cd Root Original data GEO bulk
126 24h +Pi 0.66 >More info 0.31 >More info 24h -Pi root Original data GEO bulk
127 sid2-avrB-6h -0.56 >More info -0.41 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
128 root cells epidermis 140mM NaCl 48 hours -0.59 >More info -0.38 >More info root cells epidermis standard 1 hour root cells epidermis Original data
129 3x(m) -0.31 >More info -0.66 >More info 2x two week old seedlings Original data
130 CMP 4hr -0.56 >More info -0.40 >More info Acetone 4hr root Original data GEO bulk
131 C24-1h IAA -0.55 >More info -0.41 >More info C24-0h IAA whole plant Original data GEO bulk
132 2 hr Hypoxia Total RNA -0.57 >More info -0.39 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
133 Col-0 9 hpi A. brassicicola -0.55 >More info -0.41 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
134 9 hr Hypoxia Total RNA -0.54 >More info -0.42 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
135 root cells endodermis 140mM NaCl 48 hours -0.50 >More info -0.46 >More info root cells endodermis standard 1 hour root cells endodermis Original data
136 C24-30min IAA -0.62 >More info -0.34 >More info C24-0h IAA whole plant Original data GEO bulk
137 Wounding Stress3 h (shoot) -0.64 >More info -0.32 >More info Stress mock 3 h (shoot) Original data Stress treatments
138 Ws HS -0.41 >More info -0.55 >More info Ws control heat shocked seedling Original data GEO bulk
139 irradiated leaf (cmt 5d) -0.61 >More info -0.34 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
140 CMV-WT -0.51 >More info -0.44 >More info Mock-At Aerial tissues Original data GEO bulk
141 WT 2-4h Xanthomonas -0.60 >More info -0.35 >More info WT T0 Original data GEO bulk
142 phr1 Root-Pi -0.60 >More info -0.35 >More info WT Root+Pi roots Original data GEO bulk
143 Leaf systemic -0.65 >More info -0.30 >More info Leaf control vegetative leaf Original data GEO bulk
144 WT flg22 2h -0.54 >More info -0.41 >More info WT 0h Leaf tissue Original data GEO bulk
145 flu dark 8hours/30 minute light -0.34 >More info -0.61 >More info col dark 8hours/30 minute light Original data GEO bulk
146 Col ozone 3h -0.36 >More info -0.59 >More info Col clean-air 3h ozone Original data GEO bulk
147 Hydrogen Peroxide 500 uM -0.45 >More info -0.50 >More info Control RB and PER Hydrogen Peroxide Original data
148 nia1nia2noa1-2 -0.53 >More info -0.41 >More info Col-0 whole seedlings Original data GEO bulk
149 3m.KCl -0.43 >More info -0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
150 ein2-1 9 hpi A. brassicicola -0.53 >More info -0.40 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
151 1.5 hr ammonium -0.55 >More info -0.38 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
152 Apex mir-3TCP 14DAS 0.54 >More info 0.39 >More info Apex Col 14DAS Original data GEO bulk
153 Salt Stress 24 h (root) -0.56 >More info -0.37 >More info Stress mock 24 h (root) Original data Stress treatments
154 tbf1-mock infiltration 0.56 >More info 0.37 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
155 SA -0.39 >More info -0.54 >More info WT mock Whole seedling Original data GEO bulk
156 COL-0-Fe--root -0.51 >More info -0.42 >More info COL-0-Ctrl--root root Original data
157 DFPM -0.50 >More info -0.43 >More info control Original data GEO bulk
158 ataf1-1 mutant Col-0 Bgh inoculated -0.57 >More info -0.36 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
159 arf2 brz 0.62 >More info 0.31 >More info arf2 mock Original data GEO bulk
160 root cells endodermis 140mM NaCl 20 hours -0.54 >More info -0.38 >More info root cells endodermis standard 1 hour root cells endodermis Original data
161 35S::MBF1c -0.53 >More info -0.39 >More info control Original data GEO bulk
162 root endodermis -S 0.54 >More info 0.38 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
163 pnp1-1 1wk +P -0.54 >More info -0.38 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
164 root cells cortex 140mM NaCl 20 hours -0.56 >More info -0.36 >More info root cells cortex standard 1 hour root cells cortex Original data
165 WUSp cells -0.54 >More info -0.38 >More info Protoplast Induced Original data GEO bulk
166 2 hr Hypoxia IP RNA -0.60 >More info -0.32 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
167 Col-0-3h IAA -0.63 >More info -0.29 >More info Col-0-0h IAA whole plant Original data GEO bulk
168 root hypoxia total -0.60 >More info -0.32 >More info root control total Original data GEO bulk
169 HRE1-RNAi20 normoxia 0.31 >More info 0.61 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
170 2hr continuous KNO3 PrR cell -0.30 >More info -0.62 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
171 npr1-3 MOCK 48h 0.56 >More info 0.35 >More info Col-0 MOCK 48h Original data GEO bulk
172 NJ15 -0.51 >More info -0.40 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
173 root cells endodermis 140mM NaCl 32 hours -0.53 >More info -0.38 >More info root cells endodermis standard 1 hour root cells endodermis Original data
174 root epidermis and lateral root cap pH4.6 -0.53 >More info -0.38 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
175 Nicotinamide-81hr -0.57 >More info -0.34 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
176 ein5-1 ski2-3 -0.60 >More info -0.31 >More info Col-0 aerial tissue Original data
177 LTN008-2 aza-dc -0.60 >More info -0.31 >More info LTN012-2 Mock Original data
178 IMI 4mM -0.59 >More info -0.32 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
179 Chitin -0.51 >More info -0.39 >More info Col C Original data GEO bulk
180 axr1 hypocotyl -0.51 >More info -0.39 >More info wt hypocotyl hypocotyl Original data GEO bulk
181 seedling 24h after HZE atm-1 -0.55 >More info -0.35 >More info seedling day 2 unirradiated atm-1 24h Original data
182 HopZ1a treated -0.55 >More info -0.35 >More info col Original data GEO bulk
183 oas-a1.1 Cd 18h -0.39 >More info -0.51 >More info Cd 18h root Root Original data GEO bulk
184 root cells columella root cap -Fe -0.58 >More info -0.32 >More info whole roots standard Original data GEO bulk
185 bak1-3 +Pep2 10h -0.56 >More info -0.33 >More info WT +Pep2 10h Pep2 Original data GEO bulk
186 WT 90-105 min Xanthomonas -0.55 >More info -0.34 >More info WT T0 Original data GEO bulk
187 root cells stele -Fe -0.62 >More info -0.27 >More info whole roots standard Original data GEO bulk
188 Fei-0-30min IAA -0.63 >More info -0.26 >More info Fei-0-0h IAA whole plant Original data GEO bulk
189 WT roots - Fe -0.61 >More info -0.28 >More info WT roots + Fe Roots Original data GEO bulk
190 Col-0-avrB-6h -0.51 >More info -0.38 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
191 3x(p) -0.37 >More info -0.52 >More info 2x two week old seedlings Original data
192 WT (Col-0) inflorescence drought day 4 -0.60 >More info -0.29 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
193 Nicotinamide-61hr -0.55 >More info -0.33 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
194 Nicotinamide-57hr -0.56 >More info -0.32 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
195 dark-hs -0.52 >More info -0.36 >More info dark-control seedling Original data
196 msh1 albino -0.60 >More info -0.28 >More info WT aerial part Original data GEO bulk
197 root cells cortex 140mM NaCl 32 hours -0.51 >More info -0.37 >More info root cells cortex standard 1 hour root cells cortex Original data
198 mutant acs4A (single mutant) 0.63 >More info 0.25 >More info col control (single mutant) Original data GEO bulk
199 root longitudinal zone-4 -Fe -0.36 >More info -0.52 >More info root longitudinal zone-4 standard Original data GEO bulk
200 downy mildew cotyledons late stage -0.54 >More info -0.33 >More info mock inoculated Cotyledons Original data GEO bulk
201 Mutant axr3-1 (IAA) -0.32 >More info -0.55 >More info Col (IAA) Original data GEO bulk
202 Col-0 RNAi-MBS2/mbs1-1 HL 3h 0.33 >More info 0.54 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
203 Whole root - low pH 6H -0.51 >More info -0.36 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
204 AvrRpt2 Col-0 6hpi -0.63 >More info -0.24 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
205 CMV-A2b mutant -0.63 >More info -0.24 >More info Mock-At Aerial tissues Original data GEO bulk
206 WT no Pi -0.59 >More info -0.28 >More info WT complete seedlings Original data
207 OE WRKY63.3 high light -0.51 >More info -0.36 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
208 vte2 leaves 48h LT -0.66 >More info -0.21 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
209 Root -Cs -0.37 >More info -0.50 >More info Control-root Original data GEO bulk
210 Col-0 2HS -0.54 >More info -0.32 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
211 cdpk6-yfp -0.60 >More info -0.26 >More info Kan seedlings Original data GEO bulk
212 Nicotinamide-85hr -0.55 >More info -0.30 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
213 spx1 spx2 no Pi -0.77 >More info -0.08 >More info WT no Pi seedlings Original data
214 root cells epidermis 140mM NaCl 32 hours -0.50 >More info -0.35 >More info root cells epidermis standard 1 hour root cells epidermis Original data
215 dde2-2 9 hpi A. brassicicola -0.57 >More info -0.28 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
216 grf1/grf2/grf3 -0.61 >More info -0.24 >More info WS Original data GEO bulk
217 CMP 24hr -0.57 >More info -0.28 >More info Acetone 24hr root Original data GEO bulk
218 Laer pretreat JA Flg22 1h -0.55 >More info -0.29 >More info Laer pretreat water control leaf discs Original data GEO bulk
219 cys-c1 leaf -0.54 >More info -0.30 >More info Leaf-WT leaves Original data GEO bulk
220 root cells -Fe -0.54 >More info -0.30 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
221 WT 24H Cold -0.52 >More info -0.32 >More info WT control Original data GEO bulk
222 sid2-2 9 hpi A. brassicicola -0.50 >More info -0.34 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
223 WT Col-0 Bgh inoculated -0.51 >More info -0.33 >More info WT Col-0 Un-inoculated Original data GEO bulk
224 Fenclorim 24hr -0.55 >More info -0.28 >More info Acetone 24hr root Original data GEO bulk
225 seedlings +5AC -0.51 >More info -0.32 >More info control seedlings 10-day old whole seedling Original data GEO bulk
226 Col 1d -0.55 >More info -0.28 >More info Col CA Leaves Original data
227 Laer pretreat GA+JA Flg22 0h -0.57 >More info -0.26 >More info Laer pretreat water control leaf discs Original data GEO bulk
228 root longitudinal zone-2 pH 4.6 -0.52 >More info -0.30 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
229 Ts5 roots 2hr KCl control -0.52 >More info -0.30 >More info Col0 roots 2hr KCl control root Original data GEO bulk
230 Bur-0-3h IAA -0.51 >More info -0.31 >More info Bur-0h IAA whole plant Original data GEO bulk
231 rli -0.50 >More info -0.32 >More info WT whole plant Original data GEO bulk
232 Osmotic Stress 24 h (root) -0.56 >More info -0.26 >More info Stress mock 24 h (root) Original data Stress treatments
233 root longitudinal zone-1 low sulfur 0.32 >More info 0.50 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
234 erf115ko roottip5days 0.59 >More info 0.23 >More info Col-0 roottip5days root tips Original data
235 AsAKiin11 T1 0.52 >More info 0.29 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
236 ABA DFPM -0.51 >More info -0.30 >More info control Original data GEO bulk
237 GiantCell Root 0.51 >More info 0.30 >More info Control Root laser captured giant cells Original data GEO bulk
238 Rose Bengal 0.5 uM -0.27 >More info -0.54 >More info Control RB and PER Rose Bengal Original data
239 BLM -0.52 >More info -0.28 >More info CK BLM seedling Original data
240 Col upon hypoxia 6 hrs -0.50 >More info -0.30 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
241 Te ozone -0.51 >More info -0.29 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
242 HARAP hypoxic -0.51 >More info -0.29 >More info hypoxic hypoxia Original data GEO bulk
243 Nicotinamide-65hr -0.56 >More info -0.24 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
244 root callus inducing medium 24h 0.52 >More info 0.28 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
245 root callus inducing medium 12 h 0.58 >More info 0.22 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
246 HARAP aerobic 0.23 >More info 0.57 >More info WT aerobic aerobic Original data GEO bulk
247 Kas-1 -Fe 48h 0.60 >More info 0.19 >More info Kas-1 +Fe 24h roots Original data GEO bulk
248 Kas -Fe 48h Roots 0.60 >More info 0.19 >More info Kas +Fe 24h Roots Original data GEO bulk
249 seedling 12h after HZE WT -0.56 >More info -0.23 >More info seedling day 1 unirradiated WT 12h Original data
250 GR:KAN1 DEX WL -0.50 >More info -0.29 >More info GR:KAN1 Mock WL seedlings Original data
251 Col-0 wt Hypoxic -0.64 >More info -0.15 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
252 camta1 root water 0.63 >More info 0.16 >More info Col-0 root water root Original data GEO bulk
253 stn7-1 0.55 >More info 0.23 >More info Col-0 rosette leaves Original data GEO bulk
254 Col leaf 100mM NaCl -0.50 >More info -0.28 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
255 Col leaf 100mM NaCl -0.50 >More info -0.28 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
256 Col 100mM NaCl -0.50 >More info -0.28 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
257 csn4-1 mutant -0.50 >More info -0.26 >More info WT dark Original data GEO bulk
258 FLIGHT TAGESB plate6 SHOOTS -0.51 >More info -0.25 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
259 plant (tga2-5-6) 4h phytoprostane A1 -0.24 >More info -0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
260 ANOXIA 0.21 >More info 0.55 >More info ANOXIA+SUCROSE Original data GEO bulk
261 columella auxin -0.24 >More info -0.52 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
262 ckh1 CK200 -0.60 >More info -0.15 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
263 Nicotinamide-89hr -0.53 >More info -0.22 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
264 seedling 24h after Gamma WT -0.54 >More info -0.21 >More info seedling day 2 unirradiated WT 24h Original data
265 2hr continuous KNO3 EPR cell -0.19 >More info -0.56 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
266 roottip hypoxia total -0.50 >More info -0.23 >More info roottip control total Original data GEO bulk
267 toc1-1-53hr -0.20 >More info -0.53 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
268 Col-0 HS -0.16 >More info -0.57 >More info Col-0 control heat shocked seedling Original data GEO bulk
269 WT (Col-0) heat shock -0.16 >More info -0.57 >More info WT (Col-0) whole seedling Original data GEO bulk
270 Atwrky63 0.55 >More info 0.17 >More info Col0 none leaf Original data GEO bulk
271 Brassinolide 3 h (det2) -0.52 >More info -0.20 >More info Mock 3 h (det2) Original data Basic hormone treatment of seedlings
272 HRE1-RNAi20 hypoxia 6 hrs -0.54 >More info -0.18 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
273 FLIGHT TAGESB plate -0.72 >More info 0.00 >More info GROUND CONTROL TAGESB plate Original data
274 afb3-1 2h KCl 0.18 >More info 0.54 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
275 dcl1-7 -0.56 >More info -0.15 >More info Ler Original data GEO bulk
276 des1.1 -0.16 >More info -0.55 >More info Leaves-WT leaf Original data GEO bulk
277 WT 1wk -P -0.51 >More info -0.20 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
278 Rsch 8h -0.53 >More info -0.18 >More info Rsch CA Leaves Original data
279 coi1-16 ein2 sid2 ozone -0.52 >More info -0.19 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
280 swn-7 0.58 >More info 0.13 >More info Col whole plant Original data GEO bulk
281 BI-1-30min IAA -0.56 >More info -0.14 >More info BI-1-0h IAA whole plant Original data GEO bulk
282 gun5 control -0.53 >More info -0.17 >More info Col-0 control Original data GEO bulk
283 WT Root Hypoxia -0.57 >More info -0.13 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
284 Col light-dark EtOH -0.51 >More info -0.19 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
285 CeO2 germinant 0.11 >More info 0.58 >More info Millipore Water germinant CeO2 seedling Original data
286 mutant acs5C (single mutant) 0.51 >More info 0.17 >More info col control (single mutant) Original data GEO bulk
287 iron minus 1 h 0.53 >More info 0.15 >More info iron +1 h root Original data GEO bulk
288 RRE2 Chitin -0.57 >More info -0.11 >More info Chitin Original data GEO bulk
289 triploid female excess 0.14 >More info 0.52 >More info tetraploid Original data GEO bulk
290 Laer Alternaria 3dpi 0.55 >More info 0.09 >More info Laer Control leaf discs Original data GEO bulk
291 ein3 eil1 -0.52 >More info -0.12 >More info Col-0 mock Whole seedling Original data GEO bulk
292 GR-REV 120min -0.53 >More info -0.11 >More info Col 120min Original data GEO bulk
293 ckh2 CK200 -0.55 >More info -0.08 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
294 WT Root-Pi -0.55 >More info -0.08 >More info WT Root+Pi roots Original data GEO bulk
295 Laer MeJA 1h -0.51 >More info -0.12 >More info Laer Control leaf discs Original data GEO bulk
296 Shoot apex inflorescence (after bolting) -0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
297 Phytoprostane A1 4 h -0.09 >More info -0.54 >More info Col-0 Original data GEO bulk
298 P35S:rGRF1 0.53 >More info 0.09 >More info Col-0 Original data GEO bulk
299 mutant acs5D (single mutant) 0.58 >More info 0.04 >More info col control (single mutant) Original data GEO bulk
300 cat2-2; 8h switch to ambient CO2 concentrations; 0.01 >More info -0.63 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
301 psad1-1 stn7-1 0.53 >More info 0.07 >More info Col-0 rosette leaves Original data GEO bulk
302 seedling 24h after HZE WT -0.61 >More info 0.01 >More info seedling day 2 unirradiated WT 24h Original data
303 CCA1-ox 6am non-polysomal 0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
304 C24 24h cold 0.50 >More info 0.09 >More info Col 24h cold leaf Original data GEO bulk
305 clf-28 0.65 >More info -0.07 >More info Col whole plant Original data GEO bulk
306 albino Ds13-2198-1 0.54 >More info 0.04 >More info control Original data GEO bulk
307 upb1-1 elongation zone 0.04 >More info 0.54 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
308 irradiated leaf (WT 1d) -0.50 >More info -0.08 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
309 WT NAA 1h -0.50 >More info -0.07 >More info WT 0h Leaf tissue Original data GEO bulk
310 RRE1 Chitin -0.55 >More info -0.02 >More info Chitin Original data GEO bulk
311 gai Flg22 1h 0.54 >More info 0.03 >More info Laer Flg22 1h leaf discs Original data GEO bulk
312 PNO8 3 h -0.01 >More info -0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
313 seed germinating in countinuous light 24h SL -0.10 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
314 penta MeJA 1h -0.60 >More info 0.03 >More info Laer MeJA 1h leaf discs Original data GEO bulk
315 WT zebularine -0.57 >More info -0.00 >More info WT mock shoot apical meristem Original data
316 Laer pretreat GA Flg22 0h -0.53 >More info -0.03 >More info Laer pretreat water control leaf discs Original data GEO bulk
317 AsAKiin11 T3 0.53 >More info 0.03 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
318 HairpinZ 4 h (leaf) -0.51 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
319 MPK6 ox Root Hypoxia -0.64 >More info 0.10 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
320 Ibuprofen 3 h 0.06 >More info -0.60 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
321 anac017-1 AntimycinA 3h -0.56 >More info 0.04 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
322 Col BTH -0.15 >More info 0.67 >More info Col rosettes Original data GEO bulk
323 ice1 control -0.57 >More info 0.06 >More info WT control Original data GEO bulk
324 mature endodermis glcal -0.52 >More info 0.02 >More info Control for tissue data endodermis Original data GEO bulk
325 hsfa2 KO 0.50 >More info 0.00 >More info WT (Col-0) whole seedling Original data GEO bulk
326 myb50 xylem -0.53 >More info 0.04 >More info wt xylem xylem Original data GEO bulk
327 HMG -0.52 >More info 0.03 >More info Control for tissue data shoot apical meristem Original data GEO bulk
328 CLV3n cells -0.53 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
329 camta1 root drought 0.50 >More info -0.03 >More info Col-0 root drought root Original data GEO bulk
330 T101A 10mM NH4NO3 -0.56 >More info 0.11 >More info col 10mM NH4NO3 Root Original data
331 myb3 myb3r4d -0.51 >More info 0.06 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
332 Laer pretreat GA Flg22 1h -0.26 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
333 250uM K-nitrate 20min roots 0.19 >More info -0.62 >More info 250uM KCl 20min roots Roots Original data GEO bulk
334 HDG4 -0.52 >More info 0.10 >More info Control for tissue data shoot apical meristem Original data GEO bulk
335 atmospheric CO2 low Mg root -0.51 >More info 0.09 >More info atmospheric CO2 normal Mg root Root Original data
336 IAA7mII over-expressor IAA Treated -0.29 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
337 Heat shock optimum -0.27 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
338 E.orontii Infection 6 h 0.18 >More info -0.53 >More info Uninfection 6 h Original data Elicitor treatments
339 gpa1-4/agb1-2 ozone 2d -0.22 >More info 0.57 >More info Col ozone 2d ozone Original data GEO bulk
340 MPK6 ox Shoot Hypoxia -0.54 >More info 0.22 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
341 siliques AtHb1 control -0.21 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
342 root cells cortex -Fe -0.53 >More info 0.26 >More info whole roots standard Original data GEO bulk
343 Col0-PsmES4326-24hpi -0.42 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
344 Leafminer damaged seedlings -0.44 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk