4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on sni1
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List of experiments correlated with "sni1"  Help Download transcriptome of top 30
Score Experiment Correlation from
sni1		 Correlation to
sni1		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 sni1 1.00 >More info 1.00 >More info WT Original data GEO bulk
2 Elevated CO2 AMPLE N DAY 0.85 >More info 0.84 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
3 CMV-WT 0.83 >More info 0.83 >More info Mock-At Aerial tissues Original data GEO bulk
4 smg7b-1 0.84 >More info 0.80 >More info WT whole plant Original data GEO bulk
5 ceh1 mutant 0.83 >More info 0.81 >More info Parent line Original data
6 UV Stress 24 h (shoot) 0.81 >More info 0.83 >More info Stress mock 24 h (shoot) Original data Stress treatments
7 Col ozone 2d 0.81 >More info 0.80 >More info Col clean-air 2d ozone Original data GEO bulk
8 WT powdery mildew 0.81 >More info 0.79 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
9 pmr5 0.82 >More info 0.78 >More info Col-0 Original data GEO bulk
10 Elevated CO2 AMPLE N NIGHT 0.81 >More info 0.78 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
11 del1-1 mutant 5d uninfected 0.80 >More info 0.79 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
12 Col whole leaf 5dpi 0.80 >More info 0.79 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
13 pmr5 pmr6 0.83 >More info 0.75 >More info Col-0 Original data GEO bulk
14 RPL18 TuMV inoculated total RNA 0.77 >More info 0.81 >More info mock inoculated total RNA PO Original data GEO bulk
15 pvip1 pvip2 0.84 >More info 0.74 >More info Col-0 whole rosettes Original data GEO bulk
16 RPL18 TuMV inoculated polysomal RNA 0.78 >More info 0.79 >More info mock inoculated polysomal RNA PO Original data GEO bulk
17 bio4-1 mutant leaves 0.76 >More info 0.81 >More info WT leaves leaves Original data GEO bulk
18 Mutant siz1-3 0.82 >More info 0.75 >More info Col-0 Original data GEO bulk
19 siz1-3 control 0.82 >More info 0.75 >More info Col-0 control Original data GEO bulk
20 S58-2 0.84 >More info 0.72 >More info wt Original data GEO bulk
21 Col whole leaf 7dpi 0.83 >More info 0.73 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
22 edr1 18 h powdery mildew 0.83 >More info 0.73 >More info Col-0 18 h powdery mildew Original data GEO bulk
23 OH1 0.79 >More info 0.76 >More info Col-0 leaves Original data GEO bulk
24 aba3-1 0.84 >More info 0.71 >More info wt Original data GEO bulk
25 WT-SA 0.77 >More info 0.77 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
26 Col whole leaf amplified 5 dpi 0.80 >More info 0.74 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
27 gh3.5D uninoculated -0.81 >More info -0.73 >More info Col-0 48 hpi Original data GEO bulk
28 SLWF infested 0.81 >More info 0.73 >More info SLWF uninfested rosette tissue Original data GEO bulk
29 Col-0 INA 48h 0.74 >More info 0.79 >More info Col-0 MOCK 48h Original data GEO bulk
30 eds16 whole leaf 6hpi -0.78 >More info -0.75 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
31 cpr5 0.81 >More info 0.72 >More info WT(COL) Original data GEO bulk
32 Col-0 INA 6d 0.78 >More info 0.74 >More info Col-0 MOCK 6d Original data GEO bulk
33 Col whole leaf 5 dpi 0.77 >More info 0.75 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
34 bio4-1 mutant watered00µM biotin leaves -0.75 >More info -0.77 >More info bio4-1 mutant leaves leaves Original data GEO bulk
35 cpr5 0.79 >More info 0.73 >More info WT seedling Original data GEO bulk
36 Elevated CO2 fully expanded leaf 0.81 >More info 0.70 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
37 sid2 -0.76 >More info -0.75 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
38 cpr5scv1 0.83 >More info 0.68 >More info WT(COL) Original data GEO bulk
39 S14-150 0.83 >More info 0.68 >More info wt Original data GEO bulk
40 Col-0 48 hpi 0.83 >More info 0.68 >More info Col-0 uninoculated Original data GEO bulk
41 ice1 control 0.79 >More info 0.71 >More info WT control Original data GEO bulk
42 A. thaliana-A. lyrata hybrid -0.77 >More info -0.73 >More info A. thaliana mature leaves before flowering Original data GEO bulk
43 Elevated CO2 expanding leaf 0.80 >More info 0.70 >More info Ambient CO2 expanding leaf expanding leaf Original data
44 SA 4mM 0.82 >More info 0.68 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
45 A6 mutant 0.78 >More info 0.71 >More info WT rosette leaves Rosette leaves Original data GEO bulk
46 camta3-2 0.76 >More info 0.73 >More info WT Original data GEO bulk
47 Col BTH 0.82 >More info 0.67 >More info Col rosettes Original data GEO bulk
48 sid2-1 cold -0.74 >More info -0.75 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
49 eds16 whole leaf 5dpi -0.73 >More info -0.75 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
50 bZIP1ko mutant N+Light- 0.73 >More info 0.75 >More info WT-sib N+Light- whole plant Original data GEO bulk
51 OE WRKY63.3 high light 0.75 >More info 0.73 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
52 cat2-hCO2 -0.81 >More info -0.66 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
53 irradiated leaf (cmt 1d) 0.80 >More info 0.66 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
54 vtc2 (I) 0.79 >More info 0.67 >More info Col (I) rosette Original data GEO bulk
55 upf1 0.78 >More info 0.67 >More info WT whole plant Original data GEO bulk
56 mkk1/mkk2 control rep 0.80 >More info 0.65 >More info Col-0 Time 0 rep Original data GEO bulk
57 eds16 whole leaf 0h UI -0.70 >More info -0.75 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
58 8h-DC3000 avrRpm1 0.70 >More info 0.75 >More info 8h-DC3000 leaves Original data GEO bulk
59 ice1 6H Cold 0.79 >More info 0.65 >More info WT 6H Cold Original data GEO bulk
60 CAX1/CAX3 mutant 0.79 >More info 0.65 >More info Col whole plant Original data GEO bulk
61 BLM+INA 0.78 >More info 0.66 >More info CK BLM and INA seedling Original data
62 edr1 36 h powdery mildew 0.80 >More info 0.64 >More info Col-0 36 h powdery mildew Original data GEO bulk
63 seedlings-week-old RECA1-overexpressing
transgenic		 0.78 >More info 0.66 >More info seedlings-week-old Col-0 seedlings Original data
64 cpr5npr1svi1 0.78 >More info 0.65 >More info WT(COL) Original data GEO bulk
65 edr1 0 h powdery mildew 0.83 >More info 0.60 >More info Col-0 0 h powdery mildew Original data GEO bulk
66 pepr1-1 Pepr2-3 +Pep2 2h -0.73 >More info -0.70 >More info WT +Pep2 2h Pep2 Original data GEO bulk
67 gh3.5-1D 48 hpi 0.78 >More info 0.64 >More info Col-0 uninoculated Original data GEO bulk
68 Col ozone 3h 0.67 >More info 0.75 >More info Col clean-air 3h ozone Original data GEO bulk
69 cs26 long day 0.78 >More info 0.64 >More info Leaves-WT-LD leaf Original data GEO bulk
70 S15-118 0.81 >More info 0.61 >More info wt Original data GEO bulk
71 upf3 0.77 >More info 0.65 >More info WT whole plant Original data GEO bulk
72 35S:RPS4 eds1-2 24h -0.74 >More info -0.67 >More info 35S:RPS4 24h leaves Original data
73 ataf1-1 mutant Col-0 Bgh inoculated 0.75 >More info 0.66 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
74 +1.6 mM Tween 20 1 h. 0.58 >More info 0.83 >More info +distilled water 1 h. Original data GEO bulk
75 myb3 myb3r4d 0.71 >More info 0.70 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
76 CLO 4mM 0.84 >More info 0.56 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
77 20d after anthesis 0.77 >More info 0.63 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
78 camta2/3 warm 0.73 >More info 0.66 >More info WT warm entire aerial part Original data GEO bulk
79 aox1a:rpoTmp untreated 0.74 >More info 0.65 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
80 35S:RPS4 eds1-2 8h -0.73 >More info -0.66 >More info 35S:RPS4 8h leaves Original data
81 camta3-1 0.74 >More info 0.64 >More info WT Original data GEO bulk
82 ice1 3H Cold 0.77 >More info 0.61 >More info WT 3H Cold Original data GEO bulk
83 camta1/3 warm 0.72 >More info 0.66 >More info WT warm entire aerial part Original data GEO bulk
84 smg5-2 0.76 >More info 0.62 >More info WT whole plant Original data GEO bulk
85 Mutant siz1-3 (Drought) 0.76 >More info 0.62 >More info Col-0 (Drought) Original data GEO bulk
86 long 17-degree- 0.68 >More info 0.70 >More info control long Original data GEO bulk
87 siz1-3 drought 0.76 >More info 0.62 >More info Col-0 drought Original data GEO bulk
88 csn5 (csn5a-2 csn5b) light 0.79 >More info 0.59 >More info WT light Original data GEO bulk
89 Shoot -K 0.74 >More info 0.64 >More info Control-shoot Original data GEO bulk
90 GST 4 h (leaf) 0.67 >More info 0.71 >More info Mock 4 h (leaf) Original data Elicitor treatments
91 K starvation (shoot) 0.74 >More info 0.64 >More info Ws (shoot) Original data GEO bulk
92 wavy 0.72 >More info 0.65 >More info WT Original data GEO bulk
93 cpr5npr1 0.79 >More info 0.58 >More info WT(COL) Original data GEO bulk
94 Cor 24h 0.73 >More info 0.64 >More info Mock 24h Cor Original data GEO bulk
95 vtc1 (II) 0.69 >More info 0.68 >More info Col (II) rosette Original data GEO bulk
96 Primisulfuron EC50 0.72 >More info 0.64 >More info Carrier (primisulfuron) Original data GEO bulk
97 downy mildew cotyledons late stage 0.71 >More info 0.65 >More info mock inoculated Cotyledons Original data GEO bulk
98 camta1/2/3 warm 0.70 >More info 0.66 >More info WT warm entire aerial part Original data GEO bulk
99 rsa3-1 Na 24h 0.64 >More info 0.71 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
100 ice1 24H Cold 0.75 >More info 0.60 >More info WT 24H Cold Original data GEO bulk
101 IMI 4mM 0.82 >More info 0.53 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
102 Sulfometuron EC50 0.71 >More info 0.64 >More info Carrier Original data GEO bulk
103 Shoot -Cs 0.55 >More info 0.79 >More info Control-shoot Original data GEO bulk
104 pepr1-1 Pepr2-3 +Pep2 10h -0.74 >More info -0.60 >More info WT +Pep2 10h Pep2 Original data GEO bulk
105 cs26 short-day -0.73 >More info -0.61 >More info Leaves-WT-SD leaf Original data GEO bulk
106 WT-NOCO2 INFECTED 0.71 >More info 0.63 >More info WT-MOCK Original data GEO bulk
107 irradiated leaf (WT 1d) 0.76 >More info 0.57 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
108 E.orontii Infection 3 day 0.67 >More info 0.66 >More info Uninfection 3 day Original data Elicitor treatments
109 UV 0.74 >More info 0.59 >More info WT aerial region Original data GEO bulk
110 Cor hrpS 10h 0.73 >More info 0.60 >More info Mock 10h Cor hrpS Original data GEO bulk
111 abi4 vtc2 (I) 0.73 >More info 0.60 >More info Col (I) rosette Original data GEO bulk
112 rosette leaves fdh 0.68 >More info 0.64 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
113 npr1-3 DCA 48h 0.64 >More info 0.68 >More info npr1-3 MOCK 48h Original data GEO bulk
114 LTN008-2 aza-dc 0.78 >More info 0.54 >More info LTN012-2 Mock Original data
115 Col laser microdissected 5 dpi 0.66 >More info 0.66 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
116 PAHs stress 0.76 >More info 0.56 >More info exp control phenanthrene whole plants Original data GEO bulk
117 Triazolopyrimidine EC50 0.71 >More info 0.61 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
118 csn3-1 light 0.77 >More info 0.54 >More info WT light Original data GEO bulk
119 lht1 untreated 0.73 >More info 0.58 >More info WT untreated untreated leaf Original data GEO bulk
120 Col-0 DCA 48h 0.63 >More info 0.68 >More info Col-0 MOCK 48h Original data GEO bulk
121 eds16 whole leaf 7d UI -0.67 >More info -0.63 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
122 low CO2 + light 0.62 >More info 0.68 >More info normal CO2 + light Original data GEO bulk
123 pnp1-1 1wk +P 0.68 >More info 0.62 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
124 lht1 PstDC3000 48h 0.74 >More info 0.56 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
125 GST NPP1 4 h (leaf) 0.69 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
126 OE WRKY63.3 0.70 >More info 0.60 >More info OE WRKY40.4 none leaf Original data GEO bulk
127 cdpk6-yfp 0.69 >More info 0.61 >More info Kan seedlings Original data GEO bulk
128 P.syringae AvrRpt2 4 h (leaf) 0.72 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
129 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.82 >More info -0.48 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
130 A. lyrata -0.70 >More info -0.60 >More info A. thaliana mature leaves before flowering Original data GEO bulk
131 ein2-1 9 hpi A. brassicicola 0.72 >More info 0.57 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
132 Myzus persicae saliva 0.68 >More info 0.61 >More info Control Original data GEO bulk
133 aphid saliva treated 0.68 >More info 0.61 >More info control aphid saliva treated leaves Original data GEO bulk
134 efr-1 +elf18 10h -0.72 >More info -0.57 >More info WT +elf18 10h elf18 Original data GEO bulk
135 nas4x leaves - Fe -0.61 >More info -0.68 >More info WT leaves - Fe Leaves Original data GEO bulk
136 WT 2-4h Xanthomonas 0.66 >More info 0.62 >More info WT T0 Original data GEO bulk
137 Light 3day wt -0.75 >More info -0.53 >More info 0h wt Original data
138 AgNO3 3 h 0.68 >More info 0.60 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
139 CMP 4hr 0.66 >More info 0.61 >More info Acetone 4hr root Original data GEO bulk
140 abh1 -ABA 0.70 >More info 0.57 >More info Col-0 -ABA Original data GEO bulk
141 msh1 albino 0.71 >More info 0.55 >More info WT aerial part Original data GEO bulk
142 bak1-3 +Pep2 10h 0.64 >More info 0.62 >More info WT +Pep2 10h Pep2 Original data GEO bulk
143 WT cold 0.72 >More info 0.54 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
144 WT leaves - Fe 0.78 >More info 0.48 >More info WT leaves + Fe Leaves Original data GEO bulk
145 pmr4-1 control 0.71 >More info 0.55 >More info WT control uninoculated Original data GEO bulk
146 mkk1/mkk2 24h BTH rep 0.74 >More info 0.52 >More info Col-0 24h BTH rep Original data GEO bulk
147 Imidazolinone EC50 0.69 >More info 0.56 >More info Carrier (Imidazolinone) Original data GEO bulk
148 apk1 apk2 0.75 >More info 0.50 >More info Col0-control whole rosette Original data GEO bulk
149 vte2-1 3d vernalization 0.60 >More info 0.65 >More info WT 3d vernalization Original data GEO bulk
150 dense canopy 0.68 >More info 0.57 >More info single (control) petiole Original data GEO bulk
151 atmyc2 cop1 Seedling BL 0.61 >More info 0.64 >More info WT Seedling BL Original data GEO bulk
152 HopZ1a treated ulp1c ulp1d 0.68 >More info 0.56 >More info col Original data GEO bulk
153 coi1-16 ein2 sid2 ctrl -0.75 >More info -0.49 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
154 R. solani AG8 0.72 >More info 0.52 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
155 AFB1 0h 0.63 >More info 0.60 >More info Col 0h Leaf Original data GEO bulk
156 flu 0.62 >More info 0.61 >More info WT Col Original data GEO bulk
157 pnp1-1 3h +P 0.66 >More info 0.57 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
158 rpoTmp(line) MLD stressed 0.65 >More info 0.58 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
159 Octopus overexpressor 35SDYG25 0.76 >More info 0.47 >More info WS Original data GEO bulk
160 HopZ1a treated 0.68 >More info 0.55 >More info col Original data GEO bulk
161 leaf blade in D 0.58 >More info 0.65 >More info leaf blade in WL leaf blades Original data GEO bulk
162 Mature callus 0.65 >More info 0.57 >More info Young callus hypocotyls Original data GEO bulk
163 coi1-2 0.60 >More info 0.61 >More info Col-0 mock Whole seedling Original data GEO bulk
164 Col leaves 48h LT 0.71 >More info 0.50 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
165 Col-0 9 hpi A. brassicicola 0.69 >More info 0.52 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
166 WT 3h -P 0.63 >More info 0.58 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
167 GA 0.69 >More info 0.52 >More info none GA Rosette Original data GEO bulk
168 Fenclorim 4hr 0.60 >More info 0.61 >More info Acetone 4hr root Original data GEO bulk
169 Te ozone 0.73 >More info 0.48 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
170 anac017-2 AntimycinA 3h -0.64 >More info -0.56 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
171 Flagellin 4 h (leaf) 0.67 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
172 cop1 Seedling BL 0.66 >More info 0.54 >More info WT Seedling BL Original data GEO bulk
173 CMP 24hr 0.65 >More info 0.55 >More info Acetone 24hr root Original data GEO bulk
174 toc1-1-65hr 0.62 >More info 0.58 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
175 anac017-1 H2O2 3h -0.63 >More info -0.57 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
176 WT AntimycinA 3h 0.57 >More info 0.63 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
177 atmospheric CO2 low Mg shoot 0.75 >More info 0.45 >More info atmospheric CO2 normal Mg shoot Shoot Original data
178 wrky33 Bc inoculation 14h 0.75 >More info 0.44 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
179 pnp1-1 1wk -P 0.73 >More info 0.46 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
180 leaf rlt1-1rlt2-1 -0.64 >More info -0.55 >More info leaf Col-0 leaf Original data GEO bulk
181 WT +elf18 10h 0.74 >More info 0.45 >More info WT untreated elf18 Original data GEO bulk
182 aox1a(line) MLD stressed 0.68 >More info 0.51 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
183 Col0-PsmES4326-24hpi 0.58 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
184 B.cinerea 18 h infection 0.59 >More info 0.60 >More info Mock 18 h Original data Botrytis cinerea infection
185 DC3000 24h 0.67 >More info 0.52 >More info Mock 24h DC3000 Original data GEO bulk
186 Botrytis cinerea 18h 0.59 >More info 0.60 >More info control 18h Original data GEO bulk
187 DFPM 0.65 >More info 0.53 >More info control Original data GEO bulk
188 pho1 0.75 >More info 0.43 >More info Col2WT Original data GEO bulk
189 shoots bhlh100/101 0uM Fe 0.71 >More info 0.47 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
190 scrm-D 0.73 >More info 0.45 >More info Col-0 WT whole seedling Original data GEO bulk
191 des1 water 0.69 >More info 0.49 >More info WT water water leaf Original data GEO bulk
192 FOX line K19624 0.76 >More info 0.42 >More info empty vector control (T3) FOX lines Original data GEO bulk
193 Lipopolysaccaride4 h (leaf) 0.60 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
194 flu over-tAPX 0.58 >More info 0.60 >More info WT Col Original data GEO bulk
195 AvrRpt2 Col-0 6hpi 0.65 >More info 0.52 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
196 toc1-1-49hr 0.66 >More info 0.51 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
197 ein5-1 ski2-3 0.70 >More info 0.47 >More info Col-0 aerial tissue Original data
198 ataf1-1 mutant Col-0 Un-inoculated -0.77 >More info -0.40 >More info WT Col-0 Un-inoculated Original data GEO bulk
199 coi1-16 ein2 sid2 ozone 0.75 >More info 0.42 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
200 Cor 10h 0.57 >More info 0.60 >More info Mock 10h Cor Original data GEO bulk
201 toc1-1-53hr 0.73 >More info 0.44 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
202 sta1 0.76 >More info 0.40 >More info WT Original data GEO bulk
203 miR 0h 0.63 >More info 0.53 >More info Col 0h Leaf Original data GEO bulk
204 erf104-ko Flg22 4h 0.67 >More info 0.49 >More info erf104-ko H2O 4h Original data GEO bulk
205 HSP90 Reduced RNAi-B1 0.64 >More info 0.52 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
206 35S::ERF104 Flg22 4h 0.64 >More info 0.52 >More info 35S::ERF104 H2O 4h Original data GEO bulk
207 albino Ds13-2198-1 -0.73 >More info -0.43 >More info control Original data GEO bulk
208 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.72 >More info 0.44 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
209 Osmotic Stress 24 h (shoot) 0.69 >More info 0.46 >More info Stress mock 24 h (shoot) Original data Stress treatments
210 CT101 ozone 0.72 >More info 0.43 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
211 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.71 >More info 0.44 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
212 overexpresser LBD38 in -N -0.71 >More info -0.44 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
213 oas-a1.1 Cd 18h 0.51 >More info 0.64 >More info Cd 18h root Root Original data GEO bulk
214 hrpA 7h 0.63 >More info 0.52 >More info Mock 7h hrpA Original data GEO bulk
215 Heat shock optimum 0.50 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
216 leaf chr11-1chr17-1 0.72 >More info 0.43 >More info leaf Col-0 leaves Original data GEO bulk
217 ex1ex2flu dark 8hours/30 minute light -0.75 >More info -0.39 >More info col dark 8hours/30 minute light Original data GEO bulk
218 Constans-mutant 0.67 >More info 0.47 >More info Col control above-ground whole plant Original data GEO bulk
219 Leafminer damaged seedlings 0.58 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
220 35:SUB1A 0.74 >More info 0.40 >More info WT whole seedling Original data GEO bulk
221 tt4 0.64 >More info 0.50 >More info Col-0 aerial part Original data
222 D2O 0.77 >More info 0.37 >More info H2O seedling Original data GEO bulk
223 eds16 whole leaf 7dpi -0.58 >More info -0.56 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
224 Chitosan 3h Treatment 0.63 >More info 0.51 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
225 Col whole leaf 1dpi -0.66 >More info -0.48 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
226 psae1-3 stn7-1 0.73 >More info 0.41 >More info WS rosette leaves Original data GEO bulk
227 sfr3 cold 0.56 >More info 0.57 >More info WT cold All aerial tissue Original data GEO bulk
228 atgsnor1-1 -0.75 >More info -0.38 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
229 atgsnor1-1-avrB-6h 0.59 >More info 0.54 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
230 nas4x leaves + Fe 0.77 >More info 0.36 >More info WT leaves + Fe Leaves Original data GEO bulk
231 Laer MeJA 1h -0.64 >More info -0.49 >More info Laer Control leaf discs Original data GEO bulk
232 TNT-seedlings 0.48 >More info 0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
233 AvrRpm1 2 h (leaf) 0.59 >More info 0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
234 BLM 0.67 >More info 0.45 >More info CK BLM seedling Original data
235 Mutant ufo-1(flower) 0.64 >More info 0.48 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
236 abi4-102 (II) 0.65 >More info 0.47 >More info Col (II) rosette Original data GEO bulk
237 camta1/2/3 24h cold 0.60 >More info 0.52 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
238 apum23 0.60 >More info 0.52 >More info WT (Col-3) aerial parts Original data GEO bulk
239 msh1 recA3 heat shock 0.56 >More info 0.56 >More info WT heat shock above-ground parts Original data GEO bulk
240 P.syringae vir 4 h (leaf) 0.37 >More info 0.75 >More info Mock 4 h (leaf) Original data Elicitor treatments
241 WT Bc inoculation 14h 0.71 >More info 0.41 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
242 Col-0 ozone 0.71 >More info 0.41 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
243 del1-1 5dpi 0.78 >More info 0.33 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
244 hst5 0.57 >More info 0.54 >More info Col-0 Original data GEO bulk
245 WT +elf18 2h 0.58 >More info 0.53 >More info WT untreated elf18 Original data GEO bulk
246 hrcC 0.60 >More info 0.51 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
247 nar1-4/- 0.53 >More info 0.58 >More info WT whole seedling Original data GEO bulk
248 Mutant NahG(leaf) -0.62 >More info -0.49 >More info Col-0 (leaf) Original data GEO bulk
249 petiole in D 0.57 >More info 0.54 >More info petiole in WL petioles Original data GEO bulk
250 WT Col-0 Bgh inoculated 0.53 >More info 0.58 >More info WT Col-0 Un-inoculated Original data GEO bulk
251 Col-Luc WT 3h antimycin A 0.63 >More info 0.48 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
252 Col whole leaf 3dpi 0.40 >More info 0.71 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
253 Atwrky63 -0.71 >More info -0.39 >More info Col0 none leaf Original data GEO bulk
254 irradiated leaf (cmt 5d) 0.68 >More info 0.42 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
255 AtLysM RLK1 mutant water 0.63 >More info 0.47 >More info WT water Original data GEO bulk
256 seedlings +5AC 0.67 >More info 0.43 >More info control seedlings 10-day old whole seedling Original data GEO bulk
257 atmospheric CO2 high Mg shoot 0.75 >More info 0.35 >More info atmospheric CO2 normal Mg shoot Shoot Original data
258 Mutant coi1(leaf) -0.55 >More info -0.55 >More info Col-0 (leaf) Original data GEO bulk
259 toc1-1-69hr 0.65 >More info 0.45 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
260 4d red light grown hmr-5 seedlings 0.53 >More info 0.57 >More info 4d red light grown WT(Col-0) seedlings Original data
261 npr1 sni1 brca2a SA -0.62 >More info -0.48 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
262 Mutant ga1-5 -0.56 >More info -0.54 >More info Ler-1 Original data Comparison of plant hormone related mutant
263 GO5; 0h switch to ambient CO2 concentrations; -0.76 >More info -0.33 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
264 Pto inoculated 0.65 >More info 0.44 >More info col Original data GEO bulk
265 WT in -N 0.64 >More info 0.45 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
266 mkk2 24h BTH rep 0.57 >More info 0.52 >More info Col-0 24h BTH rep Original data GEO bulk
267 toc1-1-77hr 0.71 >More info 0.38 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
268 WT +Pep2 10h 0.71 >More info 0.38 >More info WT untreated Pep2 Original data GEO bulk
269 csn4-1 dark 0.69 >More info 0.40 >More info WT light Original data GEO bulk
270 sfr6 drought -0.48 >More info -0.61 >More info WT drought All aerial tissue Original data GEO bulk
271 Phaseolicola 2 h (leaf) 0.62 >More info 0.46 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
272 INA 0.62 >More info 0.46 >More info CK INA seedling Original data
273 Mutant cry1 (High Light) -0.67 >More info -0.41 >More info Col-0 (High Light) Original data GEO bulk
274 R. solani AG2-1 0.62 >More info 0.46 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
275 total mRNA eif3k 0.59 >More info 0.49 >More info total mRNA WT aerial part Original data GEO bulk
276 4h decapitation -0.52 >More info -0.56 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
277 toc1-1-57hr 0.61 >More info 0.47 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
278 cry1 high light -0.67 >More info -0.41 >More info Col-O high light Original data GEO bulk
279 cov1 cov2 stem Base 0.63 >More info 0.44 >More info WT stem Base stem Base Original data GEO bulk
280 eds16 whole leaf 3dpi -0.62 >More info -0.45 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
281 0.5h light (+Lincomycin) 0.62 >More info 0.45 >More info 0.5h light (-Lincomycin) seedlings Original data GEO bulk
282 FLIGHT TAGESB plate6 SHOOTS 0.55 >More info 0.52 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
283 Elevated CO2 leaf primordia 0.56 >More info 0.51 >More info Ambient CO2 leaf primordia leaf primordia Original data
284 35S:RPS4 eds1-2 2h -0.48 >More info -0.59 >More info 35S:RPS4 2h leaves Original data
285 brm-101 0.56 >More info 0.50 >More info Ler Original data GEO bulk
286 FOX line K16331 0.63 >More info 0.43 >More info empty vector control (T3) FOX lines Original data GEO bulk
287 SA 0.57 >More info 0.49 >More info WT mock Whole seedling Original data GEO bulk
288 Col-0 mbs1-1 HL 3h -0.57 >More info -0.49 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
289 C24 ozone 0.73 >More info 0.33 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
290 aphid infested 0.66 >More info 0.40 >More info control aphid infested Leaves Original data GEO bulk
291 WT +Pep2 2h 0.71 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
292 nia1nia2 0.63 >More info 0.43 >More info Col-0 whole seedlings Original data GEO bulk
293 aphid infested 0.66 >More info 0.40 >More info CTR Original data GEO bulk
294 Tsu -Fe 48h Shoots 0.52 >More info 0.54 >More info Tsu +Fe 24h Shoots Original data GEO bulk
295 Laer pretreat GA Flg22 1h 0.35 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
296 mpk6-ko Flg22 4h 0.59 >More info 0.46 >More info mpk6-ko H2O 4h Original data GEO bulk
297 Tsu -Fe 24h Shoots 0.64 >More info 0.41 >More info Tsu +Fe 24h Shoots Original data GEO bulk
298 35S::PI ap3-3 35S::AP-GR +DEX 0.44 >More info 0.61 >More info 0hr DEX Original data GEO bulk
299 PBZ 0.57 >More info 0.48 >More info none PBZ Rosette Original data GEO bulk
300 GO5; 8h switch to ambient CO2 concentrations; 0.47 >More info 0.58 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
301 npr1-1 SA -0.63 >More info -0.41 >More info Col-0 SA complete seedling Original data
302 pad4-PsmES4326-24hpi -0.65 >More info -0.39 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
303 KO-nudx19 leaves 0.59 >More info 0.45 >More info WT leaves rosette leaves Original data
304 npr1 sni1 ssn2 -0.67 >More info -0.37 >More info npr1 sni1 water water seedling Original data GEO bulk
305 sid2-1 warm -0.67 >More info -0.37 >More info WT warm entire aerial part Original data GEO bulk
306 ERF96OE 0.63 >More info 0.41 >More info WT leaf Original data
307 A. halleri -0.57 >More info -0.47 >More info A. thaliana mature leaves before flowering Original data GEO bulk
308 pmr4-1 powdery mildew 0.69 >More info 0.35 >More info WT powdery mildew uninoculated Original data GEO bulk
309 phyB mutant 22C 10hrs -0.56 >More info -0.48 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
310 IAA7mII over-expressor IAA Treated 0.35 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
311 oligomycin 4 h 0.58 >More info 0.45 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
312 Leafminer locally damaged thaliana seedlings 0.58 >More info 0.45 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
313 DC3000 2 h (leaf) 0.52 >More info 0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
314 sdg2 0.66 >More info 0.37 >More info wt seedling Original data GEO bulk
315 ARR22-ox (t-zeatin 3 h) 0.58 >More info 0.45 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
316 Fenclorim 24hr 0.51 >More info 0.51 >More info Acetone 24hr root Original data GEO bulk
317 Pst-DC3000(avrRpm1)-4hpi 0.63 >More info 0.39 >More info Pst-DC3000-4hpi Original data GEO bulk
318 mil4 BTH 0.61 >More info 0.41 >More info Col BTH rosettes Original data GEO bulk
319 1h light (+Lincomycin) 0.67 >More info 0.35 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
320 Col-0 C2H4 24h 0.58 >More info 0.44 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
321 cat2-2; 8h switch to ambient CO2 concentrations; 0.66 >More info 0.35 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
322 Stem tissue 5 days NAA 0.62 >More info 0.39 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
323 Time-0 chr11-1chr17-1 -0.55 >More info -0.46 >More info Time-0 Col-0 leaf explants Original data
324 til1-1 22C 0.58 >More info 0.43 >More info Col-0 22C Original data GEO bulk
325 rcf1-1 cold 0h 0.50 >More info 0.51 >More info WT cold 0h Control seedlings Original data GEO bulk
326 8hr-pH4.5 0.47 >More info 0.54 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
327 Nicotinamide-81hr 0.59 >More info 0.41 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
328 erf5 erf6 -0.58 >More info -0.42 >More info WT+water water seedlings Original data GEO bulk
329 csn4-1 mutant 0.61 >More info 0.39 >More info WT dark Original data GEO bulk
330 OE WRKY40.4 high light 0.53 >More info 0.47 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
331 CMV-A2b mutant 0.64 >More info 0.36 >More info Mock-At Aerial tissues Original data GEO bulk
332 Cycloheximide 3 h 0.52 >More info 0.48 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
333 AtMYB30-ox 90-105 min Xanthomonas 0.54 >More info 0.46 >More info WT 90-105 min Xanthomonas Original data GEO bulk
334 pif4pif5 mut dark -0.37 >More info -0.63 >More info WT dark Original data GEO bulk
335 M6PR transgenic 0mM NaCl 0.59 >More info 0.40 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
336 npr1 sni1 ssn2 SA -0.61 >More info -0.38 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
337 Nicotinamide-53hr 0.62 >More info 0.37 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
338 miR393 flg22 2h 0.56 >More info 0.43 >More info WT 0h Leaf tissue Original data GEO bulk
339 toc1-1-85hr 0.57 >More info 0.42 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
340 long 14-degree- 0.66 >More info 0.33 >More info control long Original data GEO bulk
341 penta Alternaria 3dpi 0.69 >More info 0.30 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
342 toc1-1-81hr 0.54 >More info 0.45 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
343 SCR-GR Time 1H Dex 0.45 >More info 0.54 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
344 hira-root -0.43 >More info -0.56 >More info WT-root root Original data
345 dor control 0.74 >More info 0.24 >More info WT control Original data GEO bulk
346 Glyphosate EC50 0.52 >More info 0.46 >More info Carrier (Glyphosate) Original data GEO bulk
347 Nicotinamide-65hr 0.61 >More info 0.37 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
348 sicy-192 gun1-101 cotyledons 0.52 >More info 0.46 >More info WT cotyledons cotyledons Original data
349 siliques AtHb1 control 0.46 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
350 HSP90 Reduced RNAi-C1 0.47 >More info 0.51 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
351 Dex-rga(delta17) 4h GA4 -0.44 >More info -0.54 >More info Vector 4h GA4 shoots Original data GEO bulk
352 seedling 3h after Gamma WT 0.38 >More info 0.60 >More info seedling day 1 unirradiated WT 3h Original data
353 Col-0 under 4 days salt 0.55 >More info 0.42 >More info Col-0 under control 4 days salt treatment rosette Original data
354 seedlings protease IV 0.58 >More info 0.39 >More info seedlings nontreated control whole seedling Original data
355 IRP1-OE-Fe--shoot 0.59 >More info 0.38 >More info COL-0-Fe--shoot shoot Original data
356 scrm-D:mute 0.60 >More info 0.37 >More info Col-0 WT whole seedling Original data GEO bulk
357 SPT4-R3 seedlings0 DAS 0.57 >More info 0.40 >More info Col-0 seedlings0 DAS seedlings Original data
358 vte2 leaves 48h LT 0.56 >More info 0.41 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
359 vtc2-1 -0.56 >More info -0.40 >More info Col-0 whole plant Original data GEO bulk
360 AsAKiin11 T1 0.58 >More info 0.38 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
361 P.p 6hai 0.54 >More info 0.42 >More info At-Control roots Original data GEO bulk
362 E.coli TUV86 2 fliC 7h 0.54 >More info 0.42 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
363 Dry midday -0.65 >More info -0.31 >More info Wet midday water-limited whole rosette Original data GEO bulk
364 plant (tga2-5-6) 4h phytoprostane A1 0.53 >More info 0.43 >More info plant (tga2-5-6) 4h control Original data GEO bulk
365 21h-DC3000 avrRpm1 -0.62 >More info -0.34 >More info 21h-DC3000 leaves Original data GEO bulk
366 MYB12OX 0.61 >More info 0.35 >More info Col-0 aerial part Original data
367 6h +Pi -0.46 >More info -0.50 >More info 6h -Pi root Original data GEO bulk
368 overexpresser LBD37 in -N -0.67 >More info -0.28 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
369 AtMYB30-ox 2-4h Xanthomonas 0.50 >More info 0.45 >More info WT 2-4h Xanthomonas Original data GEO bulk
370 Shoot P recovery 0.72 >More info 0.23 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
371 root Dosed gold 0.51 >More info 0.44 >More info root No gold .125 mM gold 24 h roots Original data
372 eds16 laser microdissected 5 dpi -0.63 >More info -0.32 >More info Col laser microdissected 5 dpi LMD leaf epidermal and mesophyll cells Original data GEO bulk
373 JMJ24 knockout 0.64 >More info 0.31 >More info WT Original data GEO bulk
374 WT chitooctaose 0.51 >More info 0.44 >More info WT water Original data GEO bulk
375 0.125 mM gold 24 h 0.51 >More info 0.44 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
376 HSP90 Reduced RNAi-A2 0.54 >More info 0.41 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
377 OE WRKY40.4 -0.63 >More info -0.31 >More info OE WRKY40.4 none leaf Original data GEO bulk
378 Compost 0.62 >More info 0.32 >More info Perlite Compost Original data GEO bulk
379 cell culture 4 h phytoprostane A1 0.44 >More info 0.50 >More info cell culture 4 h control Original data GEO bulk
380 abi4-102 (I) 0.62 >More info 0.31 >More info Col (I) rosette Original data GEO bulk
381 tbf1-SA -0.50 >More info -0.43 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
382 GR-REV 30min 0.60 >More info 0.33 >More info Col 30min Original data GEO bulk
383 IRP1-OE-Ctrl--shoot 0.68 >More info 0.24 >More info COL-0-Ctrl--shoot shoot Original data
384 rcf1-1 cold 24h 0.38 >More info 0.54 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
385 Laer treat paclobutrazol (PAC) 0.50 >More info 0.42 >More info Laer Control leaf discs Original data GEO bulk
386 C24 UV1 -0.73 >More info -0.19 >More info C24 mock UV seedling Original data
387 ORS1 induced 0.66 >More info 0.25 >More info mock-induced rosette leaves Original data GEO bulk
388 toc1-1-73hr 0.55 >More info 0.36 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
389 Col whole leaf 6hpi 0.53 >More info 0.38 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
390 npr1 sni1 SA 0.56 >More info 0.35 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
391 WT 30μM arsenate 8 hours. 0.53 >More info 0.38 >More info WT control (not supplemented). Original data
392 A. thaliana-A. halleri hybrid -0.54 >More info -0.37 >More info A. thaliana mature leaves before flowering Original data GEO bulk
393 WT+H2O2 0.38 >More info 0.53 >More info WT H2O2 Original data GEO bulk
394 seedling 24h after HZE WT 0.34 >More info 0.57 >More info seedling day 2 unirradiated WT 24h Original data
395 JMJ24-IBM1 double knockout -0.56 >More info -0.34 >More info WT Original data GEO bulk
396 Nicotinamide-93hr 0.54 >More info 0.36 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
397 Light 3day hml -0.77 >More info -0.13 >More info 0h hml Original data
398 IRP1-OE-Ctrl--root 0.54 >More info 0.36 >More info COL-0-Ctrl--root root Original data
399 5-Triiodobenzoic acid3 h 0.39 >More info 0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
400 Whole root - low pH 12H 0.40 >More info 0.50 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
401 spx1 spx2 complete 0.70 >More info 0.20 >More info WT complete seedlings Original data
402 Senescing leaf 0.59 >More info 0.31 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
403 P.p 30hai 0.55 >More info 0.34 >More info At-Control roots Original data GEO bulk
404 expressing C2 MeJA -0.55 >More info -0.34 >More info LUC2T Original data GEO bulk
405 cat2-long-day 2d -0.64 >More info -0.25 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
406 toc1-1-61hr 0.50 >More info 0.39 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
407 Nicotinamide-73hr 0.52 >More info 0.37 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
408 Nicotinamide-49hr 0.57 >More info 0.32 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
409 WT mitomycin C 0.60 >More info 0.29 >More info WT mock shoot apical meristem Original data
410 Nicotinamide-57hr 0.58 >More info 0.31 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
411 Rsch CA -0.54 >More info -0.34 >More info Col CA Leaves Original data
412 leaf blade in FRD 0.54 >More info 0.34 >More info leaf blade in WL leaf blades Original data GEO bulk
413 Salt Stress 24 h (root) 0.54 >More info 0.34 >More info Stress mock 24 h (root) Original data Stress treatments
414 penta Control 0.62 >More info 0.26 >More info Laer Control leaf discs Original data GEO bulk
415 4C 2h(SOIL) 0.65 >More info 0.23 >More info 4C 0h(SOIL) Original data GEO bulk
416 Nicotinamide-69hr 0.53 >More info 0.35 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
417 Laer Flg22 2h 0.60 >More info 0.28 >More info Laer Control leaf discs Original data GEO bulk
418 myb50 cork -0.50 >More info -0.38 >More info wt cork cork Original data GEO bulk
419 Mutant sav3-2 (WL) 0.35 >More info 0.53 >More info Col-0 (WL) Original data GEO bulk
420 sav3-2 light 0.35 >More info 0.53 >More info Col-0 light seedlings Original data GEO bulk
421 wrky72-1-NOCO2 INFECTED 0.55 >More info 0.32 >More info WT-NOCO2 INFECTED Original data GEO bulk
422 E.coli 0157 H7 7h 0.54 >More info 0.33 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
423 Mutant sav3-2 (SH) 0.32 >More info 0.55 >More info Col-0 (SH) Original data GEO bulk
424 sav3-2 shade 0.32 >More info 0.55 >More info Col-0 shade seedlings Original data GEO bulk
425 aox1a(line) untreated -0.51 >More info -0.36 >More info WT(Col0) untreated (control aox1a) leaf Original data
426 glk1 glk2 GLK1-GR +DEX 24h -0.61 >More info -0.26 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
427 G3P 0.70 >More info 0.17 >More info Mock distal leaves Original data GEO bulk
428 Sepals stage15 0.58 >More info 0.29 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
429 MIL4 ox BTH 0.58 >More info 0.29 >More info Col BTH Original data GEO bulk
430 csn5 (csn5a-2 csn5b) dark 0.52 >More info 0.34 >More info WT dark Original data GEO bulk
431 mbd6 mutant thaliana 10-day-old seedling 0.55 >More info 0.31 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
432 Bur-0-3h IAA 0.55 >More info 0.31 >More info Bur-0h IAA whole plant Original data GEO bulk
433 nia1nia2noa1-2 0.52 >More info 0.34 >More info Col-0 whole seedlings Original data GEO bulk
434 WT H2O2 3h 0.30 >More info 0.56 >More info WT water 3h 3h_H2O2 Original data GEO bulk
435 shoot-10 μM DEX- 6 hr 0.51 >More info 0.35 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
436 Nicotinamide-61hr 0.56 >More info 0.29 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
437 sex1-3 0.53 >More info 0.32 >More info Col-WT leaves Original data GEO bulk
438 AFB1 flg22 2h 0.52 >More info 0.33 >More info WT 0h Leaf tissue Original data GEO bulk
439 Starch sheath 5 days MS incubation 0.33 >More info 0.52 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
440 Laer Flg22+GA 2h 0.57 >More info 0.28 >More info Laer Control leaf discs Original data GEO bulk
441 sid2-avrB-6h -0.50 >More info -0.35 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
442 Polysomal RNA 35S:HF-RPL18 0.62 >More info 0.23 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
443 hrpA fliC 7h 0.60 >More info 0.25 >More info Mock 7h hrpA fliC Original data GEO bulk
444 gis5 seedlings 0.52 >More info 0.32 >More info WT seedlings Whole seedlings (leaves + roots) Original data
445 SOS1 0mM NaCl 0.50 >More info 0.34 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
446 35S::IaTCP 0.52 >More info 0.32 >More info thaliana control secondary inflorescence Original data
447 pap1-D/tt4 0.51 >More info 0.33 >More info Col-0 aerial part Original data
448 gpa1 -ABA GC -0.29 >More info -0.55 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
449 Shoot -P -0.75 >More info -0.09 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
450 prors1-2 leaves 0.53 >More info 0.30 >More info Col-0 leaves leaves Original data
451 16C 10h -0.30 >More info -0.53 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
452 dor drought 0.60 >More info 0.23 >More info WT drought Original data GEO bulk
453 epiF3 -0.53 >More info -0.29 >More info WT Col-0 aerial part Original data
454 Whole root - low pH 6H 0.27 >More info 0.55 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
455 E2Fa-Dpa 0.60 >More info 0.22 >More info WT Original data GEO bulk
456 Botrytis cinerea 48h 0.59 >More info 0.23 >More info control 48h Original data GEO bulk
457 anti-sense for AtAOX1a 0.59 >More info 0.23 >More info WT Original data GEO bulk
458 E.orontii Infection 6 h 0.25 >More info 0.57 >More info Uninfection 6 h Original data Elicitor treatments
459 Mutant ag-12(flower) 0.55 >More info 0.26 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
460 Mutant clv3-7(flower) -0.50 >More info -0.31 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
461 Mutant axr3-1 0.53 >More info 0.28 >More info Col Original data GEO bulk
462 auxin and brassinazole seedlings 0.54 >More info 0.27 >More info auxin seedlings Original data GEO bulk
463 vte2 leaves 120h LT 0.77 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
464 eds16 whole leaf 1dpi -0.20 >More info -0.61 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
465 polysome mRNA eif3k 0.19 >More info 0.62 >More info polysome mRNA WT aerial part Original data GEO bulk
466 SA Treated 0.73 >More info 0.08 >More info Water Original data GEO bulk
467 mbd4 mutant thaliana 10-day-old seedling 0.54 >More info 0.26 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
468 brat1 0.60 >More info 0.20 >More info WT Original data
469 tga2 tga5 tga6 ctrl -0.53 >More info -0.27 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
470 tbf1-elf18 -0.52 >More info -0.28 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
471 8h-DC3000 hrpA 0.60 >More info 0.20 >More info 8h-DC3000 leaves Original data GEO bulk
472 46T-CK 0.27 >More info 0.53 >More info WT-CK none Original data
473 Mutant iaa17-6 0.55 >More info 0.24 >More info Col Original data GEO bulk
474 Col upon hypoxia 6 hrs 0.50 >More info 0.29 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
475 Col-0 Flg22 4h 0.52 >More info 0.27 >More info Col-0 H2O 4h Original data GEO bulk
476 35S-MIF1 dark grown 0.50 >More info 0.29 >More info Dark-grown WT control Original data GEO bulk
477 Total RNA 35S:HF-RPL18 cold 0.68 >More info 0.11 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
478 Heat 2 days recovery 0.29 >More info 0.50 >More info Mock 2 days recovery seedling Original data GEO bulk
479 12h-DC3000 avrRpm1 0.57 >More info 0.22 >More info 12h-DC3000 leaves Original data GEO bulk
480 Col leaves 120h LT 0.58 >More info 0.21 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
481 0h hml 0.73 >More info 0.05 >More info 0h wt Original data
482 arr10 arr12 tZ 0.54 >More info 0.24 >More info WT tZ Original data GEO bulk
483 TaFLS overexpression line (OE2) -0.55 >More info -0.23 >More info Col-0 Rosette leaves Original data
484 16C 4hs -0.24 >More info -0.54 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
485 Mutant cry1 -0.57 >More info -0.21 >More info Col-0 Original data GEO bulk
486 cry1 low light -0.57 >More info -0.21 >More info Col-O low light Original data GEO bulk
487 Mutant ap2-6(flower) -0.57 >More info -0.20 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
488 Mutant arf2-6 (IAA) -0.55 >More info -0.22 >More info Col (IAA) Original data GEO bulk
489 ape2 high light 0.55 >More info 0.22 >More info Ws-2 high light Original data GEO bulk
490 ARR21C-ox 0.56 >More info 0.21 >More info Col-0 Original data ARR21C overexpression
491 aerial organ callus inducing medium 48 h 0.51 >More info 0.26 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
492 Bur-0-1h IAA 0.60 >More info 0.17 >More info Bur-0h IAA whole plant Original data GEO bulk
493 downy mildew cotyledons early stage 0.26 >More info 0.51 >More info mock inoculated Cotyledons Original data GEO bulk
494 Atss3 Light4 -0.51 >More info -0.25 >More info Atss3 Dark0.5 Original data GEO bulk
495 mil4 0.66 >More info 0.10 >More info Col rosettes Original data GEO bulk
496 C24-3h IAA 0.51 >More info 0.25 >More info C24-0h IAA whole plant Original data GEO bulk
497 Ambient CO2 LIMITING N DAY 0.61 >More info 0.15 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
498 cat2-2; 0h switch to ambient CO2 concentrations; -0.52 >More info -0.23 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
499 OE-HRA1 2HS  0.60 >More info 0.15 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
500 nhx5-1/nhx6 0.50 >More info 0.25 >More info WT Rosette leaf Original data GEO bulk
501 MPK6 ox Shoot Hypoxia 0.53 >More info 0.22 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
502 t-zeatin 0.5 h -0.25 >More info -0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
503 vte2-1 1d vernalization 0.25 >More info 0.50 >More info WT 1d vernalization Original data GEO bulk
504 Laer Flg22 1h 0.52 >More info 0.22 >More info Laer Control leaf discs Original data GEO bulk
505 pad2-PsmES4326-24hpi -0.51 >More info -0.23 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
506 Differentiation 12h 0.50 >More info 0.24 >More info Differentiation 0h leaves Original data
507 Laer Flg22+GA 1h 0.51 >More info 0.23 >More info Laer Control leaf discs Original data GEO bulk
508 Total RNA 35S:HF-RPL18 0.67 >More info 0.07 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
509 CeO2 germinant -0.22 >More info -0.52 >More info Millipore Water germinant CeO2 seedling Original data
510 WT NAA/flg 2h 0.54 >More info 0.19 >More info WT 0h Leaf tissue Original data GEO bulk
511 Aerobic prt6 0.59 >More info 0.14 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
512 plant (tga2-5-6) 4h control 0.60 >More info 0.12 >More info plant (Col-0) 4h control Original data GEO bulk
513 Elevated CO2 LIMITING N NIGHT 0.51 >More info 0.21 >More info Elevated CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
514 Drought Stress 24 h (shoot) 0.52 >More info 0.20 >More info Stress mock 24 h (shoot) Original data Stress treatments
515 Cd 24h root -0.51 >More info -0.21 >More info WT-Untreated Shoot Original data GEO bulk
516 Mutant tga2_5_6 0.60 >More info 0.12 >More info Col-0 Original data GEO bulk
517 calcicole ecotype Cal-0 0.64 >More info 0.07 >More info Col-4 1 mM CaCl2 Original data GEO bulk
518 rpl24 total 0.52 >More info 0.19 >More info WT total seedling shoot/aerial seedling Original data
519 rao1-1 0.53 >More info 0.18 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
520 TaFLS overexpression line (OE1) -0.62 >More info -0.09 >More info Col-0 Rosette leaves Original data
521 express RfBP -0.53 >More info -0.17 >More info WT green part of the whole plant Original data GEO bulk
522 CHS-silenced type -0.55 >More info -0.15 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
523 hexa mutant (higher order mutant) 0.51 >More info 0.19 >More info col control (higher order mutant) Original data GEO bulk
524 long 12-degree- 0.50 >More info 0.20 >More info control long Original data GEO bulk
525 ABA DFPM 0.52 >More info 0.17 >More info control Original data GEO bulk
526 GST-overexpression seedlings control 0.55 >More info 0.14 >More info WT seedlings control Seedlings Original data
527 ddm1 F6 inflorescence 0.62 >More info 0.07 >More info wt Col inflorescence unopened flower buds Original data
528 ago4-1 0.51 >More info 0.17 >More info WT La-er whole plants Original data GEO bulk
529 vtc2 mature somatic embryo 0.52 >More info 0.16 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
530 NJ15 0.15 >More info 0.53 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
531 GO5; harvested 8h continiously maintained in high
CO2;		 -0.58 >More info -0.10 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
532 Wt-BA-sample -0.51 >More info -0.16 >More info Wt-dmso-sample seedling Original data
533 prmt5-5 -0.56 >More info -0.11 >More info WT Col continuous light Aerial tissue Original data GEO bulk
534 AAF-OX 0.52 >More info 0.14 >More info Col-0 Rosette leaf Original data GEO bulk
535 HairpinZ 4 h (leaf) 0.69 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
536 ex1 flu dark 8hours/30 minute light -0.53 >More info -0.12 >More info col dark 8hours/30 minute light Original data GEO bulk
537 MYB51 OE -0.52 >More info -0.13 >More info WT for ATR1/MYB51 Original data GEO bulk
538 MIL4 ox 0.60 >More info 0.05 >More info Col Original data GEO bulk
539 nhx5-2/nhx6 0.51 >More info 0.13 >More info WT Rosette leaf Original data GEO bulk
540 rao1-2 0.52 >More info 0.12 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
541 pmr5 0.52 >More info 0.12 >More info Col-0 rosette Original data GEO bulk
542 Mh0 UV -0.70 >More info 0.06 >More info Mh0 mock UV seedling Original data
543 Dark 6h hml -0.51 >More info -0.12 >More info 0h hml Original data
544 pvip1 pvip2 seedling 0.65 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
545 nhx5 0.54 >More info 0.08 >More info WT Rosette leaf Original data GEO bulk
546 upb1-1 meristematic zone -0.11 >More info -0.51 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
547 RRE2 0.06 >More info 0.55 >More info Col C Original data GEO bulk
548 Col-0 DCA 6d 0.52 >More info 0.09 >More info Col-0 MOCK 6d Original data GEO bulk
549 ABA JA 24h 0.11 >More info 0.50 >More info EtOH 24h 24hr Original data GEO bulk
550 ACN1-2 0.10 >More info 0.51 >More info col-7 Original data GEO bulk
551 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.08 >More info -0.53 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
552 ein2 0.56 >More info 0.04 >More info Col-0 Leaves Original data GEO bulk
553 brat1nrpe1 0.62 >More info -0.02 >More info WT Original data
554 seedlings + TSA 0.53 >More info 0.06 >More info control seedlings 10-day old whole seedling Original data GEO bulk
555 bri1-116 -0.15 >More info 0.73 >More info Col seedling Original data GEO bulk
556 ANAC102 knock-out -0.56 >More info -0.00 >More info Col-0 Original data GEO bulk
557 Col PSTDC3000 24h 0.68 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
558 OE-HRA1 NS  0.56 >More info -0.01 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
559 WT roots - Fe 0.56 >More info -0.01 >More info WT roots + Fe Roots Original data GEO bulk
560 FarRed Light 45min 0.05 >More info -0.60 >More info White Light 45min Original data Light treatments
561 Aerobic e1 ate2 0.50 >More info 0.04 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
562 P. infestans 6 h (leaf) 0.69 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
563 Bay-0-30min IAA 0.52 >More info 0.01 >More info Bay-0-0h IAA whole plant Original data GEO bulk
564 xrn4-5 flower -0.52 >More info -0.01 >More info Col-0 flower inflorescence Original data GEO bulk
565 FLIGHT TAGESB plate6 ROOTS -0.02 >More info 0.55 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
566 cat2-long-day 4d -0.66 >More info 0.16 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
567 seed germinating in countinuous light 24h SL -0.17 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
568 Polysomal RNA 35S:HF-RPL18 cold 0.57 >More info -0.07 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
569 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
570 ahg2-1sid2-2 -0.03 >More info 0.51 >More info WT (Col) control Original data GEO bulk
571 Red/FR Light45min -0.09 >More info 0.56 >More info FarRed Light 45min Original data Light treatments
572 rdr6-15 0.54 >More info -0.09 >More info Col-0 plant inflorescence Original data
573 Bay-0-3h IAA 0.52 >More info -0.07 >More info Bay-0-0h IAA whole plant Original data GEO bulk
574 gpa1-4/agb1-2 clean-air 3h -0.60 >More info 0.18 >More info Col clean-air 3h clean-air Original data GEO bulk
575 cat2-short-day 4d -0.67 >More info 0.27 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
576 tt4 -0.52 >More info 0.16 >More info WT aerial region Original data GEO bulk
577 Shoot apex inflorescence (after bolting) -0.37 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
578 0h ivd 0.41 >More info -0.61 >More info 0h wt Original data