4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on inhibitor A Treated
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List of experiments correlated with "inhibitor A Treated"  Help Download transcriptome of top 30
Score Experiment Correlation from
inhibitor A Treated		 Correlation to
inhibitor A Treated		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 inhibitor A Treated 1.00 >More info 1.00 >More info Negative Control Original data GEO bulk
2 IAA/inhibitor A Treated 0.89 >More info 0.91 >More info IAA Treated Original data GEO bulk
3 inhibitor B Treated 0.89 >More info 0.82 >More info Negative Control Original data GEO bulk
4 IAA/inhibitor B Treated 0.85 >More info 0.82 >More info IAA Treated Original data GEO bulk
5 (Col-0)+200 uM As 0.78 >More info 0.77 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
6 WT+H2O2 0.77 >More info 0.77 >More info WT H2O2 Original data GEO bulk
7 Phytoprostane A1 4 h 0.77 >More info 0.75 >More info Col-0 Original data GEO bulk
8 plant (tga2-5-6) 4h phytoprostane A1 0.75 >More info 0.77 >More info plant (tga2-5-6) 4h control Original data GEO bulk
9 5-Triiodobenzoic acid3 h 0.80 >More info 0.72 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
10 WT 30μM arsenate 8 hours. 0.78 >More info 0.73 >More info WT control (not supplemented). Original data
11 (Col-0)+100 uM As 0.76 >More info 0.74 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
12 PNO8 3 h 0.66 >More info 0.83 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
13 WT seedlings MV 0.77 >More info 0.70 >More info WT seedlings control Seedlings Original data GEO bulk
14 TNT-seedlings 0.72 >More info 0.74 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
15 flu 0.75 >More info 0.68 >More info WT Col Original data GEO bulk
16 Col-0 low oxygen 0.77 >More info 0.65 >More info Col-0 control low oxygen root Original data GEO bulk
17 NJ15 0.64 >More info 0.77 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
18 Anoxia 0.72 >More info 0.69 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
19 plant (Col-0) 4h phytoprostane A1 0.70 >More info 0.71 >More info plant (tga2-5-6) 4h control Original data GEO bulk
20 Fenclorim 4hr 0.74 >More info 0.65 >More info Acetone 4hr root Original data GEO bulk
21 Selenate (root) 0.68 >More info 0.70 >More info Ws (root) Original data GEO bulk
22 Heat and anoxia 0.69 >More info 0.69 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
23 Root Selenate 0.68 >More info 0.70 >More info Root control 40 micromolar selenate Root Original data GEO bulk
24 CMP 4hr 0.76 >More info 0.61 >More info Acetone 4hr root Original data GEO bulk
25 (Ws-2)+100 uM As 0.72 >More info 0.64 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
26 gun1gun5 far-red pretreated -0.69 >More info -0.66 >More info WT far-red pretreated Original data GEO bulk
27 WT-Dry 0.56 >More info 0.78 >More info WT-CK dehydration treatment 1h Original data
28 root Dosed gold 0.77 >More info 0.57 >More info root No gold .125 mM gold 24 h roots Original data
29 WT 3h -P 0.63 >More info 0.71 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
30 0.125 mM gold 24 h 0.77 >More info 0.57 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
31 flu over-tAPX 0.73 >More info 0.61 >More info WT Col Original data GEO bulk
32 AgNO3 3 h 0.70 >More info 0.63 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
33 chito-tetramer 0.65 >More info 0.67 >More info Col Mock Original data GEO bulk
34 R. solani AG8 0.73 >More info 0.59 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
35 chito-octamer 0.61 >More info 0.70 >More info Col Mock Original data GEO bulk
36 Col-0 37C 0.65 >More info 0.66 >More info Col-0 22C Original data GEO bulk
37 anac017-2 AntimycinA 3h -0.73 >More info -0.58 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
38 Hydrogen Peroxide 500 uM 0.63 >More info 0.68 >More info Control RB and PER Hydrogen Peroxide Original data
39 Salt Stress 24 h (root) 0.76 >More info 0.54 >More info Stress mock 24 h (root) Original data Stress treatments
40 Seedling KUA1-IOX est 0.64 >More info 0.65 >More info Seedling KUA1-IOX mock Original data
41 Ws HS 0.57 >More info 0.72 >More info Ws control heat shocked seedling Original data GEO bulk
42 9 hr Hypoxia 1 hr recovery Total RNA 0.76 >More info 0.53 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
43 root protoplasts 40 mM NaCl 0.60 >More info 0.68 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
44 9 hr Hypoxia 1 hr recovery IP RNA 0.76 >More info 0.52 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
45 oligomycin 1 h 0.57 >More info 0.71 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
46 WT flg22 2h 0.68 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
47 WT AntimycinA 3h 0.68 >More info 0.59 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
48 oligomycin 4 h 0.68 >More info 0.58 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
49 bak1-3 +Pep2 10h 0.70 >More info 0.56 >More info WT +Pep2 10h Pep2 Original data GEO bulk
50 rosette Light Wounded 0.62 >More info 0.64 >More info rosette Light Control Original data GEO bulk
51 WT+chitooctaose 0.51 >More info 0.75 >More info WT+water chitooctaose seedlings Original data GEO bulk
52 Cocultivation 8 hrs root 0.70 >More info 0.56 >More info Mock cocultivation 8 hrs root Root Original data
53 6-trichlorophenoxyacetic acid 3 h 0.57 >More info 0.69 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
54 35S::PI ap3-3 35S::AP-GR +DEX 0.53 >More info 0.72 >More info 0hr DEX Original data GEO bulk
55 WT H2O2 3h 0.65 >More info 0.60 >More info WT water 3h 3h_H2O2 Original data GEO bulk
56 gai Control 0.76 >More info 0.49 >More info Laer Control leaf discs Original data GEO bulk
57 1h +Pi -0.62 >More info -0.63 >More info 1h -Pi root Original data GEO bulk
58 safener treated 0.71 >More info 0.54 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
59 cat2-short-day 2d 0.56 >More info 0.68 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
60 Rose Bengal 0.5 uM 0.52 >More info 0.72 >More info Control RB and PER Rose Bengal Original data
61 cat2-2; 8h switch to ambient CO2 concentrations; 0.54 >More info 0.70 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
62 cell culture 4 h phytoprostane A1 0.64 >More info 0.60 >More info cell culture 4 h control Original data GEO bulk
63 Whole root - S 3H 0.53 >More info 0.71 >More info Whole root - S 0H Original data GEO bulk
64 Col-Luc WT 3h antimycin A 0.63 >More info 0.61 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
65 rosette Dark Wounded 0.59 >More info 0.64 >More info rosette Dark Control Original data GEO bulk
66 Col-0 HS 0.54 >More info 0.69 >More info Col-0 control heat shocked seedling Original data GEO bulk
67 WT (Col-0) heat shock 0.54 >More info 0.69 >More info WT (Col-0) whole seedling Original data GEO bulk
68 Heat 0.58 >More info 0.65 >More info Control 90 minutes at 38°C. Original data GEO bulk
69 IMI 4mM 0.72 >More info 0.51 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
70 dicamba 0.67 >More info 0.55 >More info WT mock whole seedling Original data GEO bulk
71 Fenclorim 24hr 0.70 >More info 0.52 >More info Acetone 24hr root Original data GEO bulk
72 P.p 2.5hai 0.61 >More info 0.61 >More info At-Control roots Original data GEO bulk
73 DFPM 0.72 >More info 0.49 >More info control Original data GEO bulk
74 Col ozone 3h 0.56 >More info 0.65 >More info Col clean-air 3h ozone Original data GEO bulk
75 Seedling-HeatStressed TOTALmRNA 0.53 >More info 0.68 >More info Seedling-control TOTALmRNA seedling Original data
76 Roots Cd -0.69 >More info -0.51 >More info Roots control Cd Root Original data GEO bulk
77 SA 0.73 >More info 0.47 >More info WT mock Whole seedling Original data GEO bulk
78 Seedling-HeatStressed POLYSOMESmRNA 0.50 >More info 0.69 >More info Seedling-control POLYSOMESmRNA seedling Original data
79 Col0-PsmES4326-24hpi 0.58 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
80 whole roots 140 mM NaCl 1 hour 0.55 >More info 0.63 >More info whole roots standard Original data GEO bulk
81 root stele 40 mM NaCls 0.64 >More info 0.54 >More info root stele Original data GEO bulk
82 P.p 6hai 0.71 >More info 0.47 >More info At-Control roots Original data GEO bulk
83 P.p 30hai 0.67 >More info 0.50 >More info At-Control roots Original data GEO bulk
84 Dark 40min pls UV-AB 5min 0.60 >More info 0.56 >More info Dark 45 min Original data Light treatments
85 CMP 24hr 0.66 >More info 0.50 >More info Acetone 24hr root Original data GEO bulk
86 6h +Pi -0.60 >More info -0.56 >More info 6h -Pi root Original data GEO bulk
87 9 hr Hypoxia IP RNA 0.74 >More info 0.42 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
88 Protoplast Induced 0.46 >More info 0.70 >More info Uninduced Original data GEO bulk
89 Shoot -Cs 0.43 >More info 0.73 >More info Control-shoot Original data GEO bulk
90 toc1-1-85hr 0.50 >More info 0.65 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
91 anac017-2 water 3h 0.49 >More info 0.66 >More info WT water 3h 3h_water Original data GEO bulk
92 Col-0 under 4 days salt 0.63 >More info 0.51 >More info Col-0 under control 4 days salt treatment rosette Original data
93 downy mildew cotyledons late stage 0.59 >More info 0.55 >More info mock inoculated Cotyledons Original data GEO bulk
94 Col-0 flu HL 3h 0.67 >More info 0.47 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
95 Cycloheximide 3 h 0.55 >More info 0.59 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
96 coi1-2 0.62 >More info 0.51 >More info Col-0 mock Whole seedling Original data GEO bulk
97 hira-root -0.61 >More info -0.52 >More info WT-root root Original data
98 dark-hs 0.47 >More info 0.66 >More info dark-control seedling Original data
99 whole roots 140 mM NaCl 30 minutes 0.53 >More info 0.59 >More info whole roots standard Original data GEO bulk
100 WT flg22 1h 0.56 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
101 UV 0.59 >More info 0.53 >More info WT aerial region Original data GEO bulk
102 sid2-2 9 hpi A. brassicicola 0.62 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
103 Ibuprofen 3 h 0.46 >More info 0.66 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
104 Laer treat paclobutrazol (PAC) 0.67 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
105 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.64 >More info 0.47 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
106 Nicotinamide-61hr 0.53 >More info 0.58 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
107 WT NAA/flg 1h 0.62 >More info 0.49 >More info WT 0h Leaf tissue Original data GEO bulk
108 toc1-1-65hr 0.56 >More info 0.54 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
109 seedlings-week-old RECA1-overexpressing
transgenic		 0.54 >More info 0.56 >More info seedlings-week-old Col-0 seedlings Original data
110 atgsnor1-3-avrB-6h 0.61 >More info 0.49 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
111 ex2 flu dark 8hours/30 minute light 0.36 >More info 0.74 >More info col dark 8hours/30 minute light Original data GEO bulk
112 Col-0 ozone 0.64 >More info 0.45 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
113 shoots bhlh100/101 0uM Fe 0.71 >More info 0.38 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
114 pepr1-1 Pepr2-3 +Pep2 2h -0.61 >More info -0.48 >More info WT +Pep2 2h Pep2 Original data GEO bulk
115 ABA DFPM 0.62 >More info 0.47 >More info control Original data GEO bulk
116 35S:RPS4 eds1-2 8h -0.62 >More info -0.47 >More info 35S:RPS4 8h leaves Original data
117 WT Col-0 Bgh inoculated 0.60 >More info 0.49 >More info WT Col-0 Un-inoculated Original data GEO bulk
118 Sulfometuron EC50 0.61 >More info 0.48 >More info Carrier Original data GEO bulk
119 WT chitooctaose 0.48 >More info 0.61 >More info WT water Original data GEO bulk
120 npr1-1 SA -0.69 >More info -0.39 >More info Col-0 SA complete seedling Original data
121 aba1 hypocotyl 0.52 >More info 0.56 >More info Ler hypocotyl hypocotyl Original data GEO bulk
122 rao2 H2O2 3h -0.55 >More info -0.53 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
123 rdr6-15 -0.54 >More info -0.54 >More info Col-0 Original data GEO bulk
124 Osmotic Stress 24 h (root) 0.64 >More info 0.44 >More info Stress mock 24 h (root) Original data Stress treatments
125 C24 ozone 0.63 >More info 0.44 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
126 ANAC102 knock-out low oxygen -0.43 >More info -0.64 >More info Col-0 low oxygen Original data GEO bulk
127 pXVE:HA-EDM2-a untreated -0.44 >More info -0.63 >More info Col-0 untreated seedlings Original data GEO bulk
128 Col-0 2HS 0.58 >More info 0.49 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
129 ein2-1 9 hpi A. brassicicola 0.58 >More info 0.48 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
130 9 hr Hypoxia Total RNA 0.72 >More info 0.34 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
131 WT 90-105 min Xanthomonas 0.52 >More info 0.54 >More info WT T0 Original data GEO bulk
132 csn5 (csn5a-2 csn5b) light 0.61 >More info 0.45 >More info WT light Original data GEO bulk
133 Cor 10h 0.56 >More info 0.50 >More info Mock 10h Cor Original data GEO bulk
134 B.cinerea 18 h infection 0.64 >More info 0.42 >More info Mock 18 h Original data Botrytis cinerea infection
135 Botrytis cinerea 18h 0.64 >More info 0.42 >More info control 18h Original data GEO bulk
136 8hr-pH4.5 0.53 >More info 0.52 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
137 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.66 >More info 0.39 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
138 35S:RPS4 eds1-2 2h -0.38 >More info -0.67 >More info 35S:RPS4 2h leaves Original data
139 Nicotinamide-81hr 0.53 >More info 0.51 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
140 root endodermis and quiescent center 40 mM NaCl 0.56 >More info 0.48 >More info root endodermis and quiescent center Original data GEO bulk
141 ARR22-ox (t-zeatin 3 h) 0.54 >More info 0.50 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
142 Blue Light 4 h 0.45 >More info 0.59 >More info White Light 4 h Original data Light treatments
143 Light 0.46 >More info 0.58 >More info Control Original data GEO bulk
144 ahg1-1 0.38 >More info 0.66 >More info ABA control Original data GEO bulk
145 Nicotinamide-85hr 0.52 >More info 0.51 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
146 AvrRpt2 Col-0 6hpi 0.63 >More info 0.40 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
147 P.p 10.5hai 0.60 >More info 0.43 >More info At-Control roots Original data GEO bulk
148 Col-0 9 hpi A. brassicicola 0.62 >More info 0.41 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
149 WT Red light 1h 0.56 >More info 0.47 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
150 AtGATA2ox 0.71 >More info 0.32 >More info Col seedling Original data GEO bulk
151 WT 2-4h Xanthomonas 0.63 >More info 0.39 >More info WT T0 Original data GEO bulk
152 root protophloem 40 mM NaCl 0.55 >More info 0.47 >More info root protophloem Original data GEO bulk
153 Wounding Stress3 h (shoot) 0.53 >More info 0.49 >More info Stress mock 3 h (shoot) Original data Stress treatments
154 ataf1-1 mutant Col-0 Bgh inoculated 0.57 >More info 0.45 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
155 Nicotinamide-57hr 0.59 >More info 0.43 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
156 Mutant arf19-1 (IAA) -0.41 >More info -0.61 >More info Col (IAA) Original data GEO bulk
157 flu dark 8hours/30 minute light 0.29 >More info 0.73 >More info col dark 8hours/30 minute light Original data GEO bulk
158 Heat shock optimum 0.37 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
159 cop1 Seedling BL+ABA 0.41 >More info 0.61 >More info WT Seedling BL+ABA Original data GEO bulk
160 FLIGHT TAGESB plate6 ROOTS 0.49 >More info 0.53 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
161 pepr1-1 Pepr2-3 +Pep2 10h -0.54 >More info -0.47 >More info WT +Pep2 10h Pep2 Original data GEO bulk
162 Te ozone 0.63 >More info 0.38 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
163 WT roots - Fe 0.61 >More info 0.40 >More info WT roots + Fe Roots Original data GEO bulk
164 Kas-1 -Fe 24h -0.40 >More info -0.61 >More info Kas-1 +Fe 24h roots Original data GEO bulk
165 Kas -Fe 24h Roots -0.40 >More info -0.61 >More info Kas +Fe 24h Roots Original data GEO bulk
166 AmGSTF1 expressor -0.47 >More info -0.54 >More info WT leaf tissue Original data GEO bulk
167 Leaf wounded 0.33 >More info 0.68 >More info Leaf control vegetative leaf Original data GEO bulk
168 SCR-GR Time 12H Dex 0.62 >More info 0.38 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
169 root hypoxia total 0.62 >More info 0.38 >More info root control total Original data GEO bulk
170 SA 4mM 0.58 >More info 0.42 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
171 -Sulfate 24 h 0.34 >More info 0.66 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
172 sid2-avrB-6h 0.45 >More info 0.55 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
173 Light 0.5h polysome-bound 0.46 >More info 0.54 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
174 GO5; 8h switch to ambient CO2 concentrations; 0.40 >More info 0.60 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
175 Laer Flg22 1h 0.56 >More info 0.43 >More info Laer Control leaf discs Original data GEO bulk
176 arf2 mock 0.53 >More info 0.46 >More info Col mock Original data GEO bulk
177 2 hr Hypoxia Total RNA 0.63 >More info 0.36 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
178 Mutant arf2 (etiol) 0.53 >More info 0.46 >More info Col (etiol) Original data GEO bulk
179 sicy-192 gun1-101 cotyledons 0.55 >More info 0.44 >More info WT cotyledons cotyledons Original data
180 MG132 3 h 0.41 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
181 miR393 flg22 1h 0.46 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
182 Cd 18h root 0.37 >More info 0.62 >More info WT-Untreated Root Original data GEO bulk
183 toc1-1-89hr 0.28 >More info 0.71 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
184 pip3 At2g19270 RNAi 24 0.34 >More info 0.65 >More info Nd-1 whole plant Original data GEO bulk
185 GA 0.44 >More info 0.55 >More info none GA Rosette Original data GEO bulk
186 TaFLS overexpression line (OE2) -0.45 >More info -0.54 >More info Col-0 Rosette leaves Original data
187 GST NPP1 4 h (leaf) 0.60 >More info 0.38 >More info Mock 4 h (leaf) Original data Elicitor treatments
188 Col upon hypoxia 6 hrs 0.59 >More info 0.39 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
189 R. solani AG2-1 0.54 >More info 0.44 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
190 Whole root - low pH 12H 0.53 >More info 0.45 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
191 Cold Stress 24 h (root) 0.60 >More info 0.38 >More info Stress mock 24 h (root) Original data Stress treatments
192 P.syringae AvrRpt2 4 h (leaf) 0.47 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
193 upf1 0.40 >More info 0.58 >More info WT whole plant Original data GEO bulk
194 9m.KCl 0.45 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
195 embryo paclobutrazol 0.56 >More info 0.41 >More info embryo-control paclobutrazol embryo Original data GEO bulk
196 JA 0.54 >More info 0.43 >More info Col-0 mock Whole seedling Original data GEO bulk
197 cop1 Seedling BL 0.53 >More info 0.44 >More info WT Seedling BL Original data GEO bulk
198 pip3 At2g19270 RNAi 32 0.35 >More info 0.62 >More info Nd-1 whole plant Original data GEO bulk
199 2 hr Hypoxia IP RNA 0.62 >More info 0.34 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
200 CT101 ozone 0.64 >More info 0.32 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
201 bbx24 in Simulated Shade -0.69 >More info -0.27 >More info WT in simulated shade shade seedling Original data
202 plant (Col-0) 4h OPDA 0.64 >More info 0.32 >More info plant (Col-0) 4h control Original data GEO bulk
203 vte2-1 3d vernalization 0.59 >More info 0.37 >More info WT 3d vernalization Original data GEO bulk
204 protoplasted roots pH4.6 0.50 >More info 0.46 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
205 OPDA 4 h 0.64 >More info 0.32 >More info Col-0 Original data GEO bulk
206 coi1-16 ein2 sid2 ctrl -0.62 >More info -0.34 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
207 Laer pretreat GA Flg22 1h 0.25 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
208 AFB1 flg22 1h 0.43 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
209 1hr-pH4.5 0.46 >More info 0.50 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
210 AvrRpm1 2 h (leaf) 0.62 >More info 0.33 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
211 coi1-16 ein2 sid2 ozone 0.62 >More info 0.33 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
212 SCR-GR Time 3H Dex 0.52 >More info 0.43 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
213 Phaseolicola 2 h (leaf) 0.58 >More info 0.36 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
214 seedlings +5AC 0.59 >More info 0.35 >More info control seedlings 10-day old whole seedling Original data GEO bulk
215 seedling 24h after Gamma WT 0.53 >More info 0.41 >More info seedling day 2 unirradiated WT 24h Original data
216 root cells endodermis and quiescent center -Fe 0.50 >More info 0.44 >More info whole roots standard Original data GEO bulk
217 CeO2 germinant -0.43 >More info -0.51 >More info Millipore Water germinant CeO2 seedling Original data
218 Laer pretreat GA+JA Flg22 0h 0.67 >More info 0.26 >More info Laer pretreat water control leaf discs Original data GEO bulk
219 WT-NOCO2 INFECTED 0.53 >More info 0.40 >More info WT-MOCK Original data GEO bulk
220 roottip hypoxia total 0.56 >More info 0.37 >More info roottip control total Original data GEO bulk
221 plant (tga2-5-6) 4h OPDA 0.57 >More info 0.36 >More info plant (tga2-5-6) 4h control Original data GEO bulk
222 Botrytis cinerea 48h 0.61 >More info 0.32 >More info control 48h Original data GEO bulk
223 HopZ1a treated 0.51 >More info 0.42 >More info col Original data GEO bulk
224 abi1 hypocotyl 0.31 >More info 0.62 >More info Ler hypocotyl hypocotyl Original data GEO bulk
225 dorn1-1 Root 100 mM ATP 30 min -0.30 >More info -0.63 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
226 bak1-3 +Pep2 2h 0.37 >More info 0.55 >More info WT +Pep2 2h Pep2 Original data GEO bulk
227 AtLysM RLK1 mutant chitooctaose -0.39 >More info -0.53 >More info WT chitooctaose Original data GEO bulk
228 Mutant siz1-3 (Drought) 0.58 >More info 0.34 >More info Col-0 (Drought) Original data GEO bulk
229 root cells columella root cap -Fe 0.59 >More info 0.33 >More info whole roots standard Original data GEO bulk
230 siz1-3 drought 0.58 >More info 0.34 >More info Col-0 drought Original data GEO bulk
231 seedlings protease IV 0.42 >More info 0.50 >More info seedlings nontreated control whole seedling Original data
232 irradiated leaf (cmt 5d) 0.54 >More info 0.37 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
233 cys-c1 root -0.53 >More info -0.38 >More info Root-WT roots Original data GEO bulk
234 Col-0 2h NAA 0.54 >More info 0.37 >More info Col-0 6h MOCK Original data GEO bulk
235 ani1 T16 -0.53 >More info -0.38 >More info WT T16 root tissue Original data GEO bulk
236 Triazolopyrimidine EC50 0.52 >More info 0.39 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
237 FHY3p dark+DEX -0.57 >More info -0.34 >More info FHY3p dark+mock Original data GEO bulk
238 FarRed Light 4 h 0.34 >More info 0.57 >More info White Light 4 h Original data Light treatments
239 npr1 sni1 ssn2 SA -0.32 >More info -0.59 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
240 Leafminer damaged seedlings 0.34 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
241 msh1 albino 0.63 >More info 0.27 >More info WT aerial part Original data GEO bulk
242 HopZ1a treated ulp1c ulp1d 0.51 >More info 0.39 >More info col Original data GEO bulk
243 WT-SA 0.53 >More info 0.37 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
244 PsJN -0.27 >More info -0.63 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
245 col-5 DC3000-avrRpm 4h 0.58 >More info 0.32 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
246 dde2-2 9 hpi A. brassicicola 0.55 >More info 0.34 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
247 COL-0-Fe--root 0.55 >More info 0.34 >More info COL-0-Ctrl--root root Original data
248 Col-0 DCA 48h 0.53 >More info 0.36 >More info Col-0 MOCK 48h Original data GEO bulk
249 arf2 brz -0.52 >More info -0.37 >More info arf2 mock Original data GEO bulk
250 Laer Flg22(Agrobacterium) 2h -0.36 >More info -0.53 >More info Laer Control leaf discs Original data GEO bulk
251 wnk8-2 untreated -0.37 >More info -0.52 >More info Col-0 untreated seedlings Original data GEO bulk
252 root longitudinal zone-4 NaCl 0.38 >More info 0.51 >More info root longitudinal zone-4 Original data GEO bulk
253 rgs1+no sugars -0.32 >More info -0.57 >More info WT+no sugars rosette leaves Original data GEO bulk
254 Col0 roots 2hr KNO3 nitrogen -0.32 >More info -0.57 >More info Col0 roots 2hr KCl control root Original data GEO bulk
255 Col in Pi deficiency medium 0.33 >More info 0.55 >More info Col in control medium root Original data GEO bulk
256 wnk8-1 untreated -0.32 >More info -0.56 >More info Col-0 untreated seedlings Original data GEO bulk
257 root columella root cap 40 mM NaCl 0.52 >More info 0.36 >More info root columella root cap Original data GEO bulk
258 8-DAC chr11-1chr17-1 0.52 >More info 0.36 >More info 8-DAC Col-0 leaf explants Original data
259 til1-1 22C 0.38 >More info 0.50 >More info Col-0 22C Original data GEO bulk
260 PBZ 0.26 >More info 0.62 >More info none PBZ Rosette Original data GEO bulk
261 ein2-1 24hpi A. brassicicola 0.24 >More info 0.64 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
262 WT Bc inoculation 14h 0.56 >More info 0.31 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
263 FarRed Light 45min -0.19 >More info -0.68 >More info White Light 45min Original data Light treatments
264 60m light 0.27 >More info 0.60 >More info before light whole seedlings Original data GEO bulk
265 Col-0-1h IAA 0.50 >More info 0.36 >More info Col-0-0h IAA whole plant Original data GEO bulk
266 embryo ABA 0.51 >More info 0.35 >More info embryo-control ABA embryo Original data GEO bulk
267 WT Shoot Hypoxia 0.50 >More info 0.36 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
268 cat2-short-day 4d 0.36 >More info 0.50 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
269 seedling -S Exp 0.28 >More info 0.58 >More info seedling FN Exp seedling Original data
270 E.coli TUV86 2 fliC 7h 0.55 >More info 0.30 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
271 root cells cortex 140mM NaCl 8 hours 0.53 >More info 0.32 >More info root cells cortex standard 1 hour root cells cortex Original data
272 root cells cortex 140mM NaCl 20 hours 0.54 >More info 0.31 >More info root cells cortex standard 1 hour root cells cortex Original data
273 toc1-1-57hr 0.51 >More info 0.34 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
274 Col BTH 0.18 >More info 0.67 >More info Col rosettes Original data GEO bulk
275 Col-0 SA 0.60 >More info 0.25 >More info Col-0 Original data GEO bulk
276 DC3000 2 h (leaf) 0.56 >More info 0.28 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
277 root cells cortex 140mM NaCl 3 hours 0.55 >More info 0.29 >More info root cells cortex standard 1 hour root cells cortex Original data
278 hrpA 7h 0.56 >More info 0.28 >More info Mock 7h hrpA Original data GEO bulk
279 Red/FR Light 4 h -0.29 >More info -0.55 >More info FarRed Light 4 h Original data Light treatments
280 des1 water 0.33 >More info 0.51 >More info WT water water leaf Original data GEO bulk
281 wrky33 Bc inoculation 14h 0.61 >More info 0.23 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
282 shoots WT 0uM Fe 0.57 >More info 0.27 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
283 root cells endodermis 140mM NaCl 3 hours 0.50 >More info 0.33 >More info root cells endodermis standard 1 hour root cells endodermis Original data
284 Nicotinamide-53hr 0.50 >More info 0.33 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
285 shoot-10 μM DEX- 6 hr 0.54 >More info 0.29 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
286 Col-0-avrB-6h 0.53 >More info 0.30 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
287 OXUPB1-2 elongation zone 0.30 >More info 0.53 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
288 max4 hypocotyl 0.33 >More info 0.50 >More info wt hypocotyl hypocotyl Original data GEO bulk
289 MIL4 ox -0.27 >More info -0.56 >More info Col Original data GEO bulk
290 seedling 1.5h after Gamma WT 0.60 >More info 0.23 >More info seedling day 1 unirradiated WT 1.5h Original data
291 bri1-116 0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
292 4C 1h 0.21 >More info 0.62 >More info 4C 0h Original data GEO bulk
293 dde2-2 24hpi A. brassicicola 0.14 >More info 0.69 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
294 GA4 3 h (ga1 seed) 0.52 >More info 0.30 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
295 root - 01% oxygen - 48h 0.30 >More info 0.52 >More info root - 21% oxygen - 48h Original data GEO bulk
296 hrpA fliC 7h 0.59 >More info 0.23 >More info Mock 7h hrpA fliC Original data GEO bulk
297 Laer Flg22+GA 2h 0.55 >More info 0.26 >More info Laer Control leaf discs Original data GEO bulk
298 NFA8 roots 2hr KNO3 nitrogen 0.52 >More info 0.29 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
299 HS 0.26 >More info 0.55 >More info noneHS Original data GEO bulk
300 mp-B4149 mutant IAA 0.50 >More info 0.30 >More info GR-bdl IAA Original data GEO bulk
301 edm2-2 untreated -0.28 >More info -0.52 >More info Col-0 untreated seedlings Original data GEO bulk
302 siliques AtHb1 control 0.28 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
303 Mutant arf19-1 -0.21 >More info -0.59 >More info Col Original data GEO bulk
304 WT 3H Cold 0.21 >More info 0.59 >More info WT control Original data GEO bulk
305 Laer pretreat JA Flg22 1h 0.50 >More info 0.29 >More info Laer pretreat water control leaf discs Original data GEO bulk
306 SLWF infested 0.56 >More info 0.23 >More info SLWF uninfested rosette tissue Original data GEO bulk
307 sid2-2 24hpi A. brassicicola 0.17 >More info 0.62 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
308 CLO 4mM 0.62 >More info 0.15 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
309 WT NAA 2h -0.23 >More info -0.54 >More info WT 0h Leaf tissue Original data GEO bulk
310 sng1 0.20 >More info 0.57 >More info WT aerial region Original data GEO bulk
311 amiR-tor induced 3d 0.27 >More info 0.50 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
312 desiccated mature pollen grains -0.17 >More info -0.60 >More info hydrated pollen grains Original data GEO bulk
313 RRE2 Chitin 0.53 >More info 0.23 >More info Chitin Original data GEO bulk
314 ckh1 CK0 0.52 >More info 0.24 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
315 rcf1-1 cold 24h 0.55 >More info 0.21 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
316 Col-0 C2H4 24h 0.50 >More info 0.26 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
317 GST 4 h (leaf) 0.56 >More info 0.20 >More info Mock 4 h (leaf) Original data Elicitor treatments
318 vte2 leaves 48h LT 0.53 >More info 0.23 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
319 Red/FR Light45min -0.03 >More info 0.79 >More info FarRed Light 45min Original data Light treatments
320 hrcC 0.50 >More info 0.25 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
321 Lipopolysaccaride4 h (leaf) 0.55 >More info 0.20 >More info Mock 4 h (leaf) Original data Elicitor treatments
322 root cells cortex 140mM NaCl 48 hours 0.53 >More info 0.21 >More info root cells cortex standard 1 hour root cells cortex Original data
323 MPK6 ox Shoot Hypoxia 0.53 >More info 0.21 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
324 long 12-degree- 0.23 >More info 0.51 >More info control long Original data GEO bulk
325 20h Col-0 -0.03 >More info -0.71 >More info 00h Col-0 Original data GEO bulk
326 Laer pretreat GA+JA Flg22 1h 0.59 >More info 0.14 >More info Laer pretreat water control leaf discs Original data GEO bulk
327 Flagellin 4 h (leaf) 0.51 >More info 0.22 >More info Mock 4 h (leaf) Original data Elicitor treatments
328 seedling 12h after Gamma WT -0.13 >More info -0.60 >More info seedling day 1 unirradiated WT 12h Original data
329 agb1 gpa1 -ABA GC -0.21 >More info -0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
330 UV Stress 24 h (shoot) 0.53 >More info 0.18 >More info Stress mock 24 h (shoot) Original data Stress treatments
331 AFB1 0h 0.50 >More info 0.21 >More info WT 0h Leaf tissue Original data GEO bulk
332 HARAP aerobic -0.18 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
333 Laer Flg22 2h 0.54 >More info 0.16 >More info Laer Control leaf discs Original data GEO bulk
334 Blue Light 45 min -0.12 >More info -0.56 >More info White Light 45min Original data Light treatments
335 sps1 -0.57 >More info -0.11 >More info WT seedling Original data GEO bulk
336 penta Alternaria 3dpi 0.50 >More info 0.18 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
337 etiolated atbzip16 0.52 >More info 0.15 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
338 Cs shoot -0.13 >More info -0.54 >More info control shoot Original data GEO bulk
339 ein3 eil1 0.61 >More info 0.06 >More info Col-0 mock Whole seedling Original data GEO bulk
340 Atwrky63 -0.51 >More info -0.15 >More info Col0 none leaf Original data GEO bulk
341 opr3 OPDA 0.5 h 0.12 >More info 0.54 >More info opr3 0 h Original data GEO bulk
342 penta MeJA 1h 0.59 >More info 0.07 >More info Laer MeJA 1h leaf discs Original data GEO bulk
343 IAA7mII over-expressor IAA Treated -0.03 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
344 16h Col-0 0.02 >More info -0.66 >More info 00h Col-0 Original data GEO bulk
345 08h Col-0 -0.06 >More info -0.58 >More info 00h Col-0 Original data GEO bulk
346 Laer pretreat GA Flg22 0h 0.51 >More info 0.11 >More info Laer pretreat water control leaf discs Original data GEO bulk
347 Col-0 24hpi A. brassicicola 0.59 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
348 SA Treated 0.53 >More info 0.08 >More info Water Original data GEO bulk
349 HairpinZ 4 h (leaf) 0.63 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
350 Red Light 4 h -0.06 >More info -0.53 >More info White Light 4 h Original data Light treatments
351 seed germinating in countinuous light 24h SL -0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
352 CDB1-Knockout -0.05 >More info -0.54 >More info WT Original data GEO bulk
353 long 17-degree- 0.09 >More info 0.50 >More info control long Original data GEO bulk
354 shoot hypoxia p35S -0.02 >More info -0.56 >More info shoot hypoxia total Original data GEO bulk
355 35S::HRE2 Hypoxic -0.06 >More info -0.52 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
356 30m light 0.06 >More info 0.52 >More info before light whole seedlings Original data GEO bulk
357 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
358 Mutant lwd1_lwd2 0.02 >More info -0.56 >More info Wildtype for phy mutants Original data GEO bulk
359 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.02 >More info -0.56 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
360 Octopus mutant DYG25 0.02 >More info 0.51 >More info WS Original data GEO bulk
361 shoot control p35S -0.02 >More info -0.50 >More info shoot control total Original data GEO bulk
362 xyl-grown cell culture- 1h 1mM Suc 0.08 >More info -0.60 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
363 +1.6 mM Tween 20 1 h. 0.67 >More info -0.16 >More info +distilled water 1 h. Original data GEO bulk
364 Atss3 Light1 -0.04 >More info 0.52 >More info Atss3 Dark0.5 Original data GEO bulk
365 WT 1wk -P 0.52 >More info -0.05 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
366 Shoot apex inflorescence (after bolting) -0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
367 seedling 12h after Gamma atm-1 0.12 >More info -0.59 >More info seedling day 1 unirradiated atm-1 12h Original data
368 root longitudinal zone-3 -Fe -0.08 >More info 0.53 >More info root longitudinal zone-3 standard Original data GEO bulk
369 AtMYB30-ox T0 0.05 >More info -0.50 >More info WT T0 Original data GEO bulk
370 Col PSTDC3000 24h 0.57 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
371 P. infestans 6 h (leaf) 0.55 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
372 seedling 12h after HZE atm-1 0.26 >More info -0.59 >More info seedling day 1 unirradiated atm-1 12h Original data
373 seedling 6h after HZE atm-1 0.24 >More info -0.51 >More info seedling day 1 unirradiated atm-1 6h Original data
374 Estradiol4 days -0.25 >More info 0.50 >More info Col Original data GEO bulk
375 estradiol induced LEC1 -0.25 >More info 0.50 >More info control Original data GEO bulk
376 WT NAA 1h 0.57 >More info -0.47 >More info WT 0h Leaf tissue Original data GEO bulk
377 toc1-1-77hr 0.50 >More info -0.51 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk