4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on oas-a1.1 root
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List of experiments correlated with "oas-a1.1 root"  Help Download transcriptome of top 30
Score Experiment Correlation from
oas-a1.1 root		 Correlation to
oas-a1.1 root		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 oas-a1.1 root 1.00 >More info 1.00 >More info WT-Untreated Root Original data GEO bulk
2 Cd 18h root 0.80 >More info 0.62 >More info WT-Untreated Root Original data GEO bulk
3 Whole root - S 3H 0.77 >More info 0.65 >More info Whole root - S 0H Original data GEO bulk
4 Whole root - S 12H 0.79 >More info 0.56 >More info Whole root - S 0H Original data GEO bulk
5 Root submergence 7h -0.76 >More info -0.55 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
6 root - 01% oxygen - 2h -0.62 >More info -0.67 >More info root - 21% oxygen - 2h Original data GEO bulk
7 1 h Light Total RNA 0.73 >More info 0.54 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
8 Root dark control 7h -0.77 >More info -0.48 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
9 Shoot dark control 7h -0.68 >More info -0.55 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
10 FarRed Light 45min -0.52 >More info -0.71 >More info White Light 45min Original data Light treatments
11 Day Time Treatment 0.65 >More info 0.57 >More info Day Time Control 1hr white light pulse aerial rosette Original data
12 ANOXIA -0.59 >More info -0.62 >More info ANOXIA+SUCROSE Original data GEO bulk
13 Dark 4 h pls UV-AB 5min 0.70 >More info 0.50 >More info Dark 4 h Original data Light treatments
14 estradiole-induced ANAC059 0.51 >More info 0.68 >More info transgenic (empty vector inducible system) Original data GEO bulk
15 amiR-tor induced 3d 0.71 >More info 0.48 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
16 Shoot submergence 24h -0.67 >More info -0.51 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
17 Root submergence 24h -0.74 >More info -0.44 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
18 Shoot dark control 24h -0.66 >More info -0.51 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
19 Whole root - S 24H 0.73 >More info 0.44 >More info Whole root - S 0H Original data GEO bulk
20 Pseudomonas -0.62 >More info -0.55 >More info Control pseudomonas treated whole seedling Original data GEO bulk
21 COL-0-Fe--shoot 0.74 >More info 0.43 >More info COL-0-Ctrl--shoot shoot Original data
22 WT (Col) glucose 0.76 >More info 0.40 >More info WT (Col) glucose seedlings Original data GEO bulk
23 Root dark control 24h -0.76 >More info -0.40 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
24 phyB mutant 16C 4hrs -0.61 >More info -0.55 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
25 Night Time Treatment 0.57 >More info 0.59 >More info Night Time Control 1hr white light pulse aerial rosette Original data
26 1 h Light IP RNA 0.74 >More info 0.41 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
27 seedling 1.5h after HZE atm-1 -0.69 >More info -0.46 >More info seedling day 1 unirradiated atm-1 1.5h Original data
28 1.5 hr ammonium -0.69 >More info -0.45 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
29 RGA-GR-DEX -0.55 >More info -0.58 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
30 M6PR transgenic leaf 0mM NaCl -0.70 >More info -0.43 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
31 WT (Col-0) inflorescence drought day 4 -0.63 >More info -0.49 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
32 seedling 1.5h after HZE WT -0.72 >More info -0.38 >More info seedling day 1 unirradiated WT 1.5h Original data
33 Ibuprofen 3 h 0.60 >More info 0.49 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
34 vte1-1 3d vernalization 0.69 >More info 0.39 >More info WT 3d vernalization Original data GEO bulk
35 Col(gl) 0mM NaCl -0.66 >More info -0.42 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
36 6h volatiles Sm. R3089 -0.74 >More info -0.34 >More info 6h untreated whole seedling Original data GEO bulk
37 Col(gl) leaf 0mM NaCl -0.66 >More info -0.42 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
38 elf3-7-23ºC 0.64 >More info 0.44 >More info WT-23ºC Original data GEO bulk
39 3x(p) -0.45 >More info -0.62 >More info 2x two week old seedlings Original data
40 WT Root Hypoxia -0.50 >More info -0.57 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
41 WT hypoxia -0.62 >More info -0.44 >More info WT normoxia whole rosette Original data
42 ga1-3 scl3-1 0.64 >More info 0.41 >More info ga1-3 whole root Original data
43 Transgenic LEC2GR Seedling 1h Dex 0.56 >More info 0.48 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
44 sdg8-2 mutant 0.64 >More info 0.40 >More info wild type leaf Original data GEO bulk
45 Col-0 2HS -0.45 >More info -0.59 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
46 3x(m) -0.39 >More info -0.65 >More info 2x two week old seedlings Original data
47 Light 4h polysome-bound 0.71 >More info 0.32 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
48 ARR22-ox 0.55 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
49 Dark 4 h pls UV-A 5 min 0.60 >More info 0.43 >More info Dark 4 h Original data Light treatments
50 Dark 40min pls UV-AB 5min 0.65 >More info 0.38 >More info Dark 45 min Original data Light treatments
51 penta mutant (higher order mutant) -0.56 >More info -0.47 >More info col control (higher order mutant) Original data GEO bulk
52 Light 4h steady-state 0.70 >More info 0.32 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
53 ERF115OE roottip5days -0.71 >More info -0.31 >More info Col-0 roottip5days root tips Original data
54 cngc4 -0.49 >More info -0.53 >More info Ws-2 Seedlings Original data GEO bulk
55 max3GR24 (1 uM) 0.54 >More info 0.47 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
56 WT Na2S 0.58 >More info 0.43 >More info WT water Na2S leaf Original data GEO bulk
57 2d dark-grown WT(Col-0)/1 hr red light 0.67 >More info 0.34 >More info 2d dark-grown WT seedling Original data GEO bulk
58 Whole root - S 48H 0.68 >More info 0.33 >More info Whole root - S 0H Original data GEO bulk
59 Dark 6h ivd -0.61 >More info -0.40 >More info 0h ivd Original data
60 low CO2 + dark -0.59 >More info -0.41 >More info normal CO2 + light Original data GEO bulk
61 aba2 1% sucrose 12-day-old -0.46 >More info -0.54 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
62 WT Shoot Hypoxia -0.36 >More info -0.64 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
63 OsRLCK253 expressing 0.57 >More info 0.42 >More info WT seedlings Original data GEO bulk
64 P-chlorophenoxy- isobutyric acid 3 h 0.62 >More info 0.37 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
65 ga1-3 SCL3OE 0.63 >More info 0.36 >More info ga1-3 whole root Original data
66 tmm1-inflorescence-tips 0.40 >More info 0.59 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
67 Dark 1day ivd -0.63 >More info -0.35 >More info 0h ivd Original data
68 Cocultivation 8 hrs leaf -0.64 >More info -0.34 >More info Mock cocultivation 8 hrs leaf Leaf Original data
69 shoot-10 μM DEX- 6 hr -0.66 >More info -0.32 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
70 Blue Light 4 h 0.56 >More info 0.42 >More info White Light 4 h Original data Light treatments
71 Heat no recovery 0.56 >More info 0.41 >More info Mock no recovery seedling Original data GEO bulk
72 sfr6 control 0.69 >More info 0.28 >More info WT control All aerial tissue Original data GEO bulk
73 gai Flg22 2h -0.53 >More info -0.44 >More info Laer Flg22 2h leaf discs Original data GEO bulk
74 leaf blade in D -0.61 >More info -0.36 >More info leaf blade in WL leaf blades Original data GEO bulk
75 ptpks2 0.25 >More info 0.72 >More info Col-WT leaves Original data GEO bulk
76 Red/FR Light 4 h -0.68 >More info -0.28 >More info FarRed Light 4 h Original data Light treatments
77 Dark 1day hml -0.62 >More info -0.34 >More info 0h hml Original data
78 amiR-tor induced 6d 0.54 >More info 0.42 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
79 hog1-7 0.67 >More info 0.28 >More info wt whole seedling Original data GEO bulk
80 mutant-line774 0.67 >More info 0.28 >More info WT-control whole plant Original data GEO bulk
81 IRP1-OE-Ctrl--shoot 0.67 >More info 0.28 >More info COL-0-Ctrl--shoot shoot Original data
82 A2hsfa1-ox in quadruple mutant 0.50 >More info 0.45 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
83 essp4/sdg8-5 mutant 0.60 >More info 0.35 >More info wild type leaf Original data GEO bulk
84 Dark 6h hml -0.60 >More info -0.35 >More info 0h hml Original data
85 control leaf (cmt 5d) 0.42 >More info 0.53 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
86 gpa1 +ABA LF -0.55 >More info -0.39 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
87 Col-0 DEX Shade -0.66 >More info -0.28 >More info Col-0 DEX WL seedlings Original data
88 M6PR transgenic 0mM NaCl -0.59 >More info -0.35 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
89 FarRed Light 4 h 0.63 >More info 0.31 >More info White Light 4 h Original data Light treatments
90 Red Light 4 h -0.50 >More info -0.44 >More info White Light 4 h Original data Light treatments
91 30m light 0.50 >More info 0.44 >More info before light whole seedlings Original data GEO bulk
92 Col-0 C2H4 24h -0.63 >More info -0.31 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
93 mil4 sid2 -0.55 >More info -0.38 >More info Col rosettes Original data GEO bulk
94 Col leaf 100mM NaCl -0.62 >More info -0.31 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
95 Col leaf 100mM NaCl -0.62 >More info -0.31 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
96 Col 100mM NaCl -0.62 >More info -0.31 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
97 flu dark 8hours/30 minute light -0.61 >More info -0.32 >More info col dark 8hours/30 minute light Original data GEO bulk
98 Dark 6h wt -0.60 >More info -0.33 >More info 0h wt Original data
99 Whole root - S 72H 0.67 >More info 0.25 >More info Whole root - S 0H Original data GEO bulk
100 Col-0 DCA 6d -0.51 >More info -0.41 >More info Col-0 MOCK 6d Original data GEO bulk
101 petiole in D -0.62 >More info -0.30 >More info petiole in WL petioles Original data GEO bulk
102 Whole root - low pH 24H 0.51 >More info 0.40 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
103 24h volatiles Sp. HRO-C48 -0.62 >More info -0.28 >More info 24h untreated whole seedling Original data GEO bulk
104 lib 0.67 >More info 0.23 >More info WT whole seedling Original data GEO bulk
105 oligomycin 1 h -0.67 >More info -0.23 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
106 shoot hypoxia total -0.35 >More info -0.55 >More info shoot control total Original data GEO bulk
107 myb61 xylem -0.37 >More info -0.53 >More info wt xylem xylem Original data GEO bulk
108 xyl-grown cell culture- 1h 1mM Glc 0.58 >More info 0.32 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
109 sid2 -0.55 >More info -0.34 >More info Col rosettes Original data GEO bulk
110 C58 3hpi -0.55 >More info -0.34 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
111 low CO2 + light -0.65 >More info -0.24 >More info normal CO2 + light Original data GEO bulk
112 petiole in FRD -0.60 >More info -0.29 >More info petiole in WL petioles Original data GEO bulk
113 swn-7 -0.59 >More info -0.30 >More info Col whole plant Original data GEO bulk
114 8 hr ammonium -0.54 >More info -0.34 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
115 miR mutant (higher order mutant) -0.61 >More info -0.27 >More info col control (higher order mutant) Original data GEO bulk
116 Dark 2day wt -0.60 >More info -0.28 >More info 0h wt Original data
117 MYB46-GR DEX 0.27 >More info 0.61 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
118 CHLD reduction 0.56 >More info 0.31 >More info Col-0 dex green tissue Original data GEO bulk
119 hepta mutant (higher order mutant) -0.55 >More info -0.32 >More info col control (higher order mutant) Original data GEO bulk
120 WT Red light 1h 0.61 >More info 0.26 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
121 bri1-116 0.14 >More info 0.73 >More info Col seedling Original data GEO bulk
122 Dark 3day wt -0.58 >More info -0.29 >More info 0h wt Original data
123 WT salt 12 h 0.57 >More info 0.30 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
124 gun1gun5 far-red pretreated -0.53 >More info -0.33 >More info WT far-red pretreated Original data GEO bulk
125 mutant acs6E (single mutant) 0.52 >More info 0.34 >More info col control (single mutant) Original data GEO bulk
126 detached inflorescences 24h -0.61 >More info -0.25 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
127 COL-0-Fe--root 0.51 >More info 0.35 >More info COL-0-Ctrl--root root Original data
128 shoot-10 μM DEX- 12 hr -0.60 >More info -0.26 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
129 Dark 2day hml -0.60 >More info -0.26 >More info 0h hml Original data
130 Dark 1day wt -0.57 >More info -0.29 >More info 0h wt Original data
131 tga1 tga4 2h KNO3 -0.53 >More info -0.32 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
132 phyABDE Rc50 0.55 >More info 0.30 >More info phyABDE Dark red light whole seedling Original data GEO bulk
133 camta1 root water -0.66 >More info -0.19 >More info Col-0 root water root Original data GEO bulk
134 hen1 0.63 >More info 0.22 >More info Ler Original data GEO bulk
135 6-trichlorophenoxyacetic acid 3 h 0.57 >More info 0.28 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
136 4d red light grown hmr-22 seedlings -0.64 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
137 12h volatiles Sp. HRO-C48 -0.64 >More info -0.21 >More info 12h untreated whole seedling Original data GEO bulk
138 exo70A1 -0.55 >More info -0.29 >More info Col-0 whole plant Original data GEO bulk
139 Dark 3day hml -0.58 >More info -0.26 >More info 0h hml Original data
140 Dark 3day ivd -0.57 >More info -0.27 >More info 0h ivd Original data
141 tetraploid -0.55 >More info -0.28 >More info diploid Original data GEO bulk
142 Heat 6h-recover 48h -0.54 >More info -0.29 >More info Heat 6h rosettes - 5 leaves stage Original data
143 root - 04% oxygen - 2h -0.18 >More info -0.65 >More info root - 21% oxygen - 2h Original data GEO bulk
144 CMV-A2b mutant -0.62 >More info -0.21 >More info Mock-At Aerial tissues Original data GEO bulk
145 leaf blade in FRD -0.59 >More info -0.24 >More info leaf blade in WL leaf blades Original data GEO bulk
146 2 hr Hypoxia IP RNA -0.54 >More info -0.28 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
147 Col leaf scrape 5 dpi 0.51 >More info 0.31 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
148 roottip hypoxia total -0.51 >More info -0.31 >More info roottip control total Original data GEO bulk
149 edr1 36 h powdery mildew -0.67 >More info -0.15 >More info Col-0 36 h powdery mildew Original data GEO bulk
150 csn5 (csn5a-2 csn5b) dark 0.52 >More info 0.29 >More info WT dark Original data GEO bulk
151 pip3 At2g19270 TDNA 9 -0.51 >More info -0.30 >More info Col-0 whole plant Original data GEO bulk
152 pGL1::GL1-GR Dex 24hours -0.55 >More info -0.26 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
153 sav3-2 light 0.61 >More info 0.20 >More info Col-0 light seedlings Original data GEO bulk
154 cell culture 4 h phytoprostane A1 0.66 >More info 0.15 >More info cell culture 4 h control Original data GEO bulk
155 Uniconazole 3 h 0.65 >More info 0.16 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
156 Mutant sav3-2 (WL) 0.61 >More info 0.20 >More info Col-0 (WL) Original data GEO bulk
157 csn3-1 dark 0.51 >More info 0.30 >More info WT dark Original data GEO bulk
158 det2 light-dark -0.57 >More info -0.24 >More info det2 light light-dark Original data GEO bulk
159 mil4 -0.56 >More info -0.24 >More info Col rosettes Original data GEO bulk
160 IAA 1h -0.50 >More info -0.30 >More info control 1h root Original data GEO bulk
161 root cells epidermis 140mM NaCl 20 hours -0.51 >More info -0.29 >More info root cells epidermis standard 1 hour root cells epidermis Original data
162 Nicotinamide-73hr -0.55 >More info -0.25 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
163 eif3h polysome 0.57 >More info 0.23 >More info WT polysome Original data GEO bulk
164 Light 0.5h polysome-bound 0.52 >More info 0.27 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
165 elevated CO2 low Mg root 0.63 >More info 0.16 >More info atmospheric CO2 low Mg root Root Original data
166 MYB12OX/tt4 -0.53 >More info -0.26 >More info Col-0 aerial part Original data
167 bak1-3 untreated 0.56 >More info 0.22 >More info WT untreated untreated Original data GEO bulk
168 phyABCDE Dark 0.60 >More info 0.18 >More info WT Dark Dark whole seedling Original data GEO bulk
169 Kas-1 -Fe 48h 0.58 >More info 0.20 >More info Kas-1 +Fe 24h roots Original data GEO bulk
170 Kas -Fe 48h Roots 0.58 >More info 0.20 >More info Kas +Fe 24h Roots Original data GEO bulk
171 hypoxic 0.61 >More info 0.17 >More info WT aerobic hypoxia Original data GEO bulk
172 ein2-1 +elf18 2h 0.57 >More info 0.21 >More info WT +elf18 2h elf18 Original data GEO bulk
173 Whole root - low pH 6H 0.52 >More info 0.25 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
174 gun4-1 -0.58 >More info -0.19 >More info WT Col-0 seedling Original data GEO bulk
175 mutant-line1135 0.58 >More info 0.19 >More info WT-control whole plant Original data GEO bulk
176 Tsu -Fe 24h Roots 0.57 >More info 0.20 >More info Tsu +Fe 24h Roots Original data GEO bulk
177 csn5 (csn5a-2 csn5b) light 0.57 >More info 0.20 >More info WT light Original data GEO bulk
178 light-hs 0.50 >More info 0.27 >More info light-control seedling Original data
179 Tsu-1 -Fe 24h 0.57 >More info 0.20 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
180 ddm1-12 0.58 >More info 0.19 >More info wt whole seedling Original data GEO bulk
181 short 17-degree- 0.26 >More info 0.51 >More info control short Original data GEO bulk
182 root - 04% oxygen - 48h -0.24 >More info -0.53 >More info root - 21% oxygen - 48h Original data GEO bulk
183 csn4-1 mutant 0.50 >More info 0.26 >More info WT dark Original data GEO bulk
184 spch -0.52 >More info -0.24 >More info Col-0 WT whole seedling Original data GEO bulk
185 24h light (+Lincomycin) -0.53 >More info -0.23 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
186 estradiole-induced ANAC092 0.50 >More info 0.25 >More info transgenic (empty vector inducible system) Original data GEO bulk
187 cca1-lhy 30m light -0.55 >More info -0.20 >More info 30m light whole seedlings Original data GEO bulk
188 tor mutant 0.52 >More info 0.23 >More info WT (Col) none seedlings Original data GEO bulk
189 shoot-10 μM DEX- 24hr -0.56 >More info -0.19 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
190 camta1-2 -0.51 >More info -0.24 >More info Col-0-WT Original data GEO bulk
191 HS 0.56 >More info 0.19 >More info noneHS Original data GEO bulk
192 Ws seedlings 0.50 >More info 0.25 >More info ged1 seedlings Original data GEO bulk
193 ged1 seedlings -0.50 >More info -0.25 >More info Ws seedlings Original data GEO bulk
194 triploid female excess 0.53 >More info 0.22 >More info tetraploid Original data GEO bulk
195 NJ15 0.13 >More info 0.62 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
196 Nicotinamide-93hr -0.54 >More info -0.20 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
197 pif4pif5 mut 1h FR 0.50 >More info 0.24 >More info WT 1h FR Original data GEO bulk
198 gun5 norflurazon -0.50 >More info -0.24 >More info gun5 control Original data GEO bulk
199 17 2h labelled -0.56 >More info -0.18 >More info 27 1h labelled 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
200 Col-7 Sucrose 0.50 >More info 0.24 >More info col-7 Original data GEO bulk
201 xyl-grown cell culture- 1h 1mM Suc 0.54 >More info 0.20 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
202 Red/FR Light45min -0.01 >More info 0.75 >More info FarRed Light 45min Original data Light treatments
203 root - 08% oxygen - 2h -0.15 >More info -0.59 >More info root - 21% oxygen - 2h Original data GEO bulk
204 seedling mSPL13 -0.56 >More info -0.17 >More info seedling Col-0 Original data GEO bulk
205 npr1 sni1 ssn2 0.59 >More info 0.14 >More info npr1 sni1 water water seedling Original data GEO bulk
206 Dark 0.50 >More info 0.23 >More info Control Original data GEO bulk
207 WOX1-1 -0.50 >More info -0.23 >More info Col-0 aerial part Original data
208 edr1 96 h powdery mildew -0.52 >More info -0.21 >More info Col-0 96 h powdery mildew Original data GEO bulk
209 2hr transitory KNO3 SR cell -0.58 >More info -0.15 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
210 seed germinating in countinuous light 24h SL 0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
211 2hr KCl control SR cell -0.60 >More info -0.12 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
212 seedling 3h after Gamma WT 0.50 >More info 0.22 >More info seedling day 1 unirradiated WT 3h Original data
213 R. amphibia submerged -0.52 >More info -0.20 >More info R. amphibia air Original data GEO bulk
214 MYB29 OE 0.50 >More info 0.21 >More info WT for MYB29/76 Original data GEO bulk
215 piffq 2d WL 0.53 >More info 0.18 >More info WT 2d WL whole seedling Original data GEO bulk
216 Light 0.5h steady-state 0.51 >More info 0.20 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
217 Nicotinamide-69hr -0.55 >More info -0.15 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
218 shl-2 Pool -0.56 >More info -0.14 >More info Ler Pool seedling Original data GEO bulk
219 35SpBVR3 -0.53 >More info -0.17 >More info WT Original data GEO bulk
220 Shoot -P -0.57 >More info -0.13 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
221 ein2-1 untreated 0.50 >More info 0.20 >More info WT untreated untreated Original data GEO bulk
222 ebs Pool -0.59 >More info -0.11 >More info Ler Pool seedling Original data GEO bulk
223 Shoot submergence 7h -0.70 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
224 FOX line K16331 0.51 >More info 0.19 >More info empty vector control (T3) FOX lines Original data GEO bulk
225 seedling 3h after HZE WT -0.72 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
226 CHLM overexpression 0.50 >More info 0.20 >More info Col-0 estr green tissue Original data GEO bulk
227 IAA7mII over-expressor IAA Treated 0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
228 35S:GIF -0.52 >More info -0.17 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
229 an3-4 leaf primordia -0.55 >More info -0.14 >More info WT leaf primordia Original data GEO bulk
230 low water potential 0.52 >More info 0.17 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
231 GR::bZIP1 +CHX +N +DEX -0.52 >More info -0.17 >More info GR::bZIP1 empty vector control +CHX +N +DEX 1 µM DEX in Ethanol Original data
232 Naphthyl- phthalamic acid 3 h 0.54 >More info 0.14 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
233 piffq FR 3h 0.54 >More info 0.14 >More info WT FR 3h whole seedling Original data GEO bulk
234 rosette leaves lcr -0.55 >More info -0.13 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
235 Mutant ein2(leaf) 0.50 >More info 0.18 >More info Col-0 (leaf) Original data GEO bulk
236 2hr continuous KNO3 SR cell -0.58 >More info -0.10 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
237 eto1-4 + AVG -0.52 >More info -0.15 >More info eto1-4 whole seedling Original data GEO bulk
238 WT in -N 0.50 >More info 0.17 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
239 agb1 gpa1 +ABA LF -0.51 >More info -0.16 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
240 Laer pretreat GA Flg22 1h -0.04 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
241 Split KNO3 roots - 2hours -0.50 >More info -0.16 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
242 Col-0 35S:MBS1 HL 3h 0.51 >More info 0.15 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
243 sfr6 drought 0.50 >More info 0.16 >More info WT drought All aerial tissue Original data GEO bulk
244 tfl1-1-23ºC -0.55 >More info -0.11 >More info WT-23ºC Original data GEO bulk
245 3d old, both 10mM sucrose and 0.2µM SMX 0.55 >More info 0.11 >More info control Whole seedling Original data GEO bulk
246 MG132 3 h 0.66 >More info -0.00 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
247 sfr2 control 0.62 >More info 0.04 >More info WT control All aerial tissue Original data GEO bulk
248 elevated CO2 high Mg root 0.54 >More info 0.11 >More info atmospheric CO2 high Mg root Root Original data
249 pap1-D -0.50 >More info -0.15 >More info Col-0 aerial part Original data
250 Mutant nph4-1 (IAA) 0.53 >More info 0.12 >More info Col (IAA) Original data GEO bulk
251 ein2 mutant roots mock 0.50 >More info 0.15 >More info roots mock Original data GEO bulk
252 ein2 mutant roots IAA 0.59 >More info 0.06 >More info roots ethylene Original data GEO bulk
253 rrd1 IBA 0.07 >More info 0.58 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
254 root cells endodermis 140mM NaCl 48 hours -0.57 >More info -0.07 >More info root cells endodermis standard 1 hour root cells endodermis Original data
255 nbp35-3/- -0.56 >More info -0.07 >More info WT whole seedling Original data GEO bulk
256 NAA 3h 0.53 >More info 0.10 >More info before treatment NAA root Original data GEO bulk
257 4C 1h -0.53 >More info -0.09 >More info 4C 0h Original data GEO bulk
258 AFB1 PSTDC3000 24h -0.52 >More info -0.09 >More info Col PSTDC3000 24h Leaf Original data GEO bulk
259 Dark 2day ivd -0.60 >More info -0.01 >More info 0h ivd Original data
260 npr1 sni1 SA -0.57 >More info -0.04 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
261 Whole root - low pH 1H -0.53 >More info -0.08 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
262 Heat shock optimum -0.04 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
263 SQ8 roots 2hr KNO3 nitrogen -0.55 >More info -0.05 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
264 Propiconazole 3 h 0.71 >More info -0.11 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
265 bbx24 in Simulated Shade -0.08 >More info -0.52 >More info WT in simulated shade shade seedling Original data
266 dyt1 0.54 >More info 0.05 >More info WT anther Original data GEO bulk
267 sav3-2 shade 0.53 >More info 0.06 >More info Col-0 shade seedlings Original data GEO bulk
268 Mutant sav3-2 (SH) 0.53 >More info 0.06 >More info Col-0 (SH) Original data GEO bulk
269 oligomycin 4 h -0.51 >More info -0.08 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
270 Red Light 45min -0.51 >More info -0.08 >More info White Light 45min Original data Light treatments
271 root hypoxia pPEP -0.52 >More info -0.06 >More info root hypoxia total hypoxia root Original data GEO bulk
272 noa1-2 -0.52 >More info -0.06 >More info Col-0 whole seedlings Original data GEO bulk
273 Mutant bri1 -0.63 >More info 0.06 >More info Ws-2 Original data Comparison of plant hormone related mutant
274 Kas2 roots 2hr KNO3 nitrogen -0.50 >More info -0.06 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
275 atmospheric CO2 low Mg shoot -0.56 >More info 0.00 >More info atmospheric CO2 normal Mg shoot Shoot Original data
276 35S:VND7-VP16-GR+CHX 0.06 >More info 0.50 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
277 -Sulfate 2 h 0.58 >More info -0.02 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
278 Mutant iaa5_6_19 0.58 >More info -0.02 >More info Col Original data GEO bulk
279 pepr1-1 Pepr2-3 untreated 0.62 >More info -0.07 >More info WT untreated untreated Original data GEO bulk
280 P.syringae vir 4 h (leaf) -0.03 >More info -0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
281 gid1a gid1b-1 gid1c-2 1 hr 100 uM GA3 0.54 >More info -0.00 >More info ga-1 1 hr 100 uM GA3 Original data GEO bulk
282 1hr-pH4.5 -0.52 >More info -0.02 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
283 root longitudinal zone-4 low sulfur -0.50 >More info -0.04 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
284 gabaculin -0.50 >More info -0.03 >More info WT Col-0 seedling Original data GEO bulk
285 axr2 0.51 >More info 0.01 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
286 root hypoxia pWOL -0.54 >More info 0.02 >More info root hypoxia total hypoxia root Original data GEO bulk
287 IRP1-OE-Ctrl--root 0.53 >More info -0.02 >More info COL-0-Ctrl--root root Original data
288 arr10 arr12 0.59 >More info -0.09 >More info DMSO--WT DMSO roots Original data GEO bulk
289 root longitudinal zone-2 -Fe 0.56 >More info -0.06 >More info root longitudinal zone-2 standard Original data GEO bulk
290 Cs shoot -0.13 >More info 0.63 >More info control shoot Original data GEO bulk
291 phyB mutant 16C 10hrs 0.50 >More info -0.01 >More info 16C 10h whole plant excluding roots Original data GEO bulk
292 0h light (+Lincomycin) 0.50 >More info -0.01 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
293 6h +Pi 0.60 >More info -0.12 >More info 6h -Pi root Original data GEO bulk
294 root - 08% oxygen - 48h 0.17 >More info -0.65 >More info root - 21% oxygen - 48h Original data GEO bulk
295 Mutant arf2-6 (IAA) -0.55 >More info 0.09 >More info Col (IAA) Original data GEO bulk
296 Shoot apex inflorescence (after bolting) -0.20 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
297 Laer Flg22(Agrobacterium) 2h 0.07 >More info -0.52 >More info Laer Control leaf discs Original data GEO bulk
298 Col0-PsmES4326-24hpi -0.17 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
299 Aerobic e1 ate2 0.13 >More info -0.57 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
300 Osmotic Stress 24 h (root) -0.50 >More info 0.07 >More info Stress mock 24 h (root) Original data Stress treatments
301 opr3 OPDA 22 h -0.51 >More info 0.09 >More info opr3 0 h Original data GEO bulk
302 Heat 2 days recovery -0.50 >More info 0.10 >More info Mock 2 days recovery seedling Original data GEO bulk
303 CCA1-ox 6am non-polysomal -0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
304 root - 08% oxygen - 30min 0.29 >More info -0.67 >More info root - 21% oxygen - 30min Original data GEO bulk
305 Col BTH -0.30 >More info 0.67 >More info Col rosettes Original data GEO bulk
306 CsUBC13-OE-es -0.54 >More info 0.17 >More info Col-es root Original data GEO bulk
307 Mutant iaa17-6 0.54 >More info -0.27 >More info Col Original data GEO bulk
308 Leafminer damaged seedlings -0.30 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
309 siliques AtHb1 control -0.29 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
310 bZIP1ko mutant N+Light- 0.50 >More info -0.29 >More info WT-sib N+Light- whole plant Original data GEO bulk
311 AsAKiin11 T1 0.55 >More info -0.48 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data