4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT light
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List of experiments correlated with "WT light"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT light		 Correlation to
WT light		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT light 1.00 >More info 1.00 >More info WT dark Original data GEO bulk
2 WT Red light 18h 0.75 >More info 0.83 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
3 WT Seedling BL 0.79 >More info 0.79 >More info WT Seedling Dark Original data GEO bulk
4 CabpBVR2 -0.76 >More info -0.79 >More info WT Original data GEO bulk
5 phr1 phl1 Root-Pi -0.78 >More info -0.76 >More info WT Shoot+Pi roots Original data GEO bulk
6 35SpBVR3 -0.75 >More info -0.79 >More info WT Original data GEO bulk
7 csn5 (csn5a-2 csn5b) dark 0.79 >More info 0.74 >More info WT dark Original data GEO bulk
8 csn4-1 mutant 0.79 >More info 0.73 >More info WT dark Original data GEO bulk
9 csn3-1 dark 0.79 >More info 0.70 >More info WT dark Original data GEO bulk
10 cop1 Seedling Dark 0.75 >More info 0.73 >More info WT Seedling Dark Original data GEO bulk
11 etiolated cop1BBX22-GFPox 0.73 >More info 0.74 >More info etiolated Col-0 whole seedlings Original data GEO bulk
12 aerial organ callus inducing medium 96 h -0.68 >More info -0.74 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
13 phyB Dark 0.70 >More info 0.71 >More info WT(Ler) Dark Original data GEO bulk
14 WT(Ler) Rc50 0.69 >More info 0.72 >More info WT(Ler) Dark Original data GEO bulk
15 WT Rc50 0.69 >More info 0.71 >More info WT Dark red light whole seedling Original data GEO bulk
16 phyAphyB Dark -0.69 >More info -0.71 >More info phyB Dark Original data GEO bulk
17 phr1 Shoot-Pi 0.69 >More info 0.69 >More info WT Root-Pi shoots Original data GEO bulk
18 WT(Ler) Rc15 0.66 >More info 0.72 >More info WT(Ler) Dark Original data GEO bulk
19 Col-0 low oxygen -0.71 >More info -0.67 >More info Col-0 Original data GEO bulk
20 bri1-116 0.65 >More info 0.73 >More info Col seedling Original data GEO bulk
21 Dark 4 h pls RedLight 1min 0.60 >More info 0.76 >More info Dark 4 h Original data Light treatments
22 atmyc2 cop1 Seedling Dark 0.64 >More info 0.71 >More info WT Seedling Dark Original data GEO bulk
23 dor drought -0.57 >More info -0.78 >More info WT drought Original data GEO bulk
24 Light 4h steady-state 0.66 >More info 0.67 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
25 col-5 DC3000 12h -0.61 >More info -0.72 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
26 Light 4h polysome-bound 0.64 >More info 0.67 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
27 aerial organ callus inducing medium 48 h -0.65 >More info -0.66 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
28 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.60 >More info 0.71 >More info 2d dark-grown WT seedling Original data GEO bulk
29 Cor 10h -0.66 >More info -0.65 >More info Mock 10h Cor Original data GEO bulk
30 Shoot dark control 24h -0.65 >More info -0.65 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
31 col-5 hrpA 12h -0.60 >More info -0.70 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
32 Dark 4 h pls UV-A 5 min 0.60 >More info 0.69 >More info Dark 4 h Original data Light treatments
33 pif4pif5 mut 1h FR 0.61 >More info 0.66 >More info WT 1h FR Original data GEO bulk
34 MPK6 ox Root Hypoxia 0.51 >More info 0.76 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
35 Osmotic Stress 24 h (shoot) -0.61 >More info -0.65 >More info Stress mock 24 h (shoot) Original data Stress treatments
36 DC3000 7h -0.59 >More info -0.67 >More info Mock 7h DC3000 Original data GEO bulk
37 ABA DFPM -0.64 >More info -0.62 >More info control Original data GEO bulk
38 Col-0 C2H4 24h -0.65 >More info -0.61 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
39 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.57 >More info 0.69 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
40 35:SUB1C -0.57 >More info -0.68 >More info WT whole seedling Original data GEO bulk
41 Laer treat paclobutrazol (PAC) -0.65 >More info -0.60 >More info Laer Control leaf discs Original data GEO bulk
42 Shoot -K -0.60 >More info -0.65 >More info Control-shoot Original data GEO bulk
43 K starvation (shoot) -0.60 >More info -0.65 >More info Ws (shoot) Original data GEO bulk
44 rosettes WT drought -0.58 >More info -0.66 >More info rosettes WT watered Original data GEO bulk
45 Botrytis cinerea 48h -0.59 >More info -0.65 >More info control 48h Original data GEO bulk
46 Laer Flg22 2h -0.62 >More info -0.62 >More info Laer Control leaf discs Original data GEO bulk
47 Shoot submergence 24h -0.63 >More info -0.60 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
48 rosettes myoox drought -0.55 >More info -0.67 >More info rosettes myoox watered Original data GEO bulk
49 35S-MIF1 light grown -0.53 >More info -0.69 >More info Light-grown WT control Original data GEO bulk
50 erf104-ko Flg22 4h -0.62 >More info -0.59 >More info erf104-ko H2O 4h Original data GEO bulk
51 miR393 0h 0.57 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
52 Dark 3day ivd -0.67 >More info -0.53 >More info 0h ivd Original data
53 clf-28 swn-7 -0.55 >More info -0.65 >More info Col whole plant Original data GEO bulk
54 gpa1 -ABA LF -0.55 >More info -0.64 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
55 phyABDE Rc50 0.63 >More info 0.56 >More info phyABDE Dark red light whole seedling Original data GEO bulk
56 35S:VND7-VP16-GR+CHX -0.47 >More info -0.72 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
57 Phaseolicola 2 h (leaf) -0.53 >More info -0.65 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
58 detached inflorescences 24h -0.56 >More info -0.62 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
59 Dark 3day wt -0.61 >More info -0.57 >More info 0h wt Original data
60 35S:RPS4 eds1-2 24h 0.57 >More info 0.61 >More info 35S:RPS4 24h leaves Original data
61 DFPM -0.58 >More info -0.60 >More info control Original data GEO bulk
62 IMI 4mM -0.57 >More info -0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
63 HopZ1a treated -0.57 >More info -0.61 >More info col Original data GEO bulk
64 Shoot dark control 7h -0.62 >More info -0.55 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
65 efr-1 +elf18 10h 0.54 >More info 0.63 >More info WT +elf18 10h elf18 Original data GEO bulk
66 aerial organ callus inducing medium 24h -0.61 >More info -0.56 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
67 CMP 24hr -0.60 >More info -0.56 >More info Acetone 24hr root Original data GEO bulk
68 T6 leaf-drought -0.46 >More info -0.70 >More info T6 leaf-well watered Original data GEO bulk
69 mdh -0.44 >More info -0.72 >More info Col Original data GEO bulk
70 low water potential -0.59 >More info -0.56 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
71 Sulfometuron EC50 -0.56 >More info -0.59 >More info Carrier Original data GEO bulk
72 Col-0 under 4 days salt -0.61 >More info -0.53 >More info Col-0 under control 4 days salt treatment rosette Original data
73 ataf1-1 mutant Col-0 Bgh inoculated -0.54 >More info -0.60 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
74 csn4-1 dark -0.58 >More info -0.56 >More info WT light Original data GEO bulk
75 Col-0 Root 100 mM ATP 30 min 0.68 >More info 0.45 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
76 aerial organ callus inducing medium 12 h -0.58 >More info -0.55 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
77 Col-0 9 hpi A. brassicicola -0.54 >More info -0.59 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
78 Laer pretreat GA+JA Flg22 2h -0.59 >More info -0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
79 35S:RPS4 eds1-2 8h 0.57 >More info 0.56 >More info 35S:RPS4 8h leaves Original data
80 Laer Flg22 1h -0.57 >More info -0.55 >More info Laer Control leaf discs Original data GEO bulk
81 Laer pretreat GA+JA Flg22 1h -0.61 >More info -0.51 >More info Laer pretreat water control leaf discs Original data GEO bulk
82 E.coli 0157 H7 7h -0.51 >More info -0.61 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
83 pif4pif5 mut dark 0.34 >More info 0.78 >More info WT dark Original data GEO bulk
84 ABA control -0.43 >More info -0.69 >More info No ABA control Original data GEO bulk
85 Col-0 +ABA LF -0.46 >More info -0.65 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
86 Seedling KUA1-IOX est -0.43 >More info -0.68 >More info Seedling KUA1-IOX mock Original data
87 pad4-PsmES4326-24hpi 0.54 >More info 0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
88 HopZ1a treated ulp1c ulp1d -0.54 >More info -0.57 >More info col Original data GEO bulk
89 agb1 gpa1 -ABA LF -0.49 >More info -0.62 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
90 col-5 DC3000-avrRpm 4h -0.49 >More info -0.62 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
91 E.coli TUV86 2 fliC 7h -0.54 >More info -0.56 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
92 Col leaf scrape 5 dpi -0.63 >More info -0.47 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
93 C2 leaf-drought -0.51 >More info -0.59 >More info C2 leaf-well watered Original data GEO bulk
94 low CO2 + dark -0.55 >More info -0.55 >More info normal CO2 + light Original data GEO bulk
95 bak1-3 +Pep2 10h -0.47 >More info -0.63 >More info WT +Pep2 10h Pep2 Original data GEO bulk
96 gun1-1 +lincomycin 0.55 >More info 0.54 >More info Col-0 +lincomycin Original data GEO bulk
97 WT in -N -0.55 >More info -0.54 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
98 gul2-1 mutant -0.54 >More info -0.55 >More info WT 7 day-old whole seedlings Original data
99 ced1 0.54 >More info 0.55 >More info WT PEG 6hr seedlings Original data GEO bulk
100 Dark 2day wt -0.59 >More info -0.50 >More info 0h wt Original data
101 Dark 4 h pls UV-AB 5min 0.58 >More info 0.51 >More info Dark 4 h Original data Light treatments
102 rosettes drought -0.50 >More info -0.58 >More info rosettes watered Original data GEO bulk
103 GST NPP1 4 h (leaf) -0.52 >More info -0.56 >More info Mock 4 h (leaf) Original data Elicitor treatments
104 Laer Flg22+GA 2h -0.55 >More info -0.53 >More info Laer Control leaf discs Original data GEO bulk
105 Dark 3day hml -0.57 >More info -0.51 >More info 0h hml Original data
106 Flagellin 4 h (leaf) -0.53 >More info -0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
107 col-5 hrpA 2h -0.51 >More info -0.56 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
108 rosettes atx drought -0.53 >More info -0.54 >More info rosettes atx watered Original data GEO bulk
109 Laer pretreat GA+JA Flg22 0h -0.60 >More info -0.46 >More info Laer pretreat water control leaf discs Original data GEO bulk
110 WT-elf18 -0.54 >More info -0.52 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
111 Laer pretreat GA Flg22 0h -0.57 >More info -0.49 >More info Laer pretreat water control leaf discs Original data GEO bulk
112 Dark 2day hml -0.56 >More info -0.50 >More info 0h hml Original data
113 camta1/2/3 warm -0.51 >More info -0.55 >More info WT warm entire aerial part Original data GEO bulk
114 mkk1/mkk2 24h BTH rep -0.52 >More info -0.54 >More info Col-0 24h BTH rep Original data GEO bulk
115 SLWF infested -0.56 >More info -0.50 >More info SLWF uninfested rosette tissue Original data GEO bulk
116 DC3000 2 h (leaf) -0.47 >More info -0.59 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
117 AvrRpm1 2 h (leaf) -0.48 >More info -0.58 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
118 35S::ERF104 Flg22 4h -0.45 >More info -0.61 >More info 35S::ERF104 H2O 4h Original data GEO bulk
119 bZIP1ko mutant N+Light+ -0.44 >More info -0.62 >More info WT-sib N+Light+ whole plant Original data GEO bulk
120 WT Root Hypoxia 0.47 >More info 0.59 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
121 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.49 >More info -0.57 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
122 Pto inoculated -0.52 >More info -0.53 >More info col Original data GEO bulk
123 hrcC -0.53 >More info -0.52 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
124 4d red light grown hmr-5 seedlings -0.51 >More info -0.54 >More info 4d red light grown WT(Col-0) seedlings Original data
125 24h light (+Lincomycin) -0.50 >More info -0.55 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
126 Estradiol4 days -0.44 >More info -0.61 >More info Col Original data GEO bulk
127 flu over-tAPX -0.49 >More info -0.56 >More info WT Col Original data GEO bulk
128 estradiol induced LEC1 -0.44 >More info -0.61 >More info control Original data GEO bulk
129 eds16 whole leaf 5dpi 0.46 >More info 0.59 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
130 Cs shoot -0.25 >More info -0.80 >More info control shoot Original data GEO bulk
131 dorn1-1 Root MES buffer 30 min 0.41 >More info 0.64 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
132 Cor hrpS 10h -0.57 >More info -0.47 >More info Mock 10h Cor hrpS Original data GEO bulk
133 mpk6-ko Flg22 4h -0.44 >More info -0.60 >More info mpk6-ko H2O 4h Original data GEO bulk
134 agb1 -ABA LF -0.42 >More info -0.62 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
135 fri-flc -0.46 >More info -0.58 >More info WT Original data GEO bulk
136 AvrRpt2 Col-0 6hpi -0.55 >More info -0.48 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
137 CCA14 dark late -0.58 >More info -0.45 >More info Col dark late Original data GEO bulk
138 WT flg22 2h -0.59 >More info -0.44 >More info WT 0h Leaf tissue Original data GEO bulk
139 Ambient CO2 expanding leaf 0.60 >More info 0.43 >More info Control for tissue data expanding leaf Original data
140 eto1-4 + AVG -0.42 >More info -0.61 >More info eto1-4 whole seedling Original data GEO bulk
141 Shoot -Cs -0.42 >More info -0.61 >More info Control-shoot Original data GEO bulk
142 WT (Col-0) inflorescence drought day 10 -0.52 >More info -0.50 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
143 Nicotinamide-69hr -0.55 >More info -0.47 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
144 tbf1-mock spray -0.52 >More info -0.50 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
145 hrpA 7h -0.50 >More info -0.52 >More info Mock 7h hrpA Original data GEO bulk
146 axr2-BR 0.53 >More info 0.49 >More info BR BR dark-grown seedlings Original data GEO bulk
147 ein2-1 9 hpi A. brassicicola -0.48 >More info -0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
148 Leafminer locally damaged thaliana seedlings -0.50 >More info -0.51 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
149 Fenclorim 24hr -0.51 >More info -0.50 >More info Acetone 24hr root Original data GEO bulk
150 AtLysM RLK1 mutant water 0.54 >More info 0.47 >More info WT water Original data GEO bulk
151 NAA -AA -0.52 >More info -0.49 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
152 SCL3 OE -0.61 >More info -0.40 >More info Col-0 whole root Original data GEO bulk
153 Laer Flg22+GA 1h -0.51 >More info -0.50 >More info Laer Control leaf discs Original data GEO bulk
154 Shoot apex inflorescence (after bolting) 0.36 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
155 Col whole leaf 5dpi -0.48 >More info -0.53 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
156 Ambient CO2 leaf primordia 0.57 >More info 0.43 >More info Control for tissue data leaf primordia Original data
157 axr2 0.52 >More info 0.48 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
158 seedlings protease IV -0.54 >More info -0.46 >More info seedlings nontreated control whole seedling Original data
159 WT cotyledons 0.58 >More info 0.42 >More info Control for tissue data cotyledons Original data
160 RPL18 TuMV inoculated total RNA -0.51 >More info -0.49 >More info mock inoculated total RNA PO Original data GEO bulk
161 2hr continuous KNO3 ECR cell -0.36 >More info -0.64 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
162 Dex-rga(delta17) 4h GA4+DEX 0.45 >More info 0.55 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
163 GST-overexpression seedlings control -0.47 >More info -0.53 >More info WT seedlings control Seedlings Original data
164 Col-0 norflurazon -0.54 >More info -0.45 >More info Col-0 control Original data GEO bulk
165 pif3 Dark 0h 0.50 >More info 0.49 >More info WT Dark 0h etiolated seedling Original data GEO bulk
166 Dark 6h ivd -0.55 >More info -0.44 >More info 0h ivd Original data
167 hsfa1 quadruple mutant -0.50 >More info -0.49 >More info WT (Col-0) whole seedling Original data GEO bulk
168 mkk1/mkk2 control rep -0.50 >More info -0.49 >More info Col-0 Time 0 rep Original data GEO bulk
169 Col-Luc WT 3h antimycin A -0.50 >More info -0.49 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
170 ulp1c ulp1d +Pto -0.45 >More info -0.54 >More info ulp1c ulp1d mock Original data GEO bulk
171 WT AntimycinA 3h -0.39 >More info -0.60 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
172 bHLH122 ox 0.49 >More info 0.50 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
173 gul2-1 bri1-5 mutant -0.44 >More info -0.55 >More info WT 7 day-old whole seedlings Original data
174 dde2-2 9 hpi A. brassicicola -0.47 >More info -0.52 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
175 npr1-1 SA 0.50 >More info 0.48 >More info Col-0 SA complete seedling Original data
176 Laer pretreat GA Flg22 2h -0.57 >More info -0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
177 Rosette leaf No12 0.58 >More info 0.40 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
178 Col-0 flu HL 3h -0.51 >More info -0.47 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
179 PAHs stress -0.52 >More info -0.46 >More info exp control phenanthrene whole plants Original data GEO bulk
180 root longitudinal zone-3 -Fe -0.36 >More info -0.62 >More info root longitudinal zone-3 standard Original data GEO bulk
181 T8 leaf-drought -0.46 >More info -0.52 >More info T8 leaf-well watered Original data GEO bulk
182 root - 04% oxygen - 48h 0.45 >More info 0.53 >More info root - 21% oxygen - 48h Original data GEO bulk
183 npr1-PsmES4326-24hpi 0.46 >More info 0.52 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
184 anac017-2 AntimycinA 3h 0.44 >More info 0.54 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
185 WT (Col-0) inflorescence drought day 5 -0.51 >More info -0.46 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
186 EL (leaves 1-2) 14DAS 0.54 >More info 0.43 >More info Control for tissue data Original data GEO bulk
187 penta Alternaria 3dpi -0.51 >More info -0.46 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
188 WT Col-0 Bgh inoculated -0.42 >More info -0.55 >More info WT Col-0 Un-inoculated Original data GEO bulk
189 Fenclorim 4hr -0.46 >More info -0.51 >More info Acetone 4hr root Original data GEO bulk
190 cpr5scv1 -0.47 >More info -0.50 >More info WT(COL) Original data GEO bulk
191 del1-1 mutant 5d uninfected -0.33 >More info -0.64 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
192 sicy-192 cotyledons -0.50 >More info -0.46 >More info WT cotyledons cotyledons Original data
193 L2.4 mutant 0.52 >More info 0.44 >More info Wt Original data GEO bulk
194 root hypoxia pGL2 0.35 >More info 0.61 >More info root hypoxia total hypoxia root Original data GEO bulk
195 cs26 short-day 0.43 >More info 0.53 >More info Leaves-WT-SD leaf Original data GEO bulk
196 low CO2 + light -0.38 >More info -0.58 >More info normal CO2 + light Original data GEO bulk
197 seedlings-week-old RECA1-overexpressing
transgenic		 -0.43 >More info -0.53 >More info seedlings-week-old Col-0 seedlings Original data
198 wrky33 Bc inoculation 14h -0.53 >More info -0.42 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
199 Nicotinamide-53hr -0.50 >More info -0.45 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
200 WT leaf-drought -0.44 >More info -0.51 >More info WT leaf-well watered Original data GEO bulk
201 WT Shoot-Pi -0.44 >More info -0.51 >More info WT Shoot+Pi shoots Original data GEO bulk
202 35:SUB1A -0.38 >More info -0.57 >More info WT whole seedling Original data GEO bulk
203 CMV-WT -0.45 >More info -0.50 >More info Mock-At Aerial tissues Original data GEO bulk
204 dark +H2O2 0.30 >More info 0.65 >More info dark 5 mM H2O2 seedling Original data GEO bulk
205 Red Light 4 h -0.39 >More info -0.55 >More info White Light 4 h Original data Light treatments
206 exo70A1 -0.52 >More info -0.42 >More info Col-0 whole plant Original data GEO bulk
207 Col ozone 2d -0.42 >More info -0.52 >More info Col clean-air 2d ozone Original data GEO bulk
208 cpr5npr1svi1 -0.43 >More info -0.51 >More info WT(COL) Original data GEO bulk
209 Shoot apex vegetative &Young leaves 0.54 >More info 0.39 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
210 Differentiation 12h -0.55 >More info -0.38 >More info Differentiation 0h leaves Original data
211 SCR-GR Time 1H Dex -0.27 >More info -0.66 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
212 col-5 DC3000 4h -0.40 >More info -0.53 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
213 pif4pif5 mut 24h FR 0.41 >More info 0.52 >More info WT 24h FR Original data GEO bulk
214 upf3 -0.30 >More info -0.63 >More info WT whole plant Original data GEO bulk
215 ABA SA 24h -0.21 >More info -0.72 >More info EtOH 24h 24hr Original data GEO bulk
216 cpr5npr1 -0.43 >More info -0.50 >More info WT(COL) Original data GEO bulk
217 WT Bc inoculation 14h -0.53 >More info -0.39 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
218 flu -0.40 >More info -0.52 >More info WT Col Original data GEO bulk
219 fil-8 yab3-2 -0.39 >More info -0.53 >More info wt Apices Original data GEO bulk
220 Full C2 T2 -0.51 >More info -0.41 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
221 Paclobutrazol 12 h -0.33 >More info -0.59 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
222 ACN1-2 0.21 >More info 0.71 >More info col-7 Original data GEO bulk
223 Apex 14DAS 0.52 >More info 0.39 >More info Control for tissue data Original data GEO bulk
224 RPL18 TuMV inoculated polysomal RNA -0.50 >More info -0.41 >More info mock inoculated polysomal RNA PO Original data GEO bulk
225 eds16 whole leaf 7dpi 0.41 >More info 0.50 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
226 21h-DC3000 hrpA 0.21 >More info 0.70 >More info 21h-DC3000 leaves Original data GEO bulk
227 WT roots - Fe -0.29 >More info -0.62 >More info WT roots + Fe Roots Original data GEO bulk
228 arp6-10 12 ºC 0.34 >More info 0.56 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
229 tbf1-elf18 0.53 >More info 0.37 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
230 IAA Treated 0.36 >More info 0.54 >More info Negative Control Original data GEO bulk
231 gh3.5-1D 48 hpi -0.40 >More info -0.50 >More info Col-0 uninoculated Original data GEO bulk
232 Expanding leaf 0.55 >More info 0.34 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
233 ABA 24h -0.33 >More info -0.56 >More info EtOH 24h 24hr Original data GEO bulk
234 Nicotinamide-77hr -0.50 >More info -0.39 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
235 toc1-1-85hr 0.28 >More info 0.61 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
236 WT hypoxia -0.54 >More info -0.34 >More info WT normoxia whole rosette Original data
237 ML (Mature leaves) 35DAS 0.55 >More info 0.33 >More info Control for tissue data Original data GEO bulk
238 Ambient CO2 fully expanded leaf 0.55 >More info 0.33 >More info Control for tissue data fully expanded leaf Original data
239 root stele -S 0.32 >More info 0.56 >More info root stele pH5.7 Original data GEO bulk
240 Col-0 +lincomycin -0.34 >More info -0.54 >More info Col-0 -lincomycin Original data GEO bulk
241 hrpA fliC 7h -0.52 >More info -0.36 >More info Mock 7h hrpA fliC Original data GEO bulk
242 C58 35dpi -0.51 >More info -0.37 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
243 Prohexadione 12 h -0.28 >More info -0.60 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
244 Dex-rga(delta17) 2h GA4+DEX 0.36 >More info 0.52 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
245 erf104-ko H2O 4h 0.53 >More info 0.34 >More info Col-0 H2O 4h Original data GEO bulk
246 pnp1-1 3h +P -0.51 >More info -0.36 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
247 atmospheric CO2 low Mg shoot -0.50 >More info -0.37 >More info atmospheric CO2 normal Mg shoot Shoot Original data
248 root epidermis and lateral root cap -S 0.30 >More info 0.57 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
249 IRP1-OE-Fe--shoot -0.30 >More info -0.57 >More info COL-0-Fe--shoot shoot Original data
250 Proximalhalf (leaf7) 0.54 >More info 0.32 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
251 gai Control -0.56 >More info -0.30 >More info Laer Control leaf discs Original data GEO bulk
252 gpa1 -ABA GC 0.30 >More info 0.56 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
253 SA 24h -0.33 >More info -0.53 >More info EtOH 24h 24hr Original data GEO bulk
254 Mutant hy5 (High Light) -0.36 >More info -0.50 >More info Col-0 (High Light) Original data GEO bulk
255 root longitudinal zone-4 -Fe -0.26 >More info -0.60 >More info root longitudinal zone-4 standard Original data GEO bulk
256 hy5 high light -0.36 >More info -0.50 >More info Col-O high light Original data GEO bulk
257 seed germinating in countinuous light 24h SL 0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
258 pmr4-1 powdery mildew -0.25 >More info -0.60 >More info WT powdery mildew uninoculated Original data GEO bulk
259 A2hsfa1-ox in quadruple mutant 0.51 >More info 0.33 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
260 Petiol (leaf7) 0.53 >More info 0.31 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
261 leaf 0.51 >More info 0.33 >More info Control for tissue data leaf Original data GEO bulk
262 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.52 >More info -0.32 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
263 rosette Dark Wounded -0.29 >More info -0.55 >More info rosette Dark Control Original data GEO bulk
264 WT polysome 0.34 >More info 0.50 >More info WT non-polysome Original data GEO bulk
265 ABA JA 24h -0.14 >More info -0.70 >More info EtOH 24h 24hr Original data GEO bulk
266 ABA 1 h -0.17 >More info -0.66 >More info Mock 1 h Original data Basic hormone treatment of seedlings
267 Heat 2 days recovery -0.29 >More info -0.54 >More info Mock 2 days recovery seedling Original data GEO bulk
268 amiRAP hypoxic 0.30 >More info 0.53 >More info hypoxic hypoxia Original data GEO bulk
269 smg5-2 -0.32 >More info -0.51 >More info WT whole plant Original data GEO bulk
270 6h volatiles Sp. HRO-C48 -0.31 >More info -0.52 >More info 6h untreated whole seedling Original data GEO bulk
271 Mutant arf2-6 (IAA) 0.30 >More info 0.52 >More info Col (IAA) Original data GEO bulk
272 root - 04% oxygen - 2h 0.14 >More info 0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
273 Col-0 +ABA GC -0.25 >More info -0.57 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
274 det2 light-dark -0.51 >More info -0.30 >More info det2 light light-dark Original data GEO bulk
275 ABA 3 h -0.26 >More info -0.55 >More info Mock 3 h Original data Basic hormone treatment of seedlings
276 gun1gun5 Norflurazon 0.30 >More info 0.51 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
277 CCA14 dark early -0.31 >More info -0.50 >More info Col dark early Original data GEO bulk
278 2hr transitory KNO3 ECR cell -0.27 >More info -0.54 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
279 toc1-1-81hr 0.24 >More info 0.57 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
280 Cotyledons 0.54 >More info 0.26 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
281 Distal half (leaf7) 0.52 >More info 0.28 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
282 til1-1 22C -0.29 >More info -0.51 >More info Col-0 22C Original data GEO bulk
283 21h-DC3000 avrRpm1 0.23 >More info 0.57 >More info 21h-DC3000 leaves Original data GEO bulk
284 control leaf (cmt 5d) -0.21 >More info -0.58 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
285 Laer pretreat JA Flg22 2h -0.53 >More info -0.25 >More info Laer pretreat water control leaf discs Original data GEO bulk
286 miR393 flg22 2h -0.28 >More info -0.50 >More info WT 0h Leaf tissue Original data GEO bulk
287 frb1 mutant -0.26 >More info -0.52 >More info WT whole seedling Original data GEO bulk
288 C24 ozone -0.50 >More info -0.27 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
289 etiolated cop1 0.73 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
290 root - 08% oxygen - 48h 0.23 >More info 0.54 >More info root - 21% oxygen - 48h Original data GEO bulk
291 rosette leaves fdh -0.24 >More info -0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
292 35S::ERF104 H2O 4h 0.52 >More info 0.24 >More info Col-0 H2O 4h Original data GEO bulk
293 Differentiation 48h -0.54 >More info -0.22 >More info Differentiation 0h leaves Original data
294 atr zebularine -0.52 >More info -0.24 >More info WT zebularine shoot apical meristem Original data
295 root hypoxia pSHR 0.26 >More info 0.50 >More info root hypoxia total hypoxia root Original data GEO bulk
296 8h-DC3000 hrpA -0.25 >More info -0.51 >More info 8h-DC3000 leaves Original data GEO bulk
297 ulp1c ulp1d -0.25 >More info -0.51 >More info col Original data GEO bulk
298 MPK6 ox Shoot Hypoxia -0.03 >More info 0.79 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
299 Elevated CO2 AMPLE N NIGHT -0.26 >More info -0.50 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
300 sfr3 cold -0.62 >More info -0.13 >More info WT-cold aerial tissues Original data GEO bulk
301 Col-0 wt Hypoxic 0.19 >More info 0.56 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
302 S15-118 -0.25 >More info -0.50 >More info wt Original data GEO bulk
303 Rosette leaf No2 0.50 >More info 0.24 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
304 cat2-2; 8h switch to ambient CO2 concentrations; -0.21 >More info -0.53 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
305 bbx24 in Simulated Shade -0.18 >More info -0.55 >More info WT in simulated shade shade seedling Original data
306 Laer pretreat JA Flg22 1h -0.51 >More info -0.21 >More info Laer pretreat water control leaf discs Original data GEO bulk
307 Root GLU1-KO 0.20 >More info 0.52 >More info Root Col(0) roots Original data GEO bulk
308 pab polysome -0.03 >More info -0.67 >More info WT polysome seedling shoot/aerial seedling Original data
309 -Sulfate 2 h -0.14 >More info -0.55 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
310 GO5; 8h switch to ambient CO2 concentrations; -0.17 >More info -0.52 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
311 nhx5-2/nhx6 -0.19 >More info -0.50 >More info WT Rosette leaf Original data GEO bulk
312 P. infestans 6 h (leaf) -0.53 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
313 roottip hypoxia pSHR 0.15 >More info 0.53 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
314 hai1-2 low water potential -0.15 >More info -0.53 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
315 WT H2O2 3h -0.12 >More info -0.56 >More info WT water 3h 3h_H2O2 Original data GEO bulk
316 Col PSTDC3000 24h -0.54 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
317 cngc19 -0.53 >More info -0.14 >More info Col-0 root Original data GEO bulk
318 phosphate-starved -0.12 >More info -0.55 >More info control shoot tissue Original data GEO bulk
319 ACN1-2 Sucrose 0.12 >More info 0.54 >More info Col-7 Sucrose Original data GEO bulk
320 Elevated CO2 expanding leaf -0.10 >More info -0.56 >More info Ambient CO2 expanding leaf expanding leaf Original data
321 light 0.83 >More info -0.18 >More info dark light seedling Original data GEO bulk
322 Differentiation 36h -0.51 >More info -0.13 >More info Differentiation 0h leaves Original data
323 root - 01% oxygen - 30min 0.14 >More info 0.50 >More info root - 21% oxygen - 30min Original data GEO bulk
324 cpctry 0.06 >More info 0.57 >More info Col Original data GEO bulk
325 Shoot submergence 7h -0.62 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
326 penta Flg22 1h -0.54 >More info -0.07 >More info Laer Flg22 1h leaf discs Original data GEO bulk
327 Dark 2day ivd -0.59 >More info -0.01 >More info 0h ivd Original data
328 IAA7mII over-expressor IAA Treated -0.10 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
329 Laer pretreat JA Flg22 0h -0.08 >More info -0.51 >More info Laer pretreat water control leaf discs Original data GEO bulk
330 sex1-3 -0.00 >More info -0.59 >More info Col-WT leaves Original data GEO bulk
331 PNO8 12 h -0.08 >More info -0.50 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
332 CCA1-ox 6am non-polysomal 0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
333 HairpinZ 4 h (leaf) -0.53 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
334 Blue Light 45 min -0.00 >More info -0.56 >More info White Light 45min Original data Light treatments
335 seedling 3h after HZE WT -0.56 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
336 WT NAA 1h -0.04 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
337 bZIP1ko mutant N-Light+ 0.55 >More info -0.04 >More info WT-sib N-Light+ whole plant Original data GEO bulk
338 IAA 0.5 h 0.01 >More info 0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
339 piffq 2d WL 0.02 >More info -0.53 >More info WT 2d WL whole seedling Original data GEO bulk
340 Heat shock optimum -0.15 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
341 ABI3GR +DEX +CHX 0.01 >More info -0.51 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
342 siliques AtHb1 control -0.26 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
343 Col BTH -0.43 >More info 0.67 >More info Col rosettes Original data GEO bulk
344 Laer pretreat GA Flg22 1h -0.60 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
345 Leafminer damaged seedlings -0.50 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
346 Col0-PsmES4326-24hpi -0.62 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk