4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on hrpA fliC 7h
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List of experiments correlated with "hrpA fliC 7h"  Help Download transcriptome of top 30
Score Experiment Correlation from
hrpA fliC 7h		 Correlation to
hrpA fliC 7h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 hrpA fliC 7h 1.00 >More info 1.00 >More info Mock 7h hrpA fliC Original data GEO bulk
2 hrpA 7h 0.92 >More info 0.93 >More info Mock 7h hrpA Original data GEO bulk
3 E.coli TUV86 2 fliC 7h 0.90 >More info 0.89 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
4 E.coli 0157 H7 7h 0.89 >More info 0.88 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
5 col-5 hrpA 12h 0.84 >More info 0.88 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
6 hrcC 0.83 >More info 0.88 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
7 GST NPP1 4 h (leaf) 0.86 >More info 0.84 >More info Mock 4 h (leaf) Original data Elicitor treatments
8 Flagellin 4 h (leaf) 0.83 >More info 0.84 >More info Mock 4 h (leaf) Original data Elicitor treatments
9 35S::ERF104 Flg22 4h 0.80 >More info 0.85 >More info 35S::ERF104 H2O 4h Original data GEO bulk
10 WT 2-4h Xanthomonas 0.79 >More info 0.85 >More info WT T0 Original data GEO bulk
11 col-5 DC3000 4h 0.79 >More info 0.83 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
12 mpk6-ko Flg22 4h 0.76 >More info 0.85 >More info mpk6-ko H2O 4h Original data GEO bulk
13 col-5 DC3000 12h 0.79 >More info 0.82 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
14 col-5 hrpA 4h 0.82 >More info 0.78 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
15 Col-0 9 hpi A. brassicicola 0.81 >More info 0.79 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
16 WT flg22 2h 0.79 >More info 0.80 >More info WT 0h Leaf tissue Original data GEO bulk
17 GST 4 h (leaf) 0.72 >More info 0.87 >More info Mock 4 h (leaf) Original data Elicitor treatments
18 WT +elf18 2h 0.85 >More info 0.73 >More info WT untreated elf18 Original data GEO bulk
19 DC3000 2 h (leaf) 0.75 >More info 0.83 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
20 col-5 hrpA 2h 0.75 >More info 0.83 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
21 ataf1-1 mutant Col-0 Bgh inoculated 0.77 >More info 0.81 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
22 anac017-2 AntimycinA 3h -0.79 >More info -0.78 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
23 efr-1 +elf18 10h -0.81 >More info -0.76 >More info WT +elf18 10h elf18 Original data GEO bulk
24 Phaseolicola 2 h (leaf) 0.74 >More info 0.83 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
25 pepr1-1 Pepr2-3 +Pep2 2h -0.80 >More info -0.76 >More info WT +Pep2 2h Pep2 Original data GEO bulk
26 HopZ1a treated 0.76 >More info 0.80 >More info col Original data GEO bulk
27 seedlings protease IV 0.79 >More info 0.76 >More info seedlings nontreated control whole seedling Original data
28 tunicamycin -0.81 >More info -0.74 >More info DMF Original data GEO bulk
29 WT Col-0 Bgh inoculated 0.75 >More info 0.80 >More info WT Col-0 Un-inoculated Original data GEO bulk
30 Lipopolysaccaride4 h (leaf) 0.75 >More info 0.80 >More info Mock 4 h (leaf) Original data Elicitor treatments
31 ulp1c ulp1d +Pto 0.76 >More info 0.78 >More info ulp1c ulp1d mock Original data GEO bulk
32 Cor hrpS 10h 0.79 >More info 0.75 >More info Mock 10h Cor hrpS Original data GEO bulk
33 pvip1 pvip2 0.81 >More info 0.73 >More info Col-0 whole rosettes Original data GEO bulk
34 Col-0 Flg22 4h 0.72 >More info 0.81 >More info Col-0 H2O 4h Original data GEO bulk
35 HopZ1a treated ulp1c ulp1d 0.75 >More info 0.78 >More info col Original data GEO bulk
36 erf104-ko Flg22 4h 0.72 >More info 0.81 >More info erf104-ko H2O 4h Original data GEO bulk
37 col-5 DC3000-avrRpm 4h 0.76 >More info 0.77 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
38 DC3000 hrcC 2 h (leaf) 0.75 >More info 0.78 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
39 miR393 flg22 2h 0.77 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
40 Laer Flg22 2h 0.76 >More info 0.76 >More info Laer Control leaf discs Original data GEO bulk
41 sid2-2 9 hpi A. brassicicola 0.80 >More info 0.72 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
42 AvrRpt2 Col-0 6hpi 0.78 >More info 0.73 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
43 ein2-1 9 hpi A. brassicicola 0.78 >More info 0.73 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
44 IRP1-OE-Fe--shoot 0.81 >More info 0.70 >More info COL-0-Fe--shoot shoot Original data
45 IMI 4mM 0.72 >More info 0.79 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
46 flu over-tAPX 0.72 >More info 0.79 >More info WT Col Original data GEO bulk
47 Col-0-avrB-6h 0.69 >More info 0.82 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
48 Laer Flg22 1h 0.74 >More info 0.75 >More info Laer Control leaf discs Original data GEO bulk
49 Botrytis cinerea 48h 0.72 >More info 0.77 >More info control 48h Original data GEO bulk
50 35S:RPS4 eds1-2 8h -0.75 >More info -0.74 >More info 35S:RPS4 8h leaves Original data
51 WT NAA/flg 2h 0.78 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
52 AvrRpm1 2 h (leaf) 0.66 >More info 0.81 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
53 Seedling KUA1-IOX est 0.72 >More info 0.75 >More info Seedling KUA1-IOX mock Original data
54 AFB1 flg22 2h 0.77 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
55 Col whole leaf 7dpi 0.70 >More info 0.77 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
56 WT-NOCO2 INFECTED 0.78 >More info 0.69 >More info WT-MOCK Original data GEO bulk
57 WT flg22 1h 0.74 >More info 0.72 >More info WT 0h Leaf tissue Original data GEO bulk
58 Laer treat paclobutrazol (PAC) 0.68 >More info 0.77 >More info Laer Control leaf discs Original data GEO bulk
59 msh1 albino 0.73 >More info 0.72 >More info WT aerial part Original data GEO bulk
60 miR393 flg22 1h 0.73 >More info 0.72 >More info WT 0h Leaf tissue Original data GEO bulk
61 miR393 0h -0.69 >More info -0.76 >More info WT 0h Leaf tissue Original data GEO bulk
62 flu 0.68 >More info 0.76 >More info WT Col Original data GEO bulk
63 gpa1 -ABA GC -0.76 >More info -0.68 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
64 Pto inoculated 0.73 >More info 0.71 >More info col Original data GEO bulk
65 Laer Flg22+GA 1h 0.73 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
66 dde2-2 9 hpi A. brassicicola 0.79 >More info 0.64 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
67 WT NAA/flg 1h 0.75 >More info 0.68 >More info WT 0h Leaf tissue Original data GEO bulk
68 Leafminer locally damaged thaliana seedlings 0.73 >More info 0.70 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
69 Laer Flg22+GA 2h 0.72 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
70 mkk1/mkk2 24h BTH rep 0.72 >More info 0.71 >More info Col-0 24h BTH rep Original data GEO bulk
71 WT+chitooctaose 0.72 >More info 0.71 >More info WT+water chitooctaose seedlings Original data GEO bulk
72 AFB1 flg22 1h 0.73 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
73 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.78 >More info 0.64 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
74 WT Bc inoculation 14h 0.78 >More info 0.64 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
75 WT +elf18 10h 0.79 >More info 0.63 >More info WT untreated elf18 Original data GEO bulk
76 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.79 >More info 0.63 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
77 Col ozone 3h 0.60 >More info 0.82 >More info Col clean-air 3h ozone Original data GEO bulk
78 safener treated 0.72 >More info 0.70 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
79 seedlings-week-old RECA1-overexpressing
transgenic		 0.68 >More info 0.74 >More info seedlings-week-old Col-0 seedlings Original data
80 coi1-16 ein2 sid2 ctrl -0.78 >More info -0.64 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
81 ASL9-ox -0.74 >More info -0.68 >More info WT aerial parts of seedlings Original data GEO bulk
82 Col-0 ozone 0.78 >More info 0.63 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
83 DFPM 0.67 >More info 0.74 >More info control Original data GEO bulk
84 P.p 2.5hai 0.71 >More info 0.70 >More info At-Control roots Original data GEO bulk
85 Te ozone 0.75 >More info 0.65 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
86 Col-Luc WT 3h antimycin A 0.71 >More info 0.69 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
87 SLWF infested 0.64 >More info 0.76 >More info SLWF uninfested rosette tissue Original data GEO bulk
88 Laer pretreat GA Flg22 1h 0.68 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
89 pmr5 pmr6 0.65 >More info 0.74 >More info Col-0 Original data GEO bulk
90 Col leaves 48h LT 0.71 >More info 0.68 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
91 agb1 gpa1 -ABA GC -0.74 >More info -0.65 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
92 CMP 24hr 0.67 >More info 0.72 >More info Acetone 24hr root Original data GEO bulk
93 anac017-1 H2O2 3h -0.82 >More info -0.57 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
94 CMP 4hr 0.69 >More info 0.70 >More info Acetone 4hr root Original data GEO bulk
95 oligomycin 4 h 0.70 >More info 0.68 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
96 Rsch 3d 0.76 >More info 0.62 >More info Rsch CA Leaves Original data
97 bio4-1 mutant watered00µM biotin leaves -0.60 >More info -0.78 >More info bio4-1 mutant leaves leaves Original data GEO bulk
98 bio4-1 mutant leaves 0.61 >More info 0.77 >More info WT leaves leaves Original data GEO bulk
99 Col 3d 0.76 >More info 0.62 >More info Col CA Leaves Original data
100 PAHs stress 0.73 >More info 0.65 >More info exp control phenanthrene whole plants Original data GEO bulk
101 SA 4mM 0.62 >More info 0.76 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
102 del1-1 mutant 5d uninfected 0.67 >More info 0.70 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
103 rosette Dark Wounded 0.65 >More info 0.72 >More info rosette Dark Control Original data GEO bulk
104 CMV-WT 0.70 >More info 0.67 >More info Mock-At Aerial tissues Original data GEO bulk
105 pnp1-1 3h +P 0.71 >More info 0.66 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
106 Fenclorim 4hr 0.63 >More info 0.74 >More info Acetone 4hr root Original data GEO bulk
107 Col0-PsmES4326-24hpi 0.76 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
108 penta Alternaria 3dpi 0.69 >More info 0.68 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
109 B.cinerea 18 h infection 0.64 >More info 0.73 >More info Mock 18 h Original data Botrytis cinerea infection
110 Botrytis cinerea 18h 0.64 >More info 0.73 >More info control 18h Original data GEO bulk
111 wrky33 Bc inoculation 14h 0.77 >More info 0.59 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
112 CT101 ozone 0.74 >More info 0.62 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
113 Nicotinamide-69hr 0.75 >More info 0.61 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
114 atmyc2 Seedling BL -0.60 >More info -0.75 >More info WT Seedling BL Original data GEO bulk
115 DC3000 7h 0.56 >More info 0.79 >More info Mock 7h DC3000 Original data GEO bulk
116 AgNO3 3 h 0.66 >More info 0.69 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
117 WT AntimycinA 3h 0.66 >More info 0.69 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
118 chito-octamer 0.66 >More info 0.68 >More info Col Mock Original data GEO bulk
119 Sulfometuron EC50 0.67 >More info 0.67 >More info Carrier Original data GEO bulk
120 Laer Alternaria 3dpi -0.65 >More info -0.69 >More info Laer Control leaf discs Original data GEO bulk
121 ice1 24H Cold 0.69 >More info 0.65 >More info WT 24H Cold Original data GEO bulk
122 S58-2 0.61 >More info 0.73 >More info wt Original data GEO bulk
123 CeO2 germinant -0.62 >More info -0.72 >More info Millipore Water germinant CeO2 seedling Original data
124 chito-tetramer 0.66 >More info 0.67 >More info Col Mock Original data GEO bulk
125 Dex-rga(delta17) 4h GA4+DEX -0.70 >More info -0.63 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
126 cat2-2; 8h switch to ambient CO2 concentrations; 0.72 >More info 0.61 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
127 Pst-DC3000(avrRpm1)-4hpi 0.52 >More info 0.81 >More info Pst-DC3000-4hpi Original data GEO bulk
128 smg7b-1 0.67 >More info 0.66 >More info WT whole plant Original data GEO bulk
129 gh3.5-1D 48 hpi 0.61 >More info 0.72 >More info Col-0 uninoculated Original data GEO bulk
130 C24 ozone 0.74 >More info 0.59 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
131 coi1-16 ein2 sid2 ozone 0.75 >More info 0.58 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
132 npr1-1 SA -0.66 >More info -0.66 >More info Col-0 SA complete seedling Original data
133 coi1-2 0.66 >More info 0.66 >More info Col-0 mock Whole seedling Original data GEO bulk
134 Nicotinamide-73hr 0.76 >More info 0.56 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
135 Nicotinamide-85hr 0.70 >More info 0.62 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
136 Cycloheximide 3 h 0.69 >More info 0.63 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
137 aerial organ callus inducing medium 48 h 0.72 >More info 0.60 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
138 Col-0 C2H4 24h 0.58 >More info 0.74 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
139 LTN008-2 aza-dc 0.74 >More info 0.57 >More info LTN012-2 Mock Original data
140 gun1gun5 far-red pretreated -0.65 >More info -0.66 >More info WT far-red pretreated Original data GEO bulk
141 WT roots - Fe 0.69 >More info 0.62 >More info WT roots + Fe Roots Original data GEO bulk
142 Col whole leaf 5dpi 0.52 >More info 0.79 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
143 pepr1-1 Pepr2-3 +Pep2 10h -0.64 >More info -0.66 >More info WT +Pep2 10h Pep2 Original data GEO bulk
144 mkk1/mkk2 control rep 0.66 >More info 0.64 >More info Col-0 Time 0 rep Original data GEO bulk
145 camta1/2/3 warm 0.69 >More info 0.61 >More info WT warm entire aerial part Original data GEO bulk
146 ice1 control 0.50 >More info 0.79 >More info WT control Original data GEO bulk
147 Leafminer damaged seedlings 0.73 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
148 pad4-PsmES4326-24hpi -0.60 >More info -0.69 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
149 Nicotinamide-93hr 0.75 >More info 0.54 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
150 Stem tissue 5 days NAA 0.68 >More info 0.61 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
151 camta1/2/3 24h cold 0.70 >More info 0.59 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
152 edr1 36 h powdery mildew 0.66 >More info 0.63 >More info Col-0 36 h powdery mildew Original data GEO bulk
153 Wounding Stress3 h (shoot) 0.63 >More info 0.66 >More info Stress mock 3 h (shoot) Original data Stress treatments
154 rosette Light Wounded 0.60 >More info 0.68 >More info rosette Light Control Original data GEO bulk
155 aerial organ callus inducing medium 24h 0.73 >More info 0.55 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
156 CLO 4mM 0.70 >More info 0.58 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
157 Nicotinamide-53hr 0.71 >More info 0.57 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
158 ice1 6H Cold 0.53 >More info 0.74 >More info WT 6H Cold Original data GEO bulk
159 35S:RPS4 eds1-2 24h -0.55 >More info -0.72 >More info 35S:RPS4 24h leaves Original data
160 WT-SA 0.57 >More info 0.70 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
161 AsAKiin11 T2 0.58 >More info 0.69 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
162 +1.6 mM Tween 20 1 h. 0.63 >More info 0.64 >More info +distilled water 1 h. Original data GEO bulk
163 aerial organ callus inducing medium 96 h 0.61 >More info 0.66 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
164 Col-0 V. longisporum-inoculated 48 hpi 0.60 >More info 0.66 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
165 S15-118 0.58 >More info 0.68 >More info wt Original data GEO bulk
166 Mutant gh3.5-1D (AvrRpt2) 0.48 >More info 0.78 >More info Col-0 (AvrRpt2) Original data GEO bulk
167 cpr5scv1 0.62 >More info 0.63 >More info WT(COL) Original data GEO bulk
168 bak1-3 +Pep2 10h 0.54 >More info 0.71 >More info WT +Pep2 10h Pep2 Original data GEO bulk
169 pnp1-1 1wk +P 0.71 >More info 0.54 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
170 mkk2 24h BTH rep 0.58 >More info 0.66 >More info Col-0 24h BTH rep Original data GEO bulk
171 aerial organ callus inducing medium 12 h 0.66 >More info 0.58 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
172 ice1 3H Cold 0.60 >More info 0.64 >More info WT 3H Cold Original data GEO bulk
173 Mature callus 0.62 >More info 0.62 >More info Young callus hypocotyls Original data GEO bulk
174 gai Control 0.69 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
175 WT 90-105 min Xanthomonas 0.61 >More info 0.63 >More info WT T0 Original data GEO bulk
176 Chitosan 3h Treatment 0.63 >More info 0.61 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
177 WT-elf18 0.66 >More info 0.57 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
178 cpr5 0.65 >More info 0.58 >More info WT(COL) Original data GEO bulk
179 Infected pft1 leaf 0.72 >More info 0.51 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
180 Te 1d 0.74 >More info 0.49 >More info Te CA Leaves Original data
181 UV 0.62 >More info 0.61 >More info WT aerial region Original data GEO bulk
182 phr1 phl1 Root-Pi 0.64 >More info 0.59 >More info WT Shoot+Pi roots Original data GEO bulk
183 Cor 10h 0.52 >More info 0.71 >More info Mock 10h Cor Original data GEO bulk
184 1 h Light IP RNA -0.54 >More info -0.68 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
185 P.p 6hai 0.60 >More info 0.62 >More info At-Control roots Original data GEO bulk
186 P.p 10.5hai 0.58 >More info 0.64 >More info At-Control roots Original data GEO bulk
187 Dex-rga(delta17) 2h GA4+DEX -0.65 >More info -0.57 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
188 Nicotinamide-89hr 0.69 >More info 0.53 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
189 ARR22-ox (t-zeatin 3 h) 0.60 >More info 0.62 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
190 AtLysM RLK1 mutant chitooctaose -0.69 >More info -0.52 >More info WT chitooctaose Original data GEO bulk
191 Col-0 low oxygen 0.62 >More info 0.59 >More info Col-0 Original data GEO bulk
192 Nicotinamide-65hr 0.71 >More info 0.50 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
193 ceh1 mutant 0.56 >More info 0.64 >More info Parent line Original data
194 cpr5npr1svi1 0.55 >More info 0.65 >More info WT(COL) Original data GEO bulk
195 cs26 long day 0.56 >More info 0.64 >More info Leaves-WT-LD leaf Original data GEO bulk
196 Nicotinamide-57hr 0.64 >More info 0.56 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
197 Nicotinamide-81hr 0.69 >More info 0.51 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
198 Laer pretreat GA+JA Flg22 0h 0.60 >More info 0.59 >More info Laer pretreat water control leaf discs Original data GEO bulk
199 Laer pretreat GA Flg22 0h 0.67 >More info 0.52 >More info Laer pretreat water control leaf discs Original data GEO bulk
200 WT powdery mildew 0.61 >More info 0.58 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
201 IRP1-OE-Ctrl--root 0.62 >More info 0.57 >More info COL-0-Ctrl--root root Original data
202 P.syringae AvrRpt2 4 h (leaf) 0.50 >More info 0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
203 petiole in D 0.55 >More info 0.64 >More info petiole in WL petioles Original data GEO bulk
204 rosette leaves fdh 0.66 >More info 0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
205 Shoot -Cs 0.38 >More info 0.80 >More info Control-shoot Original data GEO bulk
206 Rsch 1d 0.60 >More info 0.58 >More info Rsch CA Leaves Original data
207 Light 3day wt -0.73 >More info -0.45 >More info 0h wt Original data
208 anac017-2 H2O2 3h -0.76 >More info -0.42 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
209 Shoot -K 0.61 >More info 0.57 >More info Control-shoot Original data GEO bulk
210 K starvation (shoot) 0.61 >More info 0.57 >More info Ws (shoot) Original data GEO bulk
211 vte2-1 3d vernalization 0.60 >More info 0.57 >More info WT 3d vernalization Original data GEO bulk
212 Cor 24h 0.67 >More info 0.50 >More info Mock 24h Cor Original data GEO bulk
213 Leafminer systemically damaged thaliana seedlings 0.62 >More info 0.55 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
214 Dex-rga(delta17) 4h GA4 -0.65 >More info -0.51 >More info Vector 4h GA4 shoots Original data GEO bulk
215 pho1 0.51 >More info 0.65 >More info Col2WT Original data GEO bulk
216 SCR-GR Time 1H Dex 0.68 >More info 0.48 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
217 OH1 0.60 >More info 0.56 >More info Col-0 leaves Original data GEO bulk
218 sfr2 control -0.65 >More info -0.51 >More info WT control All aerial tissue Original data GEO bulk
219 wavy 0.72 >More info 0.44 >More info WT Original data GEO bulk
220 WT +Pep2 2h 0.80 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
221 lht1 PstDC3000 48h 0.55 >More info 0.60 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
222 WT chitooctaose 0.64 >More info 0.51 >More info WT water Original data GEO bulk
223 csn5 (csn5a-2 csn5b) light 0.64 >More info 0.51 >More info WT light Original data GEO bulk
224 GO5; 0h switch to ambient CO2 concentrations; -0.74 >More info -0.40 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
225 shoots bhlh100/101 0uM Fe 0.54 >More info 0.60 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
226 low CO2 + light 0.60 >More info 0.54 >More info normal CO2 + light Original data GEO bulk
227 npr1-PsmES4326-24hpi -0.63 >More info -0.51 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
228 Mutant siz1-3 0.61 >More info 0.52 >More info Col-0 Original data GEO bulk
229 ACC 3 h 0.61 >More info 0.52 >More info Mock 3 h Original data Basic hormone treatment of seedlings
230 siz1-3 control 0.61 >More info 0.52 >More info Col-0 control Original data GEO bulk
231 IRP1-OE-Ctrl--shoot 0.70 >More info 0.43 >More info COL-0-Ctrl--shoot shoot Original data
232 Fenclorim 24hr 0.47 >More info 0.66 >More info Acetone 24hr root Original data GEO bulk
233 Te 3d 0.62 >More info 0.50 >More info Te CA Leaves Original data
234 CAX1/CAX3 mutant 0.60 >More info 0.52 >More info Col whole plant Original data GEO bulk
235 WT no Pi 0.64 >More info 0.48 >More info WT complete seedlings Original data
236 4d red light grown hmr-5 seedlings 0.61 >More info 0.51 >More info 4d red light grown WT(Col-0) seedlings Original data
237 edr1 18 h powdery mildew 0.53 >More info 0.59 >More info Col-0 18 h powdery mildew Original data GEO bulk
238 CMV-A2b mutant 0.48 >More info 0.64 >More info Mock-At Aerial tissues Original data GEO bulk
239 leaf13 0.49 >More info 0.63 >More info unwounded leaves none Original data GEO bulk
240 WT resupplied Pi 4h 0.69 >More info 0.43 >More info WT complete seedlings Original data
241 cpr5 0.55 >More info 0.56 >More info WT seedling Original data GEO bulk
242 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.78 >More info -0.33 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
243 Laer pretreat GA+JA Flg22 1h 0.60 >More info 0.51 >More info Laer pretreat water control leaf discs Original data GEO bulk
244 mil4 BTH 0.51 >More info 0.60 >More info Col BTH rosettes Original data GEO bulk
245 npr1-1 water -0.73 >More info -0.38 >More info Col-0 water complete seedling Original data
246 shoots bhlh100/101 100uM Fe 0.53 >More info 0.58 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
247 protoplasts T2 [flg22] 0.56 >More info 0.54 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
248 short 14-degree- 0.54 >More info 0.56 >More info control short Original data GEO bulk
249 gpa1 +ABA GC -0.57 >More info -0.53 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
250 Mutant siz1-3 (Drought) 0.49 >More info 0.61 >More info Col-0 (Drought) Original data GEO bulk
251 WT 3h -P 0.44 >More info 0.66 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
252 bZIP1ko mutant N+Light- 0.40 >More info 0.70 >More info WT-sib N+Light- whole plant Original data GEO bulk
253 siz1-3 drought 0.49 >More info 0.61 >More info Col-0 drought Original data GEO bulk
254 Col-0 under 4 days salt 0.39 >More info 0.71 >More info Col-0 under control 4 days salt treatment rosette Original data
255 Elevated CO2 fully expanded leaf 0.47 >More info 0.63 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
256 Laer MeJA 1h -0.63 >More info -0.46 >More info Laer Control leaf discs Original data GEO bulk
257 pmr5 0.42 >More info 0.67 >More info Col-0 Original data GEO bulk
258 penta Control 0.57 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
259 D2O 0.69 >More info 0.40 >More info H2O seedling Original data GEO bulk
260 ERF96OE 0.38 >More info 0.71 >More info WT leaf Original data
261 9 hr Hypoxia IP RNA 0.62 >More info 0.46 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
262 Laer pretreat GA Flg22 2h 0.67 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
263 agb1 gpa1 +ABA GC -0.57 >More info -0.51 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
264 35S-MIF1 dark grown 0.65 >More info 0.43 >More info Dark-grown WT control Original data GEO bulk
265 sid2-1 cold -0.59 >More info -0.49 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
266 Osmotic Stress 24 h (shoot) 0.47 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
267 Col BTH 0.41 >More info 0.67 >More info Col rosettes Original data GEO bulk
268 Elevated CO2 AMPLE N NIGHT 0.40 >More info 0.68 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
269 short 8-degree- 0.64 >More info 0.43 >More info control short Original data GEO bulk
270 Glyphosate EC50 0.54 >More info 0.53 >More info Carrier (Glyphosate) Original data GEO bulk
271 TNT-seedlings 0.51 >More info 0.56 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
272 current injection 0.39 >More info 0.68 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
273 Laer pretreat JA Flg22 1h 0.60 >More info 0.47 >More info Laer pretreat water control leaf discs Original data GEO bulk
274 Col upon hypoxia 6 hrs 0.69 >More info 0.38 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
275 scrm-D 0.57 >More info 0.50 >More info Col-0 WT whole seedling Original data GEO bulk
276 rcf1-1 cold 12h 0.58 >More info 0.49 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
277 aba3-1 0.49 >More info 0.58 >More info wt Original data GEO bulk
278 short 10-degree- 0.64 >More info 0.42 >More info control short Original data GEO bulk
279 irradiated leaf (WT 1d) 0.65 >More info 0.41 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
280 sav1-1 light 0.59 >More info 0.47 >More info Col-0 light seedlings Original data GEO bulk
281 35S:RPS4 eds1-2 2h -0.55 >More info -0.51 >More info 35S:RPS4 2h leaves Original data
282 Shoot submergence 24h 0.51 >More info 0.55 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
283 Col-0 SA 0.55 >More info 0.51 >More info Col-0 Original data GEO bulk
284 sav1-1 shade 0.57 >More info 0.49 >More info Col-0 shade seedlings Original data GEO bulk
285 Laer pretreat GA+JA Flg22 2h 0.53 >More info 0.53 >More info Laer pretreat water control leaf discs Original data GEO bulk
286 gpa1-4/agb1-2 ozone 2d -0.47 >More info -0.59 >More info Col ozone 2d ozone Original data GEO bulk
287 WT+H2O2 0.40 >More info 0.66 >More info WT H2O2 Original data GEO bulk
288 Col-0 flu HL 3h 0.42 >More info 0.64 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
289 Nicotinamide-77hr 0.56 >More info 0.49 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
290 toc1-1-49hr 0.50 >More info 0.55 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
291 Mutant arf2-6 -0.65 >More info -0.40 >More info Col Original data GEO bulk
292 Aerobic prt6 0.63 >More info 0.42 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
293 Laer pretreat JA Flg22 2h 0.65 >More info 0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
294 PNO8 3 h 0.44 >More info 0.61 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
295 AZC 0.70 >More info 0.35 >More info noneHS Original data GEO bulk
296 Chitin 0.64 >More info 0.40 >More info Col C Original data GEO bulk
297 dark +H2O2 -0.56 >More info -0.48 >More info dark 5 mM H2O2 seedling Original data GEO bulk
298 ACC 1 h 0.55 >More info 0.49 >More info Mock 1 h Original data Basic hormone treatment of seedlings
299 Col ozone 2d 0.36 >More info 0.68 >More info Col clean-air 2d ozone Original data GEO bulk
300 DC3000 24h 0.39 >More info 0.65 >More info Mock 24h DC3000 Original data GEO bulk
301 TiO2 germinant -0.64 >More info -0.39 >More info Millipore Water germinant TiO2 seedling Original data
302 camta2/3 warm 0.51 >More info 0.52 >More info WT warm entire aerial part Original data GEO bulk
303 Nicotinamide-61hr 0.66 >More info 0.37 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
304 20d after anthesis 0.52 >More info 0.51 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
305 gun1-1 +lincomycin -0.54 >More info -0.49 >More info Col-0 +lincomycin Original data GEO bulk
306 downy mildew cotyledons late stage 0.56 >More info 0.47 >More info mock inoculated Cotyledons Original data GEO bulk
307 plant (tga2-5-6) 4h phytoprostane A1 0.65 >More info 0.38 >More info plant (tga2-5-6) 4h control Original data GEO bulk
308 35S:RPS4 rrs1-11 8h -0.54 >More info -0.49 >More info 35S:RPS4 8h leaves Original data
309 eds16 whole leaf 5dpi -0.38 >More info -0.65 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
310 Col whole leaf amplified 5 dpi 0.44 >More info 0.59 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
311 leaf blade in D 0.36 >More info 0.67 >More info leaf blade in WL leaf blades Original data GEO bulk
312 P.p 30hai 0.38 >More info 0.65 >More info At-Control roots Original data GEO bulk
313 ani1 T0.5 -0.47 >More info -0.56 >More info WT T0.5 root tissue Original data GEO bulk
314 cat2-hCO2 -0.51 >More info -0.51 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
315 9m.KNO3 0.50 >More info 0.52 >More info To. KNO3 14 day old Roots Original data GEO bulk
316 Root GLU1-KO -0.55 >More info -0.47 >More info Root Col(0) roots Original data GEO bulk
317 arf2 brz -0.51 >More info -0.51 >More info arf2 mock Original data GEO bulk
318 Bur-0-1h IAA 0.68 >More info 0.34 >More info Bur-0h IAA whole plant Original data GEO bulk
319 Stem tissue 2 days NAA 0.46 >More info 0.56 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
320 PBZ 0.48 >More info 0.54 >More info none PBZ Rosette Original data GEO bulk
321 msh1 stunt 0.48 >More info 0.54 >More info WT Col-0 above ground part of plant Original data GEO bulk
322 GSH 0.40 >More info 0.62 >More info control GSH treated seedlings Original data GEO bulk
323 treated group 0.49 >More info 0.53 >More info Control group Original data
324 aox1a(line) MLD stressed 0.38 >More info 0.64 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
325 Nicotinamide-49hr 0.60 >More info 0.41 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
326 Col-0 INA 6d 0.59 >More info 0.42 >More info Col-0 MOCK 6d Original data GEO bulk
327 Laer Pst DC3000 12hpi -0.59 >More info -0.42 >More info Laer Control leaf discs Original data GEO bulk
328 Rsch 8h 0.45 >More info 0.56 >More info Rsch CA Leaves Original data
329 tumour 0.55 >More info 0.45 >More info non-tumor tumour Original data GEO bulk
330 dor drought 0.40 >More info 0.60 >More info WT drought Original data GEO bulk
331 ataf1-1 mutant Col-0 Un-inoculated -0.43 >More info -0.57 >More info WT Col-0 Un-inoculated Original data GEO bulk
332 WT 1wk -P 0.41 >More info 0.59 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
333 JA 0.39 >More info 0.61 >More info Col-0 mock Whole seedling Original data GEO bulk
334 Cambium 5 days NAA 0.47 >More info 0.53 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
335 1 h Light Total RNA -0.39 >More info -0.61 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
336 WT seedlings MV 0.47 >More info 0.53 >More info WT seedlings control Seedlings Original data GEO bulk
337 edr1 0 h powdery mildew 0.56 >More info 0.43 >More info Col-0 0 h powdery mildew Original data GEO bulk
338 bZIP1ko mutant N+Light+ 0.63 >More info 0.36 >More info WT-sib N+Light+ whole plant Original data GEO bulk
339 IRP1-OE-Fe--root 0.55 >More info 0.44 >More info COL-0-Fe--root root Original data
340 Leaf GLU1-KO 0.52 >More info 0.47 >More info Leaf Col(0) rosette leaves Original data GEO bulk
341 WT leaves - Fe 0.53 >More info 0.46 >More info WT leaves + Fe Leaves Original data GEO bulk
342 E.orontii Infection 3 day 0.47 >More info 0.52 >More info Uninfection 3 day Original data Elicitor treatments
343 IAA7mII over-expressor IAA Treated 0.30 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
344 WT in -N 0.46 >More info 0.53 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
345 upf3 0.43 >More info 0.56 >More info WT whole plant Original data GEO bulk
346 8h-DC3000 avrRpm1 0.38 >More info 0.61 >More info 8h-DC3000 leaves Original data GEO bulk
347 35S:VND7-VP16-GR+CHX 0.46 >More info 0.53 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
348 cpr5npr1 0.41 >More info 0.58 >More info WT(COL) Original data GEO bulk
349 Primisulfuron EC50 0.40 >More info 0.59 >More info Carrier (primisulfuron) Original data GEO bulk
350 P35S:rGRF3 0.54 >More info 0.44 >More info WS Original data GEO bulk
351 UV Stress 24 h (shoot) 0.46 >More info 0.52 >More info Stress mock 24 h (shoot) Original data Stress treatments
352 GO5; 8h switch to ambient CO2 concentrations; 0.38 >More info 0.60 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
353 ORS1 induced 0.57 >More info 0.40 >More info mock-induced rosette leaves Original data GEO bulk
354 rcf1-1 cold 24h 0.51 >More info 0.46 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
355 Mutant arf2 (etiol) 0.46 >More info 0.51 >More info Col (etiol) Original data GEO bulk
356 arf2 mock 0.46 >More info 0.51 >More info Col mock Original data GEO bulk
357 Col-0 INA 48h 0.44 >More info 0.53 >More info Col-0 MOCK 48h Original data GEO bulk
358 petiole in FRD 0.45 >More info 0.52 >More info petiole in WL petioles Original data GEO bulk
359 NAA -AA 0.53 >More info 0.43 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
360 Sha-3h IAA 0.71 >More info 0.25 >More info Sha-0h IAA whole plant Original data GEO bulk
361 Cold Stress 24 h (shoot) 0.54 >More info 0.42 >More info Stress mock 24 h (shoot) Original data Stress treatments
362 Col 1d 0.52 >More info 0.44 >More info Col CA Leaves Original data
363 Col laser microdissected 5 dpi 0.36 >More info 0.60 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
364 lht1 untreated 0.38 >More info 0.58 >More info WT untreated untreated leaf Original data GEO bulk
365 upf1 0.39 >More info 0.57 >More info WT whole plant Original data GEO bulk
366 rpoTmp(line) MLD stressed 0.34 >More info 0.62 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
367 albino Ds13-2198-1 -0.56 >More info -0.39 >More info control Original data GEO bulk
368 10min Reillumination IP RNA -0.55 >More info -0.40 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
369 camta3-1 0.52 >More info 0.43 >More info WT Original data GEO bulk
370 Bur-0-3h IAA 0.53 >More info 0.42 >More info Bur-0h IAA whole plant Original data GEO bulk
371 35S-MIF1 light grown 0.58 >More info 0.37 >More info Light-grown WT control Original data GEO bulk
372 C58 35dpi 0.54 >More info 0.41 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
373 vtc1 (II) 0.38 >More info 0.57 >More info Col (II) rosette Original data GEO bulk
374 myb3 myb3r4d 0.35 >More info 0.60 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
375 OE WRKY63.3 high light 0.45 >More info 0.50 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
376 short 12-degree- 0.54 >More info 0.40 >More info control short Original data GEO bulk
377 Truncated AC2 T2 -0.78 >More info -0.16 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
378 FAMA induced 4h -0.38 >More info -0.56 >More info control 4h Whole seedling Original data GEO bulk
379 0.125 mM gold 24 h 0.39 >More info 0.55 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
380 root Dosed gold 0.39 >More info 0.55 >More info root No gold .125 mM gold 24 h roots Original data
381 shoot control pSultr2:2 -0.69 >More info -0.25 >More info shoot control total Original data GEO bulk
382 ani1 T16 -0.61 >More info -0.33 >More info WT T16 root tissue Original data GEO bulk
383 scrm-D:mute 0.51 >More info 0.43 >More info Col-0 WT whole seedling Original data GEO bulk
384 agb1 gpa1 +ABA LF -0.58 >More info -0.36 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
385 Mutant ein2(leaf) -0.34 >More info -0.60 >More info Col-0 (leaf) Original data GEO bulk
386 shoots WT 0uM Fe 0.65 >More info 0.28 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
387 Time-0 chr11-1chr17-1 -0.53 >More info -0.40 >More info Time-0 Col-0 leaf explants Original data
388 Mock pft1 leaf 0.28 >More info 0.65 >More info Mock Col-0 leaf water leaf Original data GEO bulk
389 pnp1-1 1wk -P 0.64 >More info 0.29 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
390 Dark 3day ivd 0.35 >More info 0.58 >More info 0h ivd Original data
391 C58 3hpi 0.43 >More info 0.50 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
392 vtc2 (I) 0.41 >More info 0.52 >More info Col (I) rosette Original data GEO bulk
393 Transgenic LEC2GR Seedling 1h Dex 0.57 >More info 0.35 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
394 Mutant iaa5_6_19(IAA) 0.55 >More info 0.36 >More info Col (IAA) Original data GEO bulk
395 1.5 hr ammonium 0.53 >More info 0.38 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
396 ppi2 0.39 >More info 0.52 >More info WT whole plant Original data GEO bulk
397 fls1-3 0.40 >More info 0.51 >More info Col-0 Rosette leaves Original data
398 oligomycin 1 h 0.41 >More info 0.50 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
399 bHLH122 ox -0.33 >More info -0.58 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
400 tor mutant glucose 0.52 >More info 0.38 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
401 atgsnor1-3-avrB-6h 0.50 >More info 0.40 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
402 R. solani AG2-1 0.39 >More info 0.51 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
403 sta1 0.39 >More info 0.51 >More info WT Original data GEO bulk
404 35S::ZAT12 0.37 >More info 0.53 >More info gl1 Original data GEO bulk
405 Col whole leaf 3dpi 0.31 >More info 0.59 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
406 Triazolopyrimidine EC50 0.33 >More info 0.57 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
407 exo70A1 0.56 >More info 0.33 >More info Col-0 whole plant Original data GEO bulk
408 WT +Pep2 10h 0.56 >More info 0.33 >More info WT untreated Pep2 Original data GEO bulk
409 rao1-1 3h antimycin A -0.52 >More info -0.37 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
410 WT mitomycin C 0.64 >More info 0.25 >More info WT mock shoot apical meristem Original data
411 root control pSHR -0.53 >More info -0.36 >More info root control total control root Original data GEO bulk
412 Dark 6h ivd 0.50 >More info 0.39 >More info 0h ivd Original data
413 entire vegetative rosette -0.73 >More info -0.16 >More info Col-0 Mock WL entire vegetative rosette Original data
414 nNOS-control 0.58 >More info 0.31 >More info WT-control leaf Original data
415 NAA 3h 0.55 >More info 0.33 >More info before treatment NAA root Original data GEO bulk
416 Total RNA csp1 cold 0.52 >More info 0.36 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
417 ws 24h4c q8ws 0.52 >More info 0.36 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
418 GRX-overexpression seedlings control 0.63 >More info 0.25 >More info WT seedlings control Seedlings Original data GEO bulk
419 low water potential 0.52 >More info 0.36 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
420 FILp cells 0.66 >More info 0.22 >More info Protoplast Induced Original data GEO bulk
421 WT light -0.36 >More info -0.52 >More info WT dark Original data GEO bulk
422 Col whole leaf 5 dpi 0.31 >More info 0.57 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
423 AtMYB30-ox 2-4h Xanthomonas 0.56 >More info 0.31 >More info WT 2-4h Xanthomonas Original data GEO bulk
424 MPK6 ox Shoot Hypoxia 0.67 >More info 0.20 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
425 RPL18 TuMV inoculated total RNA 0.32 >More info 0.55 >More info mock inoculated total RNA PO Original data GEO bulk
426 pif3 Dark 0h -0.51 >More info -0.36 >More info WT Dark 0h etiolated seedling Original data GEO bulk
427 IAA 3 h 0.60 >More info 0.27 >More info Mock 3 h Original data Basic hormone treatment of seedlings
428 C24-3h IAA 0.50 >More info 0.37 >More info C24-0h IAA whole plant Original data GEO bulk
429 GST-overexpression seedlings control 0.59 >More info 0.28 >More info WT seedlings control Seedlings Original data
430 cell culture 4 h phytoprostane A1 0.28 >More info 0.59 >More info cell culture 4 h control Original data GEO bulk
431 oas-a1.1 shoot -0.35 >More info -0.52 >More info WT-Untreated Shoot Original data GEO bulk
432 siliques AtHb1 control 0.34 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
433 Root wt CLE10 0.28 >More info 0.58 >More info Root wt CLE25 root tip Original data GEO bulk
434 Differentiation 12h 0.35 >More info 0.51 >More info Differentiation 0h leaves Original data
435 GV3101 6dpi 0.51 >More info 0.34 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
436 vtc1-1 -0.30 >More info -0.55 >More info Col-0 whole plant Original data GEO bulk
437 ABA DFPM 0.25 >More info 0.60 >More info control Original data GEO bulk
438 nia1nia2 0.35 >More info 0.50 >More info Col-0 whole seedlings Original data GEO bulk
439 camta1/3 warm 0.28 >More info 0.57 >More info WT warm entire aerial part Original data GEO bulk
440 sni1 0.25 >More info 0.60 >More info WT Original data GEO bulk
441 Atwrky63 -0.54 >More info -0.30 >More info Col0 none leaf Original data GEO bulk
442 rao1-2 3h antimycin A -0.54 >More info -0.30 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
443 toc1-1-93hr 0.50 >More info 0.34 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
444 arp6-10 12 ºC -0.52 >More info -0.32 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
445 Mutant coi1(leaf) -0.17 >More info -0.67 >More info Col-0 (leaf) Original data GEO bulk
446 abi4-102 (II) 0.29 >More info 0.55 >More info Col (II) rosette Original data GEO bulk
447 spx1 spx2 complete 0.55 >More info 0.28 >More info WT complete seedlings Original data
448 roottip hypoxia total 0.56 >More info 0.27 >More info roottip control total Original data GEO bulk
449 C24 24h cold -0.50 >More info -0.33 >More info Col 24h cold leaf Original data GEO bulk
450 ein5-1 ski2-3 0.31 >More info 0.52 >More info Col-0 aerial tissue Original data
451 eds16 whole leaf 7dpi -0.33 >More info -0.50 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
452 rosettes WT drought 0.32 >More info 0.51 >More info rosettes WT watered Original data GEO bulk
453 RRE2 Chitin 0.31 >More info 0.52 >More info Chitin Original data GEO bulk
454 WT Seedling BL -0.33 >More info -0.50 >More info WT Seedling Dark Original data GEO bulk
455 shoot-10 μM DEX- 6 hr 0.31 >More info 0.52 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
456 RGA-GR-DEX 0.26 >More info 0.57 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
457 ein2-1 +Pep2 2h -0.50 >More info -0.32 >More info WT +Pep2 2h Pep2 Original data GEO bulk
458 short 17-degree- 0.55 >More info 0.27 >More info control short Original data GEO bulk
459 opr3 JA 2 h 0.19 >More info 0.63 >More info opr3 0 h Original data GEO bulk
460 3d old, both 10mM sucrose and 0.2µM SMX 0.58 >More info 0.24 >More info control Whole seedling Original data GEO bulk
461 inhibitor A Treated 0.23 >More info 0.59 >More info Negative Control Original data GEO bulk
462 R. solani AG8 0.30 >More info 0.51 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
463 ckh1 CK200 0.25 >More info 0.56 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
464 HairpinZ 4 h (leaf) 0.84 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
465 SIZ 0.50 >More info 0.30 >More info COL seedling Original data
466 Dex-rga(delta17) 2h GA4 -0.56 >More info -0.24 >More info Vector 4h GA4 shoots Original data GEO bulk
467 naxillin 6h 0.50 >More info 0.30 >More info before treatment naxillin root Original data GEO bulk
468 C24 UV1 -0.62 >More info -0.18 >More info C24 mock UV seedling Original data
469 leaf blade in FRD 0.25 >More info 0.55 >More info leaf blade in WL leaf blades Original data GEO bulk
470 AFB1 0h 0.57 >More info 0.23 >More info Col 0h Leaf Original data GEO bulk
471 Col-0 DCA 6d 0.65 >More info 0.14 >More info Col-0 MOCK 6d Original data GEO bulk
472 C24-1h IAA 0.67 >More info 0.12 >More info C24-0h IAA whole plant Original data GEO bulk
473 pvip1 pvip2 seedling 0.81 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
474 Col-0 norflurazon 0.27 >More info 0.52 >More info Col-0 control Original data GEO bulk
475 6h +Pi -0.28 >More info -0.51 >More info 6h -Pi root Original data GEO bulk
476 WT-Dry 0.28 >More info 0.51 >More info WT-CK dehydration treatment 1h Original data
477 Elevated CO2 AMPLE N DAY 0.28 >More info 0.51 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
478 camta3-2 0.50 >More info 0.28 >More info WT Original data GEO bulk
479 light -0.60 >More info -0.18 >More info dark light seedling Original data GEO bulk
480 DUO1 induced 12h -0.54 >More info -0.24 >More info 12hr-not-induced whole plant Original data GEO bulk
481 Dark 4 h pls RedLight 1min -0.26 >More info -0.52 >More info Dark 4 h Original data Light treatments
482 eif3h polysome 0.51 >More info 0.26 >More info WT polysome Original data GEO bulk
483 8 hr ammonium 0.52 >More info 0.25 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
484 Aerobic e1 ate2 0.55 >More info 0.22 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
485 AVG 3 h -0.25 >More info -0.52 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
486 abh1 -ABA 0.23 >More info 0.54 >More info Col-0 -ABA Original data GEO bulk
487 cop1 Seedling BL 0.19 >More info 0.58 >More info WT Seedling BL Original data GEO bulk
488 S14-150 0.56 >More info 0.20 >More info wt Original data GEO bulk
489 GO5; harvested 8h continiously maintained in high
CO2;		 -0.50 >More info -0.26 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
490 6-trichlorophenoxyacetic acid 3 h 0.21 >More info 0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
491 SHR-GR Time 1H Dex 0.52 >More info 0.23 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
492 polysome mRNA eif3k -0.56 >More info -0.19 >More info polysome mRNA WT aerial part Original data GEO bulk
493 SA Treated 0.67 >More info 0.08 >More info Water Original data GEO bulk
494 penta MeJA 1h 0.54 >More info 0.20 >More info Laer MeJA 1h leaf discs Original data GEO bulk
495 glk1 glk2 GLK1-GR +DEX 24h -0.76 >More info 0.02 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
496 toc1-1-53hr 0.51 >More info 0.23 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
497 Methyl Jasmonate 1 h 0.23 >More info 0.51 >More info Mock 1 h Original data Basic hormone treatment of seedlings
498 Selenate (root) 0.24 >More info 0.50 >More info Ws (root) Original data GEO bulk
499 over-tAPX -0.19 >More info -0.55 >More info WT Col Original data GEO bulk
500 Root Selenate 0.24 >More info 0.50 >More info Root control 40 micromolar selenate Root Original data GEO bulk
501 tbf1-mock spray 0.56 >More info 0.17 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
502 eif3h 0.53 >More info 0.20 >More info WT Original data GEO bulk
503 15m.KCl 0.20 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
504 amiRAP aerobic -0.18 >More info -0.55 >More info WT aerobic aerobic Original data GEO bulk
505 Bay-0-3h IAA 0.70 >More info 0.02 >More info Bay-0-0h IAA whole plant Original data GEO bulk
506 toc1-1-77hr 0.65 >More info 0.07 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
507 flu dark 8hours/30 minute light 0.11 >More info 0.61 >More info col dark 8hours/30 minute light Original data GEO bulk
508 long 12-degree- 0.22 >More info 0.50 >More info control long Original data GEO bulk
509 ALC Toc1 light-light Mock -0.51 >More info -0.20 >More info Col light-light Mock no ethanol Original data GEO bulk
510 des1.1 0.20 >More info 0.51 >More info Leaves-WT leaf Original data GEO bulk
511 GiantCell Root -0.55 >More info -0.15 >More info Control Root laser captured giant cells Original data GEO bulk
512 Laer Flg22(Agrobacterium) 1h 0.58 >More info 0.12 >More info Laer Control leaf discs Original data GEO bulk
513 wrky33 mock 0.52 >More info 0.17 >More info WT mock 14 hour mock control leaves Original data
514 Shoot P recovery 0.57 >More info 0.12 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
515 sex1-3 0.11 >More info 0.58 >More info Col-WT leaves Original data GEO bulk
516 root cap pGL2 0h BL 0.55 >More info 0.13 >More info WR 35S 0h BL brassinosteroid root Original data
517 WT H2O2 3h 0.15 >More info 0.53 >More info WT water 3h 3h_H2O2 Original data GEO bulk
518 tt4 0.14 >More info 0.54 >More info Col-0 aerial part Original data
519 rts1-5 0.59 >More info 0.09 >More info null-mutant whole plant Original data GEO bulk
520 Col-0 24hpi A. brassicicola 0.65 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
521 PIF5ox high R/FR -0.51 >More info -0.16 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
522 Al treated 0.15 >More info 0.52 >More info control Original data GEO bulk
523 A. thaliana-A. lyrata hybrid -0.12 >More info -0.54 >More info A. thaliana mature leaves before flowering Original data GEO bulk
524 Root -P -0.70 >More info 0.04 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
525 bZIP1ko mutant N-Light- -0.60 >More info -0.05 >More info WT-sib N-Light- whole plant Original data GEO bulk
526 ddm1-2 -0.53 >More info -0.12 >More info Col-0 plant inflorescence Original data
527 sfr6 drought -0.02 >More info -0.63 >More info WT drought All aerial tissue Original data GEO bulk
528 ahg2-1 -0.65 >More info 0.01 >More info WT (Col) control Original data GEO bulk
529 ACN1-2 Sucrose -0.56 >More info -0.07 >More info Col-7 Sucrose Original data GEO bulk
530 pmr5 0.53 >More info 0.10 >More info Col-0 rosette Original data GEO bulk
531 12h-DC3000 hrpA -0.56 >More info -0.06 >More info 12h-DC3000 leaves Original data GEO bulk
532 Mh0 UV -0.54 >More info -0.08 >More info Mh0 mock UV seedling Original data
533 F1 whole seedlings root 0.50 >More info 0.12 >More info Col whole seedlings root Seedlings Original data GEO bulk
534 Shoot -P -0.62 >More info 0.01 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
535 shoot control pKAT1 -0.51 >More info -0.10 >More info shoot control total Original data GEO bulk
536 Heat shock optimum -0.04 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
537 HARAP aerobic -0.08 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
538 CLV3n cells 0.55 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
539 seed germinating in countinuous light 24h SL -0.07 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
540 roottip hypoxia pSHR -0.50 >More info -0.10 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
541 Methyl Jasmonate 0.5 h 0.08 >More info 0.52 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
542 bri1-116 -0.13 >More info 0.73 >More info Col seedling Original data GEO bulk
543 ABA control 0.09 >More info 0.51 >More info No ABA control Original data GEO bulk
544 Leaf wounded 0.05 >More info 0.54 >More info Leaf control vegetative leaf Original data GEO bulk
545 ms1 unpollinated -0.50 >More info -0.09 >More info WT 8h-pollinated pistil Original data GEO bulk
546 Col PSTDC3000 24h 0.71 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
547 Cocultivation 8 hrs leaf -0.57 >More info -0.00 >More info Mock cocultivation 8 hrs leaf Leaf Original data
548 WT Red light 1h 0.58 >More info -0.01 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
549 Sha-1h IAA 0.54 >More info 0.01 >More info Sha-0h IAA whole plant Original data GEO bulk
550 gai Flg22 2h -0.51 >More info -0.04 >More info Laer Flg22 2h leaf discs Original data GEO bulk
551 opr3 JA 0.5 h -0.01 >More info 0.56 >More info opr3 0 h Original data GEO bulk
552 P. infestans 6 h (leaf) 0.70 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
553 penta Flg22 1h 0.54 >More info -0.01 >More info Laer Flg22 1h leaf discs Original data GEO bulk
554 anac017-2 water 3h -0.61 >More info 0.09 >More info WT water 3h 3h_water Original data GEO bulk
555 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.55 >More info -0.03 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
556 ein2-PsmES4326-24hpi 0.07 >More info -0.58 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
557 Ws leaf 100mM NaCl -0.03 >More info 0.53 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
558 Ws 100mM NaCl -0.03 >More info 0.53 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
559 ABA -0.51 >More info 0.03 >More info control Original data GEO bulk
560 myb50 xylem 0.50 >More info -0.03 >More info wt xylem xylem Original data GEO bulk
561 Root P recovery 0.55 >More info -0.10 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
562 tt4 UV -0.12 >More info 0.54 >More info UV aerial region Original data GEO bulk
563 harboring empty vector+CHX -0.51 >More info 0.11 >More info harboring empty vector+DEX +CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
564 CCA1-ox 6am non-polysomal -0.12 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
565 coi1-PsmES4326-24hpi 0.21 >More info -0.56 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
566 T101D 10mM NH4NO3 -0.22 >More info 0.51 >More info col 10mM NH4NO3 Root Original data
567 Protoplast Induced -0.26 >More info 0.53 >More info Uninduced Original data GEO bulk
568 ckh2 CK25 0.53 >More info -0.28 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
569 WT NAA 2h 0.53 >More info -0.29 >More info WT 0h Leaf tissue Original data GEO bulk
570 glk1 glk2 GLK1-GR +DEX 4h 0.53 >More info -0.31 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
571 AGL24 induced 0.51 >More info -0.30 >More info WT-ESTRADIOL Original data GEO bulk
572 hai1-2 low water potential -0.58 >More info 0.37 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
573 Shoot apex inflorescence (after bolting) -0.49 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
574 amiR-tor induced 6d -0.48 >More info 0.57 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk