4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root - 04% oxygen - 48h
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List of experiments correlated with "root - 04% oxygen - 48h"  Help Download transcriptome of top 30
Score Experiment Correlation from
root - 04% oxygen - 48h		 Correlation to
root - 04% oxygen - 48h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root - 04% oxygen - 48h 1.00 >More info 1.00 >More info root - 21% oxygen - 48h Original data GEO bulk
2 root - 08% oxygen - 48h 0.91 >More info 0.91 >More info root - 21% oxygen - 48h Original data GEO bulk
3 root - 01% oxygen - 48h 0.94 >More info 0.87 >More info root - 21% oxygen - 48h Original data GEO bulk
4 root - 01% oxygen - 2h 0.88 >More info 0.82 >More info root - 21% oxygen - 2h Original data GEO bulk
5 root - 04% oxygen - 2h 0.84 >More info 0.83 >More info root - 21% oxygen - 2h Original data GEO bulk
6 WT Root Hypoxia 0.87 >More info 0.78 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
7 Aerobic e1 ate2 0.81 >More info 0.81 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
8 root - 08% oxygen - 2h 0.78 >More info 0.83 >More info root - 21% oxygen - 2h Original data GEO bulk
9 root - 04% oxygen - 30min 0.78 >More info 0.79 >More info root - 21% oxygen - 30min Original data GEO bulk
10 root - 01% oxygen - 30min 0.74 >More info 0.80 >More info root - 21% oxygen - 30min Original data GEO bulk
11 Col-0 wt Hypoxic 0.86 >More info 0.65 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
12 Aerobic prt6 0.80 >More info 0.68 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
13 shoot hypoxia total 0.78 >More info 0.64 >More info shoot control total Original data GEO bulk
14 WT Shoot Hypoxia 0.77 >More info 0.62 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
15 UV Stress 24 h (root) -0.87 >More info -0.51 >More info Stress mock 24 h (root) Original data Stress treatments
16 MPK6 ox Root Hypoxia 0.82 >More info 0.56 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
17 root hypoxia total 0.82 >More info 0.54 >More info root control total Original data GEO bulk
18 Col upon hypoxia 6 hrs 0.87 >More info 0.48 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
19 20m.KCl -0.72 >More info -0.62 >More info To. KCl 14 day old Roots Original data GEO bulk
20 root - 08% oxygen - 30min 0.65 >More info 0.69 >More info root - 21% oxygen - 30min Original data GEO bulk
21 msg2-BR 0.77 >More info 0.55 >More info BR BR dark-grown seedlings Original data GEO bulk
22 Hypoxic e1 ate 0.71 >More info 0.61 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
23 seed germinating in countinuous light 24h SL 0.64 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
24 MPK6 ox Shoot Hypoxia 0.68 >More info 0.63 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
25 35S:PCO1 hypoxia -0.64 >More info -0.66 >More info WT hypoxia whole rosette Original data
26 roottip hypoxia total 0.81 >More info 0.48 >More info roottip control total Original data GEO bulk
27 bak1-3 untreated 0.77 >More info 0.50 >More info WT untreated untreated Original data GEO bulk
28 pepr1-1 Pepr2-3 untreated 0.70 >More info 0.57 >More info WT untreated untreated Original data GEO bulk
29 seedlings + TSA 0.76 >More info 0.46 >More info control seedlings 10-day old whole seedling Original data GEO bulk
30 Heat Recovery 24 h (root) -0.86 >More info -0.35 >More info Stress mock 24 h (root) Original data Stress treatments
31 Cs root -0.85 >More info -0.36 >More info control root Original data GEO bulk
32 mdh -0.68 >More info -0.52 >More info Col Original data GEO bulk
33 phr1 Root-Pi -0.80 >More info -0.37 >More info WT Root+Pi roots Original data GEO bulk
34 nas4x roots - Fe 0.44 >More info 0.73 >More info WT roots - Fe Roots Original data GEO bulk
35 estradiole-induced ANAC059 -0.54 >More info -0.61 >More info transgenic (empty vector inducible system) Original data GEO bulk
36 afb3-1 2h KCl -0.65 >More info -0.48 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
37 HARAP aerobic 0.63 >More info 0.50 >More info WT aerobic aerobic Original data GEO bulk
38 cys-c1 root 0.77 >More info 0.35 >More info Root-WT roots Original data GEO bulk
39 seedling -S Exp -0.50 >More info -0.60 >More info seedling FN Exp seedling Original data
40 cop1 Seedling Dark 0.49 >More info 0.61 >More info WT Seedling Dark Original data GEO bulk
41 Col BTH 0.42 >More info 0.67 >More info Col rosettes Original data GEO bulk
42 ABA 1 h -0.40 >More info -0.69 >More info Mock 1 h Original data Basic hormone treatment of seedlings
43 OE-HRA1 2HS  -0.68 >More info -0.40 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
44 35S::HRE2 Aerobic -0.51 >More info -0.57 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
45 2 hr Hypoxia Total RNA 0.80 >More info 0.28 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
46 Hypoxic prt6 0.75 >More info 0.32 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
47 9m.KNO3 -0.80 >More info -0.27 >More info To. KNO3 14 day old Roots Original data GEO bulk
48 8-DAC chr11-1chr17-1 -0.70 >More info -0.37 >More info 8-DAC Col-0 leaf explants Original data
49 Mutant iaa5_6_19 0.72 >More info 0.35 >More info Col Original data GEO bulk
50 prt6-1 0.72 >More info 0.34 >More info Col-0 imbibed for 24 h Pre-germinated seeds Original data GEO bulk
51 axr2-BR 0.65 >More info 0.41 >More info BR BR dark-grown seedlings Original data GEO bulk
52 Heat shock optimum 0.39 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
53 Col-0 2HS 0.78 >More info 0.25 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
54 iron minus 6 h -0.78 >More info -0.25 >More info iron +6 h root Original data GEO bulk
55 mtf1-1 0.51 >More info 0.52 >More info Col0 root Original data
56 hog1-7 0.78 >More info 0.25 >More info wt whole seedling Original data GEO bulk
57 mutant-line774 0.78 >More info 0.25 >More info WT-control whole plant Original data GEO bulk
58 seedling h S Exp 0.37 >More info 0.65 >More info seedling -S Exp seedling Original data
59 Nuclear GSH1 -0.68 >More info -0.33 >More info Cytoplasmic GSH1 Control Original data GEO bulk
60 aux1 mutant roots air -0.68 >More info -0.33 >More info roots IAA Original data GEO bulk
61 atmyc2 Seedling BL -0.47 >More info -0.54 >More info WT Seedling BL Original data GEO bulk
62 ckh2 CK25 0.57 >More info 0.43 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
63 mutant-line1135 0.72 >More info 0.28 >More info WT-control whole plant Original data GEO bulk
64 ddm1-12 0.72 >More info 0.28 >More info wt whole seedling Original data GEO bulk
65 Tsu -Fe 24h Roots 0.73 >More info 0.26 >More info Tsu +Fe 24h Roots Original data GEO bulk
66 P-chlorophenoxy- isobutyric acid 3 h -0.64 >More info -0.35 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
67 Tsu-1 -Fe 24h 0.73 >More info 0.26 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
68 scl3 0.64 >More info 0.35 >More info Col-0 whole root Original data GEO bulk
69 bri1-116 0.26 >More info 0.73 >More info Col seedling Original data GEO bulk
70 WT light 0.53 >More info 0.45 >More info WT dark Original data GEO bulk
71 C58 6dpi 0.66 >More info 0.31 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
72 Shoot apex inflorescence (after bolting) 0.32 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
73 bZIP1ko mutant N+Light- -0.23 >More info -0.74 >More info WT-sib N+Light- whole plant Original data GEO bulk
74 WT +elf18 2h -0.73 >More info -0.23 >More info WT untreated elf18 Original data GEO bulk
75 WT +elf18 10h -0.67 >More info -0.29 >More info WT untreated elf18 Original data GEO bulk
76 15m.KNO3 -0.69 >More info -0.27 >More info To. KNO3 14 day old Roots Original data GEO bulk
77 estradiole-induced ANAC092 -0.56 >More info -0.39 >More info transgenic (empty vector inducible system) Original data GEO bulk
78 WT Root-Pi -0.67 >More info -0.28 >More info WT Root+Pi roots Original data GEO bulk
79 2 hr Hypoxia IP RNA 0.75 >More info 0.20 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
80 1.5 hr nitrate 0.64 >More info 0.31 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
81 erf5 erf6 0.54 >More info 0.41 >More info WT+water water seedlings Original data GEO bulk
82 root longitudinal zone-4 low sulfur 0.36 >More info 0.59 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
83 R. amphibia submerged 0.68 >More info 0.26 >More info R. amphibia air Original data GEO bulk
84 Col-0 low oxygen 0.73 >More info 0.21 >More info Col-0 control low oxygen root Original data GEO bulk
85 spx1 spx2 complete -0.66 >More info -0.27 >More info WT complete seedlings Original data
86 9 hr Hypoxia Total RNA 0.79 >More info 0.14 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
87 12m.KNO3 -0.81 >More info -0.12 >More info To. KNO3 14 day old Roots Original data GEO bulk
88 GA3 3 h (ga1) -0.53 >More info -0.40 >More info Mock 3 h (ga1) Original data Basic hormone treatment of seedlings
89 ahg2-1abi1-1 0.76 >More info 0.16 >More info WT (Col) control Original data GEO bulk
90 mbd4 mutant thaliana 10-day-old seedling 0.71 >More info 0.21 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
91 ckh1 CK0 0.67 >More info 0.24 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
92 P.p 2.5hai 0.75 >More info 0.16 >More info At-Control roots Original data GEO bulk
93 siliques AtHb1 control 0.39 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
94 Stem tissue 5 days NAA 0.71 >More info 0.20 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
95 4C 1h -0.41 >More info -0.50 >More info 4C 0h Original data GEO bulk
96 WT no Pi -0.50 >More info -0.40 >More info WT complete seedlings Original data
97 axr2 0.55 >More info 0.34 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
98 ahg2-1 0.76 >More info 0.13 >More info WT (Col) control Original data GEO bulk
99 WT zebularine 0.50 >More info 0.39 >More info WT mock shoot apical meristem Original data
100 WT resupplied Pi 4h -0.57 >More info -0.32 >More info WT complete seedlings Original data
101 piffq 3d WL 0.68 >More info 0.20 >More info WT 3d WL whole seedling Original data GEO bulk
102 Var2-1 roots 2hr KCl control -0.74 >More info -0.14 >More info Col0 roots 2hr KCl control root Original data GEO bulk
103 PNO8 12 h -0.66 >More info -0.22 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
104 csn5 (csn5a-2 csn5b) dark 0.60 >More info 0.27 >More info WT dark Original data GEO bulk
105 GV3101 6dpi 0.75 >More info 0.12 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
106 Drought Stress 24 h (root) -0.69 >More info -0.18 >More info Stress mock 24 h (root) Original data Stress treatments
107 msg2 0.66 >More info 0.20 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
108 ckh1 CK25 0.66 >More info 0.20 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
109 DMTU 0.65 >More info 0.21 >More info control Original data GEO bulk
110 whole roots -Fe 72 hour 0.74 >More info 0.12 >More info whole roots standard Original data GEO bulk
111 Genotoxic Stress 3 h (root) -0.77 >More info -0.09 >More info Stress mock 3 h (root) Original data Stress treatments
112 0.2µM SMX -0.63 >More info -0.23 >More info control Whole seedling Original data GEO bulk
113 Fe starvation 72 h 0.74 >More info 0.12 >More info Control Original data GEO bulk
114 IAA Treated 0.52 >More info 0.33 >More info Negative Control Original data GEO bulk
115 IAA7mII over-expressor mock -0.72 >More info -0.13 >More info empty vector mock Original data GEO bulk
116 elevated CO2 normal Mg root -0.60 >More info -0.25 >More info atmospheric CO2 normal Mg root Root Original data
117 Col-7 Sucrose 0.69 >More info 0.16 >More info col-7 Original data GEO bulk
118 myb50 xylem 0.68 >More info 0.15 >More info wt xylem xylem Original data GEO bulk
119 9 hr Hypoxia 1 hr recovery Total RNA 0.76 >More info 0.07 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
120 Paclobutrazol 12 h -0.51 >More info -0.32 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
121 ckh2 CK0 0.61 >More info 0.22 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
122 elevated CO2 high Mg root -0.71 >More info -0.12 >More info atmospheric CO2 high Mg root Root Original data
123 1.5 hr ammonium 0.74 >More info 0.09 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
124 Full AC2 T2 0.62 >More info 0.20 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
125 4h decapitation 0.52 >More info 0.30 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
126 CabpBVR2 -0.31 >More info -0.51 >More info WT Original data GEO bulk
127 WT (Col-0) inflorescence moderate drought day 10 -0.57 >More info -0.25 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
128 WT (Ler) CK200 0.70 >More info 0.12 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
129 20m.KNO3 -0.74 >More info -0.08 >More info To. KNO3 14 day old Roots Original data GEO bulk
130 F1 hybrid submerged 0.68 >More info 0.13 >More info F1 hybrid air Original data GEO bulk
131 mutant-line409 0.66 >More info 0.15 >More info WT-control whole plant Original data GEO bulk
132 cys-c1 leaf -0.63 >More info -0.18 >More info Leaf-WT leaves Original data GEO bulk
133 hypoxic 0.70 >More info 0.11 >More info WT aerobic hypoxia Original data GEO bulk
134 9 hr Hypoxia IP RNA 0.76 >More info 0.04 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
135 IAA 24h 0.50 >More info 0.30 >More info control 24h root Original data GEO bulk
136 piffq FR 24h 0.75 >More info 0.05 >More info WT FR 24h whole seedling Original data GEO bulk
137 WT NAA 1h 0.30 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
138 low CO2 + light -0.30 >More info -0.50 >More info normal CO2 + light Original data GEO bulk
139 whole roots -Fe 48 hour 0.71 >More info 0.09 >More info whole roots standard Original data GEO bulk
140 24h SL WT 0.59 >More info 0.20 >More info 0 h WT seed Original data
141 det2 light-dark -0.64 >More info -0.15 >More info det2 light light-dark Original data GEO bulk
142 brat1nrpe1 0.13 >More info 0.66 >More info WT Original data
143 tetraploid -0.26 >More info -0.53 >More info diploid Original data GEO bulk
144 WT cold 24h -0.55 >More info -0.23 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
145 Salt Stress 24 h (root) -0.58 >More info -0.20 >More info Stress mock 24 h (root) Original data Stress treatments
146 R. sylvestris submerged 0.68 >More info 0.10 >More info R. sylvestris air Original data GEO bulk
147 S5 -0.27 >More info -0.51 >More info WT Original data GEO bulk
148 myb3 myb3r4d -0.69 >More info -0.09 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
149 triplod male excess 0.56 >More info 0.21 >More info tetraploid Original data GEO bulk
150 spores of Gigaspora rosea 0.53 >More info 0.24 >More info Control Original data GEO bulk
151 shoots WT 0uM Fe 0.62 >More info 0.15 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
152 elevated CO2 low Mg root -0.67 >More info -0.10 >More info atmospheric CO2 low Mg root Root Original data
153 pip3 At2g19270 TDNA 6h-1 -0.54 >More info -0.23 >More info Col-0 whole plant Original data GEO bulk
154 Te 3d 0.62 >More info 0.15 >More info Te CA Leaves Original data
155 Prohexadione 3 h -0.78 >More info 0.01 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
156 oas-a1.1 root -0.53 >More info -0.24 >More info WT-Untreated Root Original data GEO bulk
157 SQ8 roots 2hr KCl control -0.54 >More info -0.23 >More info Col0 roots 2hr KCl control root Original data GEO bulk
158 Norflurazon 0.69 >More info 0.08 >More info Col-0 Original data GEO bulk
159 PRR5-VP 12h light on -0.69 >More info -0.08 >More info WT 12h light on whole plant Original data GEO bulk
160 Norflurazon 0.69 >More info 0.08 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
161 ein3 eil1 JA 0.64 >More info 0.12 >More info JA Whole seedling Original data GEO bulk
162 9 hr Hypoxia 1 hr recovery IP RNA 0.75 >More info 0.01 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
163 gun5 control 0.61 >More info 0.15 >More info Col-0 control Original data GEO bulk
164 mp-B4149 mutant IAA 0.58 >More info 0.18 >More info GR-bdl IAA Original data GEO bulk
165 Bay-0-3h IAA -0.70 >More info -0.05 >More info Bay-0-0h IAA whole plant Original data GEO bulk
166 Oxidative Stress 3 h (root) 0.50 >More info 0.25 >More info Stress mock 3 h (root) Original data Stress treatments
167 Imbibed 3 h (seed) 0.60 >More info 0.15 >More info Dry seed Original data Time course of early seed germination
168 24h SL Attim 17-1 1 0.55 >More info 0.20 >More info 0 h Attim 17-1 1 seed Original data
169 FHY3p dark+DEX -0.59 >More info -0.16 >More info FHY3p dark+mock Original data GEO bulk
170 csn3-1 dark 0.52 >More info 0.23 >More info WT dark Original data GEO bulk
171 WT Seedling BL 0.24 >More info 0.51 >More info WT Seedling Dark Original data GEO bulk
172 8hr-pH4.5 -0.50 >More info -0.24 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
173 arr-BA-sample 0.52 >More info 0.22 >More info Wt-BA-sample seedling Original data
174 mutant-line348 0.68 >More info 0.06 >More info WT-control whole plant Original data GEO bulk
175 pif1-2 dark -0.52 >More info -0.22 >More info Wt dark Original data GEO bulk
176 Mutant pif1-2 (Dark etiol) -0.52 >More info -0.22 >More info Col-0 (Dark etiol) Original data GEO bulk
177 atsf1-2 mutant seedling 0.57 >More info 0.17 >More info Col-0 seedling seedlings Original data
178 T6 leaf-drought -0.14 >More info -0.60 >More info T6 leaf-well watered Original data GEO bulk
179 Kas2 roots 2hr KNO3 nitrogen -0.59 >More info -0.14 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
180 abi3-6 12 DAF Seed 0.51 >More info 0.21 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
181 Callus 0.72 >More info 0.00 >More info Control for tissue data callus Original data GEO bulk
182 Full C2 T2 -0.51 >More info -0.21 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
183 E2Fa-Dpa 0.54 >More info 0.18 >More info WT Original data GEO bulk
184 FLIGHT BRIC G PDFU-112 seedlings 0.51 >More info 0.21 >More info GROUNDCONTROL BRIC G PDFU-135 seedlings seedling Original data
185 Root submergence 24h 0.62 >More info 0.10 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
186 Tsu-1 -Fe 48h 0.86 >More info -0.14 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
187 Tsu -Fe 48h Roots 0.86 >More info -0.14 >More info Tsu +Fe 24h Roots Original data GEO bulk
188 atmyc2 cop1 Seedling Dark 0.19 >More info 0.53 >More info WT Seedling Dark Original data GEO bulk
189 Sha-3h IAA -0.67 >More info -0.04 >More info Sha-0h IAA whole plant Original data GEO bulk
190 seed germinating in countinuous light 12 h SL 0.58 >More info 0.13 >More info Control for tissue data seed Original data GEO bulk
191 8 hr ammonium 0.69 >More info 0.01 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
192 Kas-1 -Fe 24h 0.13 >More info 0.57 >More info Kas-1 +Fe 24h roots Original data GEO bulk
193 Kas -Fe 24h Roots 0.13 >More info 0.57 >More info Kas +Fe 24h Roots Original data GEO bulk
194 dsr1 SA Treated -0.52 >More info -0.17 >More info SA Whole seedling Original data GEO bulk
195 coi1-2 JA -0.55 >More info -0.14 >More info JA Whole seedling Original data GEO bulk
196 Cambium 5 days NAA 0.65 >More info 0.04 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
197 piffq FR 3h 0.63 >More info 0.06 >More info WT FR 3h whole seedling Original data GEO bulk
198 tumour 0.63 >More info 0.06 >More info non-tumor tumour Original data GEO bulk
199 iae1 0.59 >More info 0.10 >More info B179 Original data GEO bulk
200 2hr continuous KCl and MSX control PeR cell -0.51 >More info -0.18 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
201 OsTOP6B ox 0.64 >More info 0.04 >More info WT Original data GEO bulk
202 SCL3 OE -0.68 >More info -0.00 >More info Col-0 whole root Original data GEO bulk
203 siliques WT hypoxia 0.67 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
204 root cells epidermis 140mM NaCl 48 hours 0.51 >More info 0.17 >More info root cells epidermis standard 1 hour root cells epidermis Original data
205 P.p 6hai 0.71 >More info -0.03 >More info At-Control roots Original data GEO bulk
206 root cells endodermis 140mM NaCl 32 hours 0.50 >More info 0.18 >More info root cells endodermis standard 1 hour root cells endodermis Original data
207 WT 3H Cold -0.50 >More info -0.17 >More info WT control Original data GEO bulk
208 root cells epidermis 140mM NaCl 20 hours 0.51 >More info 0.16 >More info root cells epidermis standard 1 hour root cells epidermis Original data
209 Leafminer damaged seedlings 0.11 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
210 BI-1-30min IAA -0.59 >More info -0.08 >More info BI-1-0h IAA whole plant Original data GEO bulk
211 gun1gun5 Norflurazon 0.58 >More info 0.09 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
212 ddm1 mutant seedlings -0.58 >More info -0.09 >More info control seedlings 10-day old whole seedling Original data GEO bulk
213 WT (Col-0) inflorescence moderate drought day 5 -0.55 >More info -0.11 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
214 Col-0 root drought 0.65 >More info -0.00 >More info Col-0 root water root Original data GEO bulk
215 rao2 H2O2 3h -0.50 >More info -0.15 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
216 JMJ24 knockout 0.64 >More info 0.01 >More info WT Original data GEO bulk
217 IAA19mII over-expressor mock -0.50 >More info -0.15 >More info empty vector mock Original data GEO bulk
218 Mutant iaa5_6_19(IAA) 0.70 >More info -0.05 >More info Col (IAA) Original data GEO bulk
219 Var2-1 roots 2hr KNO3 nitrogen -0.58 >More info -0.07 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
220 ga1-3/brm-1 0.74 >More info -0.10 >More info wt shoots Original data GEO bulk
221 gun1gun5 far-red pretreated -0.60 >More info -0.04 >More info WT far-red pretreated Original data GEO bulk
222 dsr1 -0.66 >More info 0.02 >More info WT mock Whole seedling Original data GEO bulk
223 Mutant ga1-5 0.59 >More info 0.05 >More info Ler-1 Original data Comparison of plant hormone related mutant
224 RRE1 0.58 >More info 0.06 >More info Col C Original data GEO bulk
225 Ws seedlings -0.56 >More info -0.07 >More info ged1 seedlings Original data GEO bulk
226 ged1 seedlings 0.56 >More info 0.07 >More info Ws seedlings Original data GEO bulk
227 Wounding Stress3 h (root) -0.66 >More info 0.03 >More info Stress mock 3 h (root) Original data Stress treatments
228 sta1 0.55 >More info 0.08 >More info WT Original data GEO bulk
229 iron minus 24h -0.76 >More info 0.13 >More info iron +24h root Original data GEO bulk
230 COL-0-Fe--root 0.53 >More info 0.10 >More info COL-0-Ctrl--root root Original data
231 pnp1-1 1wk +P 0.61 >More info 0.02 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
232 Mutant ap2-6(shoot apex) 0.63 >More info -0.01 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
233 Root submergence 7h 0.50 >More info 0.12 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
234 Col0-PsmES4326-24hpi 0.01 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
235 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.54 >More info -0.07 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
236 RGA-GR-DEX 0.54 >More info 0.07 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
237 ALC Toc1 light-light Mock -0.51 >More info -0.10 >More info Col light-light Mock no ethanol Original data GEO bulk
238 P.p 10.5hai 0.59 >More info 0.02 >More info At-Control roots Original data GEO bulk
239 cngc1-3 0.61 >More info -0.00 >More info Col-0 root Original data GEO bulk
240 QK HS 0.52 >More info 0.09 >More info QK control heat shocked seedling Original data GEO bulk
241 Pseudomonas 0.67 >More info -0.07 >More info Control pseudomonas treated whole seedling Original data GEO bulk
242 OsTOP6A3 ox 0.56 >More info 0.04 >More info WT Original data GEO bulk
243 ein2 1% sucrose 14-day-old 0.54 >More info 0.06 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
244 pft1 23C -0.07 >More info -0.53 >More info WT 23C seedling Original data GEO bulk
245 piffq 2d WL 0.60 >More info 0.00 >More info WT 2d WL whole seedling Original data GEO bulk
246 ref6-1 0.57 >More info 0.03 >More info Col whole seedling Original data GEO bulk
247 3x(m) -0.03 >More info -0.57 >More info 2x two week old seedlings Original data
248 vte1-1 3d vernalization -0.55 >More info -0.04 >More info WT 3d vernalization Original data GEO bulk
249 Mutant axr3-1 0.65 >More info -0.06 >More info Col Original data GEO bulk
250 vtc2 day 7 induction 0.52 >More info 0.07 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
251 ABA 0.5 h -0.04 >More info -0.55 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
252 dark-hs -0.56 >More info -0.02 >More info dark-control seedling Original data
253 WT hypoxia 0.55 >More info 0.03 >More info WT normoxia whole rosette Original data
254 Sha-1h IAA -0.53 >More info -0.05 >More info Sha-0h IAA whole plant Original data GEO bulk
255 ubc13A-es -0.55 >More info -0.03 >More info Col-es root Original data GEO bulk
256 pvip1 pvip2 seedling 0.60 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
257 C58 35dpi 0.61 >More info -0.03 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
258 WT seedlings MV 0.64 >More info -0.07 >More info WT seedlings control Seedlings Original data GEO bulk
259 2hr continuous KNO3 ECR cell -0.04 >More info -0.53 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
260 L2.5 mutant -0.61 >More info 0.04 >More info Wt Original data GEO bulk
261 PRR5-VP 6h light on -0.58 >More info 0.01 >More info WT 6h light on whole plant Original data GEO bulk
262 root callus inducing medium 12 h -0.50 >More info -0.06 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
263 WT (Col-0) inflorescence moderate drought day 3 -0.50 >More info -0.06 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
264 BI-1-3h IAA -0.50 >More info -0.06 >More info BI-1-0h IAA whole plant Original data GEO bulk
265 Prohexadione 12 h -0.53 >More info -0.03 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
266 lib 0.05 >More info 0.51 >More info WT whole seedling Original data GEO bulk
267 Truncated AC2 T1 -0.55 >More info -0.00 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
268 ebs Pool -0.51 >More info -0.03 >More info Ler Pool seedling Original data GEO bulk
269 WT mitomycin C 0.50 >More info 0.04 >More info WT mock shoot apical meristem Original data
270 Col-0 norflurazon 0.50 >More info 0.04 >More info Col-0 control Original data GEO bulk
271 R. solani AG8 0.54 >More info -0.00 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
272 Dex-rga(delta17) 4h GA4 0.02 >More info 0.52 >More info Vector 4h GA4 shoots Original data GEO bulk
273 etr1 1% sucrose 12-day-old 0.66 >More info -0.13 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
274 empty vector IAA Treated -0.65 >More info 0.13 >More info empty vector mock Original data GEO bulk
275 Laer GA 1h 0.08 >More info -0.60 >More info Laer Control leaf discs Original data GEO bulk
276 Col-0 SA 0.54 >More info -0.03 >More info Col-0 water complete seedling Original data
277 Light 0.56 >More info -0.05 >More info Control Original data GEO bulk
278 mbd6 mutant thaliana 10-day-old seedling 0.51 >More info 0.00 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
279 pkl Mutant mock 0.52 >More info -0.01 >More info WT mock Original data GEO bulk
280 gir flower 33d 0.53 >More info -0.02 >More info Col-7 flower 33d flower Original data GEO bulk
281 P35S:rGRF3 0.54 >More info -0.03 >More info WS Original data GEO bulk
282 FarRed Light 45min -0.09 >More info 0.60 >More info White Light 45min Original data Light treatments
283 cngc1 -0.64 >More info 0.14 >More info Ws-2 Seedlings Original data GEO bulk
284 shoots bhlh100/101 0uM Fe 0.60 >More info -0.10 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
285 toc1-1-69hr 0.54 >More info -0.04 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
286 Ts5 roots 2hr KCl control -0.53 >More info 0.03 >More info Col0 roots 2hr KCl control root Original data GEO bulk
287 6m.KNO3 -0.66 >More info 0.16 >More info To. KNO3 14 day old Roots Original data GEO bulk
288 Kas2 roots 2hr KCl control -0.55 >More info 0.05 >More info Col0 roots 2hr KCl control root Original data GEO bulk
289 sicy-192 cotyledons 0.53 >More info -0.04 >More info WT cotyledons cotyledons Original data
290 Col-O low light 0.56 >More info -0.07 >More info Col-O bule light Original data GEO bulk
291 Ts5 roots 2hr KNO3 nitrogen -0.55 >More info 0.06 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
292 4C 7d -0.50 >More info 0.01 >More info 4C 0h Original data GEO bulk
293 Bay-0-1h IAA -0.54 >More info 0.06 >More info Bay-0-0h IAA whole plant Original data GEO bulk
294 dor drought 0.05 >More info -0.53 >More info WT drought Original data GEO bulk
295 Mutant iaa17-6 0.51 >More info -0.05 >More info Col Original data GEO bulk
296 ice1 control 0.52 >More info -0.06 >More info WT control Original data GEO bulk
297 rsl4 -0.50 >More info 0.04 >More info Col-0 Control root Original data GEO bulk
298 sfr3 cold -0.08 >More info 0.54 >More info WT-cold aerial tissues Original data GEO bulk
299 SCR-GR Time 12H Dex 0.60 >More info -0.14 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
300 sicy-192 gun1-101 cotyledons 0.50 >More info -0.05 >More info WT cotyledons cotyledons Original data
301 clf-28 swn-7 0.58 >More info -0.13 >More info Col whole plant Original data GEO bulk
302 CeO2 germinant -0.70 >More info 0.25 >More info Millipore Water germinant CeO2 seedling Original data
303 ANOXIA 0.57 >More info -0.12 >More info ANOXIA+SUCROSE Original data GEO bulk
304 IAA7mII over-expressor IAA Treated -0.24 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
305 afb3-1 2h KNO3 -0.10 >More info 0.54 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
306 ice1 6H Cold 0.51 >More info -0.07 >More info WT 6H Cold Original data GEO bulk
307 seedlings +5AC 0.52 >More info -0.08 >More info control seedlings 10-day old whole seedling Original data GEO bulk
308 TA induced 0.60 >More info -0.16 >More info Methanol TA Suspension cells Original data GEO bulk
309 per1 in Pi deficiency medium 0.58 >More info -0.14 >More info Col in Pi deficiency medium root Original data GEO bulk
310 C58 3hpi 0.57 >More info -0.13 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
311 CCA1-ox 6am non-polysomal -0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
312 Col-0 low oxygen 0.61 >More info -0.19 >More info Col-0 Original data GEO bulk
313 ACN1-2 Sucrose -0.56 >More info 0.15 >More info Col-7 Sucrose Original data GEO bulk
314 Laer pretreat GA Flg22 1h -0.32 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
315 RRE2 Chitin 0.52 >More info -0.14 >More info Chitin Original data GEO bulk
316 CCA14 dark late -0.52 >More info 0.14 >More info Col dark late Original data GEO bulk
317 Col-0 +lincomycin 0.58 >More info -0.20 >More info Col-0 -lincomycin Original data GEO bulk
318 ein3 eil1 0.57 >More info -0.19 >More info Col-0 mock Whole seedling Original data GEO bulk
319 Imbibed 24 h ABA 3uM (seed) -0.56 >More info 0.21 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
320 amiRAP hypoxic -0.65 >More info 0.30 >More info hypoxic hypoxia Original data GEO bulk
321 triploid female excess -0.22 >More info 0.56 >More info tetraploid Original data GEO bulk
322 cngc19 0.56 >More info -0.23 >More info Col-0 root Original data GEO bulk
323 Brz220 12 h -0.58 >More info 0.25 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
324 ckh1 CK200 0.18 >More info -0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
325 4d red light grown hmr-22 seedlings 0.52 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
326 Mutant cry1 -0.71 >More info 0.42 >More info Col-0 Original data GEO bulk
327 cry1 low light -0.71 >More info 0.42 >More info Col-O low light Original data GEO bulk
328 shoots bhlh100/101 100uM Fe 0.56 >More info -0.28 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
329 Imbibed 24 h ABA 30uM (seed) -0.57 >More info 0.29 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
330 npr1-1 SA -0.52 >More info 0.25 >More info Col-0 SA complete seedling Original data
331 RRE1 Chitin 0.50 >More info -0.24 >More info Chitin Original data GEO bulk
332 Col-O high light 0.50 >More info -0.24 >More info Col-O bule light Original data GEO bulk
333 IRP1-OE-Ctrl--shoot 0.56 >More info -0.32 >More info COL-0-Ctrl--shoot shoot Original data
334 Mutant arf19-1 0.37 >More info -0.60 >More info Col Original data GEO bulk
335 Seedling KUA1-IOX est 0.67 >More info -0.54 >More info Seedling KUA1-IOX mock Original data
336 TNT-seedlings 0.52 >More info -0.50 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk