4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT chitooctaose
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List of experiments correlated with "WT chitooctaose"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT chitooctaose		 Correlation to
WT chitooctaose		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT chitooctaose 1.00 >More info 1.00 >More info WT water Original data GEO bulk
2 chito-octamer 0.87 >More info 0.88 >More info Col Mock Original data GEO bulk
3 WT+chitooctaose 0.86 >More info 0.89 >More info WT+water chitooctaose seedlings Original data GEO bulk
4 chito-tetramer 0.86 >More info 0.88 >More info Col Mock Original data GEO bulk
5 AtLysM RLK1 mutant chitooctaose -0.90 >More info -0.84 >More info WT chitooctaose Original data GEO bulk
6 Cycloheximide 3 h 0.82 >More info 0.79 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
7 seedlings protease IV 0.78 >More info 0.79 >More info seedlings nontreated control whole seedling Original data
8 Chitin 0.81 >More info 0.75 >More info Col C Original data GEO bulk
9 miR393 flg22 1h 0.76 >More info 0.77 >More info WT 0h Leaf tissue Original data GEO bulk
10 WT flg22 1h 0.76 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
11 35S:RPS4 eds1-2 2h -0.71 >More info -0.78 >More info 35S:RPS4 2h leaves Original data
12 AFB1 flg22 1h 0.76 >More info 0.72 >More info WT 0h Leaf tissue Original data GEO bulk
13 WT NAA/flg 1h 0.74 >More info 0.72 >More info WT 0h Leaf tissue Original data GEO bulk
14 Laer Flg22+GA 1h 0.75 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
15 AgNO3 3 h 0.66 >More info 0.79 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
16 P.p 2.5hai 0.73 >More info 0.71 >More info At-Control roots Original data GEO bulk
17 Col ozone 3h 0.65 >More info 0.78 >More info Col clean-air 3h ozone Original data GEO bulk
18 pepr1-1 Pepr2-3 +Pep2 2h -0.71 >More info -0.72 >More info WT +Pep2 2h Pep2 Original data GEO bulk
19 Laer Flg22 1h 0.73 >More info 0.69 >More info Laer Control leaf discs Original data GEO bulk
20 WT flg22 2h 0.69 >More info 0.71 >More info WT 0h Leaf tissue Original data GEO bulk
21 TNT-seedlings 0.55 >More info 0.81 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
22 Col-0 DCA 48h 0.64 >More info 0.72 >More info Col-0 MOCK 48h Original data GEO bulk
23 P.p 10.5hai 0.68 >More info 0.67 >More info At-Control roots Original data GEO bulk
24 anac017-2 AntimycinA 3h -0.71 >More info -0.64 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
25 Col-0 V. longisporum-inoculated 48 hpi 0.67 >More info 0.67 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
26 P.p 6hai 0.68 >More info 0.65 >More info At-Control roots Original data GEO bulk
27 rosette Dark Wounded 0.65 >More info 0.68 >More info rosette Dark Control Original data GEO bulk
28 rosette Light Wounded 0.65 >More info 0.68 >More info rosette Light Control Original data GEO bulk
29 HARAP hypoxic 0.65 >More info 0.68 >More info hypoxic hypoxia Original data GEO bulk
30 protoplasts T1 [flg22] 0.65 >More info 0.67 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
31 Leaf systemic 0.61 >More info 0.70 >More info Leaf control vegetative leaf Original data GEO bulk
32 WT 2-4h Xanthomonas 0.64 >More info 0.66 >More info WT T0 Original data GEO bulk
33 WT-Dry 0.62 >More info 0.67 >More info WT-CK dehydration treatment 1h Original data
34 seedlings-week-old RECA1-overexpressing
transgenic		 0.60 >More info 0.69 >More info seedlings-week-old Col-0 seedlings Original data
35 Col-Luc WT 3h antimycin A 0.71 >More info 0.58 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
36 Light 0.63 >More info 0.65 >More info Control Original data GEO bulk
37 WT 3h -P 0.55 >More info 0.73 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
38 P.p 30hai 0.64 >More info 0.64 >More info At-Control roots Original data GEO bulk
39 ein2-1 9 hpi A. brassicicola 0.72 >More info 0.55 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
40 ex2 flu dark 8hours/30 minute light 0.55 >More info 0.72 >More info col dark 8hours/30 minute light Original data GEO bulk
41 WT AntimycinA 3h 0.65 >More info 0.62 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
42 GST NPP1 4 h (leaf) 0.65 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
43 miR393 flg22 2h 0.64 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
44 coi1-16 ein2 sid2 ozone 0.75 >More info 0.51 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
45 npr1 sni1 brca2a SA -0.66 >More info -0.60 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
46 oligomycin 4 h 0.63 >More info 0.62 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
47 AFB1 flg22 2h 0.68 >More info 0.57 >More info WT 0h Leaf tissue Original data GEO bulk
48 oas-a1.1 Cd 18h 0.56 >More info 0.68 >More info Cd 18h root Root Original data GEO bulk
49 root Dosed gold 0.63 >More info 0.61 >More info root No gold .125 mM gold 24 h roots Original data
50 Leaf wounded 0.58 >More info 0.66 >More info Leaf control vegetative leaf Original data GEO bulk
51 0.125 mM gold 24 h 0.63 >More info 0.61 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
52 Bur-0-30min IAA 0.63 >More info 0.61 >More info Bur-0h IAA whole plant Original data GEO bulk
53 dorn1-1 Root 100 mM ATP 30 min -0.50 >More info -0.73 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
54 seedling 12h after HZE WT 0.66 >More info 0.57 >More info seedling day 1 unirradiated WT 12h Original data
55 GA 0.56 >More info 0.67 >More info none GA Rosette Original data GEO bulk
56 CeO2 germinant -0.54 >More info -0.69 >More info Millipore Water germinant CeO2 seedling Original data
57 ataf1-1 mutant Col-0 Bgh inoculated 0.71 >More info 0.52 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
58 coi1-2 0.54 >More info 0.68 >More info Col-0 mock Whole seedling Original data GEO bulk
59 LTN008-2 aza-dc 0.68 >More info 0.54 >More info LTN012-2 Mock Original data
60 abi1 hypocotyl 0.53 >More info 0.69 >More info Ler hypocotyl hypocotyl Original data GEO bulk
61 Cor hrpS 10h 0.63 >More info 0.59 >More info Mock 10h Cor hrpS Original data GEO bulk
62 FLIGHT TAGESB plate6 ROOTS 0.53 >More info 0.69 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
63 WT-NOCO2 INFECTED 0.66 >More info 0.55 >More info WT-MOCK Original data GEO bulk
64 Phaseolicola 2 h (leaf) 0.54 >More info 0.66 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
65 gai Flg22 1h -0.66 >More info -0.54 >More info Laer Flg22 1h leaf discs Original data GEO bulk
66 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.70 >More info 0.50 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
67 oas-a1.1 Cd 24h 0.58 >More info 0.62 >More info Cd 24h root Shoot Original data GEO bulk
68 aba1 hypocotyl 0.58 >More info 0.62 >More info Ler hypocotyl hypocotyl Original data GEO bulk
69 atr zebularine 0.69 >More info 0.51 >More info WT zebularine shoot apical meristem Original data
70 bak1-3 +Pep2 2h 0.48 >More info 0.72 >More info WT +Pep2 2h Pep2 Original data GEO bulk
71 WT +elf18 2h 0.58 >More info 0.61 >More info WT untreated elf18 Original data GEO bulk
72 rsa3-1 Na 24h 0.53 >More info 0.66 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
73 bak1-3 +Pep2 10h 0.58 >More info 0.61 >More info WT +Pep2 10h Pep2 Original data GEO bulk
74 WT +elf18 10h 0.62 >More info 0.57 >More info WT untreated elf18 Original data GEO bulk
75 Col-0 ozone 0.70 >More info 0.49 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
76 DFPM 0.64 >More info 0.55 >More info control Original data GEO bulk
77 HARAP aerobic -0.53 >More info -0.65 >More info WT aerobic aerobic Original data GEO bulk
78 ani1 T0.5 -0.59 >More info -0.59 >More info WT T0.5 root tissue Original data GEO bulk
79 flu dark 8hours/30 minute light 0.44 >More info 0.74 >More info col dark 8hours/30 minute light Original data GEO bulk
80 AvrRpt2 Col-0 6hpi 0.68 >More info 0.49 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
81 Selenate (root) 0.63 >More info 0.54 >More info Ws (root) Original data GEO bulk
82 Root Selenate 0.63 >More info 0.54 >More info Root control 40 micromolar selenate Root Original data GEO bulk
83 CMP 4hr 0.62 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
84 C24 ozone 0.72 >More info 0.45 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
85 WT powdery mildew 0.58 >More info 0.59 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
86 9 hr Hypoxia 1 hr recovery IP RNA 0.63 >More info 0.54 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
87 R. solani AG2-1 0.56 >More info 0.60 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
88 Chitosan 3h Treatment 0.58 >More info 0.58 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
89 1h +Pi -0.47 >More info -0.69 >More info 1h -Pi root Original data GEO bulk
90 Te ozone 0.69 >More info 0.46 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
91 hrpA fliC 7h 0.51 >More info 0.64 >More info Mock 7h hrpA fliC Original data GEO bulk
92 Col0-PsmES4326-24hpi 0.54 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
93 atr mock 0.72 >More info 0.43 >More info WT mock shoot apical meristem Original data
94 irradiated leaf (WT 1d) 0.62 >More info 0.52 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
95 max4 hypocotyl 0.56 >More info 0.58 >More info wt hypocotyl hypocotyl Original data GEO bulk
96 toc1-1-57hr 0.53 >More info 0.61 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
97 Bur-0-1h IAA 0.63 >More info 0.51 >More info Bur-0h IAA whole plant Original data GEO bulk
98 coi1-16 ein2 sid2 ctrl -0.69 >More info -0.45 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
99 R. solani AG8 0.57 >More info 0.57 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
100 CT101 ozone 0.68 >More info 0.45 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
101 irradiated leaf (cmt 5d) 0.58 >More info 0.55 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
102 seedling 6h after HZE WT 0.64 >More info 0.49 >More info seedling day 1 unirradiated WT 6h Original data
103 Roots Cd -0.62 >More info -0.51 >More info Roots control Cd Root Original data GEO bulk
104 9 hr Hypoxia 1 hr recovery Total RNA 0.57 >More info 0.56 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
105 csn4-1 mutant 0.54 >More info 0.59 >More info WT dark Original data GEO bulk
106 csn5 (csn5a-2 csn5b) light 0.61 >More info 0.52 >More info WT light Original data GEO bulk
107 sid2-2 9 hpi A. brassicicola 0.66 >More info 0.47 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
108 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.67 >More info 0.45 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
109 npr1 sni1 SA 0.57 >More info 0.55 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
110 35S:RPS4 eds1-2 8h -0.60 >More info -0.52 >More info 35S:RPS4 8h leaves Original data
111 flu 0.66 >More info 0.45 >More info WT Col Original data GEO bulk
112 Salt Stress 24 h (root) 0.56 >More info 0.55 >More info Stress mock 24 h (root) Original data Stress treatments
113 Col-0-30min IAA 0.61 >More info 0.50 >More info Col-0-0h IAA whole plant Original data GEO bulk
114 WT no Pi 0.64 >More info 0.47 >More info WT complete seedlings Original data
115 GST 4 h (leaf) 0.53 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
116 WT Col-0 Bgh inoculated 0.64 >More info 0.47 >More info WT Col-0 Un-inoculated Original data GEO bulk
117 toc1-1-53hr 0.54 >More info 0.57 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
118 Elevated CO2 AMPLE N NIGHT 0.54 >More info 0.56 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
119 Dex-rga(delta17) 4h GA4+DEX -0.62 >More info -0.48 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
120 dde2-2 9 hpi A. brassicicola 0.67 >More info 0.43 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
121 ckh1 CK200 0.60 >More info 0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
122 Col-0 9 hpi A. brassicicola 0.62 >More info 0.48 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
123 ani1 T16 -0.56 >More info -0.54 >More info WT T16 root tissue Original data GEO bulk
124 A. thaliana-A. lyrata hybrid -0.52 >More info -0.58 >More info A. thaliana mature leaves before flowering Original data GEO bulk
125 efr-1 +elf18 10h -0.58 >More info -0.52 >More info WT +elf18 10h elf18 Original data GEO bulk
126 35S::ERF104 Flg22 4h 0.62 >More info 0.48 >More info 35S::ERF104 H2O 4h Original data GEO bulk
127 toc1-1-81hr 0.48 >More info 0.62 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
128 Transgenic LEC2GR Seedling 1h Dex 0.48 >More info 0.62 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
129 myb61 cork 0.49 >More info 0.61 >More info wt cork cork Original data GEO bulk
130 BLM+INA 0.46 >More info 0.64 >More info CK BLM and INA seedling Original data
131 4C 2h(SOIL) 0.54 >More info 0.55 >More info 4C 0h(SOIL) Original data GEO bulk
132 flu over-tAPX 0.64 >More info 0.45 >More info WT Col Original data GEO bulk
133 OE WRKY63.3 high light 0.46 >More info 0.63 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
134 inhibitor A Treated 0.61 >More info 0.48 >More info Negative Control Original data GEO bulk
135 del1-1 mutant 5d uninfected 0.49 >More info 0.60 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
136 protoplasts T2 [flg22] 0.51 >More info 0.57 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
137 CMV-WT 0.55 >More info 0.53 >More info Mock-At Aerial tissues Original data GEO bulk
138 Laer Flg22+GA 2h 0.63 >More info 0.45 >More info Laer Control leaf discs Original data GEO bulk
139 sdg2 0.57 >More info 0.51 >More info wt seedling Original data GEO bulk
140 Mutant siz1-3 0.55 >More info 0.53 >More info Col-0 Original data GEO bulk
141 Mutant siz1-3 (Drought) 0.59 >More info 0.49 >More info Col-0 (Drought) Original data GEO bulk
142 Col whole leaf 7dpi 0.62 >More info 0.46 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
143 hrcC 0.57 >More info 0.51 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
144 siz1-3 control 0.55 >More info 0.53 >More info Col-0 control Original data GEO bulk
145 siz1-3 drought 0.59 >More info 0.49 >More info Col-0 drought Original data GEO bulk
146 SA 0.46 >More info 0.62 >More info WT mock Whole seedling Original data GEO bulk
147 amiRAP aerobic -0.46 >More info -0.62 >More info WT aerobic aerobic Original data GEO bulk
148 AtLysM RLK1 mutant water 0.43 >More info 0.65 >More info WT water Original data GEO bulk
149 Col-0 Root 100 mM ATP 30 min 0.49 >More info 0.59 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
150 hira-root -0.47 >More info -0.61 >More info WT-root root Original data
151 Leafminer damaged seedlings 0.51 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
152 root protoplasts 40 mM NaCl 0.55 >More info 0.52 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
153 WT NAA/flg 2h 0.61 >More info 0.46 >More info WT 0h Leaf tissue Original data GEO bulk
154 WT+H2O2 0.55 >More info 0.52 >More info WT H2O2 Original data GEO bulk
155 col-5 DC3000-avrRpm 4h 0.54 >More info 0.53 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
156 S58-2 0.44 >More info 0.63 >More info wt Original data GEO bulk
157 Rose Bengal 0.5 uM 0.53 >More info 0.53 >More info Control RB and PER Rose Bengal Original data
158 Col-0 INA 48h 0.52 >More info 0.54 >More info Col-0 MOCK 48h Original data GEO bulk
159 smg7b-1 0.52 >More info 0.54 >More info WT whole plant Original data GEO bulk
160 seedling 3h after Gamma WT 0.58 >More info 0.48 >More info seedling day 1 unirradiated WT 3h Original data
161 cop1 Seedling BL+ABA 0.51 >More info 0.55 >More info WT Seedling BL+ABA Original data GEO bulk
162 WT +Pep2 2h 0.71 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
163 hrpA 7h 0.54 >More info 0.52 >More info Mock 7h hrpA Original data GEO bulk
164 WT 6H Cold 0.56 >More info 0.50 >More info WT control Original data GEO bulk
165 ice1 control 0.52 >More info 0.53 >More info WT control Original data GEO bulk
166 Col-0 WT HL 3h 0.56 >More info 0.49 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
167 E.coli TUV86 2 fliC 7h 0.55 >More info 0.50 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
168 Infected pft1 leaf 0.51 >More info 0.54 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
169 Bur-0-3h IAA 0.61 >More info 0.44 >More info Bur-0h IAA whole plant Original data GEO bulk
170 Whole root - low pH 12H 0.45 >More info 0.60 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
171 bHLH122 ox -0.44 >More info -0.61 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
172 vtc1 (II) 0.58 >More info 0.47 >More info Col (II) rosette Original data GEO bulk
173 (Col-0)+200 uM As 0.52 >More info 0.52 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
174 sid2-1 cold -0.56 >More info -0.48 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
175 toc1-1-85hr 0.45 >More info 0.59 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
176 csn5 (csn5a-2 csn5b) dark 0.46 >More info 0.58 >More info WT dark Original data GEO bulk
177 root endodermis -S -0.52 >More info -0.51 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
178 col-5 hrpA 12h 0.55 >More info 0.48 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
179 5-Triiodobenzoic acid3 h 0.54 >More info 0.49 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
180 bZIP1ko mutant N+Light- 0.55 >More info 0.48 >More info WT-sib N+Light- whole plant Original data GEO bulk
181 B.cinerea 18 h infection 0.48 >More info 0.55 >More info Mock 18 h Original data Botrytis cinerea infection
182 gpa1 -ABA GC -0.45 >More info -0.58 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
183 Botrytis cinerea 18h 0.48 >More info 0.55 >More info control 18h Original data GEO bulk
184 csn3-1 light 0.53 >More info 0.49 >More info WT light Original data GEO bulk
185 Col upon hypoxia 6 hrs 0.53 >More info 0.49 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
186 Dex-rga(delta17) 2h GA4+DEX -0.59 >More info -0.43 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
187 (Col-0)+100 uM As 0.53 >More info 0.49 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
188 WT-SA 0.56 >More info 0.46 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
189 Col-0-avrB-6h 0.55 >More info 0.47 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
190 Col-0 Flg22 4h 0.43 >More info 0.59 >More info Col-0 H2O 4h Original data GEO bulk
191 phyB mutant 22C 10hrs -0.39 >More info -0.63 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
192 oligomycin 1 h 0.42 >More info 0.60 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
193 CDB1-Knockout -0.37 >More info -0.65 >More info WT Original data GEO bulk
194 cop1 Seedling BL 0.41 >More info 0.61 >More info WT Seedling BL Original data GEO bulk
195 gai MeJA 1h -0.58 >More info -0.43 >More info Laer MeJA 1h leaf discs Original data GEO bulk
196 msh1 albino 0.61 >More info 0.40 >More info WT aerial part Original data GEO bulk
197 GO5; 8h switch to ambient CO2 concentrations; 0.58 >More info 0.43 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
198 vte2 leaves 48h LT 0.52 >More info 0.49 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
199 Mutant cry1 (High Light) -0.46 >More info -0.55 >More info Col-0 (High Light) Original data GEO bulk
200 Laer pretreat GA Flg22 1h 0.30 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
201 +1.6 mM Tween 20 1 h. 0.47 >More info 0.54 >More info +distilled water 1 h. Original data GEO bulk
202 cry1 high light -0.46 >More info -0.55 >More info Col-O high light Original data GEO bulk
203 Laer pretreat JA Flg22 1h 0.68 >More info 0.32 >More info Laer pretreat water control leaf discs Original data GEO bulk
204 Col-0-3h IAA 0.61 >More info 0.39 >More info Col-0-0h IAA whole plant Original data GEO bulk
205 WT 90-105 min Xanthomonas 0.50 >More info 0.50 >More info WT T0 Original data GEO bulk
206 HopZ1a treated 0.54 >More info 0.46 >More info col Original data GEO bulk
207 tunicamycin -0.40 >More info -0.60 >More info DMF Original data GEO bulk
208 ckh1 CK25 0.45 >More info 0.55 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
209 bbx24 in Simulated Shade -0.45 >More info -0.55 >More info WT in simulated shade shade seedling Original data
210 cpr5scv1 0.56 >More info 0.43 >More info WT(COL) Original data GEO bulk
211 seedlings +5AC 0.56 >More info 0.43 >More info control seedlings 10-day old whole seedling Original data GEO bulk
212 anac017-1 H2O2 3h -0.62 >More info -0.37 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
213 Col-0-1h IAA 0.57 >More info 0.42 >More info Col-0-0h IAA whole plant Original data GEO bulk
214 seedling 1.5h after Gamma WT 0.52 >More info 0.47 >More info seedling day 1 unirradiated WT 1.5h Original data
215 Wounding Stress3 h (shoot) 0.49 >More info 0.50 >More info Stress mock 3 h (shoot) Original data Stress treatments
216 AvrRpm1 2 h (leaf) 0.46 >More info 0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
217 mpk6-ko Flg22 4h 0.49 >More info 0.50 >More info mpk6-ko H2O 4h Original data GEO bulk
218 4C 1h 0.34 >More info 0.65 >More info 4C 0h Original data GEO bulk
219 Rsch 8h 0.43 >More info 0.56 >More info Rsch CA Leaves Original data
220 IAA/inhibitor A Treated 0.58 >More info 0.40 >More info IAA Treated Original data GEO bulk
221 toc1-1-77hr 0.59 >More info 0.39 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
222 46T-Dry 0.53 >More info 0.45 >More info WT-Dry dehydration treatment 1h Original data
223 Col whole leaf 5dpi 0.50 >More info 0.48 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
224 IAA/inhibitor B Treated 0.46 >More info 0.52 >More info IAA Treated Original data GEO bulk
225 aba3-1 0.44 >More info 0.54 >More info wt Original data GEO bulk
226 npr1-1 SA -0.53 >More info -0.44 >More info Col-0 SA complete seedling Original data
227 WT seedlings MV 0.59 >More info 0.38 >More info WT seedlings control Seedlings Original data GEO bulk
228 Primisulfuron EC50 0.60 >More info 0.37 >More info Carrier (primisulfuron) Original data GEO bulk
229 bio4-1 mutant leaves 0.55 >More info 0.42 >More info WT leaves leaves Original data GEO bulk
230 cpr5 0.51 >More info 0.46 >More info WT seedling Original data GEO bulk
231 12m.KCl 0.40 >More info 0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
232 wavy 0.40 >More info 0.56 >More info WT Original data GEO bulk
233 2hr continuous KCl and MSX control PeR cell 0.50 >More info 0.46 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
234 SCR-GR Time 1H Dex 0.43 >More info 0.53 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
235 pXVE:HA-EDM2-a untreated -0.45 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
236 toc1-1-49hr 0.56 >More info 0.39 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
237 ein5-1 ski2-3 0.56 >More info 0.39 >More info Col-0 aerial tissue Original data
238 6h +Pi -0.39 >More info -0.56 >More info 6h -Pi root Original data GEO bulk
239 csn3-1 dark 0.40 >More info 0.55 >More info WT dark Original data GEO bulk
240 9 hr Hypoxia IP RNA 0.53 >More info 0.42 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
241 atgsnor1-1 -0.50 >More info -0.45 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
242 Cor 24h 0.60 >More info 0.35 >More info Mock 24h Cor Original data GEO bulk
243 cpr5npr1svi1 0.50 >More info 0.45 >More info WT(COL) Original data GEO bulk
244 WT resupplied Pi 4h 0.53 >More info 0.42 >More info WT complete seedlings Original data
245 WT +Pep2 10h 0.51 >More info 0.44 >More info WT untreated Pep2 Original data GEO bulk
246 WT 30μM arsenate 8 hours. 0.50 >More info 0.45 >More info WT control (not supplemented). Original data
247 Cold Stress 24 h (root) 0.51 >More info 0.44 >More info Stress mock 24 h (root) Original data Stress treatments
248 sid2 -0.42 >More info -0.53 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
249 afb3-1 2h KNO3 0.22 >More info 0.73 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
250 sni1 0.44 >More info 0.51 >More info WT Original data GEO bulk
251 S15-118 0.44 >More info 0.51 >More info wt Original data GEO bulk
252 Cocultivation 8 hrs root 0.43 >More info 0.52 >More info Mock cocultivation 8 hrs root Root Original data
253 Mutant sav3-2 (WL) 0.38 >More info 0.56 >More info Col-0 (WL) Original data GEO bulk
254 sav3-2 light 0.38 >More info 0.56 >More info Col-0 light seedlings Original data GEO bulk
255 stn7-1 -0.52 >More info -0.42 >More info Col-0 rosette leaves Original data GEO bulk
256 shoots bhlh100/101 100uM Fe 0.52 >More info 0.42 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
257 MG132 3 h 0.36 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
258 Whole root - low pH 24H 0.44 >More info 0.50 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
259 mtf1-1 -0.42 >More info -0.52 >More info Col0 root Original data
260 wrky33 Bc inoculation 14h 0.67 >More info 0.26 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
261 Sulfometuron EC50 0.59 >More info 0.34 >More info Carrier Original data GEO bulk
262 Protoplast Induced 0.35 >More info 0.58 >More info Uninduced Original data GEO bulk
263 estradiole-induced ANAC059 0.34 >More info 0.59 >More info transgenic (empty vector inducible system) Original data GEO bulk
264 Col-0 wt Hypoxic 0.41 >More info 0.52 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
265 cat2-long-day 2d -0.52 >More info -0.40 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
266 S14-150 0.33 >More info 0.59 >More info wt Original data GEO bulk
267 Cor 10h 0.51 >More info 0.40 >More info Mock 10h Cor Original data GEO bulk
268 dcl1-7 0.53 >More info 0.38 >More info Ler Original data GEO bulk
269 wnk8-2 untreated -0.40 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
270 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
271 leaf13 0.36 >More info 0.55 >More info unwounded leaves none Original data GEO bulk
272 Mutant ga1-5 -0.41 >More info -0.50 >More info Ler-1 Original data Comparison of plant hormone related mutant
273 wnk8-1 untreated -0.41 >More info -0.50 >More info Col-0 untreated seedlings Original data GEO bulk
274 ice1 6H Cold 0.41 >More info 0.50 >More info WT 6H Cold Original data GEO bulk
275 upf1 0.51 >More info 0.39 >More info WT whole plant Original data GEO bulk
276 E.coli 0157 H7 7h 0.53 >More info 0.37 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
277 seedling 24h after Gamma WT 0.51 >More info 0.39 >More info seedling day 2 unirradiated WT 24h Original data
278 Cd 24h root -0.53 >More info -0.37 >More info WT-Untreated Shoot Original data GEO bulk
279 C24-3h IAA 0.50 >More info 0.40 >More info C24-0h IAA whole plant Original data GEO bulk
280 arf2 brz -0.50 >More info -0.40 >More info arf2 mock Original data GEO bulk
281 pad4-PsmES4326-24hpi -0.59 >More info -0.31 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
282 Laer Flg22 2h 0.59 >More info 0.31 >More info Laer Control leaf discs Original data GEO bulk
283 Triazolopyrimidine EC50 0.57 >More info 0.33 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
284 atmyc2 cop1 Seedling BL 0.33 >More info 0.57 >More info WT Seedling BL Original data GEO bulk
285 WT Bc inoculation 14h 0.62 >More info 0.27 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
286 WT mitomycin C 0.50 >More info 0.39 >More info WT mock shoot apical meristem Original data
287 root cells endodermis 140mM NaCl 8 hours 0.50 >More info 0.39 >More info root cells endodermis standard 1 hour root cells endodermis Original data
288 vte2-1 3d vernalization 0.53 >More info 0.36 >More info WT 3d vernalization Original data GEO bulk
289 bio4-1 mutant watered00µM biotin leaves -0.50 >More info -0.39 >More info bio4-1 mutant leaves leaves Original data GEO bulk
290 Ts5 roots 2hr KCl control 0.51 >More info 0.38 >More info Col0 roots 2hr KCl control root Original data GEO bulk
291 TA induced 0.37 >More info 0.52 >More info Methanol TA Suspension cells Original data GEO bulk
292 Whole root - low pH 6H 0.32 >More info 0.56 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
293 toc1-1-65hr 0.51 >More info 0.37 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
294 Octopus overexpressor 35SDYG25 0.26 >More info 0.62 >More info WS Original data GEO bulk
295 Shoot -Cs 0.38 >More info 0.50 >More info Control-shoot Original data GEO bulk
296 Col BTH 0.21 >More info 0.67 >More info Col rosettes Original data GEO bulk
297 Blue Light 4 h 0.31 >More info 0.57 >More info White Light 4 h Original data Light treatments
298 hst5 0.54 >More info 0.33 >More info Col-0 Original data GEO bulk
299 Col leaves 48h LT 0.53 >More info 0.34 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
300 INA 0.30 >More info 0.57 >More info CK INA seedling Original data
301 pnp1-1 1wk -P 0.56 >More info 0.30 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
302 35S:RPS4 eds1-2 24h -0.51 >More info -0.35 >More info 35S:RPS4 24h leaves Original data
303 Lipopolysaccaride4 h (leaf) 0.50 >More info 0.36 >More info Mock 4 h (leaf) Original data Elicitor treatments
304 IAA7mII over-expressor IAA Treated 0.17 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
305 oxt6 mutant -0.35 >More info -0.51 >More info WT Original data GEO bulk
306 Col in Pi deficiency medium 0.29 >More info 0.57 >More info Col in control medium root Original data GEO bulk
307 Leafminer locally damaged thaliana seedlings 0.51 >More info 0.34 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
308 seedling 24h after HZE WT 0.52 >More info 0.33 >More info seedling day 2 unirradiated WT 24h Original data
309 dense canopy 0.28 >More info 0.57 >More info single (control) petiole Original data GEO bulk
310 opr3 OPDA 0.5 h 0.23 >More info 0.62 >More info opr3 0 h Original data GEO bulk
311 ahg2-1sid2-2 0.33 >More info 0.51 >More info WT (Col) control Original data GEO bulk
312 IXB induced 0.34 >More info 0.50 >More info Methanol IXB Suspension cells Original data GEO bulk
313 cys-c1 root -0.58 >More info -0.26 >More info Root-WT roots Original data GEO bulk
314 P35S:rGRF3 0.52 >More info 0.31 >More info WS Original data GEO bulk
315 ataf1-1 mutant Col-0 Un-inoculated -0.53 >More info -0.29 >More info WT Col-0 Un-inoculated Original data GEO bulk
316 C24-1h IAA 0.51 >More info 0.31 >More info C24-0h IAA whole plant Original data GEO bulk
317 dicamba 0.30 >More info 0.52 >More info WT mock whole seedling Original data GEO bulk
318 root longitudinal zone-4 pH 4.6 0.32 >More info 0.50 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
319 cpr5npr1 0.50 >More info 0.31 >More info WT(COL) Original data GEO bulk
320 FarRed Light 4 h 0.21 >More info 0.60 >More info White Light 4 h Original data Light treatments
321 vtc2-1 -0.56 >More info -0.24 >More info Col-0 whole plant Original data GEO bulk
322 atr mitomycin C 0.51 >More info 0.29 >More info WT mitomycin C shoot apical meristem Original data
323 erf104-ko Flg22 4h 0.29 >More info 0.51 >More info erf104-ko H2O 4h Original data GEO bulk
324 tmm1-inflorescence-tips 0.24 >More info 0.56 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
325 BLM 0.28 >More info 0.52 >More info CK BLM seedling Original data
326 Mutant sav3-2 (SH) 0.20 >More info 0.59 >More info Col-0 (SH) Original data GEO bulk
327 whole roots -Fe 6 hour 0.28 >More info 0.51 >More info whole roots standard Original data GEO bulk
328 phyB mutant 22C 4hrs -0.27 >More info -0.52 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
329 sav3-2 shade 0.20 >More info 0.59 >More info Col-0 shade seedlings Original data GEO bulk
330 Red Light 45min -0.22 >More info -0.57 >More info White Light 45min Original data Light treatments
331 penta MeJA 1h 0.55 >More info 0.22 >More info Laer MeJA 1h leaf discs Original data GEO bulk
332 cdpk6-yfp 0.59 >More info 0.18 >More info Kan seedlings Original data GEO bulk
333 iae1 -0.26 >More info -0.51 >More info B179 Original data GEO bulk
334 phr1 Shoot-Pi 0.18 >More info 0.58 >More info WT Root-Pi shoots Original data GEO bulk
335 Root wt CLE10 0.10 >More info 0.66 >More info Root wt CLE25 root tip Original data GEO bulk
336 Imidazolinone EC50 0.55 >More info 0.20 >More info Carrier (Imidazolinone) Original data GEO bulk
337 anac017-2 H2O2 3h -0.56 >More info -0.19 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
338 irradiated leaf (cmt 1d) 0.50 >More info 0.24 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
339 penta Pst DC3000 12hpi 0.51 >More info 0.23 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
340 IRP1-OE-Fe--shoot 0.50 >More info 0.24 >More info COL-0-Fe--shoot shoot Original data
341 elf3-7-16ºC 0.22 >More info 0.51 >More info WT-16ºC Original data GEO bulk
342 Mutant axr3-1 0.19 >More info 0.53 >More info Col Original data GEO bulk
343 siliques AtHb1 control 0.19 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
344 gpa1-4/agb1-2 clean-air 3h -0.14 >More info -0.57 >More info Col clean-air 3h clean-air Original data GEO bulk
345 BAM7-Cat Ox untreated 0.17 >More info 0.53 >More info WT untreated none shoot Original data
346 npr1-3 MOCK 48h -0.53 >More info -0.16 >More info Col-0 MOCK 48h Original data GEO bulk
347 FarRed Light 45min -0.03 >More info -0.66 >More info White Light 45min Original data Light treatments
348 WT roots - Fe 0.52 >More info 0.16 >More info WT roots + Fe Roots Original data GEO bulk
349 long 17-degree- 0.17 >More info 0.51 >More info control long Original data GEO bulk
350 ATR1 OE -0.50 >More info -0.17 >More info WT for ATR1/MYB51 Original data GEO bulk
351 CCA14 dark late -0.10 >More info -0.57 >More info Col dark late Original data GEO bulk
352 SA 4mM 0.55 >More info 0.09 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
353 bri1-116 -0.09 >More info 0.73 >More info Col seedling Original data GEO bulk
354 cpctry 0.13 >More info 0.51 >More info Col Original data GEO bulk
355 HairpinZ 4 h (leaf) 0.65 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
356 polysome mRNA eif3k 0.01 >More info -0.63 >More info polysome mRNA WT aerial part Original data GEO bulk
357 Laer pretreat GA+JA Flg22 0h 0.53 >More info 0.08 >More info Laer pretreat water control leaf discs Original data GEO bulk
358 rao2 H2O2 3h -0.50 >More info -0.10 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
359 gpa1-4/agb1-2 ozone 2d 0.05 >More info -0.64 >More info Col ozone 2d ozone Original data GEO bulk
360 Dark 4 h pls RedLight 1min 0.08 >More info 0.50 >More info Dark 4 h Original data Light treatments
361 Red/FR Light 4 h -0.07 >More info -0.50 >More info FarRed Light 4 h Original data Light treatments
362 Laer pretreat GA Flg22 0h 0.58 >More info -0.02 >More info Laer pretreat water control leaf discs Original data GEO bulk
363 WT Atum 1h 0.00 >More info -0.55 >More info WT 0h Leaf tissue Original data GEO bulk
364 phr1 phl1 Root-Pi -0.02 >More info -0.50 >More info WT Shoot+Pi roots Original data GEO bulk
365 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
366 30m light -0.01 >More info 0.52 >More info before light whole seedlings Original data GEO bulk
367 upb1-1 elongation zone -0.01 >More info -0.50 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
368 seed germinating in countinuous light 24h SL -0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
369 Shoot apex inflorescence (after bolting) -0.17 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
370 CLO 4mM 0.52 >More info -0.05 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
371 Laer pretreat JA Flg22 2h 0.53 >More info -0.06 >More info Laer pretreat water control leaf discs Original data GEO bulk
372 Hydrogen Peroxide 500 uM 0.53 >More info -0.06 >More info Control RB and PER Hydrogen Peroxide Original data
373 Polysomal RNA 35S:AtCSP1-FH1 cold 0.10 >More info -0.56 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
374 P. infestans 6 h (leaf) 0.60 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
375 Col PSTDC3000 24h 0.52 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
376 35S:miR396 0.11 >More info -0.50 >More info WT 0 days-old seedlings. Original data GEO bulk
377 spx1 spx2 resupplied Pi 4h -0.59 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
378 pif4pif5 mut dark -0.23 >More info 0.55 >More info WT dark Original data GEO bulk
379 cat2-2; 8h switch to ambient CO2 concentrations; 0.34 >More info -0.58 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
380 P.syringae vir 4 h (leaf) 0.28 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments