4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Elevated CO2 AMPLE N DAY
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Score Experiment Correlation from
Elevated CO2 AMPLE N DAY		 Correlation to
Elevated CO2 AMPLE N DAY		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Elevated CO2 AMPLE N DAY 1.00 >More info 1.00 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
2 S58-2 0.88 >More info 0.86 >More info wt Original data GEO bulk
3 ceh1 mutant 0.88 >More info 0.83 >More info Parent line Original data
4 aba3-1 0.86 >More info 0.84 >More info wt Original data GEO bulk
5 sni1 0.84 >More info 0.85 >More info WT Original data GEO bulk
6 edr1 18 h powdery mildew 0.87 >More info 0.81 >More info Col-0 18 h powdery mildew Original data GEO bulk
7 Elevated CO2 AMPLE N NIGHT 0.86 >More info 0.80 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
8 Col-0 INA 48h 0.84 >More info 0.80 >More info Col-0 MOCK 48h Original data GEO bulk
9 cpr5scv1 0.85 >More info 0.79 >More info WT(COL) Original data GEO bulk
10 smg7b-1 0.86 >More info 0.78 >More info WT whole plant Original data GEO bulk
11 vtc2 (I) 0.88 >More info 0.76 >More info Col (I) rosette Original data GEO bulk
12 UV Stress 24 h (shoot) 0.81 >More info 0.83 >More info Stress mock 24 h (shoot) Original data Stress treatments
13 sid2-1 cold -0.80 >More info -0.81 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
14 Col whole leaf 7dpi 0.81 >More info 0.79 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
15 WT powdery mildew 0.80 >More info 0.80 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
16 S15-118 0.85 >More info 0.75 >More info wt Original data GEO bulk
17 Col-0 48 hpi 0.80 >More info 0.79 >More info Col-0 uninoculated Original data GEO bulk
18 cpr5 0.83 >More info 0.76 >More info WT(COL) Original data GEO bulk
19 mkk1/mkk2 control rep 0.86 >More info 0.73 >More info Col-0 Time 0 rep Original data GEO bulk
20 abi4 vtc2 (I) 0.83 >More info 0.76 >More info Col (I) rosette Original data GEO bulk
21 sid2 -0.79 >More info -0.79 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
22 camta1/3 warm 0.79 >More info 0.79 >More info WT warm entire aerial part Original data GEO bulk
23 cpr5npr1svi1 0.80 >More info 0.78 >More info WT(COL) Original data GEO bulk
24 cpr5 0.83 >More info 0.75 >More info WT seedling Original data GEO bulk
25 pvip1 pvip2 0.85 >More info 0.73 >More info Col-0 whole rosettes Original data GEO bulk
26 ice1 control 0.81 >More info 0.76 >More info WT control Original data GEO bulk
27 del1-1 mutant 5d uninfected 0.81 >More info 0.76 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
28 Col whole leaf 5dpi 0.81 >More info 0.76 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
29 RPL18 TuMV inoculated total RNA 0.83 >More info 0.74 >More info mock inoculated total RNA PO Original data GEO bulk
30 OH1 0.83 >More info 0.74 >More info Col-0 leaves Original data GEO bulk
31 RPL18 TuMV inoculated polysomal RNA 0.81 >More info 0.74 >More info mock inoculated polysomal RNA PO Original data GEO bulk
32 CMV-WT 0.78 >More info 0.77 >More info Mock-At Aerial tissues Original data GEO bulk
33 gh3.5-1D 48 hpi 0.81 >More info 0.74 >More info Col-0 uninoculated Original data GEO bulk
34 Col ozone 2d 0.77 >More info 0.78 >More info Col clean-air 2d ozone Original data GEO bulk
35 pmr5 pmr6 0.82 >More info 0.73 >More info Col-0 Original data GEO bulk
36 pmr5 0.80 >More info 0.74 >More info Col-0 Original data GEO bulk
37 Ambient CO2 LIMITING N DAY 0.78 >More info 0.76 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
38 ataf1-1 mutant Col-0 Bgh inoculated 0.82 >More info 0.72 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
39 CLO 4mM 0.81 >More info 0.72 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
40 camta3-2 0.77 >More info 0.76 >More info WT Original data GEO bulk
41 Col-0 INA 6d 0.79 >More info 0.74 >More info Col-0 MOCK 6d Original data GEO bulk
42 WT-SA 0.78 >More info 0.75 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
43 edr1 36 h powdery mildew 0.81 >More info 0.72 >More info Col-0 36 h powdery mildew Original data GEO bulk
44 Elevated CO2 fully expanded leaf 0.84 >More info 0.69 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
45 Mutant siz1-3 0.82 >More info 0.70 >More info Col-0 Original data GEO bulk
46 siz1-3 control 0.82 >More info 0.70 >More info Col-0 control Original data GEO bulk
47 myb3 myb3r4d 0.72 >More info 0.80 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
48 eds16 whole leaf 5dpi -0.71 >More info -0.80 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
49 cpr5npr1 0.81 >More info 0.69 >More info WT(COL) Original data GEO bulk
50 cs26 short-day -0.78 >More info -0.72 >More info Leaves-WT-SD leaf Original data GEO bulk
51 SLWF infested 0.78 >More info 0.72 >More info SLWF uninfested rosette tissue Original data GEO bulk
52 ice1 6H Cold 0.80 >More info 0.69 >More info WT 6H Cold Original data GEO bulk
53 A. thaliana-A. lyrata hybrid -0.77 >More info -0.72 >More info A. thaliana mature leaves before flowering Original data GEO bulk
54 gh3.5D uninoculated -0.71 >More info -0.77 >More info Col-0 48 hpi Original data GEO bulk
55 B.cinerea 18 h infection 0.74 >More info 0.74 >More info Mock 18 h Original data Botrytis cinerea infection
56 HopZ1a treated 0.77 >More info 0.71 >More info col Original data GEO bulk
57 Botrytis cinerea 18h 0.74 >More info 0.74 >More info control 18h Original data GEO bulk
58 WT-NOCO2 INFECTED 0.79 >More info 0.68 >More info WT-MOCK Original data GEO bulk
59 DC3000 24h 0.79 >More info 0.68 >More info Mock 24h DC3000 Original data GEO bulk
60 35S:RPS4 eds1-2 24h -0.78 >More info -0.69 >More info 35S:RPS4 24h leaves Original data
61 Col-0 DCA 48h 0.75 >More info 0.71 >More info Col-0 MOCK 48h Original data GEO bulk
62 IMI 4mM 0.82 >More info 0.64 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
63 Cor 24h 0.68 >More info 0.77 >More info Mock 24h Cor Original data GEO bulk
64 wavy 0.70 >More info 0.74 >More info WT Original data GEO bulk
65 PAHs stress 0.80 >More info 0.64 >More info exp control phenanthrene whole plants Original data GEO bulk
66 Leafminer locally damaged thaliana seedlings 0.77 >More info 0.66 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
67 Col BTH 0.76 >More info 0.67 >More info Col rosettes Original data GEO bulk
68 bio4-1 mutant leaves 0.76 >More info 0.67 >More info WT leaves leaves Original data GEO bulk
69 HopZ1a treated ulp1c ulp1d 0.75 >More info 0.68 >More info col Original data GEO bulk
70 vtc1 (II) 0.79 >More info 0.64 >More info Col (II) rosette Original data GEO bulk
71 Shoot -Cs 0.68 >More info 0.74 >More info Control-shoot Original data GEO bulk
72 toc1-1-49hr 0.78 >More info 0.64 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
73 ein2-1 9 hpi A. brassicicola 0.77 >More info 0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
74 apk1 apk2 0.77 >More info 0.65 >More info Col0-control whole rosette Original data GEO bulk
75 eds16 whole leaf 6hpi -0.74 >More info -0.67 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
76 cs26 long day 0.77 >More info 0.64 >More info Leaves-WT-LD leaf Original data GEO bulk
77 camta2/3 warm 0.77 >More info 0.63 >More info WT warm entire aerial part Original data GEO bulk
78 abh1 -ABA 0.75 >More info 0.65 >More info Col-0 -ABA Original data GEO bulk
79 35S:RPS4 eds1-2 8h -0.74 >More info -0.65 >More info 35S:RPS4 8h leaves Original data
80 camta3-1 0.77 >More info 0.61 >More info WT Original data GEO bulk
81 del1-1 5dpi 0.83 >More info 0.55 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
82 ice1 24H Cold 0.73 >More info 0.65 >More info WT 24H Cold Original data GEO bulk
83 cat2-hCO2 -0.79 >More info -0.59 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
84 pepr1-1 Pepr2-3 +Pep2 10h -0.81 >More info -0.57 >More info WT +Pep2 10h Pep2 Original data GEO bulk
85 Elevated CO2 expanding leaf 0.82 >More info 0.56 >More info Ambient CO2 expanding leaf expanding leaf Original data
86 bZIP1ko mutant N+Light- 0.66 >More info 0.72 >More info WT-sib N+Light- whole plant Original data GEO bulk
87 coi1-16 ein2 sid2 ctrl -0.82 >More info -0.56 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
88 WT cold 0.77 >More info 0.60 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
89 Time-0 chr11-1chr17-1 -0.80 >More info -0.57 >More info Time-0 Col-0 leaf explants Original data
90 Tsu -Fe 48h Shoots 0.77 >More info 0.60 >More info Tsu +Fe 24h Shoots Original data GEO bulk
91 LTN008-2 aza-dc 0.81 >More info 0.55 >More info LTN012-2 Mock Original data
92 WT +Pep2 10h 0.81 >More info 0.55 >More info WT untreated Pep2 Original data GEO bulk
93 ice1 3H Cold 0.76 >More info 0.60 >More info WT 3H Cold Original data GEO bulk
94 atgsnor1-1 -0.77 >More info -0.59 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
95 WT +elf18 10h 0.75 >More info 0.61 >More info WT untreated elf18 Original data GEO bulk
96 Col laser microdissected 5 dpi 0.72 >More info 0.64 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
97 seedlings-week-old RECA1-overexpressing
transgenic		 0.77 >More info 0.59 >More info seedlings-week-old Col-0 seedlings Original data
98 OE WRKY63.3 high light 0.71 >More info 0.65 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
99 phyB mutant 22C 10hrs -0.62 >More info -0.74 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
100 abi4-102 (I) 0.76 >More info 0.59 >More info Col (I) rosette Original data GEO bulk
101 msh1 albino 0.74 >More info 0.61 >More info WT aerial part Original data GEO bulk
102 eds16 whole leaf 0h UI -0.66 >More info -0.69 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
103 eds16 whole leaf 7dpi -0.64 >More info -0.71 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
104 AvrRpt2 Col-0 6hpi 0.73 >More info 0.61 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
105 GST NPP1 4 h (leaf) 0.73 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
106 downy mildew cotyledons late stage 0.75 >More info 0.59 >More info mock inoculated Cotyledons Original data GEO bulk
107 Col-0 9 hpi A. brassicicola 0.70 >More info 0.64 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
108 npr1 sni1 SA 0.74 >More info 0.60 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
109 Osmotic Stress 24 h (shoot) 0.76 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
110 A6 mutant 0.69 >More info 0.64 >More info WT rosette leaves Rosette leaves Original data GEO bulk
111 Leafminer damaged seedlings 0.77 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
112 20d after anthesis 0.74 >More info 0.59 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
113 Mutant siz1-3 (Drought) 0.74 >More info 0.59 >More info Col-0 (Drought) Original data GEO bulk
114 Te ozone 0.80 >More info 0.53 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
115 BLM+INA 0.73 >More info 0.60 >More info CK BLM and INA seedling Original data
116 efr-1 +elf18 10h -0.73 >More info -0.60 >More info WT +elf18 10h elf18 Original data GEO bulk
117 bHLH122 ox -0.69 >More info -0.64 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
118 siz1-3 drought 0.74 >More info 0.59 >More info Col-0 drought Original data GEO bulk
119 upf3 0.72 >More info 0.61 >More info WT whole plant Original data GEO bulk
120 Col leaves 48h LT 0.77 >More info 0.55 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
121 pepr1-1 Pepr2-3 +Pep2 2h -0.67 >More info -0.65 >More info WT +Pep2 2h Pep2 Original data GEO bulk
122 ERF96OE 0.56 >More info 0.76 >More info WT leaf Original data
123 Heat shock optimum 0.67 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
124 rsa3-1 Na 24h 0.60 >More info 0.72 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
125 camta1/2/3 warm 0.72 >More info 0.60 >More info WT warm entire aerial part Original data GEO bulk
126 Col0-PsmES4326-24hpi 0.71 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
127 8h-DC3000 avrRpm1 0.69 >More info 0.63 >More info 8h-DC3000 leaves Original data GEO bulk
128 oas-a1.1 Cd 18h 0.67 >More info 0.64 >More info Cd 18h root Root Original data GEO bulk
129 Pto inoculated 0.70 >More info 0.61 >More info col Original data GEO bulk
130 total mRNA eif3k 0.75 >More info 0.56 >More info total mRNA WT aerial part Original data GEO bulk
131 Botrytis cinerea 48h 0.66 >More info 0.65 >More info control 48h Original data GEO bulk
132 psae1-3 -0.71 >More info -0.60 >More info WS rosette leaves Original data GEO bulk
133 D2O 0.74 >More info 0.57 >More info H2O seedling Original data GEO bulk
134 Col whole leaf amplified 5 dpi 0.62 >More info 0.69 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
135 CAX1/CAX3 mutant 0.67 >More info 0.63 >More info Col whole plant Original data GEO bulk
136 npr1-3 DCA 48h 0.62 >More info 0.68 >More info npr1-3 MOCK 48h Original data GEO bulk
137 Imidazolinone EC50 0.73 >More info 0.57 >More info Carrier (Imidazolinone) Original data GEO bulk
138 wrky33 Bc inoculation 14h 0.83 >More info 0.47 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
139 Cor hrpS 10h 0.69 >More info 0.61 >More info Mock 10h Cor hrpS Original data GEO bulk
140 Atss3 Light4 -0.73 >More info -0.56 >More info Atss3 Dark0.5 Original data GEO bulk
141 lht1 untreated 0.72 >More info 0.57 >More info WT untreated untreated leaf Original data GEO bulk
142 AgNO3 3 h 0.72 >More info 0.57 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
143 Shoot -K 0.60 >More info 0.69 >More info Control-shoot Original data GEO bulk
144 K starvation (shoot) 0.60 >More info 0.69 >More info Ws (shoot) Original data GEO bulk
145 Primisulfuron EC50 0.73 >More info 0.55 >More info Carrier (primisulfuron) Original data GEO bulk
146 edr1 0 h powdery mildew 0.77 >More info 0.51 >More info Col-0 0 h powdery mildew Original data GEO bulk
147 Light 3day wt -0.74 >More info -0.54 >More info 0h wt Original data
148 SA 4mM 0.79 >More info 0.49 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
149 flu 0.70 >More info 0.58 >More info WT Col Original data GEO bulk
150 mbd6 mutant thaliana 10-day-old seedling 0.70 >More info 0.58 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
151 rosette leaves fdh 0.69 >More info 0.58 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
152 smg5-2 0.70 >More info 0.57 >More info WT whole plant Original data GEO bulk
153 eds16 whole leaf 3dpi -0.69 >More info -0.58 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
154 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.73 >More info 0.54 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
155 hrcC 0.69 >More info 0.58 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
156 Mutant coi1(leaf) -0.59 >More info -0.68 >More info Col-0 (leaf) Original data GEO bulk
157 CMP 24hr 0.69 >More info 0.58 >More info Acetone 24hr root Original data GEO bulk
158 GST 4 h (leaf) 0.63 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
159 WT Col-0 Bgh inoculated 0.61 >More info 0.66 >More info WT Col-0 Un-inoculated Original data GEO bulk
160 E.orontii Infection 3 day 0.62 >More info 0.64 >More info Uninfection 3 day Original data Elicitor treatments
161 IRP1-OE-Fe--shoot 0.63 >More info 0.63 >More info COL-0-Fe--shoot shoot Original data
162 Triazolopyrimidine EC50 0.74 >More info 0.52 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
163 pmr4-1 control 0.67 >More info 0.59 >More info WT control uninoculated Original data GEO bulk
164 Col whole leaf 1dpi -0.66 >More info -0.60 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
165 npr1-1 SA -0.69 >More info -0.56 >More info Col-0 SA complete seedling Original data
166 Laer pretreat GA Flg22 1h 0.54 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
167 CT101 ozone 0.76 >More info 0.49 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
168 pho1 0.75 >More info 0.50 >More info Col2WT Original data GEO bulk
169 WT Bc inoculation 14h 0.76 >More info 0.49 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
170 scrm-D 0.81 >More info 0.44 >More info Col-0 WT whole seedling Original data GEO bulk
171 OE WRKY63.3 0.67 >More info 0.58 >More info OE WRKY40.4 none leaf Original data GEO bulk
172 WT in -N 0.74 >More info 0.51 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
173 tt4 0.71 >More info 0.54 >More info Col-0 aerial part Original data
174 lht1 PstDC3000 48h 0.72 >More info 0.53 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
175 Col ozone 3h 0.60 >More info 0.65 >More info Col clean-air 3h ozone Original data GEO bulk
176 Octopus overexpressor 35SDYG25 0.64 >More info 0.61 >More info WS Original data GEO bulk
177 mkk1/mkk2 24h BTH rep 0.70 >More info 0.55 >More info Col-0 24h BTH rep Original data GEO bulk
178 Cor 10h 0.59 >More info 0.66 >More info Mock 10h Cor Original data GEO bulk
179 Chitosan 3h Treatment 0.68 >More info 0.56 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
180 pnp1-1 1wk +P 0.66 >More info 0.58 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
181 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.72 >More info 0.51 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
182 Pst-DC3000(avrRpm1)-4hpi 0.68 >More info 0.54 >More info Pst-DC3000-4hpi Original data GEO bulk
183 Myzus persicae saliva 0.55 >More info 0.67 >More info Control Original data GEO bulk
184 aphid saliva treated 0.55 >More info 0.67 >More info control aphid saliva treated leaves Original data GEO bulk
185 GO5; 0h switch to ambient CO2 concentrations; -0.81 >More info -0.41 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
186 Mutant ufo-1(flower) 0.72 >More info 0.50 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
187 miR393 flg22 2h 0.62 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
188 cat2-long-day 2d -0.74 >More info -0.48 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
189 WT 3h -P 0.62 >More info 0.60 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
190 flu over-tAPX 0.59 >More info 0.63 >More info WT Col Original data GEO bulk
191 INA 0.67 >More info 0.54 >More info CK INA seedling Original data
192 apum23 0.75 >More info 0.46 >More info WT (Col-3) aerial parts Original data GEO bulk
193 Col whole leaf 5 dpi 0.65 >More info 0.56 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
194 DFPM 0.63 >More info 0.58 >More info control Original data GEO bulk
195 coi1-16 ein2 sid2 ozone 0.78 >More info 0.43 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
196 Tsu -Fe 24h Shoots 0.74 >More info 0.47 >More info Tsu +Fe 24h Shoots Original data GEO bulk
197 pmr4-1 powdery mildew 0.61 >More info 0.60 >More info WT powdery mildew uninoculated Original data GEO bulk
198 Sulfometuron EC50 0.66 >More info 0.55 >More info Carrier Original data GEO bulk
199 Constans-mutant 0.65 >More info 0.55 >More info Col control above-ground whole plant Original data GEO bulk
200 leaf13 0.65 >More info 0.55 >More info unwounded leaves none Original data GEO bulk
201 SA 0.74 >More info 0.46 >More info WT mock Whole seedling Original data GEO bulk
202 ataf1-1 mutant Col-0 Un-inoculated -0.79 >More info -0.41 >More info WT Col-0 Un-inoculated Original data GEO bulk
203 pnp1-1 3h +P 0.63 >More info 0.57 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
204 Col-0 ozone 0.72 >More info 0.48 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
205 35:SUB1A 0.73 >More info 0.47 >More info WT whole seedling Original data GEO bulk
206 35S::ERF104 Flg22 4h 0.63 >More info 0.57 >More info 35S::ERF104 H2O 4h Original data GEO bulk
207 stn7-1 -0.68 >More info -0.51 >More info Col-0 rosette leaves Original data GEO bulk
208 S14-150 0.73 >More info 0.46 >More info wt Original data GEO bulk
209 CMP 4hr 0.65 >More info 0.54 >More info Acetone 4hr root Original data GEO bulk
210 bio4-1 mutant watered00µM biotin leaves -0.59 >More info -0.60 >More info bio4-1 mutant leaves leaves Original data GEO bulk
211 +1.6 mM Tween 20 1 h. 0.51 >More info 0.68 >More info +distilled water 1 h. Original data GEO bulk
212 P.syringae AvrRpt2 4 h (leaf) 0.72 >More info 0.47 >More info Mock 4 h (leaf) Original data Elicitor treatments
213 oas-a1.1 Cd 24h 0.64 >More info 0.54 >More info Cd 24h root Shoot Original data GEO bulk
214 bak1-3 +Pep2 10h 0.62 >More info 0.56 >More info WT +Pep2 10h Pep2 Original data GEO bulk
215 GA 0.66 >More info 0.52 >More info none GA Rosette Original data GEO bulk
216 FOX line K19624 0.68 >More info 0.50 >More info empty vector control (T3) FOX lines Original data GEO bulk
217 dense canopy 0.58 >More info 0.60 >More info single (control) petiole Original data GEO bulk
218 aerial organ callus inducing medium 12 h 0.58 >More info 0.59 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
219 upf1 0.68 >More info 0.49 >More info WT whole plant Original data GEO bulk
220 anac017-2 AntimycinA 3h -0.56 >More info -0.61 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
221 Flagellin 4 h (leaf) 0.60 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
222 Compost 0.68 >More info 0.49 >More info Perlite Compost Original data GEO bulk
223 leaf blade in D 0.53 >More info 0.64 >More info leaf blade in WL leaf blades Original data GEO bulk
224 Phaseolicola 2 h (leaf) 0.54 >More info 0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
225 WT 2-4h Xanthomonas 0.55 >More info 0.61 >More info WT T0 Original data GEO bulk
226 Atss3 Light1 -0.66 >More info -0.50 >More info Atss3 Dark0.5 Original data GEO bulk
227 UV 0.77 >More info 0.39 >More info WT aerial region Original data GEO bulk
228 aerial organ callus inducing medium 48 h 0.63 >More info 0.53 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
229 nia1nia2 0.68 >More info 0.48 >More info Col-0 whole seedlings Original data GEO bulk
230 Glyphosate EC50 0.69 >More info 0.47 >More info Carrier (Glyphosate) Original data GEO bulk
231 mpk6-ko Flg22 4h 0.57 >More info 0.59 >More info mpk6-ko H2O 4h Original data GEO bulk
232 Leafminer systemically damaged thaliana seedlings 0.59 >More info 0.57 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
233 toc1-1-53hr 0.75 >More info 0.41 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
234 treated group 0.42 >More info 0.74 >More info Control group Original data
235 WT +elf18 2h 0.57 >More info 0.58 >More info WT untreated elf18 Original data GEO bulk
236 M6PR transgenic 0mM NaCl 0.71 >More info 0.44 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
237 cat2-2; 8h switch to ambient CO2 concentrations; 0.74 >More info 0.41 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
238 overexpresser LBD38 in -N -0.73 >More info -0.42 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
239 vte2-1 3d vernalization 0.58 >More info 0.57 >More info WT 3d vernalization Original data GEO bulk
240 16h Col-0 0.71 >More info 0.44 >More info 00h Col-0 Original data GEO bulk
241 col-5 hrpA 12h 0.53 >More info 0.62 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
242 toc1-1-57hr 0.73 >More info 0.42 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
243 AvrRpm1 2 h (leaf) 0.56 >More info 0.58 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
244 spx1 spx2 complete 0.76 >More info 0.38 >More info WT complete seedlings Original data
245 R. solani AG2-1 0.63 >More info 0.51 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
246 abi4-102 (II) 0.60 >More info 0.54 >More info Col (II) rosette Original data GEO bulk
247 csn5 (csn5a-2 csn5b) light 0.67 >More info 0.47 >More info WT light Original data GEO bulk
248 penta Alternaria 3dpi 0.75 >More info 0.39 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
249 mkk2 24h BTH rep 0.52 >More info 0.61 >More info Col-0 24h BTH rep Original data GEO bulk
250 ex1ex2flu dark 8hours/30 minute light -0.82 >More info -0.31 >More info col dark 8hours/30 minute light Original data GEO bulk
251 anac017-1 H2O2 3h -0.66 >More info -0.47 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
252 eds16 whole leaf 7d UI -0.63 >More info -0.50 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
253 sid2-avrB-6h -0.52 >More info -0.61 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
254 aerial organ callus inducing medium 24h 0.61 >More info 0.52 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
255 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.83 >More info -0.30 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
256 sid2-2 safener -0.58 >More info -0.54 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
257 1h light (+Lincomycin) 0.59 >More info 0.53 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
258 Mature callus 0.61 >More info 0.51 >More info Young callus hypocotyls Original data GEO bulk
259 Drought Stress 24 h (shoot) 0.62 >More info 0.50 >More info Stress mock 24 h (shoot) Original data Stress treatments
260 P.p 30hai 0.60 >More info 0.52 >More info At-Control roots Original data GEO bulk
261 R. solani AG8 0.67 >More info 0.45 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
262 npr1 sni1 brca2a SA -0.73 >More info -0.39 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
263 Mutant sav3-2 (SH) 0.48 >More info 0.64 >More info Col-0 (SH) Original data GEO bulk
264 Got7 UV 0.49 >More info 0.63 >More info Got7 mock UV seedling Original data
265 sav3-2 shade 0.48 >More info 0.64 >More info Col-0 shade seedlings Original data GEO bulk
266 shoots bhlh100/101 0uM Fe 0.69 >More info 0.43 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
267 SOS1 0mM NaCl 0.71 >More info 0.41 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
268 atmospheric CO2 low Mg shoot 0.71 >More info 0.41 >More info atmospheric CO2 normal Mg shoot Shoot Original data
269 Stem tissue 5 days NAA 0.65 >More info 0.46 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
270 oxt6 mutant -0.65 >More info -0.46 >More info WT Original data GEO bulk
271 sdg2 0.71 >More info 0.40 >More info wt seedling Original data GEO bulk
272 rGRF 0.59 >More info 0.52 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
273 Fenclorim 4hr 0.59 >More info 0.52 >More info Acetone 4hr root Original data GEO bulk
274 GO5; harvested 8h continiously maintained in high
CO2;		 -0.63 >More info -0.48 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
275 irradiated leaf (cmt 1d) 0.66 >More info 0.44 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
276 Mutant cry1 (High Light) -0.68 >More info -0.42 >More info Col-0 (High Light) Original data GEO bulk
277 12h Col-0 0.67 >More info 0.43 >More info 00h Col-0 Original data GEO bulk
278 atgsnor1-1-avrB-6h 0.52 >More info 0.58 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
279 hrpA 7h 0.57 >More info 0.53 >More info Mock 7h hrpA Original data GEO bulk
280 cry1 high light -0.68 >More info -0.42 >More info Col-O high light Original data GEO bulk
281 Ws 100mM NaCl 0.54 >More info 0.55 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
282 WT 1wk -P 0.63 >More info 0.46 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
283 Ws leaf 100mM NaCl 0.54 >More info 0.55 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
284 Lipopolysaccaride4 h (leaf) 0.63 >More info 0.46 >More info Mock 4 h (leaf) Original data Elicitor treatments
285 Salt Stress 24 h (shoot) 0.62 >More info 0.47 >More info Stress mock 24 h (shoot) Original data Stress treatments
286 pnp1-1 1wk -P 0.70 >More info 0.39 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
287 AFB1 flg22 2h 0.60 >More info 0.49 >More info WT 0h Leaf tissue Original data GEO bulk
288 seedlings protease IV 0.52 >More info 0.57 >More info seedlings nontreated control whole seedling Original data
289 Mutant iaa17-6 0.49 >More info 0.60 >More info Col Original data GEO bulk
290 hst5 0.57 >More info 0.51 >More info Col-0 Original data GEO bulk
291 AFB1 0h 0.66 >More info 0.42 >More info Col 0h Leaf Original data GEO bulk
292 Col-0 under 4 days salt 0.60 >More info 0.48 >More info Col-0 under control 4 days salt treatment rosette Original data
293 FOX line K16331 0.60 >More info 0.48 >More info empty vector control (T3) FOX lines Original data GEO bulk
294 atmospheric CO2 high Mg shoot 0.66 >More info 0.42 >More info atmospheric CO2 normal Mg shoot Shoot Original data
295 MIL4 ox BTH 0.56 >More info 0.52 >More info Col BTH Original data GEO bulk
296 aerial organ callus inducing medium 96 h 0.56 >More info 0.52 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
297 dor drought 0.45 >More info 0.63 >More info WT drought Original data GEO bulk
298 Col-0 +lincomycin 0.48 >More info 0.60 >More info Col-0 -lincomycin Original data GEO bulk
299 P.p 10.5hai 0.51 >More info 0.56 >More info At-Control roots Original data GEO bulk
300 Col-0 mbs1-1 HL 3h -0.51 >More info -0.56 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
301 cdpk6-yfp 0.78 >More info 0.29 >More info Kan seedlings Original data GEO bulk
302 Mutant NahG(leaf) -0.63 >More info -0.44 >More info Col-0 (leaf) Original data GEO bulk
303 cov1 cov2 stem Base 0.69 >More info 0.38 >More info WT stem Base stem Base Original data GEO bulk
304 rcf1-1 cold 0h 0.50 >More info 0.57 >More info WT cold 0h Control seedlings Original data GEO bulk
305 plant (tga2-5-6) 4h control 0.63 >More info 0.43 >More info plant (Col-0) 4h control Original data GEO bulk
306 npr1-3 MOCK 48h -0.58 >More info -0.48 >More info Col-0 MOCK 48h Original data GEO bulk
307 toc1-1-77hr 0.71 >More info 0.35 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
308 C24 ozone 0.72 >More info 0.34 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
309 Bur-0-3h IAA 0.65 >More info 0.41 >More info Bur-0h IAA whole plant Original data GEO bulk
310 Rsch CA -0.68 >More info -0.38 >More info Col CA Leaves Original data
311 Mutant tga2_5_6 0.63 >More info 0.43 >More info Col-0 Original data GEO bulk
312 mil4 BTH 0.47 >More info 0.59 >More info Col BTH rosettes Original data GEO bulk
313 Mutant ag-12(flower) 0.68 >More info 0.37 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
314 miR393 flg22 1h 0.61 >More info 0.44 >More info WT 0h Leaf tissue Original data GEO bulk
315 12h-DC3000 avrRpm1 0.59 >More info 0.46 >More info 12h-DC3000 leaves Original data GEO bulk
316 aox1a:rpoTmp untreated 0.60 >More info 0.45 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
317 OE WRKY40.4 -0.63 >More info -0.42 >More info OE WRKY40.4 none leaf Original data GEO bulk
318 Mutant gh3.5-1D (AvrRpt2) 0.55 >More info 0.50 >More info Col-0 (AvrRpt2) Original data GEO bulk
319 CMV-A2b mutant 0.58 >More info 0.47 >More info Mock-At Aerial tissues Original data GEO bulk
320 20h Col-0 0.61 >More info 0.43 >More info 00h Col-0 Original data GEO bulk
321 Mutant cry1 -0.68 >More info -0.36 >More info Col-0 Original data GEO bulk
322 camta1/2/3 24h cold 0.53 >More info 0.51 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
323 long 17-degree- 0.57 >More info 0.47 >More info control long Original data GEO bulk
324 Stem wox4 -0.60 >More info -0.44 >More info Stem Col first internode of stem Original data GEO bulk
325 cry1 low light -0.68 >More info -0.36 >More info Col-O low light Original data GEO bulk
326 erf104-ko Flg22 4h 0.47 >More info 0.57 >More info erf104-ko H2O 4h Original data GEO bulk
327 Col-Luc WT 3h antimycin A 0.49 >More info 0.55 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
328 atmyc2 cop1 Seedling BL 0.48 >More info 0.56 >More info WT Seedling BL Original data GEO bulk
329 Mutant sav3-2 (WL) 0.42 >More info 0.61 >More info Col-0 (WL) Original data GEO bulk
330 sav3-2 light 0.42 >More info 0.61 >More info Col-0 light seedlings Original data GEO bulk
331 Atwrky63 -0.73 >More info -0.29 >More info Col0 none leaf Original data GEO bulk
332 leaf rlt1-1rlt2-1 -0.56 >More info -0.46 >More info leaf Col-0 leaf Original data GEO bulk
333 shoot-10 μM DEX- 6 hr 0.52 >More info 0.50 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
334 C24 UV1 -0.80 >More info -0.22 >More info C24 mock UV seedling Original data
335 expressing C2 MeJA -0.53 >More info -0.49 >More info LUC2T Original data GEO bulk
336 35S:RPS4 eds1-2 2h -0.41 >More info -0.61 >More info 35S:RPS4 2h leaves Original data
337 WT flg22 1h 0.62 >More info 0.39 >More info WT 0h Leaf tissue Original data GEO bulk
338 A. lyrata -0.60 >More info -0.41 >More info A. thaliana mature leaves before flowering Original data GEO bulk
339 atgsnor1-3-avrB-6h -0.59 >More info -0.42 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
340 petiole in D 0.40 >More info 0.61 >More info petiole in WL petioles Original data GEO bulk
341 des1.1 0.38 >More info 0.63 >More info Leaves-WT leaf Original data GEO bulk
342 sta1 0.70 >More info 0.30 >More info WT Original data GEO bulk
343 csn3-1 light 0.59 >More info 0.41 >More info WT light Original data GEO bulk
344 pad4-PsmES4326-24hpi -0.61 >More info -0.39 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
345 seedlings +5AC 0.67 >More info 0.33 >More info control seedlings 10-day old whole seedling Original data GEO bulk
346 miR 0h 0.59 >More info 0.41 >More info Col 0h Leaf Original data GEO bulk
347 shoot-10 μM DEX- 12 hr 0.52 >More info 0.48 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
348 35S::KLU 0.63 >More info 0.37 >More info WT Shoot Original data
349 prmt5-5 -0.64 >More info -0.36 >More info WT Col continuous light Aerial tissue Original data GEO bulk
350 hyl1 0.48 >More info 0.52 >More info Col-0 Original data GEO bulk
351 4C 2h(SOIL) 0.44 >More info 0.56 >More info 4C 0h(SOIL) Original data GEO bulk
352 brm-101 0.45 >More info 0.55 >More info Ler Original data GEO bulk
353 sfr3 cold 0.56 >More info 0.43 >More info WT cold All aerial tissue Original data GEO bulk
354 Laer Flg22+GA 2h 0.58 >More info 0.41 >More info Laer Control leaf discs Original data GEO bulk
355 pap1-D/tt4 0.57 >More info 0.42 >More info Col-0 aerial part Original data
356 Col-0 flu HL 3h 0.56 >More info 0.43 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
357 SPT4-R3 seedlings0 DAS 0.51 >More info 0.48 >More info Col-0 seedlings0 DAS seedlings Original data
358 WT +Pep2 2h 0.64 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
359 Methyl Jasmonate 1 h 0.49 >More info 0.50 >More info Mock 1 h Original data Basic hormone treatment of seedlings
360 col-5 DC3000 12h 0.43 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
361 Elevated CO2 LIMITING N DAY -0.43 >More info -0.56 >More info Elevated CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
362 rpl24 total 0.58 >More info 0.40 >More info WT total seedling shoot/aerial seedling Original data
363 MYB12OX/tt4 0.57 >More info 0.41 >More info Col-0 aerial part Original data
364 anti-sense for AtAOX1a 0.59 >More info 0.39 >More info WT Original data GEO bulk
365 scrm-D:mute 0.66 >More info 0.32 >More info Col-0 WT whole seedling Original data GEO bulk
366 Laer Flg22+GA 1h 0.59 >More info 0.39 >More info Laer Control leaf discs Original data GEO bulk
367 gun1gun5 far-red pretreated -0.51 >More info -0.47 >More info WT far-red pretreated Original data GEO bulk
368 Total RNA 35S:HF-RPL18 0.60 >More info 0.38 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
369 Elevated CO2 leaf primordia 0.62 >More info 0.36 >More info Ambient CO2 leaf primordia leaf primordia Original data
370 leaf chr11-1chr17-1 0.57 >More info 0.41 >More info leaf Col-0 leaves Original data GEO bulk
371 Col-0-avrB-6h 0.42 >More info 0.56 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
372 siliques AtHb1 control 0.46 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
373 8hr-pH4.5 0.52 >More info 0.45 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
374 ein5-1 ski2-3 0.54 >More info 0.43 >More info Col-0 aerial tissue Original data
375 Cd 24h root -0.53 >More info -0.44 >More info WT-Untreated Shoot Original data GEO bulk
376 AFB1 flg22 1h 0.60 >More info 0.37 >More info WT 0h Leaf tissue Original data GEO bulk
377 IRP1-OE-Ctrl--shoot 0.60 >More info 0.37 >More info COL-0-Ctrl--shoot shoot Original data
378 albino Ds13-2198-1 -0.58 >More info -0.38 >More info control Original data GEO bulk
379 Shoot P recovery 0.59 >More info 0.37 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
380 0.5h light (+Lincomycin) 0.51 >More info 0.45 >More info 0.5h light (-Lincomycin) seedlings Original data GEO bulk
381 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.52 >More info 0.44 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
382 Mutant ga1-5 -0.51 >More info -0.45 >More info Ler-1 Original data Comparison of plant hormone related mutant
383 rosette leaves lcr 0.36 >More info 0.60 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
384 E2Fa-Dpa 0.64 >More info 0.31 >More info WT Original data GEO bulk
385 sav1-1 light 0.51 >More info 0.44 >More info Col-0 light seedlings Original data GEO bulk
386 WT mitomycin C 0.63 >More info 0.32 >More info WT mock shoot apical meristem Original data
387 Col-0-3h IAA 0.63 >More info 0.32 >More info Col-0-0h IAA whole plant Original data GEO bulk
388 Col leaves 120h LT 0.57 >More info 0.38 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
389 Laer Flg22 2h 0.54 >More info 0.41 >More info Laer Control leaf discs Original data GEO bulk
390 DC3000 2 h (leaf) 0.37 >More info 0.58 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
391 oas-a1.1 shoot -0.42 >More info -0.53 >More info WT-Untreated Shoot Original data GEO bulk
392 21h-DC3000 avrRpm1 -0.66 >More info -0.28 >More info 21h-DC3000 leaves Original data GEO bulk
393 MYB12OX 0.66 >More info 0.28 >More info Col-0 aerial part Original data
394 WT AntimycinA 3h 0.40 >More info 0.54 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
395 eds16 laser microdissected 5 dpi -0.65 >More info -0.29 >More info Col laser microdissected 5 dpi LMD leaf epidermal and mesophyll cells Original data GEO bulk
396 npr1-PsmES4326-24hpi -0.51 >More info -0.43 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
397 rcf1-1 cold 12h 0.50 >More info 0.44 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
398 PBZ 0.42 >More info 0.52 >More info none PBZ Rosette Original data GEO bulk
399 irradiated leaf (WT 1d) 0.67 >More info 0.26 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
400 sid2-1 warm -0.65 >More info -0.28 >More info WT warm entire aerial part Original data GEO bulk
401 Cold Stress 24 h (shoot) 0.56 >More info 0.37 >More info Stress mock 24 h (shoot) Original data Stress treatments
402 CHLM overexpression -0.54 >More info -0.39 >More info Col-0 estr green tissue Original data GEO bulk
403 JMJ24 knockout 0.64 >More info 0.29 >More info WT Original data GEO bulk
404 anac017-2 H2O2 3h -0.51 >More info -0.42 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
405 WT NAA/flg 2h 0.55 >More info 0.37 >More info WT 0h Leaf tissue Original data GEO bulk
406 Mutant nph4-1_arf19-1 0.52 >More info 0.40 >More info Col Original data GEO bulk
407 sid2-2 24hpi A. brassicicola -0.55 >More info -0.37 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
408 til1-1 22C 0.53 >More info 0.39 >More info Col-0 22C Original data GEO bulk
409 ced1 -0.54 >More info -0.38 >More info WT PEG 6hr seedlings Original data GEO bulk
410 46T-Dry 0.38 >More info 0.54 >More info WT-Dry dehydration treatment 1h Original data
411 wrky72-1-NOCO2 INFECTED 0.60 >More info 0.32 >More info WT-NOCO2 INFECTED Original data GEO bulk
412 anac017-2 water 3h -0.62 >More info -0.30 >More info WT water 3h 3h_water Original data GEO bulk
413 sid2-2 mock -0.52 >More info -0.39 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
414 root Dosed gold 0.52 >More info 0.39 >More info root No gold .125 mM gold 24 h roots Original data
415 dor control 0.53 >More info 0.38 >More info WT control Original data GEO bulk
416 rpl24 polysome 0.53 >More info 0.38 >More info WT polysome seedling shoot/aerial seedling Original data
417 0.125 mM gold 24 h 0.52 >More info 0.39 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
418 arf2 brz -0.52 >More info -0.39 >More info arf2 mock Original data GEO bulk
419 35SAvr 0.38 >More info 0.53 >More info Ecotype Col Original data GEO bulk
420 OE-HRA1 2HS  0.62 >More info 0.29 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
421 nas4x leaves + Fe 0.69 >More info 0.22 >More info WT leaves + Fe Leaves Original data GEO bulk
422 Starch sheath 5 days MS incubation 0.34 >More info 0.57 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
423 long 14-degree- 0.64 >More info 0.26 >More info control long Original data GEO bulk
424 Dark 6h ivd 0.51 >More info 0.39 >More info 0h ivd Original data
425 ABA DFPM 0.54 >More info 0.36 >More info control Original data GEO bulk
426 rcf1-1 cold 24h 0.40 >More info 0.50 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
427 seedling 12h after HZE WT 0.37 >More info 0.53 >More info seedling day 1 unirradiated WT 12h Original data
428 Mutant axr3-1 0.55 >More info 0.34 >More info Col Original data GEO bulk
429 Prohexadione 12 h 0.53 >More info 0.36 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
430 46T-CK 0.35 >More info 0.54 >More info WT-CK none Original data
431 atsf1-2 mutant seedling 0.59 >More info 0.30 >More info Col-0 seedling seedlings Original data
432 WT leaves - Fe 0.55 >More info 0.33 >More info WT leaves + Fe Leaves Original data GEO bulk
433 HSP90 Reduced RNAi-B1 0.54 >More info 0.34 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
434 C24-3h IAA 0.55 >More info 0.33 >More info C24-0h IAA whole plant Original data GEO bulk
435 8h-DC3000 hrpA 0.54 >More info 0.34 >More info 8h-DC3000 leaves Original data GEO bulk
436 brat1 0.52 >More info 0.36 >More info WT Original data
437 npr1 sni1 ssn2 -0.57 >More info -0.31 >More info npr1 sni1 water water seedling Original data GEO bulk
438 ani1 T0.5 -0.33 >More info -0.54 >More info WT T0.5 root tissue Original data GEO bulk
439 Laer Flg22 1h 0.51 >More info 0.36 >More info Laer Control leaf discs Original data GEO bulk
440 overexpresser LBD37 in -N -0.65 >More info -0.22 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
441 3x(m) 0.52 >More info 0.35 >More info 2x two week old seedlings Original data
442 08h Col-0 0.55 >More info 0.31 >More info 00h Col-0 Original data GEO bulk
443 rosette Dark Wounded 0.31 >More info 0.55 >More info rosette Dark Control Original data GEO bulk
444 mbd4 mutant thaliana 10-day-old seedling 0.50 >More info 0.36 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
445 GR-REV 30min 0.58 >More info 0.28 >More info Col 30min Original data GEO bulk
446 AtMYB30-as 90-105 min Xanthomonas 0.28 >More info 0.58 >More info WT 90-105 min Xanthomonas Original data GEO bulk
447 dcl1-7 0.55 >More info 0.30 >More info Ler Original data GEO bulk
448 ptpks2 0.52 >More info 0.32 >More info Col-WT leaves Original data GEO bulk
449 toc1-1-93hr 0.51 >More info 0.33 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
450 auxin and brassinazole seedlings 0.52 >More info 0.31 >More info auxin seedlings Original data GEO bulk
451 Dex-rga(delta17) 2h GA4 -0.55 >More info -0.28 >More info Vector 4h GA4 shoots Original data GEO bulk
452 TNT-seedlings 0.30 >More info 0.53 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
453 Laer pretreat GA Flg22 0h 0.60 >More info 0.23 >More info Laer pretreat water control leaf discs Original data GEO bulk
454 toc1-1-81hr 0.58 >More info 0.25 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
455 WT 1mM phosphate 8 hours. -0.57 >More info -0.26 >More info WT control (not supplemented). Original data
456 4C 7d 0.52 >More info 0.30 >More info 4C 0h Original data GEO bulk
457 toc1-1-73hr 0.51 >More info 0.31 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
458 WOX1-1 0.51 >More info 0.31 >More info Col-0 aerial part Original data
459 SCR-GR Time 1H Dex 0.32 >More info 0.50 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
460 opr3 JA 0.5 h 0.19 >More info 0.63 >More info opr3 0 h Original data GEO bulk
461 Lip0 UV 0.57 >More info 0.25 >More info Lip0 mock UV seedling Original data
462 MIL4 ox 0.57 >More info 0.25 >More info Col Original data GEO bulk
463 IAA7mII over-expressor IAA Treated 0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
464 rpl24 nonpolysome 0.52 >More info 0.29 >More info WT nonpolysome seedling shoot/aerial seedling Original data
465 cat2-short-day 2d -0.60 >More info -0.21 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
466 wrky72-2-NOCO2 INFECTED 0.54 >More info 0.26 >More info WT-NOCO2 INFECTED Original data GEO bulk
467 sex1-3 0.51 >More info 0.29 >More info Col-WT leaves Original data GEO bulk
468 cdkf:1-2 0.50 >More info 0.30 >More info wt seedling young seedlings Original data GEO bulk
469 OE-HRA1 NS  0.51 >More info 0.29 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
470 4h decapitation -0.53 >More info -0.27 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
471 brat1nrpe1 0.58 >More info 0.22 >More info WT Original data
472 nhx5-2/nhx6 0.67 >More info 0.12 >More info WT Rosette leaf Original data GEO bulk
473 arr10 arr12 tZ 0.51 >More info 0.28 >More info WT tZ Original data GEO bulk
474 CHS-silenced type -0.60 >More info -0.19 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
475 hrpA fliC 7h 0.51 >More info 0.28 >More info Mock 7h hrpA fliC Original data GEO bulk
476 vte2 leaves 120h LT 0.75 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
477 elevated CO2 normal Mg shoot 0.57 >More info 0.22 >More info atmospheric CO2 normal Mg shoot Shoot Original data
478 SA Treated 0.71 >More info 0.08 >More info Water Original data GEO bulk
479 ABA SA 24h 0.22 >More info 0.57 >More info EtOH 24h 24hr Original data GEO bulk
480 L2.5 mutant -0.65 >More info -0.13 >More info Wt Original data GEO bulk
481 Col-0 DCA 6d 0.60 >More info 0.18 >More info Col-0 MOCK 6d Original data GEO bulk
482 ago4-1 0.54 >More info 0.24 >More info WT La-er whole plants Original data GEO bulk
483 gir flower 33d 0.53 >More info 0.25 >More info Col-7 flower 33d flower Original data GEO bulk
484 bZIP1ko mutant N+Light+ 0.61 >More info 0.16 >More info WT-sib N+Light+ whole plant Original data GEO bulk
485 psad1-1 stn7-1 -0.52 >More info -0.25 >More info Col-0 rosette leaves Original data GEO bulk
486 plant (tga2-5-6) 4h phytoprostane A1 0.57 >More info 0.20 >More info plant (tga2-5-6) 4h control Original data GEO bulk
487 ARR21C-ox 0.51 >More info 0.26 >More info Col-0 Original data ARR21C overexpression
488 Senescing leaf 0.55 >More info 0.22 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
489 MPK6 ox Shoot Hypoxia 0.50 >More info 0.27 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
490 nia1nia2noa1-2 0.50 >More info 0.26 >More info Col-0 whole seedlings Original data GEO bulk
491 35S::PI ap3-3 35S::AP-GR +DEX 0.51 >More info 0.24 >More info 0hr DEX Original data GEO bulk
492 elevated CO2 high Mg shoot 0.67 >More info 0.08 >More info atmospheric CO2 high Mg shoot Shoot Original data
493 eif3h 0.50 >More info 0.24 >More info WT Original data GEO bulk
494 cys-c1 leaf -0.58 >More info -0.16 >More info Leaf-WT leaves Original data GEO bulk
495 HARAP aerobic -0.21 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
496 ex1 flu dark 8hours/30 minute light -0.62 >More info -0.11 >More info col dark 8hours/30 minute light Original data GEO bulk
497 24h +Pi -0.52 >More info -0.21 >More info 24h -Pi root Original data GEO bulk
498 penta Pst DC3000 12hpi 0.62 >More info 0.11 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
499 opr3 JA 2 h 0.11 >More info 0.62 >More info opr3 0 h Original data GEO bulk
500 35S:PCO1 hypoxia -0.22 >More info -0.51 >More info WT hypoxia whole rosette Original data
501 FLIGHT TAGESB plate6 ROOTS 0.18 >More info 0.55 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
502 bZIP1ko mutant N-Light- -0.51 >More info -0.21 >More info WT-sib N-Light- whole plant Original data GEO bulk
503 calcicole ecotype Cal-0 0.66 >More info 0.06 >More info Col-4 1 mM CaCl2 Original data GEO bulk
504 0h hml 0.74 >More info -0.02 >More info 0h wt Original data
505 KO-nudx19 leaves 0.51 >More info 0.21 >More info WT leaves rosette leaves Original data
506 HairpinZ 4 h (leaf) 0.75 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
507 SOS1 100mM NaCl 0.57 >More info 0.14 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
508 JMJ24-IBM1 double knockout -0.53 >More info -0.18 >More info WT Original data GEO bulk
509 nhx5 0.58 >More info 0.13 >More info WT Rosette leaf Original data GEO bulk
510 WT 30μM arsenate 8 hours. 0.52 >More info 0.19 >More info WT control (not supplemented). Original data
511 gpa1-4/agb1-2 clean-air 2d 0.50 >More info 0.21 >More info Col clean-air 2d clean-air Original data GEO bulk
512 WT NAA 2h -0.08 >More info -0.63 >More info WT 0h Leaf tissue Original data GEO bulk
513 bri1-116 -0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
514 WT-drought 0.56 >More info 0.14 >More info WT-control leaf Original data
515 WT+chitooctaose 0.14 >More info 0.56 >More info WT+water chitooctaose seedlings Original data GEO bulk
516 seed germinating in countinuous light 24h SL 0.03 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
517 PRR5-VP 18h light on -0.52 >More info -0.18 >More info WT 18h light on whole plant Original data GEO bulk
518 Col-0 2HS 0.18 >More info 0.52 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
519 mil4 0.61 >More info 0.08 >More info Col rosettes Original data GEO bulk
520 NahG -0.50 >More info -0.19 >More info Col-0 Leaves Original data GEO bulk
521 gul2-1 mutant 0.51 >More info 0.18 >More info WT 7 day-old whole seedlings Original data
522 t-zeatin 0.5 h -0.08 >More info -0.61 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
523 Col PSTDC3000 24h 0.81 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
524 cat2-short-day 4d -0.63 >More info -0.05 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
525 Methyl Jasmonate 3 h 0.16 >More info 0.52 >More info Mock 3 h Original data Basic hormone treatment of seedlings
526 6h volatiles Sp. HRO-C48 0.18 >More info 0.50 >More info 6h untreated whole seedling Original data GEO bulk
527 PstDC3000 48h 0.56 >More info 0.11 >More info WT untreated 48hr leaf Original data GEO bulk
528 aphid infested 0.64 >More info 0.03 >More info control aphid infested Leaves Original data GEO bulk
529 aphid infested 0.64 >More info 0.03 >More info CTR Original data GEO bulk
530 Shoot -P -0.58 >More info -0.09 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
531 ape2 high light 0.53 >More info 0.13 >More info Ws-2 high light Original data GEO bulk
532 DUO1 induced 6h -0.54 >More info -0.12 >More info 6hr-not-induced whole plant Original data GEO bulk
533 hy5 low light -0.50 >More info -0.15 >More info Col-O low light Original data GEO bulk
534 Mutant hy5 -0.50 >More info -0.15 >More info Col-0 Original data GEO bulk
535 cpr5 sim smr1 0.55 >More info 0.10 >More info WT seedling Original data GEO bulk
536 G3P 0.57 >More info 0.08 >More info Mock distal leaves Original data GEO bulk
537 pollinated pop2-1 flowers -0.54 >More info -0.10 >More info pollinated WT flowers flowers Original data GEO bulk
538 pmr5 0.64 >More info 0.00 >More info Col-0 rosette Original data GEO bulk
539 tbf1-SA -0.54 >More info -0.09 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
540 Total RNA 35S:HF-RPL18 cold 0.60 >More info 0.03 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
541 Protoplast Induced 0.11 >More info 0.52 >More info Uninduced Original data GEO bulk
542 sfr6 cold 0.09 >More info 0.54 >More info WT cold All aerial tissue Original data GEO bulk
543 ddm1 F6 inflorescence 0.54 >More info 0.07 >More info wt Col inflorescence unopened flower buds Original data
544 SA 3h 0.11 >More info 0.50 >More info EtOH 3h 3hr Original data GEO bulk
545 psae1-3 stn7-1 0.50 >More info 0.10 >More info WS rosette leaves Original data GEO bulk
546 Total RNA 35S:AtCSP1-FH1 cold 0.50 >More info 0.10 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
547 coi1 -0.03 >More info -0.56 >More info Col-0 Leaves Original data GEO bulk
548 Mock pft1 leaf 0.00 >More info 0.59 >More info Mock Col-0 leaf water leaf Original data GEO bulk
549 CCA1-ox 6am non-polysomal 0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
550 Brz220 12 h 0.53 >More info 0.05 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
551 Shoot apex inflorescence (after bolting) -0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
552 atmyc2 Seedling BL 0.06 >More info -0.64 >More info WT Seedling BL Original data GEO bulk
553 tga2 tga5 tga6 ctrl -0.66 >More info 0.09 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
554 Ba1 UV 0.04 >More info 0.53 >More info Ba1 mock UV seedling Original data
555 P. infestans 6 h (leaf) 0.72 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
556 35S:RPS4 rrs1-11 2h 0.53 >More info 0.01 >More info 35S:RPS4 2h leaves Original data
557 seedling 3h after HZE WT 0.52 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
558 miR393 0h -0.01 >More info -0.52 >More info WT 0h Leaf tissue Original data GEO bulk
559 AtMYB30-ox 2-4h Xanthomonas 0.52 >More info -0.00 >More info WT 2-4h Xanthomonas Original data GEO bulk
560 ABA JA 24h -0.09 >More info 0.60 >More info EtOH 24h 24hr Original data GEO bulk
561 rao1-2 0.52 >More info -0.02 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
562 myb61 xylem -0.03 >More info 0.51 >More info wt xylem xylem Original data GEO bulk
563 WT roots - Fe 0.52 >More info -0.05 >More info WT roots + Fe Roots Original data GEO bulk
564 cat2-long-day 4d -0.52 >More info 0.05 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
565 vtc1-1 0.63 >More info -0.17 >More info Col-0 whole plant Original data GEO bulk
566 Mh0 UV -0.74 >More info 0.30 >More info Mh0 mock UV seedling Original data
567 epiF3 -0.51 >More info 0.07 >More info WT Col-0 aerial part Original data
568 glk1 glk2 GLK1-GR +DEX 24h -0.61 >More info 0.18 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
569 rdr6-15 0.59 >More info -0.37 >More info Col-0 plant inflorescence Original data
570 Light 3day hml -0.67 >More info 0.47 >More info 0h hml Original data
571 Polysomal RNA 35S:HF-RPL18 cold 0.53 >More info -0.41 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk