4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on GO5; 8h switch to ambient CO2 concentrations;
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List of experiments correlated with "GO5; 8h switch to ambient CO2 concentrations;"  Help Download transcriptome of top 30
Score Experiment Correlation from
GO5; 8h switch to ambient CO2 concentrations;		 Correlation to
GO5; 8h switch to ambient CO2 concentrations;		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 GO5; 8h switch to ambient CO2 concentrations; 1.00 >More info 1.00 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
2 Primisulfuron EC50 0.81 >More info 0.78 >More info Carrier (primisulfuron) Original data GEO bulk
3 Triazolopyrimidine EC50 0.81 >More info 0.77 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
4 Sulfometuron EC50 0.82 >More info 0.74 >More info Carrier Original data GEO bulk
5 Imidazolinone EC50 0.80 >More info 0.75 >More info Carrier (Imidazolinone) Original data GEO bulk
6 Shoot -Cs 0.70 >More info 0.84 >More info Control-shoot Original data GEO bulk
7 ein2-1 9 hpi A. brassicicola 0.78 >More info 0.75 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
8 35S::PI ap3-3 35S::AP-GR +DEX 0.75 >More info 0.76 >More info 0hr DEX Original data GEO bulk
9 WT AntimycinA 3h 0.76 >More info 0.74 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
10 Col ozone 3h 0.67 >More info 0.82 >More info Col clean-air 3h ozone Original data GEO bulk
11 oligomycin 4 h 0.77 >More info 0.71 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
12 Seedling KUA1-IOX est 0.72 >More info 0.76 >More info Seedling KUA1-IOX mock Original data
13 Col-0 9 hpi A. brassicicola 0.79 >More info 0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
14 TNT-seedlings 0.80 >More info 0.67 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
15 anac017-2 AntimycinA 3h -0.74 >More info -0.73 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
16 sid2-2 9 hpi A. brassicicola 0.77 >More info 0.70 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
17 Col-Luc WT 3h antimycin A 0.78 >More info 0.69 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
18 CMP 4hr 0.78 >More info 0.68 >More info Acetone 4hr root Original data GEO bulk
19 ataf1-1 mutant Col-0 Bgh inoculated 0.71 >More info 0.74 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
20 dde2-2 9 hpi A. brassicicola 0.76 >More info 0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
21 Fenclorim 4hr 0.77 >More info 0.67 >More info Acetone 4hr root Original data GEO bulk
22 atgsnor1-3-avrB-6h 0.73 >More info 0.71 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
23 cat2-2; 8h switch to ambient CO2 concentrations; 0.77 >More info 0.66 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
24 UV 0.74 >More info 0.67 >More info WT aerial region Original data GEO bulk
25 WT Col-0 Bgh inoculated 0.67 >More info 0.74 >More info WT Col-0 Un-inoculated Original data GEO bulk
26 AgNO3 3 h 0.71 >More info 0.68 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
27 35S:RPS4 eds1-2 8h -0.72 >More info -0.67 >More info 35S:RPS4 8h leaves Original data
28 B.cinerea 18 h infection 0.66 >More info 0.73 >More info Mock 18 h Original data Botrytis cinerea infection
29 Botrytis cinerea 18h 0.66 >More info 0.73 >More info control 18h Original data GEO bulk
30 rcf1-1 cold 24h 0.70 >More info 0.69 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
31 seedlings-week-old RECA1-overexpressing
transgenic		 0.74 >More info 0.63 >More info seedlings-week-old Col-0 seedlings Original data
32 GST 4 h (leaf) 0.64 >More info 0.73 >More info Mock 4 h (leaf) Original data Elicitor treatments
33 flu over-tAPX 0.76 >More info 0.61 >More info WT Col Original data GEO bulk
34 flu 0.77 >More info 0.59 >More info WT Col Original data GEO bulk
35 Leaf GLU1-KO 0.76 >More info 0.60 >More info Leaf Col(0) rosette leaves Original data GEO bulk
36 DFPM 0.71 >More info 0.64 >More info control Original data GEO bulk
37 oligomycin 1 h 0.68 >More info 0.67 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
38 GST NPP1 4 h (leaf) 0.66 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
39 pepr1-1 Pepr2-3 +Pep2 2h -0.67 >More info -0.66 >More info WT +Pep2 2h Pep2 Original data GEO bulk
40 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.72 >More info 0.60 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
41 Te ozone 0.71 >More info 0.61 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
42 WT flg22 2h 0.63 >More info 0.69 >More info WT 0h Leaf tissue Original data GEO bulk
43 rpoTmp(line) MLD stressed 0.74 >More info 0.57 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
44 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.74 >More info 0.57 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
45 col-5 hrpA 12h 0.67 >More info 0.64 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
46 aox1a:rpoTmp untreated 0.74 >More info 0.56 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
47 Cor 10h 0.68 >More info 0.62 >More info Mock 10h Cor Original data GEO bulk
48 sicy-192 gun1-101 cotyledons 0.67 >More info 0.63 >More info WT cotyledons cotyledons Original data
49 Col0-PsmES4326-24hpi 0.69 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
50 CT101 ozone 0.74 >More info 0.55 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
51 shoots bhlh100/101 0uM Fe 0.77 >More info 0.52 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
52 bak1-3 +Pep2 10h 0.71 >More info 0.58 >More info WT +Pep2 10h Pep2 Original data GEO bulk
53 Col-0 ozone 0.72 >More info 0.57 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
54 Botrytis cinerea 48h 0.76 >More info 0.52 >More info control 48h Original data GEO bulk
55 5-Triiodobenzoic acid3 h 0.73 >More info 0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
56 hrcC 0.70 >More info 0.58 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
57 Cycloheximide 3 h 0.69 >More info 0.59 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
58 C24 ozone 0.71 >More info 0.56 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
59 WT 3h -P 0.58 >More info 0.69 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
60 P.syringae AvrRpt2 4 h (leaf) 0.62 >More info 0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
61 coi1-16 ein2 sid2 ctrl -0.68 >More info -0.59 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
62 Phaseolicola 2 h (leaf) 0.60 >More info 0.66 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
63 anac017-1 H2O2 3h -0.74 >More info -0.52 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
64 Col whole leaf 5dpi 0.59 >More info 0.67 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
65 WT Bc inoculation 14h 0.69 >More info 0.57 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
66 E.coli TUV86 2 fliC 7h 0.65 >More info 0.60 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
67 Mutant siz1-3 (Drought) 0.68 >More info 0.57 >More info Col-0 (Drought) Original data GEO bulk
68 siz1-3 drought 0.68 >More info 0.57 >More info Col-0 drought Original data GEO bulk
69 hrpA 7h 0.64 >More info 0.61 >More info Mock 7h hrpA Original data GEO bulk
70 cat2-short-day 2d 0.67 >More info 0.57 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
71 nia1nia2 0.75 >More info 0.49 >More info Col-0 whole seedlings Original data GEO bulk
72 msh1 albino 0.74 >More info 0.49 >More info WT aerial part Original data GEO bulk
73 rao2 H2O2 3h -0.68 >More info -0.55 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
74 efr-1 +elf18 10h -0.65 >More info -0.58 >More info WT +elf18 10h elf18 Original data GEO bulk
75 R. solani AG8 0.73 >More info 0.50 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
76 col-5 DC3000 12h 0.67 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
77 6h +Pi -0.72 >More info -0.51 >More info 6h -Pi root Original data GEO bulk
78 Elevated CO2 AMPLE N NIGHT 0.56 >More info 0.66 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
79 Laer treat paclobutrazol (PAC) 0.66 >More info 0.56 >More info Laer Control leaf discs Original data GEO bulk
80 wrky33 Bc inoculation 14h 0.72 >More info 0.50 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
81 seedlings protease IV 0.57 >More info 0.65 >More info seedlings nontreated control whole seedling Original data
82 Flagellin 4 h (leaf) 0.64 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
83 CMP 24hr 0.71 >More info 0.51 >More info Acetone 24hr root Original data GEO bulk
84 aba3-1 0.45 >More info 0.77 >More info wt Original data GEO bulk
85 Col-0 under 4 days salt 0.76 >More info 0.45 >More info Col-0 under control 4 days salt treatment rosette Original data
86 Laer Flg22+GA 2h 0.64 >More info 0.57 >More info Laer Control leaf discs Original data GEO bulk
87 WT H2O2 3h 0.72 >More info 0.49 >More info WT water 3h 3h_H2O2 Original data GEO bulk
88 abh1 -ABA 0.53 >More info 0.68 >More info Col-0 -ABA Original data GEO bulk
89 root Dosed gold 0.68 >More info 0.53 >More info root No gold .125 mM gold 24 h roots Original data
90 coi1-16 ein2 sid2 ozone 0.69 >More info 0.52 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
91 S15-118 0.62 >More info 0.59 >More info wt Original data GEO bulk
92 0.125 mM gold 24 h 0.68 >More info 0.53 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
93 HopZ1a treated 0.69 >More info 0.52 >More info col Original data GEO bulk
94 CMV-WT 0.66 >More info 0.54 >More info Mock-At Aerial tissues Original data GEO bulk
95 pho1 0.66 >More info 0.54 >More info Col2WT Original data GEO bulk
96 mkk1/mkk2 24h BTH rep 0.72 >More info 0.48 >More info Col-0 24h BTH rep Original data GEO bulk
97 Laer Flg22 1h 0.67 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
98 WT+chitooctaose 0.53 >More info 0.65 >More info WT+water chitooctaose seedlings Original data GEO bulk
99 P.p 2.5hai 0.58 >More info 0.60 >More info At-Control roots Original data GEO bulk
100 WT NAA/flg 1h 0.60 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
101 WT in -N 0.73 >More info 0.45 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
102 nia1nia2noa1-2 0.71 >More info 0.47 >More info Col-0 whole seedlings Original data GEO bulk
103 8hr-pH4.5 0.64 >More info 0.53 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
104 WT flg22 1h 0.55 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
105 Laer Flg22 2h 0.66 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
106 Nicotinamide-65hr 0.67 >More info 0.50 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
107 anac017-1 AntimycinA 3h -0.53 >More info -0.64 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
108 coi1-2 0.62 >More info 0.54 >More info Col-0 mock Whole seedling Original data GEO bulk
109 chito-octamer 0.52 >More info 0.64 >More info Col Mock Original data GEO bulk
110 Leafminer damaged seedlings 0.60 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
111 Whole root - low pH 12H 0.62 >More info 0.54 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
112 Whole root - low pH 6H 0.59 >More info 0.57 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
113 pmr5 pmr6 0.59 >More info 0.57 >More info Col-0 Original data GEO bulk
114 S58-2 0.58 >More info 0.58 >More info wt Original data GEO bulk
115 35S:RPS4 eds1-2 24h -0.59 >More info -0.57 >More info 35S:RPS4 24h leaves Original data
116 Light 3day wt -0.69 >More info -0.47 >More info 0h wt Original data
117 Cocultivation 8 hrs root 0.72 >More info 0.44 >More info Mock cocultivation 8 hrs root Root Original data
118 msh1 recA3 untreated 0.46 >More info 0.70 >More info WT untreated above-ground parts Original data GEO bulk
119 camta1/2/3 24h cold 0.61 >More info 0.54 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
120 Laer Flg22+GA 1h 0.65 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
121 WT-SA 0.57 >More info 0.58 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
122 AvrRpm1 2 h (leaf) 0.59 >More info 0.55 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
123 upf1 0.55 >More info 0.59 >More info WT whole plant Original data GEO bulk
124 pad4-PsmES4326-24hpi -0.55 >More info -0.59 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
125 WT+H2O2 0.58 >More info 0.56 >More info WT H2O2 Original data GEO bulk
126 pepr1-1 Pepr2-3 +Pep2 10h -0.62 >More info -0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
127 Dex-rga(delta17) 2h GA4+DEX -0.65 >More info -0.49 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
128 col-5 DC3000-avrRpm 4h 0.61 >More info 0.53 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
129 Col whole leaf 7dpi 0.57 >More info 0.57 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
130 IMI 4mM 0.73 >More info 0.41 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
131 bZIP1ko mutant N+Light- 0.43 >More info 0.71 >More info WT-sib N+Light- whole plant Original data GEO bulk
132 Col-0-avrB-6h 0.67 >More info 0.46 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
133 apum23 0.59 >More info 0.54 >More info WT (Col-3) aerial parts Original data GEO bulk
134 Mutant gh3.5-1D (AvrRpt2) 0.54 >More info 0.59 >More info Col-0 (AvrRpt2) Original data GEO bulk
135 Glyphosate EC50 0.63 >More info 0.50 >More info Carrier (Glyphosate) Original data GEO bulk
136 +1.6 mM Tween 20 1 h. 0.61 >More info 0.52 >More info +distilled water 1 h. Original data GEO bulk
137 toc1-1-65hr 0.53 >More info 0.59 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
138 S14-150 0.51 >More info 0.61 >More info wt Original data GEO bulk
139 Dex-rga(delta17) 4h GA4+DEX -0.64 >More info -0.48 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
140 P.p 10.5hai 0.57 >More info 0.55 >More info At-Control roots Original data GEO bulk
141 root endodermis and quiescent center pH4.6 0.54 >More info 0.58 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
142 Col whole leaf 5 dpi 0.54 >More info 0.58 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
143 camta1/2/3 warm 0.59 >More info 0.53 >More info WT warm entire aerial part Original data GEO bulk
144 P.p 30hai 0.56 >More info 0.56 >More info At-Control roots Original data GEO bulk
145 Col whole leaf amplified 5 dpi 0.59 >More info 0.53 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
146 chito-tetramer 0.49 >More info 0.63 >More info Col Mock Original data GEO bulk
147 Col BTH 0.45 >More info 0.67 >More info Col rosettes Original data GEO bulk
148 Col-0 flu HL 3h 0.69 >More info 0.43 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
149 penta Alternaria 3dpi 0.70 >More info 0.42 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
150 safener treated 0.55 >More info 0.56 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
151 miR393 flg22 1h 0.46 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
152 Phytoprostane A1 4 h 0.62 >More info 0.49 >More info Col-0 Original data GEO bulk
153 Col-0 INA 48h 0.61 >More info 0.50 >More info Col-0 MOCK 48h Original data GEO bulk
154 aox1a(line) untreated -0.58 >More info -0.53 >More info WT(Col0) untreated (control aox1a) leaf Original data
155 Cor hrpS 10h 0.60 >More info 0.51 >More info Mock 10h Cor hrpS Original data GEO bulk
156 nas4x leaves - Fe -0.57 >More info -0.54 >More info WT leaves - Fe Leaves Original data GEO bulk
157 CLO 4mM 0.66 >More info 0.44 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
158 P.p 6hai 0.59 >More info 0.51 >More info At-Control roots Original data GEO bulk
159 Fenclorim 24hr 0.64 >More info 0.46 >More info Acetone 24hr root Original data GEO bulk
160 Nicotinamide-61hr 0.63 >More info 0.47 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
161 low CO2 + light 0.74 >More info 0.36 >More info normal CO2 + light Original data GEO bulk
162 Col-0 mbs1-1 HL 3h -0.53 >More info -0.57 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
163 A. thaliana-A. lyrata hybrid -0.52 >More info -0.58 >More info A. thaliana mature leaves before flowering Original data GEO bulk
164 SLWF infested 0.61 >More info 0.49 >More info SLWF uninfested rosette tissue Original data GEO bulk
165 Nicotinamide-57hr 0.65 >More info 0.45 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
166 camta1/3 warm 0.54 >More info 0.55 >More info WT warm entire aerial part Original data GEO bulk
167 PNO8 3 h 0.58 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
168 cpr5npr1svi1 0.62 >More info 0.47 >More info WT(COL) Original data GEO bulk
169 Col-0 C2H4 24h 0.62 >More info 0.47 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
170 Col whole leaf 3dpi 0.37 >More info 0.72 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
171 OE WRKY63.3 high light 0.49 >More info 0.60 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
172 Nicotinamide-93hr 0.64 >More info 0.44 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
173 mil4 BTH 0.61 >More info 0.47 >More info Col BTH rosettes Original data GEO bulk
174 root columella root cap pH4.6 0.60 >More info 0.48 >More info root columella root cap pH5.7 Original data GEO bulk
175 gai Control 0.67 >More info 0.41 >More info Laer Control leaf discs Original data GEO bulk
176 cpr5 0.56 >More info 0.52 >More info WT seedling Original data GEO bulk
177 cell culture 4 h phytoprostane A1 0.56 >More info 0.52 >More info cell culture 4 h control Original data GEO bulk
178 OH1 0.52 >More info 0.56 >More info Col-0 leaves Original data GEO bulk
179 camta2/3 warm 0.51 >More info 0.56 >More info WT warm entire aerial part Original data GEO bulk
180 WT 2-4h Xanthomonas 0.53 >More info 0.54 >More info WT T0 Original data GEO bulk
181 Nicotinamide-53hr 0.68 >More info 0.39 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
182 pnp1-1 3h +P 0.67 >More info 0.40 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
183 Mutant siz1-3 0.56 >More info 0.51 >More info Col-0 Original data GEO bulk
184 UV Stress 24 h (shoot) 0.63 >More info 0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
185 siz1-3 control 0.56 >More info 0.51 >More info Col-0 control Original data GEO bulk
186 Tsu -Fe 24h Roots 0.55 >More info 0.52 >More info Tsu +Fe 24h Roots Original data GEO bulk
187 mkk1/mkk2 control rep 0.63 >More info 0.44 >More info Col-0 Time 0 rep Original data GEO bulk
188 Tsu-1 -Fe 24h 0.55 >More info 0.52 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
189 vtc1 (II) 0.57 >More info 0.50 >More info Col (II) rosette Original data GEO bulk
190 35S::ERF104 Flg22 4h 0.47 >More info 0.60 >More info 35S::ERF104 H2O 4h Original data GEO bulk
191 del1-1 mutant 5d uninfected 0.59 >More info 0.47 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
192 rao2 AntimycinA 3h -0.56 >More info -0.50 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
193 irradiated leaf (cmt 1d) 0.57 >More info 0.49 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
194 Col-0 low oxygen 0.64 >More info 0.42 >More info Col-0 control low oxygen root Original data GEO bulk
195 upf3 0.53 >More info 0.53 >More info WT whole plant Original data GEO bulk
196 amiR-tor induced 3d 0.52 >More info 0.54 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
197 atmospheric CO2 low Mg shoot 0.66 >More info 0.40 >More info atmospheric CO2 normal Mg shoot Shoot Original data
198 Lipopolysaccaride4 h (leaf) 0.58 >More info 0.48 >More info Mock 4 h (leaf) Original data Elicitor treatments
199 AFB1 flg22 1h 0.45 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
200 agb1 gpa1 -ABA GC -0.47 >More info -0.59 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
201 AvrRpt2 Col-0 6hpi 0.62 >More info 0.43 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
202 IAA/inhibitor A Treated 0.62 >More info 0.43 >More info IAA Treated Original data GEO bulk
203 Nicotinamide-81hr 0.63 >More info 0.42 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
204 DC3000 2 h (leaf) 0.53 >More info 0.52 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
205 Nicotinamide-89hr 0.62 >More info 0.43 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
206 HopZ1a treated ulp1c ulp1d 0.63 >More info 0.42 >More info col Original data GEO bulk
207 IAA/inhibitor B Treated 0.54 >More info 0.51 >More info IAA Treated Original data GEO bulk
208 WT leaves - Fe 0.60 >More info 0.45 >More info WT leaves + Fe Leaves Original data GEO bulk
209 9m.KCl 0.54 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
210 root cortex pH4.6 0.52 >More info 0.53 >More info root cortex pH5.7 Original data GEO bulk
211 petiole in D 0.61 >More info 0.44 >More info petiole in WL petioles Original data GEO bulk
212 ABA DFPM 0.66 >More info 0.39 >More info control Original data GEO bulk
213 AFB1 flg22 2h 0.46 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
214 sni1 0.58 >More info 0.47 >More info WT Original data GEO bulk
215 Salt Stress 24 h (root) 0.69 >More info 0.36 >More info Stress mock 24 h (root) Original data Stress treatments
216 ice1 control 0.63 >More info 0.41 >More info WT control Original data GEO bulk
217 irradiated leaf (WT 1d) 0.50 >More info 0.54 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
218 aox1a(line) MLD stressed 0.56 >More info 0.48 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
219 Cor 24h 0.60 >More info 0.43 >More info Mock 24h Cor Original data GEO bulk
220 sid2-1 cold -0.52 >More info -0.51 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
221 pvip1 pvip2 0.59 >More info 0.44 >More info Col-0 whole rosettes Original data GEO bulk
222 edr1 18 h powdery mildew 0.61 >More info 0.42 >More info Col-0 18 h powdery mildew Original data GEO bulk
223 pmr5 0.45 >More info 0.58 >More info Col-0 Original data GEO bulk
224 Osmotic Stress 24 h (shoot) 0.65 >More info 0.37 >More info Stress mock 24 h (shoot) Original data Stress treatments
225 smg5-2 0.56 >More info 0.46 >More info WT whole plant Original data GEO bulk
226 (Ws-2)+100 uM As 0.68 >More info 0.34 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
227 Col ozone 2d 0.53 >More info 0.49 >More info Col clean-air 2d ozone Original data GEO bulk
228 Nicotinamide-69hr 0.65 >More info 0.37 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
229 leaf blade in D 0.54 >More info 0.48 >More info leaf blade in WL leaf blades Original data GEO bulk
230 Nicotinamide-73hr 0.61 >More info 0.41 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
231 msh1 recA3 heat shock 0.49 >More info 0.53 >More info WT heat shock above-ground parts Original data GEO bulk
232 npr1-1 SA -0.64 >More info -0.37 >More info Col-0 SA complete seedling Original data
233 WT seedlings MV 0.67 >More info 0.34 >More info WT seedlings control Seedlings Original data GEO bulk
234 seedling 24h after HZE atm-1 0.55 >More info 0.46 >More info seedling day 2 unirradiated atm-1 24h Original data
235 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold 0.56 >More info 0.45 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
236 WT powdery mildew 0.56 >More info 0.45 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
237 6-trichlorophenoxyacetic acid 3 h 0.41 >More info 0.60 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
238 RGA-GR-DEX 0.45 >More info 0.56 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
239 WT-NOCO2 INFECTED 0.48 >More info 0.53 >More info WT-MOCK Original data GEO bulk
240 WT chitooctaose 0.43 >More info 0.58 >More info WT water Original data GEO bulk
241 R. solani AG2-1 0.58 >More info 0.42 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
242 inhibitor A Treated 0.60 >More info 0.40 >More info Negative Control Original data GEO bulk
243 RPL18 TuMV inoculated total RNA 0.54 >More info 0.46 >More info mock inoculated total RNA PO Original data GEO bulk
244 HARAP aerobic -0.43 >More info -0.57 >More info WT aerobic aerobic Original data GEO bulk
245 Dex-rga(delta17) 4h GA4 -0.36 >More info -0.64 >More info Vector 4h GA4 shoots Original data GEO bulk
246 Whole root - low pH 24H 0.53 >More info 0.46 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
247 WT 1wk -P 0.72 >More info 0.27 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
248 gh3.5-1D 48 hpi 0.54 >More info 0.45 >More info Col-0 uninoculated Original data GEO bulk
249 ulp1c ulp1d +Pto 0.61 >More info 0.38 >More info ulp1c ulp1d mock Original data GEO bulk
250 BLM+INA 0.58 >More info 0.41 >More info CK BLM and INA seedling Original data
251 coi1-2 JA 0.53 >More info 0.46 >More info JA Whole seedling Original data GEO bulk
252 til1-1 22C 0.50 >More info 0.49 >More info Col-0 22C Original data GEO bulk
253 rcf1-1 cold 12h 0.58 >More info 0.41 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
254 Shoot -K 0.63 >More info 0.36 >More info Control-shoot Original data GEO bulk
255 K starvation (shoot) 0.63 >More info 0.36 >More info Ws (shoot) Original data GEO bulk
256 toc1-1-49hr 0.45 >More info 0.54 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
257 Col-0 V. longisporum-inoculated 48 hpi 0.47 >More info 0.52 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
258 cpr5scv1 0.60 >More info 0.38 >More info WT(COL) Original data GEO bulk
259 Nicotinamide-49hr 0.63 >More info 0.35 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
260 Differentiation 12h 0.56 >More info 0.42 >More info Differentiation 0h leaves Original data
261 CAX1/CAX3 mutant 0.53 >More info 0.45 >More info Col whole plant Original data GEO bulk
262 hrpA fliC 7h 0.60 >More info 0.38 >More info Mock 7h hrpA fliC Original data GEO bulk
263 seedling 1.5h after Gamma atm-1 0.56 >More info 0.42 >More info seedling day 1 unirradiated atm-1 1.5h Original data
264 WT 30μM arsenate 8 hours. 0.67 >More info 0.31 >More info WT control (not supplemented). Original data
265 erf104-ko Flg22 4h 0.47 >More info 0.51 >More info erf104-ko H2O 4h Original data GEO bulk
266 Elevated CO2 fully expanded leaf 0.64 >More info 0.33 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
267 sta1 0.57 >More info 0.40 >More info WT Original data GEO bulk
268 ataf1-1 mutant Col-0 Un-inoculated -0.61 >More info -0.36 >More info WT Col-0 Un-inoculated Original data GEO bulk
269 cdpk6-yfp 0.50 >More info 0.47 >More info Kan seedlings Original data GEO bulk
270 SA 4mM 0.66 >More info 0.31 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
271 Col leaves 48h LT 0.44 >More info 0.53 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
272 pnp1-1 1wk +P 0.68 >More info 0.28 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
273 mkk2 24h BTH rep 0.53 >More info 0.43 >More info Col-0 24h BTH rep Original data GEO bulk
274 seedlings by volatiles from leafminer damaged
Lima bean 24h		 -0.57 >More info -0.39 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
275 eds16 whole leaf 5dpi -0.52 >More info -0.44 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
276 Mature callus 0.50 >More info 0.46 >More info Young callus hypocotyls Original data GEO bulk
277 sng1 UV 0.58 >More info 0.38 >More info UV aerial region Original data GEO bulk
278 Col-0 INA 6d 0.55 >More info 0.41 >More info Col-0 MOCK 6d Original data GEO bulk
279 LTN008-2 aza-dc 0.62 >More info 0.34 >More info LTN012-2 Mock Original data
280 phr1 phl1 Root-Pi 0.64 >More info 0.32 >More info WT Shoot+Pi roots Original data GEO bulk
281 15m.KNO3 0.41 >More info 0.55 >More info To. KNO3 14 day old Roots Original data GEO bulk
282 35S:RPS4 eds1-2 2h -0.37 >More info -0.59 >More info 35S:RPS4 2h leaves Original data
283 9 hr Hypoxia IP RNA 0.62 >More info 0.33 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
284 sfr3 cold 0.50 >More info 0.45 >More info WT cold All aerial tissue Original data GEO bulk
285 penta Control 0.58 >More info 0.37 >More info Laer Control leaf discs Original data GEO bulk
286 Mutant arf2-6 -0.59 >More info -0.36 >More info Col Original data GEO bulk
287 ceh1 mutant 0.62 >More info 0.33 >More info Parent line Original data
288 GO5; harvested 8h continiously maintained in high
CO2;		 0.54 >More info 0.41 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
289 15m.KCl 0.60 >More info 0.35 >More info To. KCl 14 day old Roots Original data GEO bulk
290 gpa1 -ABA GC -0.43 >More info -0.52 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
291 SA 0.64 >More info 0.30 >More info WT mock Whole seedling Original data GEO bulk
292 shoots WT 0uM Fe 0.71 >More info 0.23 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
293 ARR22-ox (t-zeatin 3 h) 0.61 >More info 0.33 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
294 Laer pretreat GA Flg22 1h 0.23 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
295 cop1 Seedling Dark -0.42 >More info -0.52 >More info WT Seedling Dark Original data GEO bulk
296 tor mutant glucose 0.54 >More info 0.39 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
297 arf2 brz -0.54 >More info -0.39 >More info arf2 mock Original data GEO bulk
298 short 10-degree- 0.58 >More info 0.35 >More info control short Original data GEO bulk
299 short 8-degree- 0.58 >More info 0.35 >More info control short Original data GEO bulk
300 plant (tga2-5-6) 4h phytoprostane A1 0.63 >More info 0.30 >More info plant (tga2-5-6) 4h control Original data GEO bulk
301 csn5 (csn5a-2 csn5b) light 0.59 >More info 0.34 >More info WT light Original data GEO bulk
302 8h-DC3000 avrRpm1 0.59 >More info 0.34 >More info 8h-DC3000 leaves Original data GEO bulk
303 Blue Light 4 h 0.42 >More info 0.51 >More info White Light 4 h Original data Light treatments
304 Mutant ein2(leaf) -0.32 >More info -0.61 >More info Col-0 (leaf) Original data GEO bulk
305 seedling 3h after Gamma WT 0.56 >More info 0.36 >More info seedling day 1 unirradiated WT 3h Original data
306 cov1 cov2 stem Top -0.54 >More info -0.38 >More info WT stem Top stem Top Original data GEO bulk
307 root stele pH4.6 0.35 >More info 0.57 >More info root stele pH5.7 Original data GEO bulk
308 tbf1-SA -0.34 >More info -0.58 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
309 TiO2 germinant -0.51 >More info -0.40 >More info Millipore Water germinant TiO2 seedling Original data
310 DC3000 7h 0.54 >More info 0.37 >More info Mock 7h DC3000 Original data GEO bulk
311 root columella root cap 40 mM NaCl 0.56 >More info 0.35 >More info root columella root cap Original data GEO bulk
312 Col-0 SA 0.51 >More info 0.40 >More info Col-0 Original data GEO bulk
313 lht1 PstDC3000 48h 0.51 >More info 0.40 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
314 gpa1 +ABA GC -0.38 >More info -0.53 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
315 SCR-GR Time 12H Dex 0.60 >More info 0.31 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
316 WT roots - Fe 0.58 >More info 0.33 >More info WT roots + Fe Roots Original data GEO bulk
317 amiR-tor induced 6d 0.60 >More info 0.31 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
318 ACC 3 h 0.29 >More info 0.62 >More info Mock 3 h Original data Basic hormone treatment of seedlings
319 rosette leaves fdh 0.56 >More info 0.34 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
320 E.coli 0157 H7 7h 0.34 >More info 0.56 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
321 cov1 cov2 stem Base 0.51 >More info 0.39 >More info WT stem Base stem Base Original data GEO bulk
322 penta MeJA 1h 0.55 >More info 0.35 >More info Laer MeJA 1h leaf discs Original data GEO bulk
323 Elevated CO2 expanding leaf 0.52 >More info 0.38 >More info Ambient CO2 expanding leaf expanding leaf Original data
324 Leafminer locally damaged thaliana seedlings 0.60 >More info 0.30 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
325 Laer pretreat JA Flg22 0h 0.55 >More info 0.34 >More info Laer pretreat water control leaf discs Original data GEO bulk
326 edr1 36 h powdery mildew 0.56 >More info 0.33 >More info Col-0 36 h powdery mildew Original data GEO bulk
327 npr1-3 DCA 48h 0.33 >More info 0.56 >More info npr1-3 MOCK 48h Original data GEO bulk
328 Whole root - low pH 3H 0.50 >More info 0.39 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
329 downy mildew cotyledons late stage 0.62 >More info 0.27 >More info mock inoculated Cotyledons Original data GEO bulk
330 PAHs stress 0.54 >More info 0.35 >More info exp control phenanthrene whole plants Original data GEO bulk
331 Shoot submergence 24h 0.57 >More info 0.32 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
332 miR393 flg22 2h 0.30 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
333 pnp1-1 1wk -P 0.54 >More info 0.34 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
334 ced1 -0.56 >More info -0.32 >More info WT PEG 6hr seedlings Original data GEO bulk
335 phr1 Root-Pi 0.53 >More info 0.35 >More info WT Root+Pi roots Original data GEO bulk
336 exo70A1 0.62 >More info 0.26 >More info Col-0 whole plant Original data GEO bulk
337 WT 1mM phosphate 8 hours. -0.58 >More info -0.30 >More info WT control (not supplemented). Original data
338 Time-0 chr11-1chr17-1 -0.56 >More info -0.31 >More info Time-0 Col-0 leaf explants Original data
339 HSP90 Reduced RNAi-A3 0.56 >More info 0.31 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
340 35S::HRE1 Hypoxic -0.50 >More info -0.37 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
341 leaf blade in FRD 0.51 >More info 0.36 >More info leaf blade in WL leaf blades Original data GEO bulk
342 Norflurazon 0.37 >More info 0.50 >More info Col-0 Original data GEO bulk
343 Norflurazon 0.37 >More info 0.50 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
344 ice1 6H Cold 0.57 >More info 0.30 >More info WT 6H Cold Original data GEO bulk
345 4d red light grown hmr-5 seedlings 0.58 >More info 0.29 >More info 4d red light grown WT(Col-0) seedlings Original data
346 cpr5npr1 0.53 >More info 0.33 >More info WT(COL) Original data GEO bulk
347 gun1-9 norflurazon 0.51 >More info 0.35 >More info gun1-9 control Original data GEO bulk
348 pil5 red light 0.58 >More info 0.28 >More info Col-0 red light Original data GEO bulk
349 rosettes WT drought 0.59 >More info 0.27 >More info rosettes WT watered Original data GEO bulk
350 rosette Light Wounded 0.50 >More info 0.36 >More info rosette Light Control Original data GEO bulk
351 2 h EST 0.36 >More info 0.50 >More info mock 2 h EST seedling Original data GEO bulk
352 Nicotinamide-85hr 0.57 >More info 0.29 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
353 des1 water 0.57 >More info 0.29 >More info WT water water leaf Original data GEO bulk
354 CMV-A2b mutant 0.55 >More info 0.30 >More info Mock-At Aerial tissues Original data GEO bulk
355 9 hr Hypoxia 1 hr recovery IP RNA 0.56 >More info 0.29 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
356 root epidermis and lateral root cap pH4.6 0.30 >More info 0.55 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
357 P.syringae vir 4 h (leaf) 0.28 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
358 agb1 -ABA GC -0.27 >More info -0.58 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
359 camta3-2 0.52 >More info 0.32 >More info WT Original data GEO bulk
360 ice1 24H Cold 0.56 >More info 0.28 >More info WT 24H Cold Original data GEO bulk
361 toc1-1-77hr 0.56 >More info 0.28 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
362 4C 0h 0.55 >More info 0.29 >More info 22C 0h Original data GEO bulk
363 Pto inoculated 0.56 >More info 0.28 >More info col Original data GEO bulk
364 GA 0.33 >More info 0.51 >More info none GA Rosette Original data GEO bulk
365 bak1-3 +Pep2 2h 0.28 >More info 0.56 >More info WT +Pep2 2h Pep2 Original data GEO bulk
366 sps1 -0.63 >More info -0.21 >More info WT seedling Original data GEO bulk
367 ws 24h4c q8ws 0.54 >More info 0.29 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
368 NAA -AA 0.52 >More info 0.31 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
369 WT-drought 0.51 >More info 0.32 >More info WT-control leaf Original data
370 Cold Stress 24 h (root) 0.52 >More info 0.31 >More info Stress mock 24 h (root) Original data Stress treatments
371 cat2-short-day 4d 0.33 >More info 0.50 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
372 whole roots -Fe 72 hour 0.53 >More info 0.29 >More info whole roots standard Original data GEO bulk
373 ice1 3H Cold 0.54 >More info 0.28 >More info WT 3H Cold Original data GEO bulk
374 Fe starvation 72 h 0.53 >More info 0.29 >More info Control Original data GEO bulk
375 Dark 3day ivd 0.57 >More info 0.25 >More info 0h ivd Original data
376 IAA7mII over-expressor IAA Treated 0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
377 AFB1 0h 0.50 >More info 0.31 >More info Col 0h Leaf Original data GEO bulk
378 rosette Dark Wounded 0.51 >More info 0.30 >More info rosette Dark Control Original data GEO bulk
379 9 hr Hypoxia 1 hr recovery Total RNA 0.53 >More info 0.28 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
380 Col-0 mbs1-1 HL 0h 0.56 >More info 0.25 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
381 Cold Stress 24 h (shoot) 0.55 >More info 0.26 >More info Stress mock 24 h (shoot) Original data Stress treatments
382 (Col-0)+200 uM As 0.54 >More info 0.27 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
383 Brassinolide 3 h (det2) -0.29 >More info -0.52 >More info Mock 3 h (det2) Original data Basic hormone treatment of seedlings
384 Ibuprofen 3 h 0.23 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
385 tunicamycin -0.65 >More info -0.15 >More info DMF Original data GEO bulk
386 root stele 40 mM NaCls 0.56 >More info 0.24 >More info root stele Original data GEO bulk
387 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.64 >More info 0.16 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
388 WT 24H Cold 0.52 >More info 0.28 >More info WT control Original data GEO bulk
389 Chitosan 3h Treatment 0.29 >More info 0.51 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
390 toc1-1-93hr 0.24 >More info 0.56 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
391 gpa1 +ABA LF 0.28 >More info 0.52 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
392 dcl2-1 0.55 >More info 0.24 >More info Col-0 Original data GEO bulk
393 Col-0 low oxygen 0.59 >More info 0.20 >More info Col-0 Original data GEO bulk
394 low CO2 + dark 0.59 >More info 0.20 >More info normal CO2 + light Original data GEO bulk
395 ckh1 CK200 0.29 >More info 0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
396 petiole in FRD 0.58 >More info 0.21 >More info petiole in WL petioles Original data GEO bulk
397 SA Treated 0.71 >More info 0.08 >More info Water Original data GEO bulk
398 aerial organ callus inducing medium 12 h 0.58 >More info 0.20 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
399 arp6-10 24h at 27 ºC 0.55 >More info 0.23 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
400 aerial organ callus inducing medium 48 h 0.62 >More info 0.16 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
401 cdkf:1-2 0.63 >More info 0.14 >More info wt seedling young seedlings Original data GEO bulk
402 ASL9-ox -0.59 >More info -0.18 >More info WT aerial parts of seedlings Original data GEO bulk
403 Laer pretreat JA Flg22 1h 0.57 >More info 0.19 >More info Laer pretreat water control leaf discs Original data GEO bulk
404 Col upon hypoxia 6 hrs 0.50 >More info 0.26 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
405 rosettes myoox drought 0.61 >More info 0.15 >More info rosettes myoox watered Original data GEO bulk
406 Heat and anoxia 0.56 >More info 0.20 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
407 WT mitomycin C 0.54 >More info 0.22 >More info WT mock shoot apical meristem Original data
408 root longitudinal zone-4 low sulfur -0.51 >More info -0.25 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
409 SCR 24hr-S 0.25 >More info 0.51 >More info SCR 0hr endodermis Original data
410 Laer pretreat GA+JA Flg22 0h 0.59 >More info 0.16 >More info Laer pretreat water control leaf discs Original data GEO bulk
411 SHR-GR Time 1H Dex 0.55 >More info 0.20 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
412 root longitudinal zone-2 low sulfur -0.57 >More info -0.18 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
413 IAA 1h -0.64 >More info -0.11 >More info control 1h root Original data GEO bulk
414 bio4-1 mutant leaves 0.51 >More info 0.24 >More info WT leaves leaves Original data GEO bulk
415 8-DAC chr11-1chr17-1 0.50 >More info 0.25 >More info 8-DAC Col-0 leaf explants Original data
416 WT no Pi 0.52 >More info 0.23 >More info WT complete seedlings Original data
417 35S:RPS4 rrs1-11 8h -0.52 >More info -0.23 >More info 35S:RPS4 8h leaves Original data
418 Col-0 DCA 48h 0.22 >More info 0.53 >More info Col-0 MOCK 48h Original data GEO bulk
419 mbd6 mutant thaliana 10-day-old seedling 0.50 >More info 0.24 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
420 bam8 untreated -0.51 >More info -0.23 >More info WT untreated none shoot Original data
421 GRX-overexpression seedlings control 0.53 >More info 0.21 >More info WT seedlings control Seedlings Original data GEO bulk
422 phyB mutant 16C 4hrs 0.23 >More info 0.51 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
423 mbd4 mutant thaliana 10-day-old seedling 0.54 >More info 0.19 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
424 dor control 0.53 >More info 0.20 >More info WT control Original data GEO bulk
425 root endodermis and quiescent center 40 mM NaCl 0.50 >More info 0.23 >More info root endodermis and quiescent center Original data GEO bulk
426 4C 1h 0.13 >More info 0.60 >More info 4C 0h Original data GEO bulk
427 bbx24 in Simulated Shade -0.53 >More info -0.19 >More info WT in simulated shade shade seedling Original data
428 light -0.54 >More info -0.18 >More info dark light seedling Original data GEO bulk
429 Col-0 24hpi A. brassicicola 0.70 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
430 SCR 48hr-S 0.22 >More info 0.50 >More info SCR 0hr endodermis Original data
431 vte2 leaves 48h LT 0.67 >More info 0.04 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
432 pip3 At2g19270 TDNA 9 0.50 >More info 0.21 >More info Col-0 whole plant Original data GEO bulk
433 essp4/sdg8-5 mutant 0.58 >More info 0.13 >More info wild type leaf Original data GEO bulk
434 sid2-2 mock 0.52 >More info 0.19 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
435 Myzus persicae saliva 0.50 >More info 0.21 >More info Control Original data GEO bulk
436 aphid saliva treated 0.50 >More info 0.21 >More info control aphid saliva treated leaves Original data GEO bulk
437 IAA 12h -0.52 >More info -0.19 >More info control 12h root Original data GEO bulk
438 TaFLS overexpression line (OE1) -0.54 >More info -0.16 >More info Col-0 Rosette leaves Original data
439 siliques AtHb1 control 0.18 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
440 overexpresser LBD38 in -N -0.55 >More info -0.14 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
441 tor mutant 0.52 >More info 0.17 >More info WT (Col) none seedlings Original data GEO bulk
442 WT light -0.52 >More info -0.17 >More info WT dark Original data GEO bulk
443 seedling -S Exp 0.68 >More info 0.01 >More info seedling FN Exp seedling Original data
444 phyABDE Rc50 -0.51 >More info -0.18 >More info phyABDE Dark red light whole seedling Original data GEO bulk
445 aerial organ callus inducing medium 24h 0.61 >More info 0.08 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
446 Col-0-3h IAA 0.51 >More info 0.17 >More info Col-0-0h IAA whole plant Original data GEO bulk
447 24h volatiles Sm. R3089 -0.50 >More info -0.18 >More info 24h untreated whole seedling Original data GEO bulk
448 Heat shock optimum 0.02 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
449 Col-0 2h NAA 0.52 >More info 0.14 >More info Col-0 6h MOCK Original data GEO bulk
450 Rose Bengal 0.5 uM 0.14 >More info 0.51 >More info Control RB and PER Rose Bengal Original data
451 express RfBP -0.59 >More info -0.06 >More info WT green part of the whole plant Original data GEO bulk
452 root longitudinal zone-1 low sulfur -0.58 >More info -0.07 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
453 WT 6H Cold 0.52 >More info 0.12 >More info WT control Original data GEO bulk
454 flu dark 8hours/30 minute light 0.00 >More info 0.63 >More info col dark 8hours/30 minute light Original data GEO bulk
455 P35S:rGRF1 -0.55 >More info -0.07 >More info Col-0 Original data GEO bulk
456 edr1 0 h powdery mildew 0.53 >More info 0.09 >More info Col-0 0 h powdery mildew Original data GEO bulk
457 HairpinZ 4 h (leaf) 0.65 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
458 BAM8 Ox untreated -0.04 >More info -0.57 >More info WT untreated none shoot Original data
459 Mutant hy5 (High Light) 0.50 >More info 0.10 >More info Col-0 (High Light) Original data GEO bulk
460 pvip1 pvip2 seedling 0.62 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
461 hy5 high light 0.50 >More info 0.10 >More info Col-O high light Original data GEO bulk
462 rao1-2 0.64 >More info -0.04 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
463 F1 whole seedlings root 0.53 >More info 0.06 >More info Col whole seedlings root Seedlings Original data GEO bulk
464 vte2 leaves 120h LT 0.55 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
465 grf1/grf2/grf3 0.50 >More info 0.09 >More info WS Original data GEO bulk
466 whole roots -Fe 6 hour 0.02 >More info 0.56 >More info whole roots standard Original data GEO bulk
467 Col-0 wt Hypoxic 0.51 >More info 0.06 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
468 CCA1-ox 6am non-polysomal 0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
469 Shoot submergence 7h 0.57 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
470 WT Shoot-Pi 0.55 >More info 0.01 >More info WT Shoot+Pi shoots Original data GEO bulk
471 GST-overexpression seedlings control 0.65 >More info -0.09 >More info WT seedlings control Seedlings Original data
472 Ambient CO2 leaf primordia -0.50 >More info -0.05 >More info Control for tissue data leaf primordia Original data
473 overexpresser LBD37 in -N -0.52 >More info -0.03 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
474 EBE-XVE +estradiol -0.01 >More info 0.56 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
475 control leaf (cmt 5d) 0.01 >More info -0.56 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
476 Col PSTDC3000 24h 0.67 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
477 albino Ds13-2198-1 -0.52 >More info -0.01 >More info control Original data GEO bulk
478 C2 leaf-drought 0.50 >More info 0.03 >More info C2 leaf-well watered Original data GEO bulk
479 P. infestans 6 h (leaf) 0.67 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
480 atmyc2 Seedling Dark -0.02 >More info -0.50 >More info WT Seedling Dark Original data GEO bulk
481 3x(m) -0.12 >More info 0.64 >More info 2x two week old seedlings Original data
482 Elevated CO2 LIMITING N DAY 0.55 >More info -0.05 >More info Elevated CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
483 ARR21C-ox 0.51 >More info -0.01 >More info Col-0 Original data ARR21C overexpression
484 agb1 gpa1 -ABA LF -0.00 >More info -0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
485 IAA 3 h 0.50 >More info -0.01 >More info Mock 3 h Original data Basic hormone treatment of seedlings
486 Bay-0-30min IAA 0.53 >More info -0.06 >More info Bay-0-0h IAA whole plant Original data GEO bulk
487 Mh0 UV -0.50 >More info 0.06 >More info Mh0 mock UV seedling Original data
488 cat2-hCO2 -0.58 >More info 0.17 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
489 Light 3day hml -0.57 >More info 0.17 >More info 0h hml Original data
490 seed germinating in countinuous light 24h SL -0.30 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
491 WT 30μM phosphate 8 hours. -0.57 >More info 0.24 >More info WT control (not supplemented). Original data
492 WT NAA 1h 0.51 >More info -0.25 >More info WT 0h Leaf tissue Original data GEO bulk
493 Shoot apex inflorescence (after bolting) -0.43 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
494 bri1-116 -0.63 >More info 0.73 >More info Col seedling Original data GEO bulk