4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-0-avrB-6h
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List of experiments correlated with "Col-0-avrB-6h"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0-avrB-6h		 Correlation to
Col-0-avrB-6h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0-avrB-6h 1.00 >More info 1.00 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
2 HopZ1a treated 0.86 >More info 0.84 >More info col Original data GEO bulk
3 HopZ1a treated ulp1c ulp1d 0.85 >More info 0.83 >More info col Original data GEO bulk
4 Pto inoculated 0.84 >More info 0.80 >More info col Original data GEO bulk
5 AvrRpt2 Col-0 6hpi 0.83 >More info 0.79 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
6 Lipopolysaccaride4 h (leaf) 0.80 >More info 0.82 >More info Mock 4 h (leaf) Original data Elicitor treatments
7 P.syringae AvrRpt2 4 h (leaf) 0.78 >More info 0.80 >More info Mock 4 h (leaf) Original data Elicitor treatments
8 col-5 hrpA 12h 0.77 >More info 0.79 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
9 WT Col-0 Bgh inoculated 0.76 >More info 0.80 >More info WT Col-0 Un-inoculated Original data GEO bulk
10 WT 2-4h Xanthomonas 0.77 >More info 0.78 >More info WT T0 Original data GEO bulk
11 Botrytis cinerea 48h 0.78 >More info 0.77 >More info control 48h Original data GEO bulk
12 Phaseolicola 2 h (leaf) 0.76 >More info 0.78 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
13 GST NPP1 4 h (leaf) 0.78 >More info 0.76 >More info Mock 4 h (leaf) Original data Elicitor treatments
14 col-5 DC3000 12h 0.76 >More info 0.78 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
15 ataf1-1 mutant Col-0 Bgh inoculated 0.75 >More info 0.79 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
16 hrcC 0.77 >More info 0.76 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
17 Col-0 9 hpi A. brassicicola 0.81 >More info 0.72 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
18 Cor hrpS 10h 0.79 >More info 0.74 >More info Mock 10h Cor hrpS Original data GEO bulk
19 hrpA 7h 0.78 >More info 0.75 >More info Mock 7h hrpA Original data GEO bulk
20 GST 4 h (leaf) 0.73 >More info 0.80 >More info Mock 4 h (leaf) Original data Elicitor treatments
21 flu over-tAPX 0.76 >More info 0.77 >More info WT Col Original data GEO bulk
22 ice1 control 0.75 >More info 0.77 >More info WT control Original data GEO bulk
23 DC3000 2 h (leaf) 0.76 >More info 0.76 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
24 Cor 10h 0.77 >More info 0.75 >More info Mock 10h Cor Original data GEO bulk
25 flu 0.75 >More info 0.76 >More info WT Col Original data GEO bulk
26 Flagellin 4 h (leaf) 0.78 >More info 0.73 >More info Mock 4 h (leaf) Original data Elicitor treatments
27 hrpA fliC 7h 0.82 >More info 0.69 >More info Mock 7h hrpA fliC Original data GEO bulk
28 Leafminer locally damaged thaliana seedlings 0.79 >More info 0.71 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
29 pepr1-1 Pepr2-3 +Pep2 2h -0.76 >More info -0.74 >More info WT +Pep2 2h Pep2 Original data GEO bulk
30 35S:RPS4 eds1-2 8h -0.75 >More info -0.75 >More info 35S:RPS4 8h leaves Original data
31 E.coli TUV86 2 fliC 7h 0.76 >More info 0.73 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
32 anac017-2 AntimycinA 3h -0.77 >More info -0.72 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
33 Wounding Stress3 h (shoot) 0.74 >More info 0.75 >More info Stress mock 3 h (shoot) Original data Stress treatments
34 E.coli 0157 H7 7h 0.75 >More info 0.73 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
35 8h-DC3000 avrRpm1 0.74 >More info 0.74 >More info 8h-DC3000 leaves Original data GEO bulk
36 Seedling KUA1-IOX est 0.67 >More info 0.80 >More info Seedling KUA1-IOX mock Original data
37 ein2-1 9 hpi A. brassicicola 0.77 >More info 0.70 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
38 DC3000 7h 0.71 >More info 0.75 >More info Mock 7h DC3000 Original data GEO bulk
39 Pst-DC3000(avrRpm1)-4hpi 0.70 >More info 0.76 >More info Pst-DC3000-4hpi Original data GEO bulk
40 sid2-2 9 hpi A. brassicicola 0.80 >More info 0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
41 IMI 4mM 0.80 >More info 0.65 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
42 ice1 6H Cold 0.71 >More info 0.74 >More info WT 6H Cold Original data GEO bulk
43 DFPM 0.73 >More info 0.72 >More info control Original data GEO bulk
44 SA 4mM 0.69 >More info 0.76 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
45 rosette Dark Wounded 0.73 >More info 0.71 >More info rosette Dark Control Original data GEO bulk
46 gh3.5-1D 48 hpi 0.75 >More info 0.69 >More info Col-0 uninoculated Original data GEO bulk
47 efr-1 +elf18 10h -0.73 >More info -0.71 >More info WT +elf18 10h elf18 Original data GEO bulk
48 AgNO3 3 h 0.75 >More info 0.69 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
49 mkk1/mkk2 24h BTH rep 0.77 >More info 0.67 >More info Col-0 24h BTH rep Original data GEO bulk
50 Col-0 under 4 days salt 0.75 >More info 0.68 >More info Col-0 under control 4 days salt treatment rosette Original data
51 AvrRpm1 2 h (leaf) 0.71 >More info 0.72 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
52 Mutant gh3.5-1D (AvrRpt2) 0.74 >More info 0.68 >More info Col-0 (AvrRpt2) Original data GEO bulk
53 ulp1c ulp1d +Pto 0.71 >More info 0.71 >More info ulp1c ulp1d mock Original data GEO bulk
54 35S:RPS4 eds1-2 24h -0.73 >More info -0.68 >More info 35S:RPS4 24h leaves Original data
55 Chitosan 3h Treatment 0.74 >More info 0.67 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
56 Shoot -Cs 0.56 >More info 0.84 >More info Control-shoot Original data GEO bulk
57 mpk6-ko Flg22 4h 0.71 >More info 0.69 >More info mpk6-ko H2O 4h Original data GEO bulk
58 Col0-PsmES4326-24hpi 0.79 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
59 35S::ERF104 Flg22 4h 0.71 >More info 0.69 >More info 35S::ERF104 H2O 4h Original data GEO bulk
60 WT-NOCO2 INFECTED 0.74 >More info 0.65 >More info WT-MOCK Original data GEO bulk
61 WT flg22 2h 0.68 >More info 0.71 >More info WT 0h Leaf tissue Original data GEO bulk
62 rosette Light Wounded 0.69 >More info 0.70 >More info rosette Light Control Original data GEO bulk
63 CMV-A2b mutant 0.69 >More info 0.70 >More info Mock-At Aerial tissues Original data GEO bulk
64 Col 3d 0.70 >More info 0.69 >More info Col CA Leaves Original data
65 Col-0 SA 0.69 >More info 0.70 >More info Col-0 Original data GEO bulk
66 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.78 >More info 0.60 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
67 Te ozone 0.77 >More info 0.61 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
68 CLO 4mM 0.71 >More info 0.66 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
69 seedlings protease IV 0.69 >More info 0.68 >More info seedlings nontreated control whole seedling Original data
70 CMP 4hr 0.72 >More info 0.65 >More info Acetone 4hr root Original data GEO bulk
71 ceh1 mutant 0.73 >More info 0.64 >More info Parent line Original data
72 gpa1-4/agb1-2 ozone 2d -0.73 >More info -0.64 >More info Col ozone 2d ozone Original data GEO bulk
73 Laer Alternaria 3dpi -0.72 >More info -0.64 >More info Laer Control leaf discs Original data GEO bulk
74 CMV-WT 0.72 >More info 0.64 >More info Mock-At Aerial tissues Original data GEO bulk
75 bak1-3 +Pep2 10h 0.70 >More info 0.66 >More info WT +Pep2 10h Pep2 Original data GEO bulk
76 WT 3h -P 0.73 >More info 0.63 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
77 +1.6 mM Tween 20 1 h. 0.59 >More info 0.77 >More info +distilled water 1 h. Original data GEO bulk
78 coi1-16 ein2 sid2 ctrl -0.77 >More info -0.59 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
79 CMP 24hr 0.71 >More info 0.65 >More info Acetone 24hr root Original data GEO bulk
80 Leafminer damaged seedlings 0.79 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
81 cat2-2; 8h switch to ambient CO2 concentrations; 0.66 >More info 0.69 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
82 pnp1-1 3h +P 0.79 >More info 0.56 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
83 Rsch 3d 0.71 >More info 0.64 >More info Rsch CA Leaves Original data
84 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.77 >More info 0.58 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
85 cpr5npr1svi1 0.66 >More info 0.69 >More info WT(COL) Original data GEO bulk
86 SLWF infested 0.67 >More info 0.68 >More info SLWF uninfested rosette tissue Original data GEO bulk
87 Sulfometuron EC50 0.73 >More info 0.62 >More info Carrier Original data GEO bulk
88 WT +elf18 2h 0.67 >More info 0.67 >More info WT untreated elf18 Original data GEO bulk
89 Col-0 ozone 0.78 >More info 0.56 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
90 shoots bhlh100/101 0uM Fe 0.72 >More info 0.62 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
91 erf104-ko Flg22 4h 0.64 >More info 0.70 >More info erf104-ko H2O 4h Original data GEO bulk
92 Laer treat paclobutrazol (PAC) 0.72 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
93 treated group 0.67 >More info 0.66 >More info Control group Original data
94 CT101 ozone 0.77 >More info 0.56 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
95 WT Bc inoculation 14h 0.79 >More info 0.54 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
96 WT-SA 0.70 >More info 0.63 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
97 seedlings-week-old RECA1-overexpressing
transgenic		 0.65 >More info 0.68 >More info seedlings-week-old Col-0 seedlings Original data
98 B.cinerea 18 h infection 0.68 >More info 0.65 >More info Mock 18 h Original data Botrytis cinerea infection
99 Botrytis cinerea 18h 0.68 >More info 0.65 >More info control 18h Original data GEO bulk
100 wt systemic wounding 0.69 >More info 0.64 >More info wt control leaves Original data GEO bulk
101 Shoot -K 0.67 >More info 0.65 >More info Control-shoot Original data GEO bulk
102 K starvation (shoot) 0.67 >More info 0.65 >More info Ws (shoot) Original data GEO bulk
103 ice1 3H Cold 0.72 >More info 0.60 >More info WT 3H Cold Original data GEO bulk
104 ice1 24H Cold 0.69 >More info 0.63 >More info WT 24H Cold Original data GEO bulk
105 rosette leaves fdh 0.63 >More info 0.69 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
106 Laer Flg22 1h 0.68 >More info 0.63 >More info Laer Control leaf discs Original data GEO bulk
107 coi1-2 0.65 >More info 0.66 >More info Col-0 mock Whole seedling Original data GEO bulk
108 Rsch 1d 0.67 >More info 0.64 >More info Rsch CA Leaves Original data
109 Te 1d 0.70 >More info 0.61 >More info Te CA Leaves Original data
110 WT 90-105 min Xanthomonas 0.66 >More info 0.65 >More info WT T0 Original data GEO bulk
111 Col-0 C2H4 24h 0.72 >More info 0.59 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
112 WT AntimycinA 3h 0.67 >More info 0.64 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
113 35S::PI ap3-3 35S::AP-GR +DEX 0.50 >More info 0.80 >More info 0hr DEX Original data GEO bulk
114 Fenclorim 4hr 0.68 >More info 0.62 >More info Acetone 4hr root Original data GEO bulk
115 leaf13 0.65 >More info 0.65 >More info unwounded leaves none Original data GEO bulk
116 msh1 albino 0.69 >More info 0.61 >More info WT aerial part Original data GEO bulk
117 bZIP1ko mutant N+Light- 0.57 >More info 0.73 >More info WT-sib N+Light- whole plant Original data GEO bulk
118 wrky33 Bc inoculation 14h 0.74 >More info 0.55 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
119 Col-0 Flg22 4h 0.67 >More info 0.62 >More info Col-0 H2O 4h Original data GEO bulk
120 pepr1-1 Pepr2-3 +Pep2 10h -0.67 >More info -0.62 >More info WT +Pep2 10h Pep2 Original data GEO bulk
121 vte2-1 3d vernalization 0.70 >More info 0.59 >More info WT 3d vernalization Original data GEO bulk
122 col-5 DC3000-avrRpm 4h 0.65 >More info 0.64 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
123 anac017-1 H2O2 3h -0.67 >More info -0.61 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
124 WT NAA/flg 1h 0.65 >More info 0.63 >More info WT 0h Leaf tissue Original data GEO bulk
125 TNT-seedlings 0.63 >More info 0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
126 rosette leaves lcr 0.62 >More info 0.66 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
127 Col ozone 3h 0.49 >More info 0.79 >More info Col clean-air 3h ozone Original data GEO bulk
128 npr1-1 SA -0.71 >More info -0.57 >More info Col-0 SA complete seedling Original data
129 ASL9-ox -0.70 >More info -0.58 >More info WT aerial parts of seedlings Original data GEO bulk
130 Osmotic Stress 24 h (shoot) 0.69 >More info 0.58 >More info Stress mock 24 h (shoot) Original data Stress treatments
131 dde2-2 9 hpi A. brassicicola 0.72 >More info 0.55 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
132 tunicamycin -0.61 >More info -0.66 >More info DMF Original data GEO bulk
133 col-5 hrpA 2h 0.61 >More info 0.66 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
134 pnp1-1 1wk +P 0.75 >More info 0.52 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
135 lht1 PstDC3000 48h 0.66 >More info 0.61 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
136 nia1nia2 0.66 >More info 0.61 >More info Col-0 whole seedlings Original data GEO bulk
137 PAHs stress 0.66 >More info 0.61 >More info exp control phenanthrene whole plants Original data GEO bulk
138 Col-Luc WT 3h antimycin A 0.65 >More info 0.62 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
139 Mutant siz1-3 (Drought) 0.67 >More info 0.59 >More info Col-0 (Drought) Original data GEO bulk
140 Col whole leaf 7dpi 0.61 >More info 0.65 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
141 IRP1-OE-Fe--shoot 0.67 >More info 0.59 >More info COL-0-Fe--shoot shoot Original data
142 WT flg22 1h 0.62 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
143 siz1-3 drought 0.67 >More info 0.59 >More info Col-0 drought Original data GEO bulk
144 penta Alternaria 3dpi 0.70 >More info 0.56 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
145 DC3000 24h 0.63 >More info 0.63 >More info Mock 24h DC3000 Original data GEO bulk
146 Elevated CO2 AMPLE N NIGHT 0.59 >More info 0.66 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
147 oligomycin 4 h 0.67 >More info 0.58 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
148 lht1 untreated 0.64 >More info 0.61 >More info WT untreated untreated leaf Original data GEO bulk
149 Laer Flg22 2h 0.69 >More info 0.56 >More info Laer Control leaf discs Original data GEO bulk
150 coi1-16 ein2 sid2 ozone 0.73 >More info 0.52 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
151 mkk1/mkk2 control rep 0.67 >More info 0.58 >More info Col-0 Time 0 rep Original data GEO bulk
152 Col-0 drought 0.68 >More info 0.57 >More info Col-0 control Original data GEO bulk
153 del1-1 mutant 5d uninfected 0.74 >More info 0.50 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
154 cpr5scv1 0.69 >More info 0.55 >More info WT(COL) Original data GEO bulk
155 mil4 BTH 0.66 >More info 0.58 >More info Col BTH rosettes Original data GEO bulk
156 Laer Flg22+GA 1h 0.66 >More info 0.58 >More info Laer Control leaf discs Original data GEO bulk
157 pvip1 pvip2 0.61 >More info 0.63 >More info Col-0 whole rosettes Original data GEO bulk
158 myb3 myb3r4d 0.65 >More info 0.59 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
159 pmr5 pmr6 0.63 >More info 0.60 >More info Col-0 Original data GEO bulk
160 WT +elf18 10h 0.67 >More info 0.56 >More info WT untreated elf18 Original data GEO bulk
161 miR393 flg22 2h 0.54 >More info 0.69 >More info WT 0h Leaf tissue Original data GEO bulk
162 Col-0 flu HL 3h 0.63 >More info 0.60 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
163 bio4-1 mutant leaves 0.54 >More info 0.69 >More info WT leaves leaves Original data GEO bulk
164 ERF96OE 0.61 >More info 0.62 >More info WT leaf Original data
165 scrm-D 0.68 >More info 0.54 >More info Col-0 WT whole seedling Original data GEO bulk
166 vte2 leaves 48h LT 0.66 >More info 0.56 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
167 Nicotinamide-53hr 0.70 >More info 0.52 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
168 cs26 long day 0.65 >More info 0.57 >More info Leaves-WT-LD leaf Original data GEO bulk
169 edr1 36 h powdery mildew 0.65 >More info 0.57 >More info Col-0 36 h powdery mildew Original data GEO bulk
170 DC3000 hrcC 2 h (leaf) 0.61 >More info 0.61 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
171 ARR22-ox (t-zeatin 3 h) 0.71 >More info 0.51 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
172 Laer pretreat GA Flg22 1h 0.50 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
173 aba3-1 0.50 >More info 0.71 >More info wt Original data GEO bulk
174 ABA DFPM 0.64 >More info 0.57 >More info control Original data GEO bulk
175 Col whole leaf 5dpi 0.57 >More info 0.64 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
176 pad4-PsmES4326-24hpi -0.66 >More info -0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
177 gpa1 -ABA GC -0.53 >More info -0.67 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
178 Te 3d 0.64 >More info 0.56 >More info Te CA Leaves Original data
179 Cold Stress 24 h (shoot) 0.67 >More info 0.53 >More info Stress mock 24 h (shoot) Original data Stress treatments
180 UV 0.68 >More info 0.52 >More info WT aerial region Original data GEO bulk
181 short 12-degree- 0.61 >More info 0.59 >More info control short Original data GEO bulk
182 Col leaves 48h LT 0.60 >More info 0.60 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
183 S58-2 0.59 >More info 0.61 >More info wt Original data GEO bulk
184 Cycloheximide 3 h 0.61 >More info 0.59 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
185 LTN008-2 aza-dc 0.69 >More info 0.51 >More info LTN012-2 Mock Original data
186 anac017-2 H2O2 3h -0.71 >More info -0.49 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
187 WT NAA/flg 2h 0.58 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
188 Ws 100mM NaCl 0.55 >More info 0.64 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
189 Laer Flg22+GA 2h 0.64 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
190 Ws leaf 100mM NaCl 0.55 >More info 0.64 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
191 Mutant coi1(leaf) -0.57 >More info -0.62 >More info Col-0 (leaf) Original data GEO bulk
192 WT resupplied Pi 4h 0.71 >More info 0.48 >More info WT complete seedlings Original data
193 cpr5 0.65 >More info 0.54 >More info WT seedling Original data GEO bulk
194 gun1gun5 far-red pretreated -0.60 >More info -0.59 >More info WT far-red pretreated Original data GEO bulk
195 Nicotinamide-57hr 0.67 >More info 0.52 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
196 long 17-degree- 0.47 >More info 0.72 >More info control long Original data GEO bulk
197 shoot-10 μM DEX- 3 hr 0.56 >More info 0.62 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
198 Col 1d 0.62 >More info 0.56 >More info Col CA Leaves Original data
199 Nicotinamide-73hr 0.65 >More info 0.53 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
200 safener treated 0.59 >More info 0.59 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
201 Elevated CO2 fully expanded leaf 0.62 >More info 0.55 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
202 chito-octamer 0.56 >More info 0.61 >More info Col Mock Original data GEO bulk
203 miR393 flg22 1h 0.52 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
204 AFB1 flg22 2h 0.60 >More info 0.57 >More info WT 0h Leaf tissue Original data GEO bulk
205 C24 ozone 0.68 >More info 0.49 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
206 aox1a(line) MLD stressed 0.68 >More info 0.49 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
207 cop1 Seedling BL 0.59 >More info 0.58 >More info WT Seedling BL Original data GEO bulk
208 petiole in D 0.59 >More info 0.58 >More info petiole in WL petioles Original data GEO bulk
209 AFB1 flg22 1h 0.56 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
210 6h +Pi -0.54 >More info -0.63 >More info 6h -Pi root Original data GEO bulk
211 Nicotinamide-85hr 0.64 >More info 0.52 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
212 aerial organ callus inducing medium 12 h 0.64 >More info 0.52 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
213 cpr5npr1 0.65 >More info 0.51 >More info WT(COL) Original data GEO bulk
214 cpr5 0.62 >More info 0.54 >More info WT(COL) Original data GEO bulk
215 current injection 0.47 >More info 0.69 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
216 WT+H2O2 0.51 >More info 0.64 >More info WT H2O2 Original data GEO bulk
217 root Dosed gold 0.64 >More info 0.51 >More info root No gold .125 mM gold 24 h roots Original data
218 Rsch 8h 0.54 >More info 0.61 >More info Rsch CA Leaves Original data
219 upf3 0.61 >More info 0.54 >More info WT whole plant Original data GEO bulk
220 0.125 mM gold 24 h 0.64 >More info 0.51 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
221 short 10-degree- 0.64 >More info 0.50 >More info control short Original data GEO bulk
222 1 h Light IP RNA -0.56 >More info -0.58 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
223 8hr-pH4.5 0.56 >More info 0.58 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
224 toc1-1-65hr 0.61 >More info 0.53 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
225 smg7b-1 0.61 >More info 0.53 >More info WT whole plant Original data GEO bulk
226 UV Stress 24 h (shoot) 0.59 >More info 0.55 >More info Stress mock 24 h (shoot) Original data Stress treatments
227 shoot-10 μM DEX- 6 hr 0.58 >More info 0.56 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
228 Col ozone 2d 0.59 >More info 0.55 >More info Col clean-air 2d ozone Original data GEO bulk
229 Nicotinamide-69hr 0.63 >More info 0.51 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
230 WT 24H Cold 0.60 >More info 0.54 >More info WT control Original data GEO bulk
231 Nicotinamide-81hr 0.69 >More info 0.45 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
232 short 8-degree- 0.69 >More info 0.45 >More info control short Original data GEO bulk
233 fls1-3 0.57 >More info 0.57 >More info Col-0 Rosette leaves Original data
234 GO5; 8h switch to ambient CO2 concentrations; 0.46 >More info 0.67 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
235 pho1 0.61 >More info 0.52 >More info Col2WT Original data GEO bulk
236 albino Ds13-2198-1 -0.64 >More info -0.49 >More info control Original data GEO bulk
237 Differentiation 12h 0.58 >More info 0.55 >More info Differentiation 0h leaves Original data
238 S15-118 0.58 >More info 0.55 >More info wt Original data GEO bulk
239 edr1 18 h powdery mildew 0.61 >More info 0.52 >More info Col-0 18 h powdery mildew Original data GEO bulk
240 35S:VND7-VP16-GR+CHX 0.49 >More info 0.64 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
241 abh1 -ABA 0.47 >More info 0.66 >More info Col-0 -ABA Original data GEO bulk
242 mkk2 24h BTH rep 0.54 >More info 0.58 >More info Col-0 24h BTH rep Original data GEO bulk
243 Atss3 Light4 -0.60 >More info -0.52 >More info Atss3 Dark0.5 Original data GEO bulk
244 sfr3 cold 0.53 >More info 0.59 >More info WT cold All aerial tissue Original data GEO bulk
245 toc1-1-49hr 0.56 >More info 0.56 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
246 Nicotinamide-49hr 0.64 >More info 0.48 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
247 dor drought 0.62 >More info 0.50 >More info WT drought Original data GEO bulk
248 WT+chitooctaose 0.50 >More info 0.62 >More info WT+water chitooctaose seedlings Original data GEO bulk
249 leaf blade in D 0.51 >More info 0.61 >More info leaf blade in WL leaf blades Original data GEO bulk
250 miR393 0h -0.45 >More info -0.67 >More info WT 0h Leaf tissue Original data GEO bulk
251 spx1 spx2 complete 0.67 >More info 0.44 >More info WT complete seedlings Original data
252 aerial organ callus inducing medium 48 h 0.67 >More info 0.44 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
253 Nicotinamide-93hr 0.64 >More info 0.47 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
254 WT 1wk -P 0.64 >More info 0.47 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
255 downy mildew cotyledons late stage 0.61 >More info 0.50 >More info mock inoculated Cotyledons Original data GEO bulk
256 rao2 H2O2 3h -0.62 >More info -0.49 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
257 Nicotinamide-65hr 0.64 >More info 0.47 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
258 Primisulfuron EC50 0.56 >More info 0.54 >More info Carrier (primisulfuron) Original data GEO bulk
259 plant (tga2-5-6) 4h OPDA 0.62 >More info 0.48 >More info plant (tga2-5-6) 4h control Original data GEO bulk
260 WT cold 0.62 >More info 0.48 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
261 chito-tetramer 0.49 >More info 0.61 >More info Col Mock Original data GEO bulk
262 Col BTH 0.43 >More info 0.67 >More info Col rosettes Original data GEO bulk
263 ein5-1 ski2-3 0.56 >More info 0.53 >More info Col-0 aerial tissue Original data
264 Nicotinamide-89hr 0.64 >More info 0.45 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
265 tt4 0.53 >More info 0.56 >More info Col-0 aerial part Original data
266 pmr5 0.53 >More info 0.56 >More info Col-0 Original data GEO bulk
267 4C 24h(SOIL) 0.57 >More info 0.52 >More info 4C 0h(SOIL) Original data GEO bulk
268 plant (tga2-5-6) 4h phytoprostane A1 0.62 >More info 0.47 >More info plant (tga2-5-6) 4h control Original data GEO bulk
269 WT 24h cold 0.59 >More info 0.49 >More info WT warm 24h cold entire aerial part Original data GEO bulk
270 Col-0 INA 48h 0.57 >More info 0.51 >More info Col-0 MOCK 48h Original data GEO bulk
271 GO5; 0h switch to ambient CO2 concentrations; -0.58 >More info -0.50 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
272 Col-0 48 hpi 0.55 >More info 0.53 >More info Col-0 uninoculated Original data GEO bulk
273 low CO2 + light 0.56 >More info 0.52 >More info normal CO2 + light Original data GEO bulk
274 R. solani AG8 0.58 >More info 0.50 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
275 aerial organ callus inducing medium 96 h 0.60 >More info 0.48 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
276 plant (Col-0) 4h OPDA 0.55 >More info 0.52 >More info plant (Col-0) 4h control Original data GEO bulk
277 OPDA 4 h 0.55 >More info 0.52 >More info Col-0 Original data GEO bulk
278 Triazolopyrimidine EC50 0.55 >More info 0.52 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
279 aerial organ callus inducing medium 24h 0.63 >More info 0.44 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
280 arf2 brz -0.55 >More info -0.52 >More info arf2 mock Original data GEO bulk
281 dTLEc systemic wounding -0.46 >More info -0.61 >More info wt systemic wounding leaves Original data GEO bulk
282 Fenclorim 24hr 0.58 >More info 0.49 >More info Acetone 24hr root Original data GEO bulk
283 long 14-degree- 0.59 >More info 0.48 >More info control long Original data GEO bulk
284 sid2-1 cold -0.59 >More info -0.48 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
285 JA 0.47 >More info 0.60 >More info Col-0 mock Whole seedling Original data GEO bulk
286 Transgenic LEC2GR Seedling 1h Dex 0.53 >More info 0.53 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
287 Phytoprostane A1 4 h 0.54 >More info 0.52 >More info Col-0 Original data GEO bulk
288 PBZ 0.56 >More info 0.50 >More info none PBZ Rosette Original data GEO bulk
289 Col leaf 100mM NaCl 0.54 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
290 Col leaf 100mM NaCl 0.54 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
291 Col 100mM NaCl 0.54 >More info 0.52 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
292 M6PR transgenic leaf 100mM NaCl -0.50 >More info -0.56 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
293 Cor 24h 0.54 >More info 0.52 >More info Mock 24h Cor Original data GEO bulk
294 CAX1/CAX3 mutant 0.52 >More info 0.54 >More info Col whole plant Original data GEO bulk
295 HARAP hypoxic 0.51 >More info 0.55 >More info hypoxic hypoxia Original data GEO bulk
296 WT powdery mildew 0.56 >More info 0.50 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
297 5-Triiodobenzoic acid3 h 0.56 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
298 Leafminer systemically damaged thaliana seedlings 0.55 >More info 0.51 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
299 short 14-degree- 0.54 >More info 0.52 >More info control short Original data GEO bulk
300 rosette leaves bdg 0.55 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
301 Salt Stress 24 h (root) 0.61 >More info 0.45 >More info Stress mock 24 h (root) Original data Stress treatments
302 Methyl Jasmonate 1 h 0.47 >More info 0.59 >More info Mock 1 h Original data Basic hormone treatment of seedlings
303 wavy 0.53 >More info 0.52 >More info WT Original data GEO bulk
304 Dark 3day ivd 0.60 >More info 0.45 >More info 0h ivd Original data
305 bHLH122 ox -0.50 >More info -0.55 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
306 miR 0h 0.43 >More info 0.62 >More info Col 0h Leaf Original data GEO bulk
307 bio4-1 mutant watered00µM biotin leaves -0.49 >More info -0.56 >More info bio4-1 mutant leaves leaves Original data GEO bulk
308 gai Control 0.57 >More info 0.48 >More info Laer Control leaf discs Original data GEO bulk
309 nia1nia2noa1-2 0.58 >More info 0.47 >More info Col-0 whole seedlings Original data GEO bulk
310 abi4-102 (II) 0.58 >More info 0.46 >More info Col (II) rosette Original data GEO bulk
311 WT in -N 0.55 >More info 0.49 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
312 P.p 30hai 0.50 >More info 0.54 >More info At-Control roots Original data GEO bulk
313 WT 6H Cold 0.56 >More info 0.48 >More info WT control Original data GEO bulk
314 ced1 -0.52 >More info -0.52 >More info WT PEG 6hr seedlings Original data GEO bulk
315 A. thaliana-A. lyrata hybrid -0.45 >More info -0.59 >More info A. thaliana mature leaves before flowering Original data GEO bulk
316 Laer pretreat GA+JA Flg22 0h 0.59 >More info 0.44 >More info Laer pretreat water control leaf discs Original data GEO bulk
317 sta1 0.57 >More info 0.46 >More info WT Original data GEO bulk
318 ORS1 induced 0.50 >More info 0.53 >More info mock-induced rosette leaves Original data GEO bulk
319 penta Pst DC3000 12hpi 0.55 >More info 0.48 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
320 Ba1 UV 0.52 >More info 0.51 >More info Ba1 mock UV seedling Original data
321 WT no Pi 0.58 >More info 0.45 >More info WT complete seedlings Original data
322 WT +Pep2 2h 0.68 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
323 toc1-1-57hr 0.52 >More info 0.51 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
324 TA induced 0.43 >More info 0.60 >More info Methanol TA Suspension cells Original data GEO bulk
325 Heat shock optimum 0.38 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
326 Laer pretreat JA Flg22 1h 0.62 >More info 0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
327 P.p 6hai 0.58 >More info 0.44 >More info At-Control roots Original data GEO bulk
328 upf1 0.56 >More info 0.46 >More info WT whole plant Original data GEO bulk
329 R. solani AG2-1 0.52 >More info 0.50 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
330 P.syringae vir 4 h (leaf) 0.60 >More info 0.42 >More info Mock 4 h (leaf) Original data Elicitor treatments
331 OE WRKY63.3 high light 0.45 >More info 0.57 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
332 WT chitooctaose 0.47 >More info 0.55 >More info WT water Original data GEO bulk
333 Total RNA csp1 cold 0.56 >More info 0.45 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
334 ws 24h4c q8ws 0.57 >More info 0.44 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
335 Nicotinamide-61hr 0.64 >More info 0.37 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
336 toc1-1-77hr 0.65 >More info 0.36 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
337 csn5 (csn5a-2 csn5b) light 0.61 >More info 0.40 >More info WT light Original data GEO bulk
338 oas-a1.1 Cd 24h 0.43 >More info 0.58 >More info Cd 24h root Shoot Original data GEO bulk
339 Leaf GLU1-KO 0.49 >More info 0.52 >More info Leaf Col(0) rosette leaves Original data GEO bulk
340 pnp1-1 1wk -P 0.65 >More info 0.35 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
341 P.p 10.5hai 0.51 >More info 0.49 >More info At-Control roots Original data GEO bulk
342 Mutant cry1 (High Light) -0.61 >More info -0.39 >More info Col-0 (High Light) Original data GEO bulk
343 penta Control 0.63 >More info 0.37 >More info Laer Control leaf discs Original data GEO bulk
344 cry1 high light -0.61 >More info -0.39 >More info Col-O high light Original data GEO bulk
345 atmyc2 cop1 Seedling BL 0.42 >More info 0.58 >More info WT Seedling BL Original data GEO bulk
346 Te 8h 0.48 >More info 0.52 >More info Te CA Leaves Original data
347 4C 7d(SOIL) 0.51 >More info 0.48 >More info 4C 0h(SOIL) Original data GEO bulk
348 ataf1-1 mutant Col-0 Un-inoculated -0.54 >More info -0.45 >More info WT Col-0 Un-inoculated Original data GEO bulk
349 Glyphosate EC50 0.50 >More info 0.49 >More info Carrier (Glyphosate) Original data GEO bulk
350 9 hr Hypoxia 1 hr recovery IP RNA 0.56 >More info 0.43 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
351 Dex-rga(delta17) 4h GA4 -0.42 >More info -0.57 >More info Vector 4h GA4 shoots Original data GEO bulk
352 Salt Stress 24 h (shoot) 0.53 >More info 0.45 >More info Stress mock 24 h (shoot) Original data Stress treatments
353 P.p 2.5hai 0.51 >More info 0.47 >More info At-Control roots Original data GEO bulk
354 Stem tissue 5 days NAA 0.50 >More info 0.48 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
355 Elevated CO2 AMPLE N DAY 0.56 >More info 0.42 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
356 1 h Light Total RNA -0.47 >More info -0.51 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
357 WT H2O2 3h 0.42 >More info 0.56 >More info WT water 3h 3h_H2O2 Original data GEO bulk
358 col-5 DC3000 4h 0.41 >More info 0.57 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
359 atmospheric CO2 high Mg shoot 0.54 >More info 0.43 >More info atmospheric CO2 normal Mg shoot Shoot Original data
360 shoots WT 0uM Fe 0.67 >More info 0.30 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
361 vtc1 (II) 0.51 >More info 0.46 >More info Col (II) rosette Original data GEO bulk
362 pnp1-1 3h -P 0.61 >More info 0.36 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
363 Cd 24h root -0.55 >More info -0.42 >More info WT-Untreated Shoot Original data GEO bulk
364 agb1 gpa1 +ABA GC -0.40 >More info -0.57 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
365 opr3 JA 2 h 0.33 >More info 0.64 >More info opr3 0 h Original data GEO bulk
366 leaf rlt1-1rlt2-1 -0.51 >More info -0.45 >More info leaf Col-0 leaf Original data GEO bulk
367 Laer pretreat JA Flg22 2h 0.58 >More info 0.38 >More info Laer pretreat water control leaf discs Original data GEO bulk
368 oas-a1.1 Cd 18h 0.45 >More info 0.51 >More info Cd 18h root Root Original data GEO bulk
369 cat2-hCO2 -0.46 >More info -0.50 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
370 OE WRKY40.4 high light 0.45 >More info 0.51 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
371 Mature callus 0.56 >More info 0.39 >More info Young callus hypocotyls Original data GEO bulk
372 AFB1 0h 0.52 >More info 0.43 >More info Col 0h Leaf Original data GEO bulk
373 M6PR transgenic 0mM NaCl 0.50 >More info 0.45 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
374 12h-DC3000 avrRpm1 0.52 >More info 0.43 >More info 12h-DC3000 leaves Original data GEO bulk
375 sng1 UV 0.54 >More info 0.41 >More info UV aerial region Original data GEO bulk
376 ckh1 CK200 0.50 >More info 0.45 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
377 8-DAC chr11-1chr17-1 0.58 >More info 0.37 >More info 8-DAC Col-0 leaf explants Original data
378 Cocultivation 8 hrs root 0.52 >More info 0.43 >More info Mock cocultivation 8 hrs root Root Original data
379 sfr2 control -0.51 >More info -0.44 >More info WT control All aerial tissue Original data GEO bulk
380 coi1-PsmES4326-24hpi -0.36 >More info -0.59 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
381 JA 3h 0.21 >More info 0.74 >More info EtOH 3h 3hr Original data GEO bulk
382 35S:RPS4 eds1-2 2h -0.38 >More info -0.57 >More info 35S:RPS4 2h leaves Original data
383 SCR-GR Time 12H Dex 0.56 >More info 0.38 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
384 4d red light grown hmr-5 seedlings 0.55 >More info 0.39 >More info 4d red light grown WT(Col-0) seedlings Original data
385 C24-3h IAA 0.56 >More info 0.38 >More info C24-0h IAA whole plant Original data GEO bulk
386 Col 8h 0.55 >More info 0.39 >More info Col CA Leaves Original data
387 Col-0 V. longisporum-inoculated 48 hpi 0.51 >More info 0.43 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
388 Myzus persicae saliva 0.57 >More info 0.37 >More info Control Original data GEO bulk
389 pap1-D/tt4 0.53 >More info 0.41 >More info Col-0 aerial part Original data
390 Col-0-3h IAA 0.57 >More info 0.37 >More info Col-0-0h IAA whole plant Original data GEO bulk
391 aphid saliva treated 0.57 >More info 0.37 >More info control aphid saliva treated leaves Original data GEO bulk
392 Bur-0-3h IAA 0.50 >More info 0.44 >More info Bur-0h IAA whole plant Original data GEO bulk
393 IAA7mII over-expressor IAA Treated 0.25 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
394 msh1 stunt 0.44 >More info 0.50 >More info WT Col-0 above ground part of plant Original data GEO bulk
395 camta1/2/3 24h cold 0.43 >More info 0.51 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
396 9 hr Hypoxia IP RNA 0.55 >More info 0.38 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
397 rosettes WT drought 0.56 >More info 0.37 >More info rosettes WT watered Original data GEO bulk
398 9 hr Hypoxia 1 hr recovery Total RNA 0.53 >More info 0.40 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
399 col-5 hrpA 4h 0.51 >More info 0.42 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
400 Cold Stress 24 h (root) 0.51 >More info 0.42 >More info Stress mock 24 h (root) Original data Stress treatments
401 Atwrky63 -0.64 >More info -0.28 >More info Col0 none leaf Original data GEO bulk
402 Laer pretreat GA+JA Flg22 1h 0.54 >More info 0.38 >More info Laer pretreat water control leaf discs Original data GEO bulk
403 smg5-2 0.54 >More info 0.38 >More info WT whole plant Original data GEO bulk
404 scrm-D:mute 0.53 >More info 0.39 >More info Col-0 WT whole seedling Original data GEO bulk
405 oligomycin 1 h 0.36 >More info 0.56 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
406 D2O 0.57 >More info 0.35 >More info H2O seedling Original data GEO bulk
407 IRP1-OE-Ctrl--root 0.41 >More info 0.51 >More info COL-0-Ctrl--root root Original data
408 csn3-1 light 0.56 >More info 0.35 >More info WT light Original data GEO bulk
409 WT-elf18 0.50 >More info 0.41 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
410 WT roots - Fe 0.59 >More info 0.32 >More info WT roots + Fe Roots Original data GEO bulk
411 toc1-1-53hr 0.56 >More info 0.34 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
412 Nicotinamide-77hr 0.50 >More info 0.40 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
413 4C 2h(SOIL) 0.50 >More info 0.40 >More info 4C 0h(SOIL) Original data GEO bulk
414 Light 3day wt -0.54 >More info -0.36 >More info 0h wt Original data
415 Imidazolinone EC50 0.38 >More info 0.52 >More info Carrier (Imidazolinone) Original data GEO bulk
416 rcf1-1 cold 24h 0.54 >More info 0.35 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
417 col 24h4c set4 0.50 >More info 0.39 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
418 1h +Pi -0.38 >More info -0.51 >More info 1h -Pi root Original data GEO bulk
419 agb1 gpa1 -ABA GC -0.30 >More info -0.59 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
420 Stem tissue 2 days NAA 0.32 >More info 0.56 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
421 P35S:rGRF3 0.53 >More info 0.35 >More info WS Original data GEO bulk
422 ARR21C-ox 0.53 >More info 0.34 >More info Col-0 Original data ARR21C overexpression
423 short 17-degree- 0.53 >More info 0.34 >More info control short Original data GEO bulk
424 RGA-GR-DEX 0.32 >More info 0.55 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
425 ani1 T0.5 -0.31 >More info -0.56 >More info WT T0.5 root tissue Original data GEO bulk
426 20d after anthesis 0.52 >More info 0.35 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
427 35:SUB1A 0.59 >More info 0.28 >More info WT whole seedling Original data GEO bulk
428 Laer pretreat GA+JA Flg22 2h 0.50 >More info 0.37 >More info Laer pretreat water control leaf discs Original data GEO bulk
429 flu dark 8hours/30 minute light 0.29 >More info 0.58 >More info col dark 8hours/30 minute light Original data GEO bulk
430 bZIP1ko mutant N+Light+ 0.52 >More info 0.34 >More info WT-sib N+Light+ whole plant Original data GEO bulk
431 Starch sheath 5 days MS incubation 0.33 >More info 0.53 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
432 CeO2 germinant -0.32 >More info -0.54 >More info Millipore Water germinant CeO2 seedling Original data
433 WT seedlings NaCl -0.50 >More info -0.36 >More info WT seedlings control Seedlings Original data GEO bulk
434 Selenate (root) 0.35 >More info 0.51 >More info Ws (root) Original data GEO bulk
435 opr3 OPDA 2 h 0.11 >More info 0.75 >More info opr3 0 h Original data GEO bulk
436 Root Selenate 0.35 >More info 0.51 >More info Root control 40 micromolar selenate Root Original data GEO bulk
437 NJ15 0.26 >More info 0.60 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
438 gpa1 -ABA LF 0.57 >More info 0.29 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
439 atmospheric CO2 low Mg shoot 0.55 >More info 0.30 >More info atmospheric CO2 normal Mg shoot Shoot Original data
440 GA 0.32 >More info 0.53 >More info none GA Rosette Original data GEO bulk
441 vtc2 (I) 0.50 >More info 0.35 >More info Col (I) rosette Original data GEO bulk
442 gun1-9 norflurazon 0.50 >More info 0.34 >More info gun1-9 control Original data GEO bulk
443 SHR-GR Time 1H Dex 0.56 >More info 0.28 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
444 AZC 0.55 >More info 0.29 >More info noneHS Original data GEO bulk
445 C2 leaf-drought 0.50 >More info 0.34 >More info C2 leaf-well watered Original data GEO bulk
446 abi4 vtc2 (I) 0.50 >More info 0.34 >More info Col (I) rosette Original data GEO bulk
447 6-trichlorophenoxyacetic acid 3 h 0.32 >More info 0.52 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
448 wnk8-2 untreated -0.31 >More info -0.53 >More info Col-0 untreated seedlings Original data GEO bulk
449 amiR-tor induced 6d 0.30 >More info 0.54 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
450 WT-Dry 0.25 >More info 0.59 >More info WT-CK dehydration treatment 1h Original data
451 mbd4 mutant thaliana 10-day-old seedling 0.53 >More info 0.30 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
452 Col-0-1h IAA 0.53 >More info 0.30 >More info Col-0-0h IAA whole plant Original data GEO bulk
453 Methyl Jasmonate 3 h 0.28 >More info 0.55 >More info Mock 3 h Original data Basic hormone treatment of seedlings
454 inhibitor A Treated 0.30 >More info 0.53 >More info Negative Control Original data GEO bulk
455 Mutant arf2-6 -0.56 >More info -0.26 >More info Col Original data GEO bulk
456 DUO1 induced 6h -0.67 >More info -0.15 >More info 6hr-not-induced whole plant Original data GEO bulk
457 ubc13A-es -0.54 >More info -0.28 >More info Col-es root Original data GEO bulk
458 Ibuprofen 3 h 0.26 >More info 0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
459 WT +Pep2 10h 0.53 >More info 0.28 >More info WT untreated Pep2 Original data GEO bulk
460 AtMYB30-ox 90-105 min Xanthomonas 0.51 >More info 0.30 >More info WT 90-105 min Xanthomonas Original data GEO bulk
461 Col in Pi deficiency medium 0.20 >More info 0.61 >More info Col in control medium root Original data GEO bulk
462 WT cold 12 h 0.52 >More info 0.28 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
463 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.63 >More info -0.17 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
464 atmyc2 Seedling BL -0.14 >More info -0.66 >More info WT Seedling BL Original data GEO bulk
465 rosettes myoox drought 0.50 >More info 0.29 >More info rosettes myoox watered Original data GEO bulk
466 rdr6-15 -0.50 >More info -0.29 >More info Col-0 Original data GEO bulk
467 Hydrogen Peroxide 500 uM 0.26 >More info 0.53 >More info Control RB and PER Hydrogen Peroxide Original data
468 rao1-1 3h antimycin A -0.51 >More info -0.27 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
469 WT 3H Cold 0.28 >More info 0.50 >More info WT control Original data GEO bulk
470 21h-DC3000 avrRpm1 -0.51 >More info -0.26 >More info 21h-DC3000 leaves Original data GEO bulk
471 IXB induced 0.25 >More info 0.52 >More info Methanol IXB Suspension cells Original data GEO bulk
472 Laer pretreat GA Flg22 0h 0.57 >More info 0.19 >More info Laer pretreat water control leaf discs Original data GEO bulk
473 light -0.57 >More info -0.18 >More info dark light seedling Original data GEO bulk
474 aba1 hypocotyl 0.25 >More info 0.50 >More info Ler hypocotyl hypocotyl Original data GEO bulk
475 HairpinZ 4 h (leaf) 0.77 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
476 npr1-3 MOCK 48h -0.23 >More info -0.51 >More info Col-0 MOCK 48h Original data GEO bulk
477 opr3 JA 0.5 h 0.05 >More info 0.69 >More info opr3 0 h Original data GEO bulk
478 35:SUB1C 0.52 >More info 0.21 >More info WT whole seedling Original data GEO bulk
479 Col-0 24hpi A. brassicicola 0.71 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
480 Col-0 DCA 48h 0.21 >More info 0.52 >More info Col-0 MOCK 48h Original data GEO bulk
481 WT cold 24h 0.51 >More info 0.21 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
482 siliques AtHb1 control 0.20 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
483 Protoplast Induced 0.17 >More info 0.54 >More info Uninduced Original data GEO bulk
484 psae1-3 stn7-1 0.51 >More info 0.20 >More info WS rosette leaves Original data GEO bulk
485 SA Treated 0.63 >More info 0.08 >More info Water Original data GEO bulk
486 phyABCDE 4-day dark- 2 hours Rc50 0.17 >More info 0.53 >More info phyABCDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
487 pistil 3.5HAP 0.62 >More info 0.08 >More info unpollinated pistil pistil Original data GEO bulk
488 wrky33 mock 0.55 >More info 0.13 >More info WT mock 14 hour mock control leaves Original data
489 CHS-silenced type -0.51 >More info -0.16 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
490 irradiated leaf (WT 1d) 0.55 >More info 0.11 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
491 sfr3 cold 0.52 >More info 0.14 >More info WT-cold aerial tissues Original data GEO bulk
492 ML (Mature leaves) 35DAS -0.52 >More info -0.14 >More info Control for tissue data Original data GEO bulk
493 WT cotyledons -0.54 >More info -0.12 >More info Control for tissue data cotyledons Original data
494 Ambient CO2 fully expanded leaf -0.51 >More info -0.15 >More info Control for tissue data fully expanded leaf Original data
495 Ambient CO2 expanding leaf -0.52 >More info -0.14 >More info Control for tissue data expanding leaf Original data
496 P-chlorophenoxy- isobutyric acid 3 h 0.10 >More info 0.56 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
497 Rosette leaf No12 -0.52 >More info -0.13 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
498 GST-overexpression seedlings control 0.59 >More info 0.06 >More info WT seedlings control Seedlings Original data
499 Whole root - low pH 1H 0.07 >More info 0.58 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
500 Col PSTDC3000 24h 0.77 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
501 abi1 hypocotyl 0.13 >More info 0.51 >More info Ler hypocotyl hypocotyl Original data GEO bulk
502 vte2 leaves 120h LT 0.59 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
503 gpa1-4/agb1-2 clean-air 3h -0.56 >More info -0.06 >More info Col clean-air 3h clean-air Original data GEO bulk
504 Rose Bengal 0.5 uM 0.07 >More info 0.55 >More info Control RB and PER Rose Bengal Original data
505 pvip1 pvip2 seedling 0.64 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
506 wnk8-1 untreated -0.08 >More info -0.54 >More info Col-0 untreated seedlings Original data GEO bulk
507 ABA JA 24h 0.11 >More info 0.50 >More info EtOH 24h 24hr Original data GEO bulk
508 amiRAP aerobic -0.00 >More info -0.61 >More info WT aerobic aerobic Original data GEO bulk
509 Constans-mutant 0.53 >More info 0.07 >More info Col control above-ground whole plant Original data GEO bulk
510 P. infestans 6 h (leaf) 0.74 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
511 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold 0.50 >More info 0.09 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
512 FLIGHT TAGESB plate6 ROOTS 0.08 >More info 0.51 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
513 cat2-short-day 4d 0.02 >More info 0.55 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
514 Leaf wounded 0.01 >More info 0.53 >More info Leaf control vegetative leaf Original data GEO bulk
515 red illumination +lincomycin -0.02 >More info 0.56 >More info red illumination -lincomycin Original data GEO bulk
516 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
517 xyl-grown cell culture- 1h 1mM Suc 0.09 >More info -0.59 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
518 coi1 0.08 >More info -0.58 >More info Col-0 Leaves Original data GEO bulk
519 penta Flg22 1h 0.52 >More info -0.05 >More info Laer Flg22 1h leaf discs Original data GEO bulk
520 Mh0 UV -0.50 >More info 0.04 >More info Mh0 mock UV seedling Original data
521 seed germinating in countinuous light 24h SL -0.23 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
522 WT NAA 1h 0.51 >More info -0.12 >More info WT 0h Leaf tissue Original data GEO bulk
523 bri1-116 -0.34 >More info 0.73 >More info Col seedling Original data GEO bulk
524 Lip0 UV 0.51 >More info -0.14 >More info Lip0 mock UV seedling Original data
525 Ambient CO2 LIMITING N DAY 0.52 >More info -0.18 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
526 Red/FR Light45min -0.18 >More info 0.51 >More info FarRed Light 45min Original data Light treatments
527 Shoot apex inflorescence (after bolting) -0.44 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
528 Light 3day hml -0.36 >More info 0.56 >More info 0h hml Original data