4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 4d red light grown hmr-5 seedlings
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List of experiments correlated with "4d red light grown hmr-5 seedlings"  Help Download transcriptome of top 30
Score Experiment Correlation from
4d red light grown hmr-5 seedlings		 Correlation to
4d red light grown hmr-5 seedlings		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 4d red light grown hmr-5 seedlings 1.00 >More info 1.00 >More info 4d red light grown WT(Col-0) seedlings Original data
2 seedling 1.5h after HZE atm-1 0.75 >More info 0.81 >More info seedling day 1 unirradiated atm-1 1.5h Original data
3 WT (Col) glucose -0.74 >More info -0.81 >More info WT (Col) glucose seedlings Original data GEO bulk
4 low CO2 + light 0.72 >More info 0.80 >More info normal CO2 + light Original data GEO bulk
5 Shoot dark control 24h 0.70 >More info 0.73 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
6 1 h Light Total RNA -0.69 >More info -0.74 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
7 Shoot submergence 24h 0.73 >More info 0.69 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
8 Nicotinamide-69hr 0.67 >More info 0.74 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
9 low CO2 + dark 0.66 >More info 0.75 >More info normal CO2 + light Original data GEO bulk
10 Shoot dark control 7h 0.70 >More info 0.71 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
11 Nicotinamide-73hr 0.69 >More info 0.72 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
12 IMI 4mM 0.66 >More info 0.73 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
13 SA 4mM 0.60 >More info 0.79 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
14 Col-0 C2H4 24h 0.69 >More info 0.70 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
15 Dark 3day ivd 0.72 >More info 0.66 >More info 0h ivd Original data
16 detached inflorescences 24h 0.67 >More info 0.71 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
17 CMP 24hr 0.68 >More info 0.70 >More info Acetone 24hr root Original data GEO bulk
18 Root submergence 24h 0.66 >More info 0.71 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
19 Root dark control 24h 0.67 >More info 0.70 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
20 gun4-1 0.70 >More info 0.66 >More info WT Col-0 seedling Original data GEO bulk
21 CMP 4hr 0.66 >More info 0.70 >More info Acetone 4hr root Original data GEO bulk
22 Dark 3day wt 0.71 >More info 0.65 >More info 0h wt Original data
23 Nicotinamide-93hr 0.68 >More info 0.67 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
24 Fenclorim 4hr 0.65 >More info 0.70 >More info Acetone 4hr root Original data GEO bulk
25 Root submergence 7h 0.66 >More info 0.69 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
26 seedling 1.5h after HZE WT 0.70 >More info 0.64 >More info seedling day 1 unirradiated WT 1.5h Original data
27 Root dark control 7h 0.62 >More info 0.71 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
28 Col-0 under 4 days salt 0.66 >More info 0.66 >More info Col-0 under control 4 days salt treatment rosette Original data
29 Dark 3day hml 0.71 >More info 0.61 >More info 0h hml Original data
30 sex1-3 0.58 >More info 0.73 >More info Col-WT leaves Original data GEO bulk
31 Dark 2day hml 0.72 >More info 0.59 >More info 0h hml Original data
32 Dark 6h ivd 0.68 >More info 0.63 >More info 0h ivd Original data
33 leaf blade in D 0.65 >More info 0.66 >More info leaf blade in WL leaf blades Original data GEO bulk
34 spch 0.67 >More info 0.63 >More info Col-0 WT whole seedling Original data GEO bulk
35 gh3.5-1D 48 hpi 0.60 >More info 0.69 >More info Col-0 uninoculated Original data GEO bulk
36 Nicotinamide-65hr 0.67 >More info 0.62 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
37 Dark 2day wt 0.71 >More info 0.58 >More info 0h wt Original data
38 Nicotinamide-49hr 0.68 >More info 0.60 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
39 WT AntimycinA 3h 0.64 >More info 0.64 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
40 Nicotinamide-53hr 0.62 >More info 0.65 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
41 rpoTmp(line) MLD stressed 0.63 >More info 0.64 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
42 AgNO3 3 h 0.57 >More info 0.70 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
43 cngc4 0.61 >More info 0.65 >More info Ws-2 Seedlings Original data GEO bulk
44 edr1 36 h powdery mildew 0.62 >More info 0.63 >More info Col-0 36 h powdery mildew Original data GEO bulk
45 pmr5 pmr6 0.56 >More info 0.68 >More info Col-0 Original data GEO bulk
46 1 h Light IP RNA -0.55 >More info -0.69 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
47 gun5 norflurazon 0.67 >More info 0.57 >More info gun5 control Original data GEO bulk
48 Col-0 9 hpi A. brassicicola 0.55 >More info 0.69 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
49 Pseudomonas 0.59 >More info 0.65 >More info Control pseudomonas treated whole seedling Original data GEO bulk
50 bak1-3 +Pep2 10h 0.61 >More info 0.62 >More info WT +Pep2 10h Pep2 Original data GEO bulk
51 Nicotinamide-89hr 0.64 >More info 0.59 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
52 Leafminer locally damaged thaliana seedlings 0.64 >More info 0.58 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
53 CMV-WT 0.62 >More info 0.60 >More info Mock-At Aerial tissues Original data GEO bulk
54 Col-0 48 hpi 0.58 >More info 0.64 >More info Col-0 uninoculated Original data GEO bulk
55 mkk1/mkk2 24h BTH rep 0.61 >More info 0.61 >More info Col-0 24h BTH rep Original data GEO bulk
56 Dark 1day ivd 0.67 >More info 0.54 >More info 0h ivd Original data
57 vte1-1 3d vernalization -0.63 >More info -0.58 >More info WT 3d vernalization Original data GEO bulk
58 pepr1-1 Pepr2-3 +Pep2 2h -0.62 >More info -0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
59 sfr6 control -0.69 >More info -0.52 >More info WT control All aerial tissue Original data GEO bulk
60 aox1a(line) MLD stressed 0.61 >More info 0.60 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
61 RGA-GR-DEX 0.54 >More info 0.67 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
62 Leafminer damaged seedlings 0.64 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
63 Dark 1day hml 0.66 >More info 0.54 >More info 0h hml Original data
64 6h +Pi -0.56 >More info -0.64 >More info 6h -Pi root Original data GEO bulk
65 Sulfometuron EC50 0.56 >More info 0.64 >More info Carrier Original data GEO bulk
66 Osmotic Stress 24 h (shoot) 0.57 >More info 0.63 >More info Stress mock 24 h (shoot) Original data Stress treatments
67 9 hr Hypoxia Total RNA 0.58 >More info 0.62 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
68 8h-DC3000 avrRpm1 0.57 >More info 0.63 >More info 8h-DC3000 leaves Original data GEO bulk
69 Fenclorim 24hr 0.58 >More info 0.61 >More info Acetone 24hr root Original data GEO bulk
70 cpr5scv1 0.59 >More info 0.60 >More info WT(COL) Original data GEO bulk
71 Day Time Treatment -0.58 >More info -0.61 >More info Day Time Control 1hr white light pulse aerial rosette Original data
72 toc1-1-77hr 0.51 >More info 0.68 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
73 gabaculin 0.59 >More info 0.60 >More info WT Col-0 seedling Original data GEO bulk
74 Col0-PsmES4326-24hpi 0.58 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
75 edr1 18 h powdery mildew 0.59 >More info 0.60 >More info Col-0 18 h powdery mildew Original data GEO bulk
76 ced1 -0.60 >More info -0.59 >More info WT PEG 6hr seedlings Original data GEO bulk
77 gun1-9 norflurazon 0.67 >More info 0.51 >More info gun1-9 control Original data GEO bulk
78 Nicotinamide-81hr 0.62 >More info 0.56 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
79 tor mutant glucose 0.57 >More info 0.61 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
80 TNT-seedlings 0.49 >More info 0.69 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
81 ptpks2 -0.49 >More info -0.69 >More info Col-WT leaves Original data GEO bulk
82 ein2-1 9 hpi A. brassicicola 0.54 >More info 0.63 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
83 rosettes WT drought 0.57 >More info 0.60 >More info rosettes WT watered Original data GEO bulk
84 camta1/2/3 warm 0.56 >More info 0.61 >More info WT warm entire aerial part Original data GEO bulk
85 Dark 1day wt 0.65 >More info 0.52 >More info 0h wt Original data
86 oligomycin 4 h 0.62 >More info 0.54 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
87 Nicotinamide-77hr 0.56 >More info 0.60 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
88 M6PR transgenic 0mM NaCl 0.56 >More info 0.60 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
89 Col-0 +lincomycin 0.53 >More info 0.62 >More info Col-0 -lincomycin Original data GEO bulk
90 aerial organ callus inducing medium 12 h 0.52 >More info 0.63 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
91 35S:RPS4 eds1-2 24h -0.55 >More info -0.60 >More info 35S:RPS4 24h leaves Original data
92 UV Stress 24 h (shoot) 0.56 >More info 0.59 >More info Stress mock 24 h (shoot) Original data Stress treatments
93 safener treated 0.54 >More info 0.61 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
94 gul2-1 mutant 0.57 >More info 0.58 >More info WT 7 day-old whole seedlings Original data
95 Col BTH 0.48 >More info 0.67 >More info Col rosettes Original data GEO bulk
96 Dark 6h wt 0.67 >More info 0.47 >More info 0h wt Original data
97 24h light (+Lincomycin) 0.54 >More info 0.60 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
98 hrpA 7h 0.49 >More info 0.65 >More info Mock 7h hrpA Original data GEO bulk
99 toc1-1-53hr 0.45 >More info 0.69 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
100 Nicotinamide-85hr 0.58 >More info 0.55 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
101 rcf1-1 cold 24h 0.52 >More info 0.61 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
102 Dark 6h hml 0.66 >More info 0.47 >More info 0h hml Original data
103 seedlings-week-old RECA1-overexpressing
transgenic		 0.54 >More info 0.59 >More info seedlings-week-old Col-0 seedlings Original data
104 Nicotinamide-57hr 0.57 >More info 0.56 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
105 flu over-tAPX 0.54 >More info 0.59 >More info WT Col Original data GEO bulk
106 Col whole leaf 5dpi 0.49 >More info 0.64 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
107 SCR-GR Time 1H Dex 0.41 >More info 0.72 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
108 ice1 control 0.50 >More info 0.62 >More info WT control Original data GEO bulk
109 RPL18 TuMV inoculated total RNA 0.55 >More info 0.57 >More info mock inoculated total RNA PO Original data GEO bulk
110 hrpA fliC 7h 0.51 >More info 0.61 >More info Mock 7h hrpA fliC Original data GEO bulk
111 DFPM 0.55 >More info 0.57 >More info control Original data GEO bulk
112 pvip1 pvip2 0.57 >More info 0.55 >More info Col-0 whole rosettes Original data GEO bulk
113 Uniconazole 12 h 0.51 >More info 0.61 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
114 ABA JA 24h 0.35 >More info 0.77 >More info EtOH 24h 24hr Original data GEO bulk
115 ABA control 0.37 >More info 0.75 >More info No ABA control Original data GEO bulk
116 tt4 0.55 >More info 0.56 >More info Col-0 aerial part Original data
117 Seedling KUA1-IOX est 0.53 >More info 0.58 >More info Seedling KUA1-IOX mock Original data
118 GST NPP1 4 h (leaf) 0.54 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
119 Flagellin 4 h (leaf) 0.53 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
120 petiole in D 0.57 >More info 0.54 >More info petiole in WL petioles Original data GEO bulk
121 8hr-pH4.5 0.49 >More info 0.62 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
122 max3GR24 (1 uM) -0.53 >More info -0.57 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
123 flu 0.54 >More info 0.56 >More info WT Col Original data GEO bulk
124 mbd4 mutant thaliana 10-day-old seedling 0.60 >More info 0.50 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
125 rosettes myoox drought 0.51 >More info 0.59 >More info rosettes myoox watered Original data GEO bulk
126 sni1 0.57 >More info 0.53 >More info WT Original data GEO bulk
127 ceh1 mutant 0.59 >More info 0.51 >More info Parent line Original data
128 anac017-2 AntimycinA 3h -0.56 >More info -0.54 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
129 gun1gun5 drak pretreated 0.59 >More info 0.51 >More info WT drak pretreated Original data GEO bulk
130 aerial organ callus inducing medium 48 h 0.54 >More info 0.56 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
131 Laer treat paclobutrazol (PAC) 0.57 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
132 GST 4 h (leaf) 0.53 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
133 SLWF infested 0.58 >More info 0.52 >More info SLWF uninfested rosette tissue Original data GEO bulk
134 col-5 hrpA 12h 0.51 >More info 0.58 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
135 HopZ1a treated ulp1c ulp1d 0.48 >More info 0.61 >More info col Original data GEO bulk
136 ice1 6H Cold 0.47 >More info 0.62 >More info WT 6H Cold Original data GEO bulk
137 ADD3 -0.49 >More info -0.60 >More info WT aerial part Original data GEO bulk
138 pnp1-1 3h +P 0.52 >More info 0.56 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
139 9 hr Hypoxia 1 hr recovery Total RNA 0.53 >More info 0.55 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
140 col-5 DC3000 12h 0.52 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
141 aerial organ callus inducing medium 96 h 0.52 >More info 0.56 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
142 Phytoprostane A1 4 h 0.49 >More info 0.59 >More info Col-0 Original data GEO bulk
143 rosette leaves fdh 0.47 >More info 0.61 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
144 E.coli TUV86 2 fliC 7h 0.49 >More info 0.59 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
145 sfr6 drought -0.48 >More info -0.60 >More info WT drought All aerial tissue Original data GEO bulk
146 WT (Col-0) inflorescence drought day 5 0.53 >More info 0.54 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
147 root Dosed gold 0.53 >More info 0.54 >More info root No gold .125 mM gold 24 h roots Original data
148 Col-0 norflurazon 0.55 >More info 0.52 >More info Col-0 control Original data GEO bulk
149 til1-1 22C 0.55 >More info 0.52 >More info Col-0 22C Original data GEO bulk
150 0.125 mM gold 24 h 0.53 >More info 0.54 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
151 Seedling-HeatStressed TOTALmRNA 0.54 >More info 0.53 >More info Seedling-control TOTALmRNA seedling Original data
152 Mutant gh3.5-1D (AvrRpt2) 0.45 >More info 0.62 >More info Col-0 (AvrRpt2) Original data GEO bulk
153 35S-MIF1 light grown 0.45 >More info 0.62 >More info Light-grown WT control Original data GEO bulk
154 M6PR transgenic leaf 0mM NaCl 0.46 >More info 0.61 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
155 toc1-1-49hr 0.42 >More info 0.65 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
156 penta Alternaria 3dpi 0.48 >More info 0.59 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
157 4h decapitation -0.38 >More info -0.69 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
158 Col-0 2HS 0.47 >More info 0.60 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
159 3x(p) 0.37 >More info 0.70 >More info 2x two week old seedlings Original data
160 embryo paclobutrazol 0.52 >More info 0.54 >More info embryo-control paclobutrazol embryo Original data GEO bulk
161 pif4pif5 mut 1h FR -0.59 >More info -0.47 >More info WT 1h FR Original data GEO bulk
162 Cocultivation 8 hrs root 0.51 >More info 0.55 >More info Mock cocultivation 8 hrs root Root Original data
163 Col ozone 3h 0.45 >More info 0.61 >More info Col clean-air 3h ozone Original data GEO bulk
164 +1.6 mM Tween 20 1 h. 0.47 >More info 0.59 >More info +distilled water 1 h. Original data GEO bulk
165 atmyc2 cop1 Seedling BL 0.43 >More info 0.63 >More info WT Seedling BL Original data GEO bulk
166 sfr3 cold 0.50 >More info 0.55 >More info WT cold All aerial tissue Original data GEO bulk
167 pap1-D/tt4 0.54 >More info 0.51 >More info Col-0 aerial part Original data
168 WT light -0.54 >More info -0.51 >More info WT dark Original data GEO bulk
169 Mature callus 0.44 >More info 0.61 >More info Young callus hypocotyls Original data GEO bulk
170 CAX1/CAX3 mutant 0.58 >More info 0.47 >More info Col whole plant Original data GEO bulk
171 shoot-10 μM DEX- 6 hr 0.48 >More info 0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
172 shoots bhlh100/101 0uM Fe 0.50 >More info 0.54 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
173 efr-1 +elf18 10h -0.53 >More info -0.51 >More info WT +elf18 10h elf18 Original data GEO bulk
174 Seedling-HeatStressed POLYSOMESmRNA 0.53 >More info 0.51 >More info Seedling-control POLYSOMESmRNA seedling Original data
175 Cor 10h 0.50 >More info 0.54 >More info Mock 10h Cor Original data GEO bulk
176 ataf1-1 mutant Col-0 Bgh inoculated 0.52 >More info 0.52 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
177 mkk1/mkk2 control rep 0.49 >More info 0.55 >More info Col-0 Time 0 rep Original data GEO bulk
178 Col whole leaf 3dpi 0.44 >More info 0.60 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
179 clf-28 swn-7 0.45 >More info 0.59 >More info Col whole plant Original data GEO bulk
180 Col-0 low oxygen 0.49 >More info 0.55 >More info Col-0 control low oxygen root Original data GEO bulk
181 nas4x leaves - Fe -0.40 >More info -0.64 >More info WT leaves - Fe Leaves Original data GEO bulk
182 msh1 albino 0.44 >More info 0.60 >More info WT aerial part Original data GEO bulk
183 E.coli 0157 H7 7h 0.46 >More info 0.58 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
184 gh3.5D uninoculated -0.48 >More info -0.56 >More info Col-0 48 hpi Original data GEO bulk
185 dde2-2 9 hpi A. brassicicola 0.47 >More info 0.57 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
186 Heat and anoxia 0.51 >More info 0.52 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
187 sicy-192 gun1-101 cotyledons 0.54 >More info 0.49 >More info WT cotyledons cotyledons Original data
188 ARR22-ox (t-zeatin 3 h) 0.55 >More info 0.48 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
189 24h +Pi -0.39 >More info -0.64 >More info 24h -Pi root Original data GEO bulk
190 phyABDE Rc50 -0.49 >More info -0.54 >More info phyABDE Dark red light whole seedling Original data GEO bulk
191 hai1-2 low water potential 0.46 >More info 0.57 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
192 WT+H2O2 0.49 >More info 0.54 >More info WT H2O2 Original data GEO bulk
193 root endodermis and quiescent center 40 mM NaCl 0.38 >More info 0.65 >More info root endodermis and quiescent center Original data GEO bulk
194 9 hr Hypoxia IP RNA 0.49 >More info 0.54 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
195 2 hr Hypoxia Total RNA 0.49 >More info 0.54 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
196 IRP1-OE-Fe--shoot 0.40 >More info 0.63 >More info COL-0-Fe--shoot shoot Original data
197 npr1 sni1 ssn2 -0.53 >More info -0.49 >More info npr1 sni1 water water seedling Original data GEO bulk
198 pepr1-1 Pepr2-3 +Pep2 10h -0.52 >More info -0.50 >More info WT +Pep2 10h Pep2 Original data GEO bulk
199 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.59 >More info 0.43 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
200 Col-Luc WT 3h antimycin A 0.52 >More info 0.50 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
201 sfr2 control -0.67 >More info -0.35 >More info WT control All aerial tissue Original data GEO bulk
202 eto1-4 0.51 >More info 0.51 >More info Col-0 whole seedling Original data GEO bulk
203 6h volatiles Sm. R3089 0.31 >More info 0.71 >More info 6h untreated whole seedling Original data GEO bulk
204 oligomycin 1 h 0.41 >More info 0.61 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
205 35S::MBF1c 0.45 >More info 0.57 >More info control Original data GEO bulk
206 arf2 mock 0.53 >More info 0.48 >More info Col mock Original data GEO bulk
207 Nicotinamide-61hr 0.57 >More info 0.44 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
208 Myzus persicae saliva 0.50 >More info 0.51 >More info Control Original data GEO bulk
209 A. thaliana-A. lyrata hybrid -0.54 >More info -0.47 >More info A. thaliana mature leaves before flowering Original data GEO bulk
210 Mutant arf2 (etiol) 0.53 >More info 0.48 >More info Col (etiol) Original data GEO bulk
211 aphid saliva treated 0.50 >More info 0.51 >More info control aphid saliva treated leaves Original data GEO bulk
212 ABA DFPM 0.50 >More info 0.51 >More info control Original data GEO bulk
213 K starvation (root) 0.41 >More info 0.60 >More info Ws (root) Original data GEO bulk
214 plant (tga2-5-6) 4h phytoprostane A1 0.44 >More info 0.57 >More info plant (tga2-5-6) 4h control Original data GEO bulk
215 pad4-PsmES4326-24hpi -0.47 >More info -0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
216 cpr5npr1 0.49 >More info 0.52 >More info WT(COL) Original data GEO bulk
217 Root -K 0.41 >More info 0.60 >More info Control-root Original data GEO bulk
218 S58-2 0.41 >More info 0.60 >More info wt Original data GEO bulk
219 pmr5 0.41 >More info 0.60 >More info Col-0 Original data GEO bulk
220 aerial organ callus inducing medium 24h 0.48 >More info 0.52 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
221 roots bhlh100/101 0uM Fe 0.49 >More info 0.51 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
222 cpr5 0.48 >More info 0.52 >More info WT(COL) Original data GEO bulk
223 embryo ABA 0.47 >More info 0.53 >More info embryo-control ABA embryo Original data GEO bulk
224 AFB1 0h 0.41 >More info 0.58 >More info Col 0h Leaf Original data GEO bulk
225 atgsnor1-1 -0.32 >More info -0.67 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
226 RPL18 TuMV inoculated polysomal RNA 0.48 >More info 0.51 >More info mock inoculated polysomal RNA PO Original data GEO bulk
227 Cor hrpS 10h 0.47 >More info 0.52 >More info Mock 10h Cor hrpS Original data GEO bulk
228 BLM+INA 0.47 >More info 0.52 >More info CK BLM and INA seedling Original data
229 sid2-2 9 hpi A. brassicicola 0.48 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
230 WT Red light 18h -0.52 >More info -0.46 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
231 scrm-D 0.50 >More info 0.48 >More info Col-0 WT whole seedling Original data GEO bulk
232 tfl1-1-23ºC 0.56 >More info 0.42 >More info WT-23ºC Original data GEO bulk
233 gai Control 0.51 >More info 0.47 >More info Laer Control leaf discs Original data GEO bulk
234 Heat 2 days recovery 0.52 >More info 0.46 >More info Mock 2 days recovery seedling Original data GEO bulk
235 35S:RPS4 eds1-2 8h -0.54 >More info -0.44 >More info 35S:RPS4 8h leaves Original data
236 Atss3 Light4 -0.46 >More info -0.52 >More info Atss3 Dark0.5 Original data GEO bulk
237 upf3 0.47 >More info 0.51 >More info WT whole plant Original data GEO bulk
238 Whole root - low pH 12H 0.40 >More info 0.58 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
239 WT H2O2 3h 0.44 >More info 0.54 >More info WT water 3h 3h_H2O2 Original data GEO bulk
240 root stele 40 mM NaCls 0.39 >More info 0.59 >More info root stele Original data GEO bulk
241 cop1 Seedling BL 0.44 >More info 0.54 >More info WT Seedling BL Original data GEO bulk
242 camta1/2/3 24h cold 0.50 >More info 0.47 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
243 Anoxia 0.47 >More info 0.50 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
244 HopZ1a treated 0.44 >More info 0.53 >More info col Original data GEO bulk
245 OsRLCK253 expressing -0.39 >More info -0.58 >More info WT seedlings Original data GEO bulk
246 P.p 6hai 0.52 >More info 0.44 >More info At-Control roots Original data GEO bulk
247 Chitosan 3h Treatment 0.51 >More info 0.45 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
248 Osmotic Stress 24 h (root) 0.54 >More info 0.42 >More info Stress mock 24 h (root) Original data Stress treatments
249 oas-a1.1 Cd 18h 0.34 >More info 0.62 >More info Cd 18h root Root Original data GEO bulk
250 vtc2 (I) 0.45 >More info 0.51 >More info Col (I) rosette Original data GEO bulk
251 hrcC 0.42 >More info 0.54 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
252 SOS1 0mM NaCl 0.44 >More info 0.52 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
253 mil4 sid2 0.43 >More info 0.53 >More info Col rosettes Original data GEO bulk
254 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.55 >More info 0.40 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
255 Mutant pif1-2 (Dark etiol) 0.40 >More info 0.55 >More info Col-0 (Dark etiol) Original data GEO bulk
256 pif1-2 dark 0.40 >More info 0.55 >More info Wt dark Original data GEO bulk
257 RRE2 Chitin 0.51 >More info 0.44 >More info Chitin Original data GEO bulk
258 coi1-2 0.50 >More info 0.45 >More info Col-0 mock Whole seedling Original data GEO bulk
259 Full C2 T2 0.51 >More info 0.44 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
260 phyB Rc50 0.52 >More info 0.43 >More info WT(Ler) Rc50 Original data GEO bulk
261 seedlings protease IV 0.51 >More info 0.44 >More info seedlings nontreated control whole seedling Original data
262 Te ozone 0.54 >More info 0.41 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
263 leaf blade in FRD 0.52 >More info 0.43 >More info leaf blade in WL leaf blades Original data GEO bulk
264 21h-DC3000 hrpA -0.36 >More info -0.59 >More info 21h-DC3000 leaves Original data GEO bulk
265 Col-O high light 0.43 >More info 0.52 >More info Col-O bule light Original data GEO bulk
266 FLIGHT TAGESB plate6 SHOOTS 0.43 >More info 0.52 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
267 Col-0 ozone 0.55 >More info 0.39 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
268 Col-0-avrB-6h 0.39 >More info 0.55 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
269 OsSAP11 expressing -0.40 >More info -0.54 >More info WT seedlings Original data GEO bulk
270 ACC 3 h 0.36 >More info 0.58 >More info Mock 3 h Original data Basic hormone treatment of seedlings
271 ice1 3H Cold 0.42 >More info 0.52 >More info WT 3H Cold Original data GEO bulk
272 pif4pif5 high R/FR 0.41 >More info 0.53 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
273 AsAKiin11 T2 0.35 >More info 0.59 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
274 CMV-A2b mutant 0.53 >More info 0.40 >More info Mock-At Aerial tissues Original data GEO bulk
275 WT polysome -0.39 >More info -0.54 >More info WT non-polysome Original data GEO bulk
276 nbp35-3/- 0.59 >More info 0.34 >More info WT whole seedling Original data GEO bulk
277 exo70A1 0.57 >More info 0.36 >More info Col-0 whole plant Original data GEO bulk
278 coi1-16 ein2 sid2 ctrl -0.52 >More info -0.41 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
279 Laer pretreat GA Flg22 1h 0.22 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
280 camta2/3 warm 0.41 >More info 0.52 >More info WT warm entire aerial part Original data GEO bulk
281 6h volatiles Sp. HRO-C48 0.40 >More info 0.52 >More info 6h untreated whole seedling Original data GEO bulk
282 aphid infested 0.36 >More info 0.56 >More info control aphid infested Leaves Original data GEO bulk
283 aphid infested 0.36 >More info 0.56 >More info CTR Original data GEO bulk
284 Dark 4 h pls RedLight 1min -0.50 >More info -0.42 >More info Dark 4 h Original data Light treatments
285 WT 24H Cold 0.42 >More info 0.50 >More info WT control Original data GEO bulk
286 camta1/3 warm 0.35 >More info 0.57 >More info WT warm entire aerial part Original data GEO bulk
287 hira-root -0.33 >More info -0.59 >More info WT-root root Original data
288 RRE1 Chitin 0.53 >More info 0.38 >More info Chitin Original data GEO bulk
289 ALC Toc1 light-dark EtOH -0.53 >More info -0.38 >More info Col light-dark EtOH 2.5% ethanol Original data GEO bulk
290 LTN008-2 aza-dc 0.51 >More info 0.40 >More info LTN012-2 Mock Original data
291 WT-SA 0.40 >More info 0.51 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
292 5-Triiodobenzoic acid3 h 0.34 >More info 0.57 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
293 AvrRpm1 2 h (leaf) 0.34 >More info 0.56 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
294 root columella root cap 40 mM NaCl 0.34 >More info 0.56 >More info root columella root cap Original data GEO bulk
295 CT101 ozone 0.53 >More info 0.37 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
296 Salt Stress 24 h (root) 0.50 >More info 0.40 >More info Stress mock 24 h (root) Original data Stress treatments
297 miR393 0h -0.25 >More info -0.65 >More info WT 0h Leaf tissue Original data GEO bulk
298 PBZ 0.38 >More info 0.52 >More info none PBZ Rosette Original data GEO bulk
299 WT cold 0.38 >More info 0.52 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
300 PNO8 3 h 0.32 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
301 PNO8 12 h 0.32 >More info 0.58 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
302 S15-118 0.31 >More info 0.59 >More info wt Original data GEO bulk
303 atmospheric CO2 low Mg shoot 0.51 >More info 0.38 >More info atmospheric CO2 normal Mg shoot Shoot Original data
304 Elevated CO2 expanding leaf 0.37 >More info 0.52 >More info Ambient CO2 expanding leaf expanding leaf Original data
305 CeO2 germinant -0.20 >More info -0.69 >More info Millipore Water germinant CeO2 seedling Original data
306 roottip hypoxia total 0.33 >More info 0.55 >More info roottip control total Original data GEO bulk
307 Col-0 low oxygen 0.38 >More info 0.50 >More info Col-0 Original data GEO bulk
308 root hypoxia total 0.37 >More info 0.51 >More info root control total Original data GEO bulk
309 toc1-1-73hr 0.28 >More info 0.60 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
310 rosette leaves lcr 0.34 >More info 0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
311 plant (Col-0) 4h phytoprostane A1 0.36 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
312 gai Flg22 1h 0.37 >More info 0.50 >More info Laer Flg22 1h leaf discs Original data GEO bulk
313 tt4 UV 0.23 >More info 0.64 >More info UV aerial region Original data GEO bulk
314 gpa1-4/agb1-2 ozone 2d -0.22 >More info -0.65 >More info Col ozone 2d ozone Original data GEO bulk
315 GO5; 8h switch to ambient CO2 concentrations; 0.29 >More info 0.58 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
316 SCR-GR Time 3H Dex 0.33 >More info 0.53 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
317 Ws leaf 100mM NaCl 0.30 >More info 0.56 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
318 Col(gl) leaf 0mM NaCl 0.32 >More info 0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
319 Ws 100mM NaCl 0.30 >More info 0.56 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
320 Col(gl) 0mM NaCl 0.32 >More info 0.54 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
321 root epidermis and lateral root cap -S -0.34 >More info -0.52 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
322 Leafminer systemically damaged thaliana seedlings 0.50 >More info 0.36 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
323 root - 01% oxygen - 2h 0.36 >More info 0.50 >More info root - 21% oxygen - 2h Original data GEO bulk
324 myb3 myb3r4d 0.28 >More info 0.57 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
325 DC3000 24h 0.35 >More info 0.50 >More info Mock 24h DC3000 Original data GEO bulk
326 wrky33 Bc inoculation 14h 0.50 >More info 0.34 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
327 C24 ozone 0.51 >More info 0.33 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
328 coi1-16 ein2 sid2 ozone 0.54 >More info 0.30 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
329 dor drought 0.34 >More info 0.50 >More info WT drought Original data GEO bulk
330 AtMinD1 Prolonged-induction 0.34 >More info 0.50 >More info Control whole plant Original data GEO bulk
331 shoot-10 μM DEX- 12 hr 0.33 >More info 0.51 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
332 gun1-9 control -0.25 >More info -0.59 >More info Col-0 control Original data GEO bulk
333 Shoot -Cs 0.25 >More info 0.59 >More info Control-shoot Original data GEO bulk
334 P.p 10.5hai 0.50 >More info 0.33 >More info At-Control roots Original data GEO bulk
335 cat2-2; 8h switch to ambient CO2 concentrations; 0.29 >More info 0.54 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
336 CLO 4mM 0.60 >More info 0.23 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
337 pip3 At2g19270 TDNA 9 0.26 >More info 0.57 >More info Col-0 whole plant Original data GEO bulk
338 Apex mir-3TCP 14DAS -0.32 >More info -0.50 >More info Apex Col 14DAS Original data GEO bulk
339 eds16 whole leaf 6hpi -0.28 >More info -0.54 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
340 siliques AtHb1 control 0.30 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
341 bri1-116 0.09 >More info 0.73 >More info Col seedling Original data GEO bulk
342 bio4-1 mutant leaves 0.24 >More info 0.58 >More info WT leaves leaves Original data GEO bulk
343 Heat shock optimum 0.16 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
344 ABA SA 24h 0.21 >More info 0.59 >More info EtOH 24h 24hr Original data GEO bulk
345 0h light (+Lincomycin) -0.50 >More info -0.29 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
346 light -0.60 >More info -0.18 >More info dark light seedling Original data GEO bulk
347 21h-DC3000 avrRpm1 -0.26 >More info -0.52 >More info 21h-DC3000 leaves Original data GEO bulk
348 R. solani AG8 0.26 >More info 0.51 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
349 seedling 3h after HZE WT 0.74 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
350 Octopus overexpressor 35SDYG25 0.52 >More info 0.24 >More info WS Original data GEO bulk
351 tunicamycin -0.26 >More info -0.50 >More info DMF Original data GEO bulk
352 etiolated atbzip16 0.53 >More info 0.22 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
353 Shoot submergence 7h 0.74 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
354 opr3 OPDA 2 h 0.16 >More info 0.58 >More info opr3 0 h Original data GEO bulk
355 cat2-short-day 4d 0.19 >More info 0.54 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
356 gun1-1 +lincomycin -0.22 >More info -0.51 >More info Col-0 +lincomycin Original data GEO bulk
357 Dark 2day ivd 0.72 >More info -0.01 >More info 0h ivd Original data
358 cell culture 4 h phytoprostane A1 0.19 >More info 0.52 >More info cell culture 4 h control Original data GEO bulk
359 gpa1 -ABA GC -0.12 >More info -0.59 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
360 IAA7mII over-expressor IAA Treated 0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
361 root - 04% oxygen - 2h 0.17 >More info 0.52 >More info root - 21% oxygen - 2h Original data GEO bulk
362 ddm1-2 -0.51 >More info -0.18 >More info Col-0 plant inflorescence Original data
363 Ibuprofen 3 h 0.07 >More info 0.62 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
364 triploid female excess -0.13 >More info -0.55 >More info tetraploid Original data GEO bulk
365 Hydrogen Peroxide 500 uM 0.14 >More info 0.53 >More info Control RB and PER Hydrogen Peroxide Original data
366 Prohexadione 3 h 0.15 >More info 0.51 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
367 4d red light grown hmr-22 seedlings 0.82 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
368 sfr3 control 0.03 >More info 0.58 >More info WT control All aerial tissue Original data GEO bulk
369 SA Treated 0.51 >More info 0.08 >More info Water Original data GEO bulk
370 SHR-GR Time 6H Dex -0.03 >More info -0.53 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
371 phosphate-starved 0.01 >More info 0.55 >More info control shoot tissue Original data GEO bulk
372 Col-0 24hpi A. brassicicola 0.53 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
373 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
374 HairpinZ 4 h (leaf) 0.54 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
375 Light 3day hml -0.25 >More info 0.76 >More info 0h hml Original data
376 seed germinating in countinuous light 24h SL -0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
377 glk1 glk2 GLK1-GR +DEX 4h 0.50 >More info -0.02 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
378 Fei-0-30min IAA 0.03 >More info -0.51 >More info Fei-0-0h IAA whole plant Original data GEO bulk
379 IAA/inhibitor B Treated -0.05 >More info 0.51 >More info IAA Treated Original data GEO bulk
380 Col PSTDC3000 24h 0.53 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
381 Shoot apex inflorescence (after bolting) -0.29 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages