4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col in Pi deficiency medium
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List of experiments correlated with "Col in Pi deficiency medium"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col in Pi deficiency medium		 Correlation to
Col in Pi deficiency medium		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col in Pi deficiency medium 1.00 >More info 1.00 >More info Col in control medium root Original data GEO bulk
2 SCL3 OE -0.79 >More info -0.54 >More info Col-0 whole root Original data GEO bulk
3 oas-a1.1 Cd 18h 0.63 >More info 0.65 >More info Cd 18h root Root Original data GEO bulk
4 NaCl Col 0.67 >More info 0.61 >More info Col Original data GEO bulk
5 6h +Pi -0.61 >More info -0.67 >More info 6h -Pi root Original data GEO bulk
6 per1 in control medium 0.75 >More info 0.51 >More info Col in control medium root Original data GEO bulk
7 TA induced 0.73 >More info 0.51 >More info Methanol TA Suspension cells Original data GEO bulk
8 Mutant iaa17-6 (IAA) 0.65 >More info 0.56 >More info Col (IAA) Original data GEO bulk
9 whole roots 140 mM NaCl 30 minutes 0.60 >More info 0.60 >More info whole roots standard Original data GEO bulk
10 hira-root -0.70 >More info -0.49 >More info WT-root root Original data
11 WT 1wk -P 0.70 >More info 0.47 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
12 R. solani AG8 0.73 >More info 0.43 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
13 8hr-pH4.5 0.58 >More info 0.57 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
14 Leafminer damaged seedlings 0.59 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
15 Col0-PsmES4326-24hpi 0.54 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
16 24h +Pi -0.60 >More info -0.54 >More info 24h -Pi root Original data GEO bulk
17 TNT-seedlings 0.60 >More info 0.54 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
18 Whole root - low pH 3H 0.59 >More info 0.54 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
19 1h +Pi -0.56 >More info -0.57 >More info 1h -Pi root Original data GEO bulk
20 root Dosed gold 0.61 >More info 0.51 >More info root No gold .125 mM gold 24 h roots Original data
21 0.125 mM gold 24 h 0.61 >More info 0.51 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
22 35S:RPS4 eds1-2 2h -0.57 >More info -0.53 >More info 35S:RPS4 2h leaves Original data
23 WT Shoot-Pi 0.65 >More info 0.45 >More info WT Shoot+Pi shoots Original data GEO bulk
24 seedlings-week-old RECA1-overexpressing
transgenic		 0.68 >More info 0.41 >More info seedlings-week-old Col-0 seedlings Original data
25 WT AntimycinA 3h 0.70 >More info 0.38 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
26 Salt Stress 24 h (root) 0.67 >More info 0.40 >More info Stress mock 24 h (root) Original data Stress treatments
27 Col-0 2HS 0.50 >More info 0.57 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
28 whole roots 140 mM NaCl 1 hour 0.57 >More info 0.50 >More info whole roots standard Original data GEO bulk
29 anac017-1 H2O2 3h -0.82 >More info -0.25 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
30 stn7-1 -0.65 >More info -0.41 >More info Col-0 rosette leaves Original data GEO bulk
31 ein2-1 9 hpi A. brassicicola 0.61 >More info 0.45 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
32 (Ws-2)+100 uM As 0.58 >More info 0.48 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
33 CMV-WT 0.72 >More info 0.32 >More info Mock-At Aerial tissues Original data GEO bulk
34 Selenate (root) 0.63 >More info 0.41 >More info Ws (root) Original data GEO bulk
35 Root Selenate 0.63 >More info 0.41 >More info Root control 40 micromolar selenate Root Original data GEO bulk
36 9 hr Hypoxia 1 hr recovery Total RNA 0.68 >More info 0.36 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
37 AgNO3 3 h 0.70 >More info 0.34 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
38 C24-3h IAA 0.71 >More info 0.33 >More info C24-0h IAA whole plant Original data GEO bulk
39 9 hr Hypoxia 1 hr recovery IP RNA 0.70 >More info 0.34 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
40 myb3 myb3r4d 0.54 >More info 0.50 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
41 Col ozone 3h 0.47 >More info 0.57 >More info Col clean-air 3h ozone Original data GEO bulk
42 flu 0.58 >More info 0.45 >More info WT Col Original data GEO bulk
43 rsa3-1 Na 24h 0.60 >More info 0.43 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
44 pho1 0.67 >More info 0.36 >More info Col2WT Original data GEO bulk
45 Bur-0-1h IAA 0.73 >More info 0.30 >More info Bur-0h IAA whole plant Original data GEO bulk
46 Osmotic Stress 24 h (shoot) 0.69 >More info 0.33 >More info Stress mock 24 h (shoot) Original data Stress treatments
47 Seedling KUA1-IOX est 0.51 >More info 0.51 >More info Seedling KUA1-IOX mock Original data
48 flu over-tAPX 0.54 >More info 0.48 >More info WT Col Original data GEO bulk
49 QC pSCR(QC pSCRBRI1) 8h BL -0.43 >More info -0.59 >More info QC pSCR(QC pSCRBRI1) 0h BL brassinosteroid root Original data
50 cca1-lhy before light -0.73 >More info -0.28 >More info before light whole seedlings Original data GEO bulk
51 root BA 12h 0.46 >More info 0.55 >More info root control 12h boron (5mM) root Original data GEO bulk
52 3x(m) 0.28 >More info 0.73 >More info 2x two week old seedlings Original data
53 ein5-1 ski2-3 0.72 >More info 0.28 >More info Col-0 aerial tissue Original data
54 anac017-2 AntimycinA 3h -0.70 >More info -0.30 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
55 Osmotic Stress 24 h (root) 0.57 >More info 0.43 >More info Stress mock 24 h (root) Original data Stress treatments
56 inhibitor B Treated 0.48 >More info 0.52 >More info Negative Control Original data GEO bulk
57 9 hr Hypoxia IP RNA 0.59 >More info 0.40 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
58 Roots Cd -0.71 >More info -0.28 >More info Roots control Cd Root Original data GEO bulk
59 WT Root-Pi 0.60 >More info 0.39 >More info WT Root+Pi roots Original data GEO bulk
60 Col-0-3h IAA 0.68 >More info 0.31 >More info Col-0-0h IAA whole plant Original data GEO bulk
61 bHLH122 ox -0.52 >More info -0.47 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
62 WT Shoot Hypoxia 0.50 >More info 0.49 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
63 shoot hypoxia total 0.44 >More info 0.55 >More info shoot control total Original data GEO bulk
64 Heat shock optimum 0.34 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
65 Col-0 9 hpi A. brassicicola 0.63 >More info 0.35 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
66 9m.KCl 0.63 >More info 0.35 >More info To. KCl 14 day old Roots Original data GEO bulk
67 5-Triiodobenzoic acid3 h 0.68 >More info 0.30 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
68 nia1nia2 0.70 >More info 0.28 >More info Col-0 whole seedlings Original data GEO bulk
69 Col-Luc WT 3h antimycin A 0.65 >More info 0.33 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
70 sfr6 drought -0.43 >More info -0.55 >More info WT drought All aerial tissue Original data GEO bulk
71 Kas -Fe 24h Roots -0.50 >More info -0.47 >More info Kas +Fe 24h Roots Original data GEO bulk
72 albino Ds13-2198-1 -0.64 >More info -0.33 >More info control Original data GEO bulk
73 Kas-1 -Fe 24h -0.50 >More info -0.47 >More info Kas-1 +Fe 24h roots Original data GEO bulk
74 9 hr Hypoxia Total RNA 0.59 >More info 0.38 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
75 roots IAA 0.54 >More info 0.43 >More info roots mock Original data GEO bulk
76 Laer pretreat GA Flg22 1h 0.26 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
77 rosette leaves lcr 0.68 >More info 0.28 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
78 root - 04% oxygen - 2h 0.17 >More info 0.79 >More info root - 21% oxygen - 2h Original data GEO bulk
79 Light 0.55 >More info 0.41 >More info Control Original data GEO bulk
80 rosette leaves fdh 0.59 >More info 0.37 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
81 CMP 4hr 0.57 >More info 0.39 >More info Acetone 4hr root Original data GEO bulk
82 Cycloheximide 3 h 0.64 >More info 0.32 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
83 Cor hrpS 10h 0.55 >More info 0.41 >More info Mock 10h Cor hrpS Original data GEO bulk
84 sid2-2 9 hpi A. brassicicola 0.58 >More info 0.38 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
85 edr1 18 h powdery mildew 0.70 >More info 0.26 >More info Col-0 18 h powdery mildew Original data GEO bulk
86 Elevated CO2 AMPLE N NIGHT 0.62 >More info 0.33 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
87 coi1-2 0.61 >More info 0.34 >More info Col-0 mock Whole seedling Original data GEO bulk
88 root stele 40 mM NaCls 0.59 >More info 0.36 >More info root stele Original data GEO bulk
89 pepr1-1 Pepr2-3 +Pep2 2h -0.57 >More info -0.38 >More info WT +Pep2 2h Pep2 Original data GEO bulk
90 siliques AtHb1 control 0.43 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
91 intact root auxin 0.61 >More info 0.33 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
92 Fenclorim 24hr 0.50 >More info 0.44 >More info Acetone 24hr root Original data GEO bulk
93 pmr5 pmr6 0.58 >More info 0.36 >More info Col-0 Original data GEO bulk
94 ABA 3 h 0.51 >More info 0.43 >More info Mock 3 h Original data Basic hormone treatment of seedlings
95 Wounding Stress3 h (shoot) 0.70 >More info 0.24 >More info Stress mock 3 h (shoot) Original data Stress treatments
96 WT+chitooctaose 0.53 >More info 0.41 >More info WT+water chitooctaose seedlings Original data GEO bulk
97 1hr-pH4.5 0.44 >More info 0.50 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
98 Whole root - S 3H 0.56 >More info 0.37 >More info Whole root - S 0H Original data GEO bulk
99 M6PR transgenic leaf 100mM NaCl -0.52 >More info -0.41 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
100 Bur-0-3h IAA 0.70 >More info 0.23 >More info Bur-0h IAA whole plant Original data GEO bulk
101 WT +Pep2 2h 0.58 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
102 cop1 Seedling BL 0.58 >More info 0.35 >More info WT Seedling BL Original data GEO bulk
103 ABA DFPM 0.52 >More info 0.41 >More info control Original data GEO bulk
104 IXB induced 0.52 >More info 0.40 >More info Methanol IXB Suspension cells Original data GEO bulk
105 sav1-1 light 0.53 >More info 0.39 >More info Col-0 light seedlings Original data GEO bulk
106 phr1 Root-Pi 0.54 >More info 0.38 >More info WT Root+Pi roots Original data GEO bulk
107 root cells endodermis and quiescent center -Fe 0.54 >More info 0.38 >More info whole roots standard Original data GEO bulk
108 WT no Pi 0.66 >More info 0.26 >More info WT complete seedlings Original data
109 WT in -N 0.60 >More info 0.32 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
110 Fenclorim 4hr 0.50 >More info 0.42 >More info Acetone 4hr root Original data GEO bulk
111 OXUPB1-2 elongation zone 0.57 >More info 0.35 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
112 WT+H2O2 0.54 >More info 0.37 >More info WT H2O2 Original data GEO bulk
113 tor mutant glucose 0.56 >More info 0.35 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
114 R. solani AG2-1 0.58 >More info 0.33 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
115 Bur-0-30min IAA 0.69 >More info 0.22 >More info Bur-0h IAA whole plant Original data GEO bulk
116 2 hr Hypoxia Total RNA 0.51 >More info 0.39 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
117 anac017-2 H2O2 3h -0.74 >More info -0.16 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
118 HopZ1a treated 0.65 >More info 0.25 >More info col Original data GEO bulk
119 Col BTH 0.23 >More info 0.67 >More info Col rosettes Original data GEO bulk
120 rsa1 salt 0 h 0.57 >More info 0.33 >More info WT salt 0 h Control seedlings Original data GEO bulk
121 safener treated 0.61 >More info 0.29 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
122 mbd6 mutant thaliana 10-day-old seedling 0.64 >More info 0.25 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
123 pepr1-1 Pepr2-3 +Pep2 10h -0.53 >More info -0.36 >More info WT +Pep2 10h Pep2 Original data GEO bulk
124 hsfa2 KO -0.51 >More info -0.38 >More info WT (Col-0) whole seedling Original data GEO bulk
125 Te ozone 0.61 >More info 0.28 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
126 DFPM 0.51 >More info 0.38 >More info control Original data GEO bulk
127 IMI 4mM 0.64 >More info 0.25 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
128 Root -Cs 0.38 >More info 0.51 >More info Control-root Original data GEO bulk
129 ckh1 CK0 0.57 >More info 0.32 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
130 Mutant axr3-1 (IAA) 0.71 >More info 0.18 >More info Col (IAA) Original data GEO bulk
131 Col-0 under 4 days salt 0.60 >More info 0.29 >More info Col-0 under control 4 days salt treatment rosette Original data
132 Col-0-1h IAA 0.59 >More info 0.30 >More info Col-0-0h IAA whole plant Original data GEO bulk
133 35S:RPS4 eds1-2 8h -0.59 >More info -0.30 >More info 35S:RPS4 8h leaves Original data
134 inhibitor A Treated 0.55 >More info 0.33 >More info Negative Control Original data GEO bulk
135 2 hr Hypoxia IP RNA 0.53 >More info 0.35 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
136 ataf1-1 mutant Col-0 Bgh inoculated 0.63 >More info 0.25 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
137 vte2 leaves 48h LT 0.62 >More info 0.26 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
138 WT H2O2 3h 0.55 >More info 0.32 >More info WT water 3h 3h_H2O2 Original data GEO bulk
139 BI-1-3h IAA 0.60 >More info 0.27 >More info BI-1-0h IAA whole plant Original data GEO bulk
140 Fei-0-3h IAA 0.60 >More info 0.27 >More info Fei-0-0h IAA whole plant Original data GEO bulk
141 ARR22-ox (t-zeatin 3 h) 0.65 >More info 0.22 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
142 IAA 0.5 h 0.36 >More info 0.51 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
143 ceh1 mutant 0.67 >More info 0.19 >More info Parent line Original data
144 C24-1h IAA 0.60 >More info 0.26 >More info C24-0h IAA whole plant Original data GEO bulk
145 Sulfometuron EC50 0.51 >More info 0.35 >More info Carrier Original data GEO bulk
146 dde2-2 9 hpi A. brassicicola 0.57 >More info 0.29 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
147 WT chitooctaose 0.57 >More info 0.29 >More info WT water Original data GEO bulk
148 Shoot -K 0.57 >More info 0.29 >More info Control-shoot Original data GEO bulk
149 K starvation (shoot) 0.57 >More info 0.29 >More info Ws (shoot) Original data GEO bulk
150 oligomycin 4 h 0.53 >More info 0.32 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
151 WT Col-0 Bgh inoculated 0.55 >More info 0.30 >More info WT Col-0 Un-inoculated Original data GEO bulk
152 seedling 24h after HZE WT 0.69 >More info 0.16 >More info seedling day 2 unirradiated WT 24h Original data
153 current injection 0.58 >More info 0.27 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
154 upf1 0.54 >More info 0.30 >More info WT whole plant Original data GEO bulk
155 Col-0 low oxygen 0.51 >More info 0.33 >More info Col-0 control low oxygen root Original data GEO bulk
156 BLM+INA 0.53 >More info 0.31 >More info CK BLM and INA seedling Original data
157 WT 1mM phosphate 8 hours. -0.50 >More info -0.34 >More info WT control (not supplemented). Original data
158 S58-2 0.60 >More info 0.24 >More info wt Original data GEO bulk
159 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.62 >More info 0.22 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
160 Cold Stress 24 h (root) 0.62 >More info 0.22 >More info Stress mock 24 h (root) Original data Stress treatments
161 Cor 10h 0.57 >More info 0.27 >More info Mock 10h Cor Original data GEO bulk
162 Whole root - low pH 24H 0.54 >More info 0.29 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
163 cpr5npr1 0.65 >More info 0.18 >More info WT(COL) Original data GEO bulk
164 Fei-0-1h IAA 0.56 >More info 0.27 >More info Fei-0-0h IAA whole plant Original data GEO bulk
165 FLIGHT TAGESB plate6 ROOTS 0.50 >More info 0.33 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
166 P.p 30hai 0.53 >More info 0.30 >More info At-Control roots Original data GEO bulk
167 Protoplast Induced 0.51 >More info 0.32 >More info Uninduced Original data GEO bulk
168 Root wt CLE10 0.15 >More info 0.68 >More info Root wt CLE25 root tip Original data GEO bulk
169 CT101 ozone 0.59 >More info 0.24 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
170 cpr5scv1 0.59 >More info 0.24 >More info WT(COL) Original data GEO bulk
171 root protoplasts 40 mM NaCl 0.62 >More info 0.21 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
172 cpr5 0.62 >More info 0.21 >More info WT seedling Original data GEO bulk
173 rosette Dark Wounded 0.66 >More info 0.16 >More info rosette Dark Control Original data GEO bulk
174 Pst-DC3000(avrRpm1)-4hpi 0.52 >More info 0.30 >More info Pst-DC3000-4hpi Original data GEO bulk
175 gh3.5-1D 48 hpi 0.63 >More info 0.19 >More info Col-0 uninoculated Original data GEO bulk
176 WT 3h -P 0.62 >More info 0.20 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
177 Mutant gh3.5-1D (AvrRpt2) 0.56 >More info 0.26 >More info Col-0 (AvrRpt2) Original data GEO bulk
178 cpr5npr1svi1 0.54 >More info 0.28 >More info WT(COL) Original data GEO bulk
179 WT resupplied Pi 4h 0.66 >More info 0.16 >More info WT complete seedlings Original data
180 S15-118 0.52 >More info 0.30 >More info wt Original data GEO bulk
181 coi1-16 ein2 sid2 ctrl -0.64 >More info -0.18 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
182 8h-DC3000 avrRpm1 0.51 >More info 0.31 >More info 8h-DC3000 leaves Original data GEO bulk
183 dorn1-1 Root 100 mM ATP 30 min -0.27 >More info -0.55 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
184 HopZ1a treated ulp1c ulp1d 0.60 >More info 0.22 >More info col Original data GEO bulk
185 rao2 H2O2 3h -0.58 >More info -0.24 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
186 IAA7mII over-expressor IAA Treated 0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
187 WT seedlings MV 0.53 >More info 0.28 >More info WT seedlings control Seedlings Original data GEO bulk
188 total mRNA eif3k 0.61 >More info 0.20 >More info total mRNA WT aerial part Original data GEO bulk
189 9m.KNO3 0.56 >More info 0.25 >More info To. KNO3 14 day old Roots Original data GEO bulk
190 Col-0 flu HL 3h 0.53 >More info 0.28 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
191 HARAP hypoxic 0.51 >More info 0.30 >More info hypoxic hypoxia Original data GEO bulk
192 npr1 sni1 SA 0.55 >More info 0.26 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
193 per1 in Pi deficiency medium -0.56 >More info -0.25 >More info Col in Pi deficiency medium root Original data GEO bulk
194 P35S:rGRF3 0.66 >More info 0.15 >More info WS Original data GEO bulk
195 dcl1-7 0.67 >More info 0.14 >More info Ler Original data GEO bulk
196 Col-0-avrB-6h 0.61 >More info 0.20 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
197 npr1-3 MOCK 48h -0.59 >More info -0.22 >More info Col-0 MOCK 48h Original data GEO bulk
198 Nicotinamide-53hr 0.53 >More info 0.27 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
199 npr1-3 DCA 48h 0.52 >More info 0.28 >More info npr1-3 MOCK 48h Original data GEO bulk
200 LTN008-2 aza-dc 0.61 >More info 0.19 >More info LTN012-2 Mock Original data
201 gun1gun5 far-red pretreated -0.53 >More info -0.27 >More info WT far-red pretreated Original data GEO bulk
202 Leafminer locally damaged thaliana seedlings 0.59 >More info 0.20 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
203 oas-a1.1 Cd 24h 0.54 >More info 0.25 >More info Cd 24h root Shoot Original data GEO bulk
204 smg7b-1 0.61 >More info 0.18 >More info WT whole plant Original data GEO bulk
205 cpr5 0.53 >More info 0.26 >More info WT(COL) Original data GEO bulk
206 root cells -Fe 0.53 >More info 0.26 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
207 coi1-16 ein2 sid2 ozone 0.62 >More info 0.17 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
208 sfr3 warm -0.16 >More info -0.63 >More info WT-warm aerial tissues Original data GEO bulk
209 pXVE:HA-EDM2-a untreated -0.58 >More info -0.21 >More info Col-0 untreated seedlings Original data GEO bulk
210 ice1 control 0.73 >More info 0.05 >More info WT control Original data GEO bulk
211 bbx24 in Simulated Shade -0.56 >More info -0.22 >More info WT in simulated shade shade seedling Original data
212 root cells endodermis 140mM NaCl 20 hours 0.50 >More info 0.28 >More info root cells endodermis standard 1 hour root cells endodermis Original data
213 IAA 0.5h 0.51 >More info 0.27 >More info control 0.5h root Original data GEO bulk
214 AFB1 flg22 2h 0.59 >More info 0.19 >More info WT 0h Leaf tissue Original data GEO bulk
215 rosette Light Wounded 0.58 >More info 0.20 >More info rosette Light Control Original data GEO bulk
216 Col-0 ozone 0.58 >More info 0.20 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
217 (Col-0)+200 uM As 0.51 >More info 0.27 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
218 edr1 36 h powdery mildew 0.54 >More info 0.24 >More info Col-0 36 h powdery mildew Original data GEO bulk
219 FHY3p dark+DEX -0.54 >More info -0.24 >More info FHY3p dark+mock Original data GEO bulk
220 SCR-GR Time 1H Dex 0.28 >More info 0.50 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
221 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.58 >More info 0.19 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
222 GST NPP1 4 h (leaf) 0.56 >More info 0.21 >More info Mock 4 h (leaf) Original data Elicitor treatments
223 Pto inoculated 0.52 >More info 0.25 >More info col Original data GEO bulk
224 Mutant siz1-3 (Drought) 0.56 >More info 0.21 >More info Col-0 (Drought) Original data GEO bulk
225 Mature callus 0.54 >More info 0.23 >More info Young callus hypocotyls Original data GEO bulk
226 pnp1-1 1wk +P 0.58 >More info 0.19 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
227 vtc1 (II) 0.58 >More info 0.19 >More info Col (II) rosette Original data GEO bulk
228 siz1-3 drought 0.56 >More info 0.21 >More info Col-0 drought Original data GEO bulk
229 WT flg22 2h 0.60 >More info 0.17 >More info WT 0h Leaf tissue Original data GEO bulk
230 nia1nia2noa1-2 0.52 >More info 0.25 >More info Col-0 whole seedlings Original data GEO bulk
231 WT zebularine 5d -0.59 >More info -0.17 >More info WT mock 5d shoot apical meristem Original data
232 msh1 albino 0.57 >More info 0.19 >More info WT aerial part Original data GEO bulk
233 35S:RPS4 eds1-2 24h -0.50 >More info -0.26 >More info 35S:RPS4 24h leaves Original data
234 CAX1/CAX3 mutant 0.61 >More info 0.15 >More info Col whole plant Original data GEO bulk
235 Aerobic e1 ate2 0.25 >More info 0.51 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
236 WT 2-4h Xanthomonas 0.65 >More info 0.10 >More info WT T0 Original data GEO bulk
237 M6PR transgenic 0mM NaCl 0.57 >More info 0.18 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
238 seedlings protease IV 0.56 >More info 0.19 >More info seedlings nontreated control whole seedling Original data
239 tor mutant 0.55 >More info 0.20 >More info WT (Col) none seedlings Original data GEO bulk
240 cdm1 mutant floral young floral buds 0.50 >More info 0.25 >More info WT floral yound floral buds Unopen flower buds Original data
241 abi4-102 (II) 0.57 >More info 0.18 >More info Col (II) rosette Original data GEO bulk
242 Botrytis cinerea 48h 0.50 >More info 0.25 >More info control 48h Original data GEO bulk
243 col-5 DC3000 12h 0.52 >More info 0.23 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
244 Laer Flg22 1h 0.51 >More info 0.23 >More info Laer Control leaf discs Original data GEO bulk
245 mbd4 mutant thaliana 10-day-old seedling 0.53 >More info 0.21 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
246 Nicotinamide-81hr 0.58 >More info 0.16 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
247 Mutant arf2-6 -0.63 >More info -0.11 >More info Col Original data GEO bulk
248 amiR-ETP1/2 0.55 >More info 0.19 >More info Col-0 air Original data GEO bulk
249 mutant acs4A (single mutant) -0.52 >More info -0.22 >More info col control (single mutant) Original data GEO bulk
250 WT-NOCO2 INFECTED 0.56 >More info 0.18 >More info WT-MOCK Original data GEO bulk
251 35:SUB1A 0.56 >More info 0.18 >More info WT whole seedling Original data GEO bulk
252 root cells columella root cap -Fe 0.51 >More info 0.23 >More info whole roots standard Original data GEO bulk
253 upf3 0.54 >More info 0.20 >More info WT whole plant Original data GEO bulk
254 gun5 control 0.61 >More info 0.13 >More info Col-0 control Original data GEO bulk
255 wnk8-1 untreated -0.50 >More info -0.24 >More info Col-0 untreated seedlings Original data GEO bulk
256 Lipopolysaccaride4 h (leaf) 0.64 >More info 0.10 >More info Mock 4 h (leaf) Original data Elicitor treatments
257 bri1-116 0.01 >More info 0.73 >More info Col seedling Original data GEO bulk
258 wnk8-3 untreated -0.56 >More info -0.17 >More info Col-0 untreated seedlings Original data GEO bulk
259 Laer pretreat GA+JA Flg22 0h 0.54 >More info 0.19 >More info Laer pretreat water control leaf discs Original data GEO bulk
260 Primisulfuron EC50 0.53 >More info 0.20 >More info Carrier (primisulfuron) Original data GEO bulk
261 Transgenic LEC2GR Seedling 1h Dex 0.51 >More info 0.22 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
262 AvrRpt2 Col-0 6hpi 0.61 >More info 0.12 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
263 downy mildew cotyledons late stage 0.53 >More info 0.20 >More info mock inoculated Cotyledons Original data GEO bulk
264 Laer Flg22+GA 1h 0.55 >More info 0.18 >More info Laer Control leaf discs Original data GEO bulk
265 Triazolopyrimidine EC50 0.51 >More info 0.22 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
266 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.57 >More info -0.16 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
267 Col-O low light -0.56 >More info -0.16 >More info Col-O bule light Original data GEO bulk
268 C24 ozone 0.54 >More info 0.18 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
269 Glyphosate EC50 0.52 >More info 0.20 >More info Carrier (Glyphosate) Original data GEO bulk
270 pvip1 pvip2 0.57 >More info 0.15 >More info Col-0 whole rosettes Original data GEO bulk
271 Nicotinamide-57hr 0.62 >More info 0.10 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
272 Col leaf 100mM NaCl 0.54 >More info 0.17 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
273 Col leaf 100mM NaCl 0.54 >More info 0.17 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
274 Col 100mM NaCl 0.54 >More info 0.17 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
275 ABA 0.5 h 0.56 >More info 0.15 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
276 Cor 24h 0.50 >More info 0.21 >More info Mock 24h Cor Original data GEO bulk
277 arr-dmso-sample 0.55 >More info 0.15 >More info Wt-dmso-sample seedling Original data
278 cdkf:1-2 0.53 >More info 0.17 >More info wt seedling young seedlings Original data GEO bulk
279 WT 30μM arsenate 8 hours. 0.55 >More info 0.15 >More info WT control (not supplemented). Original data
280 ice1 3H Cold 0.57 >More info 0.13 >More info WT 3H Cold Original data GEO bulk
281 WT flg22 1h 0.51 >More info 0.19 >More info WT 0h Leaf tissue Original data GEO bulk
282 NAA 3h 0.53 >More info 0.16 >More info before treatment NAA root Original data GEO bulk
283 WT +Pep2 10h 0.52 >More info 0.17 >More info WT untreated Pep2 Original data GEO bulk
284 Laer pretreat JA Flg22 1h 0.50 >More info 0.19 >More info Laer pretreat water control leaf discs Original data GEO bulk
285 SOS1 0mM NaCl 0.51 >More info 0.18 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
286 CMV-A2b mutant 0.58 >More info 0.11 >More info Mock-At Aerial tissues Original data GEO bulk
287 Oxidative Stress 3 h (root) -0.59 >More info -0.09 >More info Stress mock 3 h (root) Original data Stress treatments
288 psae1-3 stn7-1 0.59 >More info 0.09 >More info WS rosette leaves Original data GEO bulk
289 WT +elf18 10h 0.58 >More info 0.10 >More info WT untreated elf18 Original data GEO bulk
290 toc1-1-65hr 0.50 >More info 0.17 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
291 cop1 Seedling BL+ABA 0.53 >More info 0.14 >More info WT Seedling BL+ABA Original data GEO bulk
292 vte2 leaves 120h LT 0.63 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
293 cs26 long day 0.51 >More info 0.16 >More info Leaves-WT-LD leaf Original data GEO bulk
294 csn5 (csn5a-2 csn5b) light 0.50 >More info 0.17 >More info WT light Original data GEO bulk
295 siliques WT hypoxia 0.65 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
296 miR393 flg22 2h 0.53 >More info 0.13 >More info WT 0h Leaf tissue Original data GEO bulk
297 vtc2-1 -0.53 >More info -0.13 >More info Col-0 whole plant Original data GEO bulk
298 PNO8 3 h 0.54 >More info 0.12 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
299 sta1 0.59 >More info 0.07 >More info WT Original data GEO bulk
300 ice1 6H Cold 0.58 >More info 0.08 >More info WT 6H Cold Original data GEO bulk
301 ddm1 F6 inflorescence 0.54 >More info 0.11 >More info wt Col inflorescence unopened flower buds Original data
302 Mutant cry1 (High Light) -0.56 >More info -0.08 >More info Col-0 (High Light) Original data GEO bulk
303 ASL9-ox -0.59 >More info -0.05 >More info WT aerial parts of seedlings Original data GEO bulk
304 cry1 high light -0.56 >More info -0.08 >More info Col-O high light Original data GEO bulk
305 ckh1 CK25 0.51 >More info 0.13 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
306 Atwrky63 -0.53 >More info -0.10 >More info Col0 none leaf Original data GEO bulk
307 KAN1-GR 60min 0.53 >More info 0.10 >More info KAN1-GR 0min Original data GEO bulk
308 170G5-16 0.52 >More info 0.11 >More info Ler-2 ~600 pooled 7 mm root tips Original data GEO bulk
309 WT roots - Fe 0.60 >More info 0.03 >More info WT roots + Fe Roots Original data GEO bulk
310 GST 4 h (leaf) 0.50 >More info 0.13 >More info Mock 4 h (leaf) Original data Elicitor treatments
311 swn-7 -0.56 >More info -0.06 >More info Col whole plant Original data GEO bulk
312 AvrRpm1 2 h (leaf) 0.50 >More info 0.12 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
313 SIV pollen tube 0.63 >More info -0.01 >More info drypollen Semi in vivo-grown pollen tubes Original data GEO bulk
314 miR 0h 0.57 >More info 0.05 >More info Col 0h Leaf Original data GEO bulk
315 Nuclear GSH1 0.50 >More info 0.12 >More info Cytoplasmic GSH1 Control Original data GEO bulk
316 Nicotinamide-65hr 0.51 >More info 0.11 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
317 SLWF infested 0.50 >More info 0.12 >More info SLWF uninfested rosette tissue Original data GEO bulk
318 12h-DC3000 hrpA -0.55 >More info -0.06 >More info 12h-DC3000 leaves Original data GEO bulk
319 GR-REV 30min 0.51 >More info 0.10 >More info Col 30min Original data GEO bulk
320 Nicotinamide-61hr 0.50 >More info 0.11 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
321 rao1-1 0.50 >More info 0.11 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
322 pnp1-1 3h +P 0.57 >More info 0.04 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
323 Nicotinamide-89hr 0.51 >More info 0.09 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
324 seedling 24h after Gamma atm-1 0.53 >More info 0.06 >More info seedling day 2 unirradiated atm-1 24h Original data
325 root - 04% oxygen - 30min 0.09 >More info 0.50 >More info root - 21% oxygen - 30min Original data GEO bulk
326 TiO2 germinant -0.53 >More info -0.05 >More info Millipore Water germinant TiO2 seedling Original data
327 hy5 low light -0.54 >More info -0.04 >More info Col-O low light Original data GEO bulk
328 Mutant hy5 -0.54 >More info -0.04 >More info Col-0 Original data GEO bulk
329 ice1 24H Cold 0.50 >More info 0.08 >More info WT 24H Cold Original data GEO bulk
330 WT zebularine 0.50 >More info 0.08 >More info WT mock shoot apical meristem Original data
331 hrcC 0.51 >More info 0.06 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
332 Rsch CA -0.53 >More info -0.04 >More info Col CA Leaves Original data
333 Nuclear GSH2 0.57 >More info 0.00 >More info Cytoplasmic GSH2 Control Original data GEO bulk
334 root - 08% oxygen - 30min -0.02 >More info 0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
335 C2H2 ZF TDNA mutant -0.56 >More info 0.01 >More info Col-WT mature pollen Original data GEO bulk
336 seed germinating in countinuous light 24h SL -0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
337 Laer Alternaria 3dpi -0.57 >More info 0.03 >More info Laer Control leaf discs Original data GEO bulk
338 HairpinZ 4 h (leaf) 0.55 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
339 cdpk6-yfp 0.51 >More info 0.01 >More info Kan seedlings Original data GEO bulk
340 35S:RPS4 rrs1-11 8h -0.54 >More info 0.02 >More info 35S:RPS4 8h leaves Original data
341 cov1 cov2 stem Base 0.53 >More info -0.02 >More info WT stem Base stem Base Original data GEO bulk
342 Flagellin 4 h (leaf) 0.52 >More info -0.01 >More info Mock 4 h (leaf) Original data Elicitor treatments
343 C24 UV1 -0.52 >More info 0.01 >More info C24 mock UV seedling Original data
344 Mt -0.50 >More info -0.00 >More info Col-0 Original data GEO bulk
345 WT 90-105 min Xanthomonas 0.50 >More info -0.01 >More info WT T0 Original data GEO bulk
346 Chemically 0.53 >More info -0.06 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
347 Col PSTDC3000 24h 0.60 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
348 rgs1+sucrose 0.55 >More info -0.09 >More info WT+sucrose rosette leaves Original data GEO bulk
349 root - 01% oxygen - 2h -0.12 >More info 0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
350 sng1 0.54 >More info -0.11 >More info WT aerial region Original data GEO bulk
351 anti-sense for AtAOX1a 0.54 >More info -0.12 >More info WT Original data GEO bulk
352 P. infestans 6 h (leaf) 0.57 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
353 CCA1-ox 6am non-polysomal -0.13 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
354 Shoot apex inflorescence (after bolting) -0.30 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
355 Mutant cry1 -0.62 >More info 0.28 >More info Col-0 Original data GEO bulk
356 cry1 low light -0.62 >More info 0.28 >More info Col-O low light Original data GEO bulk
357 xyl-grown cell culture- 1h 1mM Suc 0.55 >More info -0.33 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
358 P.syringae vir 4 h (leaf) 0.53 >More info -0.38 >More info Mock 4 h (leaf) Original data Elicitor treatments
359 Light 3day hml -0.43 >More info 0.55 >More info 0h hml Original data