4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on AvrRpt2 Col-0 6hpi
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List of experiments correlated with "AvrRpt2 Col-0 6hpi"  Help Download transcriptome of top 30
Score Experiment Correlation from
AvrRpt2 Col-0 6hpi		 Correlation to
AvrRpt2 Col-0 6hpi		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 AvrRpt2 Col-0 6hpi 1.00 >More info 1.00 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
2 Cor 10h 0.82 >More info 0.85 >More info Mock 10h Cor Original data GEO bulk
3 HopZ1a treated 0.84 >More info 0.83 >More info col Original data GEO bulk
4 ataf1-1 mutant Col-0 Bgh inoculated 0.80 >More info 0.85 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
5 35S:RPS4 eds1-2 8h -0.80 >More info -0.83 >More info 35S:RPS4 8h leaves Original data
6 WT Col-0 Bgh inoculated 0.79 >More info 0.84 >More info WT Col-0 Un-inoculated Original data GEO bulk
7 Col-0-avrB-6h 0.79 >More info 0.83 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
8 Cor hrpS 10h 0.80 >More info 0.81 >More info Mock 10h Cor hrpS Original data GEO bulk
9 HopZ1a treated ulp1c ulp1d 0.79 >More info 0.82 >More info col Original data GEO bulk
10 hrcC 0.77 >More info 0.83 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
11 WT flg22 2h 0.78 >More info 0.82 >More info WT 0h Leaf tissue Original data GEO bulk
12 col-5 hrpA 12h 0.75 >More info 0.84 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
13 flu over-tAPX 0.76 >More info 0.83 >More info WT Col Original data GEO bulk
14 col-5 DC3000 12h 0.75 >More info 0.83 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
15 flu 0.76 >More info 0.81 >More info WT Col Original data GEO bulk
16 35S:RPS4 eds1-2 24h -0.78 >More info -0.79 >More info 35S:RPS4 24h leaves Original data
17 Phaseolicola 2 h (leaf) 0.73 >More info 0.84 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
18 Laer Flg22 1h 0.77 >More info 0.79 >More info Laer Control leaf discs Original data GEO bulk
19 Shoot -Cs 0.68 >More info 0.88 >More info Control-shoot Original data GEO bulk
20 GST NPP1 4 h (leaf) 0.76 >More info 0.80 >More info Mock 4 h (leaf) Original data Elicitor treatments
21 WT-SA 0.76 >More info 0.80 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
22 DFPM 0.77 >More info 0.79 >More info control Original data GEO bulk
23 Col whole leaf 7dpi 0.76 >More info 0.79 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
24 ice1 control 0.70 >More info 0.84 >More info WT control Original data GEO bulk
25 Laer Flg22 2h 0.77 >More info 0.77 >More info Laer Control leaf discs Original data GEO bulk
26 hrpA 7h 0.74 >More info 0.80 >More info Mock 7h hrpA Original data GEO bulk
27 35S::ERF104 Flg22 4h 0.74 >More info 0.80 >More info 35S::ERF104 H2O 4h Original data GEO bulk
28 E.coli TUV86 2 fliC 7h 0.75 >More info 0.78 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
29 Pto inoculated 0.74 >More info 0.79 >More info col Original data GEO bulk
30 mpk6-ko Flg22 4h 0.72 >More info 0.81 >More info mpk6-ko H2O 4h Original data GEO bulk
31 B.cinerea 18 h infection 0.75 >More info 0.78 >More info Mock 18 h Original data Botrytis cinerea infection
32 Botrytis cinerea 18h 0.75 >More info 0.78 >More info control 18h Original data GEO bulk
33 DC3000 2 h (leaf) 0.71 >More info 0.81 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
34 Botrytis cinerea 48h 0.77 >More info 0.75 >More info control 48h Original data GEO bulk
35 Laer Flg22+GA 1h 0.76 >More info 0.76 >More info Laer Control leaf discs Original data GEO bulk
36 rosette Dark Wounded 0.71 >More info 0.80 >More info rosette Dark Control Original data GEO bulk
37 Laer Flg22+GA 2h 0.76 >More info 0.75 >More info Laer Control leaf discs Original data GEO bulk
38 WT flg22 1h 0.74 >More info 0.77 >More info WT 0h Leaf tissue Original data GEO bulk
39 hrpA fliC 7h 0.73 >More info 0.78 >More info Mock 7h hrpA fliC Original data GEO bulk
40 Flagellin 4 h (leaf) 0.73 >More info 0.78 >More info Mock 4 h (leaf) Original data Elicitor treatments
41 Col whole leaf 5dpi 0.74 >More info 0.77 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
42 Te ozone 0.82 >More info 0.69 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
43 del1-1 mutant 5d uninfected 0.72 >More info 0.78 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
44 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.82 >More info 0.68 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
45 WT 2-4h Xanthomonas 0.67 >More info 0.83 >More info WT T0 Original data GEO bulk
46 ein2-1 9 hpi A. brassicicola 0.74 >More info 0.76 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
47 CMP 4hr 0.75 >More info 0.75 >More info Acetone 4hr root Original data GEO bulk
48 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.83 >More info 0.67 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
49 Col-0 9 hpi A. brassicicola 0.74 >More info 0.76 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
50 pepr1-1 Pepr2-3 +Pep2 2h -0.70 >More info -0.80 >More info WT +Pep2 2h Pep2 Original data GEO bulk
51 col-5 DC3000-avrRpm 4h 0.72 >More info 0.78 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
52 WT powdery mildew 0.73 >More info 0.77 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
53 Laer treat paclobutrazol (PAC) 0.74 >More info 0.76 >More info Laer Control leaf discs Original data GEO bulk
54 coi1-16 ein2 sid2 ctrl -0.81 >More info -0.68 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
55 Lipopolysaccaride4 h (leaf) 0.71 >More info 0.78 >More info Mock 4 h (leaf) Original data Elicitor treatments
56 E.coli 0157 H7 7h 0.71 >More info 0.77 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
57 col-5 hrpA 2h 0.71 >More info 0.77 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
58 rosette Light Wounded 0.71 >More info 0.77 >More info rosette Light Control Original data GEO bulk
59 erf104-ko Flg22 4h 0.69 >More info 0.79 >More info erf104-ko H2O 4h Original data GEO bulk
60 P.syringae AvrRpt2 4 h (leaf) 0.69 >More info 0.79 >More info Mock 4 h (leaf) Original data Elicitor treatments
61 CMP 24hr 0.74 >More info 0.74 >More info Acetone 24hr root Original data GEO bulk
62 IMI 4mM 0.79 >More info 0.69 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
63 miR393 flg22 2h 0.69 >More info 0.78 >More info WT 0h Leaf tissue Original data GEO bulk
64 gh3.5-1D 48 hpi 0.72 >More info 0.75 >More info Col-0 uninoculated Original data GEO bulk
65 miR393 flg22 1h 0.70 >More info 0.76 >More info WT 0h Leaf tissue Original data GEO bulk
66 seedlings protease IV 0.67 >More info 0.79 >More info seedlings nontreated control whole seedling Original data
67 anac017-2 AntimycinA 3h -0.67 >More info -0.79 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
68 Col-0 ozone 0.82 >More info 0.64 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
69 Col ozone 3h 0.71 >More info 0.75 >More info Col clean-air 3h ozone Original data GEO bulk
70 efr-1 +elf18 10h -0.67 >More info -0.78 >More info WT +elf18 10h elf18 Original data GEO bulk
71 wrky33 Bc inoculation 14h 0.80 >More info 0.64 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
72 CT101 ozone 0.80 >More info 0.64 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
73 ice1 6H Cold 0.65 >More info 0.79 >More info WT 6H Cold Original data GEO bulk
74 AFB1 flg22 2h 0.73 >More info 0.71 >More info WT 0h Leaf tissue Original data GEO bulk
75 ceh1 mutant 0.71 >More info 0.73 >More info Parent line Original data
76 Fenclorim 4hr 0.72 >More info 0.72 >More info Acetone 4hr root Original data GEO bulk
77 Sulfometuron EC50 0.74 >More info 0.70 >More info Carrier Original data GEO bulk
78 Col-0 under 4 days salt 0.71 >More info 0.72 >More info Col-0 under control 4 days salt treatment rosette Original data
79 AFB1 flg22 1h 0.70 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
80 pad4-PsmES4326-24hpi -0.70 >More info -0.72 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
81 Mutant siz1-3 (Drought) 0.69 >More info 0.73 >More info Col-0 (Drought) Original data GEO bulk
82 WT NAA/flg 1h 0.69 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
83 siz1-3 drought 0.69 >More info 0.73 >More info Col-0 drought Original data GEO bulk
84 coi1-16 ein2 sid2 ozone 0.81 >More info 0.61 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
85 Col0-PsmES4326-24hpi 0.81 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
86 mkk1/mkk2 control rep 0.70 >More info 0.72 >More info Col-0 Time 0 rep Original data GEO bulk
87 GST 4 h (leaf) 0.62 >More info 0.80 >More info Mock 4 h (leaf) Original data Elicitor treatments
88 Seedling KUA1-IOX est 0.61 >More info 0.80 >More info Seedling KUA1-IOX mock Original data
89 Col leaves 48h LT 0.62 >More info 0.79 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
90 mkk1/mkk2 24h BTH rep 0.68 >More info 0.73 >More info Col-0 24h BTH rep Original data GEO bulk
91 AgNO3 3 h 0.69 >More info 0.72 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
92 safener treated 0.70 >More info 0.71 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
93 Shoot -K 0.69 >More info 0.72 >More info Control-shoot Original data GEO bulk
94 K starvation (shoot) 0.69 >More info 0.72 >More info Ws (shoot) Original data GEO bulk
95 C24 ozone 0.79 >More info 0.61 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
96 DC3000 7h 0.64 >More info 0.75 >More info Mock 7h DC3000 Original data GEO bulk
97 Imidazolinone EC50 0.65 >More info 0.74 >More info Carrier (Imidazolinone) Original data GEO bulk
98 smg7b-1 0.70 >More info 0.69 >More info WT whole plant Original data GEO bulk
99 Elevated CO2 AMPLE N NIGHT 0.60 >More info 0.78 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
100 Primisulfuron EC50 0.67 >More info 0.71 >More info Carrier (primisulfuron) Original data GEO bulk
101 bak1-3 +Pep2 10h 0.66 >More info 0.72 >More info WT +Pep2 10h Pep2 Original data GEO bulk
102 S58-2 0.62 >More info 0.76 >More info wt Original data GEO bulk
103 Mutant siz1-3 0.66 >More info 0.72 >More info Col-0 Original data GEO bulk
104 Cor 24h 0.66 >More info 0.72 >More info Mock 24h Cor Original data GEO bulk
105 ulp1c ulp1d +Pto 0.64 >More info 0.74 >More info ulp1c ulp1d mock Original data GEO bulk
106 siz1-3 control 0.66 >More info 0.72 >More info Col-0 control Original data GEO bulk
107 +1.6 mM Tween 20 1 h. 0.58 >More info 0.80 >More info +distilled water 1 h. Original data GEO bulk
108 PAHs stress 0.68 >More info 0.70 >More info exp control phenanthrene whole plants Original data GEO bulk
109 CMV-WT 0.66 >More info 0.71 >More info Mock-At Aerial tissues Original data GEO bulk
110 pmr5 pmr6 0.64 >More info 0.73 >More info Col-0 Original data GEO bulk
111 WT-NOCO2 INFECTED 0.66 >More info 0.71 >More info WT-MOCK Original data GEO bulk
112 UV 0.71 >More info 0.66 >More info WT aerial region Original data GEO bulk
113 SLWF infested 0.63 >More info 0.74 >More info SLWF uninfested rosette tissue Original data GEO bulk
114 35S::PI ap3-3 35S::AP-GR +DEX 0.56 >More info 0.80 >More info 0hr DEX Original data GEO bulk
115 mil4 BTH 0.66 >More info 0.70 >More info Col BTH rosettes Original data GEO bulk
116 dor drought 0.63 >More info 0.73 >More info WT drought Original data GEO bulk
117 cpr5 0.64 >More info 0.72 >More info WT seedling Original data GEO bulk
118 DC3000 24h 0.67 >More info 0.69 >More info Mock 24h DC3000 Original data GEO bulk
119 npr1-1 SA -0.71 >More info -0.64 >More info Col-0 SA complete seedling Original data
120 CLO 4mM 0.66 >More info 0.69 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
121 msh1 albino 0.67 >More info 0.68 >More info WT aerial part Original data GEO bulk
122 WT Bc inoculation 14h 0.76 >More info 0.59 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
123 dde2-2 9 hpi A. brassicicola 0.64 >More info 0.71 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
124 WT +elf18 10h 0.65 >More info 0.70 >More info WT untreated elf18 Original data GEO bulk
125 Col ozone 2d 0.59 >More info 0.76 >More info Col clean-air 2d ozone Original data GEO bulk
126 seedlings-week-old RECA1-overexpressing
transgenic		 0.59 >More info 0.76 >More info seedlings-week-old Col-0 seedlings Original data
127 ice1 3H Cold 0.67 >More info 0.67 >More info WT 3H Cold Original data GEO bulk
128 sid2 -0.66 >More info -0.68 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
129 pnp1-1 3h +P 0.66 >More info 0.68 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
130 Laer pretreat GA Flg22 1h 0.63 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
131 eds16 whole leaf 5dpi -0.61 >More info -0.73 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
132 Elevated CO2 AMPLE N DAY 0.61 >More info 0.73 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
133 csn5 (csn5a-2 csn5b) light 0.71 >More info 0.63 >More info WT light Original data GEO bulk
134 Wounding Stress3 h (shoot) 0.63 >More info 0.71 >More info Stress mock 3 h (shoot) Original data Stress treatments
135 Osmotic Stress 24 h (shoot) 0.66 >More info 0.67 >More info Stress mock 24 h (shoot) Original data Stress treatments
136 Col-0 Flg22 4h 0.56 >More info 0.77 >More info Col-0 H2O 4h Original data GEO bulk
137 Mutant gh3.5-1D (AvrRpt2) 0.60 >More info 0.73 >More info Col-0 (AvrRpt2) Original data GEO bulk
138 Col-0 low oxygen 0.64 >More info 0.69 >More info Col-0 Original data GEO bulk
139 pvip1 pvip2 0.62 >More info 0.71 >More info Col-0 whole rosettes Original data GEO bulk
140 ABA DFPM 0.66 >More info 0.67 >More info control Original data GEO bulk
141 leaf13 0.64 >More info 0.68 >More info unwounded leaves none Original data GEO bulk
142 AvrRpm1 2 h (leaf) 0.58 >More info 0.74 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
143 cpr5scv1 0.61 >More info 0.71 >More info WT(COL) Original data GEO bulk
144 UV Stress 24 h (shoot) 0.59 >More info 0.73 >More info Stress mock 24 h (shoot) Original data Stress treatments
145 Cycloheximide 3 h 0.61 >More info 0.71 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
146 Col-0 SA 0.63 >More info 0.69 >More info Col-0 Original data GEO bulk
147 Col-Luc WT 3h antimycin A 0.61 >More info 0.71 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
148 oligomycin 4 h 0.64 >More info 0.67 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
149 Atss3 Light4 -0.59 >More info -0.72 >More info Atss3 Dark0.5 Original data GEO bulk
150 Dex-rga(delta17) 4h GA4+DEX -0.62 >More info -0.69 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
151 aba3-1 0.51 >More info 0.80 >More info wt Original data GEO bulk
152 pmr5 0.58 >More info 0.73 >More info Col-0 Original data GEO bulk
153 WT +elf18 2h 0.57 >More info 0.73 >More info WT untreated elf18 Original data GEO bulk
154 Leafminer locally damaged thaliana seedlings 0.61 >More info 0.69 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
155 WT NAA/flg 2h 0.60 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
156 chito-octamer 0.57 >More info 0.72 >More info Col Mock Original data GEO bulk
157 cpr5npr1 0.61 >More info 0.68 >More info WT(COL) Original data GEO bulk
158 LTN008-2 aza-dc 0.69 >More info 0.60 >More info LTN012-2 Mock Original data
159 gun1gun5 far-red pretreated -0.59 >More info -0.70 >More info WT far-red pretreated Original data GEO bulk
160 lht1 PstDC3000 48h 0.61 >More info 0.68 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
161 Triazolopyrimidine EC50 0.64 >More info 0.65 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
162 Laer pretreat GA+JA Flg22 0h 0.67 >More info 0.61 >More info Laer pretreat water control leaf discs Original data GEO bulk
163 shoots bhlh100/101 0uM Fe 0.62 >More info 0.66 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
164 ice1 24H Cold 0.61 >More info 0.67 >More info WT 24H Cold Original data GEO bulk
165 Pst-DC3000(avrRpm1)-4hpi 0.65 >More info 0.63 >More info Pst-DC3000-4hpi Original data GEO bulk
166 sid2-2 9 hpi A. brassicicola 0.64 >More info 0.64 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
167 ced1 -0.65 >More info -0.63 >More info WT PEG 6hr seedlings Original data GEO bulk
168 WT cold 0.57 >More info 0.71 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
169 pnp1-1 1wk +P 0.71 >More info 0.57 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
170 abh1 -ABA 0.53 >More info 0.74 >More info Col-0 -ABA Original data GEO bulk
171 RPL18 TuMV inoculated total RNA 0.56 >More info 0.71 >More info mock inoculated total RNA PO Original data GEO bulk
172 gai Control 0.59 >More info 0.68 >More info Laer Control leaf discs Original data GEO bulk
173 oas-a1.1 Cd 24h 0.50 >More info 0.76 >More info Cd 24h root Shoot Original data GEO bulk
174 toc1-1-77hr 0.65 >More info 0.61 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
175 camta1/2/3 warm 0.58 >More info 0.68 >More info WT warm entire aerial part Original data GEO bulk
176 aerial organ callus inducing medium 96 h 0.59 >More info 0.67 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
177 cpr5 0.57 >More info 0.69 >More info WT(COL) Original data GEO bulk
178 Laer pretreat JA Flg22 1h 0.64 >More info 0.61 >More info Laer pretreat water control leaf discs Original data GEO bulk
179 RPL18 TuMV inoculated polysomal RNA 0.56 >More info 0.69 >More info mock inoculated polysomal RNA PO Original data GEO bulk
180 albino Ds13-2198-1 -0.59 >More info -0.66 >More info control Original data GEO bulk
181 rosettes WT drought 0.64 >More info 0.61 >More info rosettes WT watered Original data GEO bulk
182 vte2-1 3d vernalization 0.57 >More info 0.68 >More info WT 3d vernalization Original data GEO bulk
183 Light 3day wt -0.63 >More info -0.62 >More info 0h wt Original data
184 sid2-1 cold -0.58 >More info -0.67 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
185 OH1 0.58 >More info 0.67 >More info Col-0 leaves Original data GEO bulk
186 S15-118 0.56 >More info 0.69 >More info wt Original data GEO bulk
187 chito-tetramer 0.54 >More info 0.70 >More info Col Mock Original data GEO bulk
188 pnp1-1 1wk -P 0.67 >More info 0.57 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
189 AZC 0.62 >More info 0.62 >More info noneHS Original data GEO bulk
190 Leaf GLU1-KO 0.57 >More info 0.67 >More info Leaf Col(0) rosette leaves Original data GEO bulk
191 Col-0 48 hpi 0.58 >More info 0.66 >More info Col-0 uninoculated Original data GEO bulk
192 npr1-PsmES4326-24hpi -0.60 >More info -0.64 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
193 phr1 phl1 Root-Pi 0.61 >More info 0.63 >More info WT Shoot+Pi roots Original data GEO bulk
194 OE WRKY63.3 high light 0.58 >More info 0.66 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
195 8h-DC3000 avrRpm1 0.60 >More info 0.64 >More info 8h-DC3000 leaves Original data GEO bulk
196 bio4-1 mutant leaves 0.47 >More info 0.77 >More info WT leaves leaves Original data GEO bulk
197 cpr5npr1svi1 0.47 >More info 0.77 >More info WT(COL) Original data GEO bulk
198 csn3-1 light 0.65 >More info 0.58 >More info WT light Original data GEO bulk
199 Col-0 INA 48h 0.55 >More info 0.68 >More info Col-0 MOCK 48h Original data GEO bulk
200 Laer pretreat GA+JA Flg22 1h 0.62 >More info 0.61 >More info Laer pretreat water control leaf discs Original data GEO bulk
201 cat2-2; 8h switch to ambient CO2 concentrations; 0.62 >More info 0.61 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
202 WT+H2O2 0.55 >More info 0.68 >More info WT H2O2 Original data GEO bulk
203 scrm-D 0.63 >More info 0.60 >More info Col-0 WT whole seedling Original data GEO bulk
204 Col-0 flu HL 3h 0.57 >More info 0.66 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
205 35S:VND7-VP16-GR+CHX 0.57 >More info 0.66 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
206 Cd 24h root -0.52 >More info -0.71 >More info WT-Untreated Shoot Original data GEO bulk
207 Col-0 drought 0.65 >More info 0.58 >More info Col-0 control Original data GEO bulk
208 Chitosan 3h Treatment 0.64 >More info 0.59 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
209 sta1 0.59 >More info 0.63 >More info WT Original data GEO bulk
210 Dex-rga(delta17) 2h GA4+DEX -0.57 >More info -0.65 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
211 Cold Stress 24 h (shoot) 0.57 >More info 0.65 >More info Stress mock 24 h (shoot) Original data Stress treatments
212 bZIP1ko mutant N+Light- 0.50 >More info 0.72 >More info WT-sib N+Light- whole plant Original data GEO bulk
213 SA 4mM 0.69 >More info 0.53 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
214 Laer pretreat JA Flg22 2h 0.65 >More info 0.57 >More info Laer pretreat water control leaf discs Original data GEO bulk
215 atgsnor1-1 -0.60 >More info -0.61 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
216 Mutant cry1 (High Light) -0.59 >More info -0.62 >More info Col-0 (High Light) Original data GEO bulk
217 rao2 H2O2 3h -0.59 >More info -0.62 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
218 WT in -N 0.61 >More info 0.60 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
219 WT AntimycinA 3h 0.53 >More info 0.68 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
220 cry1 high light -0.59 >More info -0.62 >More info Col-O high light Original data GEO bulk
221 Laer Alternaria 3dpi -0.54 >More info -0.66 >More info Laer Control leaf discs Original data GEO bulk
222 nia1nia2 0.55 >More info 0.65 >More info Col-0 whole seedlings Original data GEO bulk
223 Fenclorim 24hr 0.57 >More info 0.63 >More info Acetone 24hr root Original data GEO bulk
224 WT 3h -P 0.58 >More info 0.62 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
225 WT resupplied Pi 4h 0.58 >More info 0.62 >More info WT complete seedlings Original data
226 aerial organ callus inducing medium 48 h 0.57 >More info 0.63 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
227 penta Alternaria 3dpi 0.62 >More info 0.58 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
228 vte2 leaves 48h LT 0.57 >More info 0.63 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
229 miR393 0h -0.45 >More info -0.75 >More info WT 0h Leaf tissue Original data GEO bulk
230 WT+chitooctaose 0.47 >More info 0.73 >More info WT+water chitooctaose seedlings Original data GEO bulk
231 Salt Stress 24 h (shoot) 0.57 >More info 0.62 >More info Stress mock 24 h (shoot) Original data Stress treatments
232 coi1-2 0.50 >More info 0.69 >More info Col-0 mock Whole seedling Original data GEO bulk
233 camta2/3 warm 0.52 >More info 0.67 >More info WT warm entire aerial part Original data GEO bulk
234 penta Pst DC3000 12hpi 0.60 >More info 0.59 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
235 lht1 untreated 0.53 >More info 0.66 >More info WT untreated untreated leaf Original data GEO bulk
236 cs26 long day 0.53 >More info 0.66 >More info Leaves-WT-LD leaf Original data GEO bulk
237 Laer pretreat GA+JA Flg22 2h 0.59 >More info 0.60 >More info Laer pretreat water control leaf discs Original data GEO bulk
238 Col-0 C2H4 24h 0.57 >More info 0.62 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
239 WT 90-105 min Xanthomonas 0.45 >More info 0.74 >More info WT T0 Original data GEO bulk
240 wt systemic wounding 0.55 >More info 0.63 >More info wt control leaves Original data GEO bulk
241 ASL9-ox -0.58 >More info -0.60 >More info WT aerial parts of seedlings Original data GEO bulk
242 edr1 18 h powdery mildew 0.57 >More info 0.61 >More info Col-0 18 h powdery mildew Original data GEO bulk
243 irradiated leaf (WT 1d) 0.56 >More info 0.61 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
244 Leafminer damaged seedlings 0.61 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
245 anac017-1 H2O2 3h -0.55 >More info -0.62 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
246 Differentiation 12h 0.52 >More info 0.65 >More info Differentiation 0h leaves Original data
247 sni1 0.52 >More info 0.65 >More info WT Original data GEO bulk
248 root Dosed gold 0.56 >More info 0.61 >More info root No gold .125 mM gold 24 h roots Original data
249 35:SUB1A 0.63 >More info 0.54 >More info WT whole seedling Original data GEO bulk
250 0.125 mM gold 24 h 0.56 >More info 0.61 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
251 WT chitooctaose 0.49 >More info 0.68 >More info WT water Original data GEO bulk
252 mkk2 24h BTH rep 0.51 >More info 0.65 >More info Col-0 24h BTH rep Original data GEO bulk
253 WT 24h cold 0.53 >More info 0.63 >More info WT warm 24h cold entire aerial part Original data GEO bulk
254 Laer pretreat GA Flg22 0h 0.68 >More info 0.48 >More info Laer pretreat water control leaf discs Original data GEO bulk
255 TNT-seedlings 0.52 >More info 0.64 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
256 Glyphosate EC50 0.59 >More info 0.57 >More info Carrier (Glyphosate) Original data GEO bulk
257 Dark 3day ivd 0.60 >More info 0.55 >More info 0h ivd Original data
258 D2O 0.59 >More info 0.56 >More info H2O seedling Original data GEO bulk
259 WT 24H Cold 0.51 >More info 0.64 >More info WT control Original data GEO bulk
260 DC3000 hrcC 2 h (leaf) 0.50 >More info 0.65 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
261 Elevated CO2 fully expanded leaf 0.59 >More info 0.55 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
262 Mature callus 0.60 >More info 0.54 >More info Young callus hypocotyls Original data GEO bulk
263 aerial organ callus inducing medium 24h 0.52 >More info 0.62 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
264 Col whole leaf amplified 5 dpi 0.52 >More info 0.62 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
265 P.p 2.5hai 0.48 >More info 0.66 >More info At-Control roots Original data GEO bulk
266 camta1/3 warm 0.41 >More info 0.73 >More info WT warm entire aerial part Original data GEO bulk
267 col-5 DC3000 4h 0.41 >More info 0.73 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
268 Col 3d 0.45 >More info 0.69 >More info Col CA Leaves Original data
269 Col BTH 0.46 >More info 0.67 >More info Col rosettes Original data GEO bulk
270 P.p 6hai 0.50 >More info 0.63 >More info At-Control roots Original data GEO bulk
271 Nicotinamide-53hr 0.56 >More info 0.57 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
272 smg5-2 0.57 >More info 0.56 >More info WT whole plant Original data GEO bulk
273 WT no Pi 0.56 >More info 0.57 >More info WT complete seedlings Original data
274 aerial organ callus inducing medium 12 h 0.48 >More info 0.65 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
275 WT Seedling BL -0.49 >More info -0.64 >More info WT Seedling Dark Original data GEO bulk
276 pho1 0.57 >More info 0.55 >More info Col2WT Original data GEO bulk
277 OE WRKY63.3 0.50 >More info 0.62 >More info OE WRKY40.4 none leaf Original data GEO bulk
278 apum23 0.53 >More info 0.59 >More info WT (Col-3) aerial parts Original data GEO bulk
279 Bur-0-3h IAA 0.57 >More info 0.55 >More info Bur-0h IAA whole plant Original data GEO bulk
280 5-Triiodobenzoic acid3 h 0.53 >More info 0.59 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
281 pmr4-1 control 0.57 >More info 0.55 >More info WT control uninoculated Original data GEO bulk
282 P.p 10.5hai 0.44 >More info 0.68 >More info At-Control roots Original data GEO bulk
283 P.p 30hai 0.47 >More info 0.65 >More info At-Control roots Original data GEO bulk
284 abi4 vtc2 (I) 0.49 >More info 0.63 >More info Col (I) rosette Original data GEO bulk
285 col-5 hrpA 4h 0.48 >More info 0.64 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
286 Col-0 DCA 48h 0.46 >More info 0.65 >More info Col-0 MOCK 48h Original data GEO bulk
287 npr1-3 MOCK 48h -0.51 >More info -0.60 >More info Col-0 MOCK 48h Original data GEO bulk
288 clf-28 swn-7 0.57 >More info 0.54 >More info Col whole plant Original data GEO bulk
289 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.53 >More info 0.58 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
290 ani1 T0.5 -0.38 >More info -0.73 >More info WT T0.5 root tissue Original data GEO bulk
291 treated group 0.53 >More info 0.57 >More info Control group Original data
292 ws 24h4c q8ws 0.57 >More info 0.53 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
293 toc1-1-49hr 0.51 >More info 0.59 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
294 ppi2 0.55 >More info 0.55 >More info WT whole plant Original data GEO bulk
295 Norflurazon 0.45 >More info 0.65 >More info Col-0 Original data GEO bulk
296 arf2 brz -0.48 >More info -0.62 >More info arf2 mock Original data GEO bulk
297 npr1 sni1 brca2a SA -0.49 >More info -0.61 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
298 Norflurazon 0.45 >More info 0.65 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
299 A. thaliana-A. lyrata hybrid -0.46 >More info -0.64 >More info A. thaliana mature leaves before flowering Original data GEO bulk
300 aox1a(line) MLD stressed 0.54 >More info 0.55 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
301 35S:RPS4 eds1-2 2h -0.41 >More info -0.68 >More info 35S:RPS4 2h leaves Original data
302 Rsch 1d 0.44 >More info 0.65 >More info Rsch CA Leaves Original data
303 WT seedlings MV 0.51 >More info 0.58 >More info WT seedlings control Seedlings Original data GEO bulk
304 Col leaf scrape 5 dpi 0.57 >More info 0.52 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
305 9 hr Hypoxia 1 hr recovery IP RNA 0.52 >More info 0.57 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
306 ARR22-ox (t-zeatin 3 h) 0.59 >More info 0.50 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
307 Compost 0.48 >More info 0.61 >More info Perlite Compost Original data GEO bulk
308 Rsch 8h 0.40 >More info 0.69 >More info Rsch CA Leaves Original data
309 eds16 whole leaf 7dpi -0.46 >More info -0.62 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
310 rosette leaves lcr 0.31 >More info 0.77 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
311 vtc2 (I) 0.47 >More info 0.61 >More info Col (I) rosette Original data GEO bulk
312 pad2-PsmES4326-24hpi -0.52 >More info -0.55 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
313 cdpk6-yfp 0.54 >More info 0.53 >More info Kan seedlings Original data GEO bulk
314 WT roots - Fe 0.55 >More info 0.52 >More info WT roots + Fe Roots Original data GEO bulk
315 sicy-192 gun1-101 cotyledons 0.51 >More info 0.56 >More info WT cotyledons cotyledons Original data
316 gpa1 -ABA GC -0.39 >More info -0.68 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
317 8hr-pH4.5 0.49 >More info 0.58 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
318 upf3 0.49 >More info 0.58 >More info WT whole plant Original data GEO bulk
319 HSP90 Reduced RNAi-A3 0.55 >More info 0.51 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
320 sicy-192 cotyledons 0.44 >More info 0.62 >More info WT cotyledons cotyledons Original data
321 WT 1wk -P 0.56 >More info 0.49 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
322 GO5; 8h switch to ambient CO2 concentrations; 0.43 >More info 0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
323 scrm-D:mute 0.57 >More info 0.48 >More info Col-0 WT whole seedling Original data GEO bulk
324 rcf1-1 cold 24h 0.50 >More info 0.54 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
325 low water potential 0.56 >More info 0.48 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
326 Ws leaf 100mM NaCl 0.43 >More info 0.61 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
327 oas-a1.1 Cd 18h 0.40 >More info 0.64 >More info Cd 18h root Root Original data GEO bulk
328 R. solani AG8 0.49 >More info 0.55 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
329 Ws 100mM NaCl 0.43 >More info 0.61 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
330 PBZ 0.44 >More info 0.60 >More info none PBZ Rosette Original data GEO bulk
331 NJ15 0.32 >More info 0.72 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
332 spx1 spx2 complete 0.55 >More info 0.48 >More info WT complete seedlings Original data
333 short 12-degree- 0.43 >More info 0.60 >More info control short Original data GEO bulk
334 inhibitor A Treated 0.40 >More info 0.63 >More info Negative Control Original data GEO bulk
335 MYB46-GR DEX 0.44 >More info 0.59 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
336 gpa1 -ABA LF 0.46 >More info 0.57 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
337 JA 0.46 >More info 0.57 >More info Col-0 mock Whole seedling Original data GEO bulk
338 Heat shock optimum 0.38 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
339 Transgenic LEC2GR Seedling 1h Dex 0.49 >More info 0.54 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
340 nia1nia2noa1-2 0.47 >More info 0.56 >More info Col-0 whole seedlings Original data GEO bulk
341 WT light -0.48 >More info -0.55 >More info WT dark Original data GEO bulk
342 rosettes myoox drought 0.56 >More info 0.46 >More info rosettes myoox watered Original data GEO bulk
343 anac017-2 H2O2 3h -0.57 >More info -0.45 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
344 toc1-1-53hr 0.53 >More info 0.49 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
345 phr1 Shoot-Pi -0.48 >More info -0.54 >More info WT Root-Pi shoots Original data GEO bulk
346 sid2-PsmES4326-24hpi -0.48 >More info -0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
347 Stem tissue 5 days NAA 0.43 >More info 0.59 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
348 vtc1 (II) 0.43 >More info 0.59 >More info Col (II) rosette Original data GEO bulk
349 camta1/2/3 24h cold 0.40 >More info 0.62 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
350 MIL4 ox BTH 0.44 >More info 0.58 >More info Col BTH Original data GEO bulk
351 Col 1d 0.40 >More info 0.62 >More info Col CA Leaves Original data
352 seedlings +5AC 0.58 >More info 0.43 >More info control seedlings 10-day old whole seedling Original data GEO bulk
353 Truncated AC2 T2 -0.65 >More info -0.36 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
354 ataf1-1 mutant Col-0 Un-inoculated -0.52 >More info -0.49 >More info WT Col-0 Un-inoculated Original data GEO bulk
355 apk1 apk2 0.51 >More info 0.50 >More info Col0-control whole rosette Original data GEO bulk
356 col 24h4c set4 0.50 >More info 0.51 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
357 eif3h polysome 0.53 >More info 0.48 >More info WT polysome Original data GEO bulk
358 Mutant arf2 (etiol) 0.42 >More info 0.59 >More info Col (etiol) Original data GEO bulk
359 arf2 mock 0.42 >More info 0.59 >More info Col mock Original data GEO bulk
360 6h +Pi -0.42 >More info -0.59 >More info 6h -Pi root Original data GEO bulk
361 GSH 0.43 >More info 0.58 >More info control GSH treated seedlings Original data GEO bulk
362 35S:RPS4 rrs1-11 8h -0.46 >More info -0.55 >More info 35S:RPS4 8h leaves Original data
363 tt4 0.40 >More info 0.61 >More info Col-0 aerial part Original data
364 IRP1-OE-Fe--shoot 0.41 >More info 0.60 >More info COL-0-Fe--shoot shoot Original data
365 csn4-1 dark 0.55 >More info 0.45 >More info WT light Original data GEO bulk
366 short 8-degree- 0.43 >More info 0.57 >More info control short Original data GEO bulk
367 edr1 36 h powdery mildew 0.39 >More info 0.61 >More info Col-0 36 h powdery mildew Original data GEO bulk
368 GA 0.31 >More info 0.69 >More info none GA Rosette Original data GEO bulk
369 Seedling-HeatStressed TOTALmRNA 0.43 >More info 0.57 >More info Seedling-control TOTALmRNA seedling Original data
370 Col-0-3h IAA 0.53 >More info 0.46 >More info Col-0-0h IAA whole plant Original data GEO bulk
371 WT +Pep2 2h 0.64 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
372 atmospheric CO2 low Mg shoot 0.52 >More info 0.47 >More info atmospheric CO2 normal Mg shoot Shoot Original data
373 Mutant coi1(leaf) -0.43 >More info -0.56 >More info Col-0 (leaf) Original data GEO bulk
374 plant (tga2-5-6) 4h phytoprostane A1 0.49 >More info 0.50 >More info plant (tga2-5-6) 4h control Original data GEO bulk
375 npr1 sni1 SA 0.36 >More info 0.63 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
376 Heat shock 20%Inhibition 0.47 >More info 0.52 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
377 OsSAP11 expressing -0.40 >More info -0.59 >More info WT seedlings Original data GEO bulk
378 1 h Light Total RNA -0.35 >More info -0.64 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
379 gpa1-4/agb1-2 ozone 2d -0.37 >More info -0.62 >More info Col ozone 2d ozone Original data GEO bulk
380 SPT4-R3 seedlings0 DAS 0.52 >More info 0.46 >More info Col-0 seedlings0 DAS seedlings Original data
381 msh1 recA3 heat shock 0.48 >More info 0.50 >More info WT heat shock above-ground parts Original data GEO bulk
382 rao1-2 3h antimycin A -0.48 >More info -0.50 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
383 rcf1-1 cold 12h 0.47 >More info 0.51 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
384 cop1 Seedling Dark -0.40 >More info -0.58 >More info WT Seedling Dark Original data GEO bulk
385 fls1-3 0.37 >More info 0.61 >More info Col-0 Rosette leaves Original data
386 Nicotinamide-81hr 0.55 >More info 0.42 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
387 Laer pretreat GA Flg22 2h 0.54 >More info 0.43 >More info Laer pretreat water control leaf discs Original data GEO bulk
388 eif3h 0.55 >More info 0.42 >More info WT Original data GEO bulk
389 20d after anthesis 0.51 >More info 0.46 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
390 penta Control 0.53 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
391 Col leaf 100mM NaCl 0.36 >More info 0.61 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
392 petiole in D 0.42 >More info 0.55 >More info petiole in WL petioles Original data GEO bulk
393 Col leaf 100mM NaCl 0.36 >More info 0.61 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
394 upf1 0.46 >More info 0.51 >More info WT whole plant Original data GEO bulk
395 Nicotinamide-73hr 0.47 >More info 0.50 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
396 Nicotinamide-49hr 0.47 >More info 0.50 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
397 Col 100mM NaCl 0.36 >More info 0.61 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
398 1 h Light IP RNA -0.35 >More info -0.62 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
399 irradiated leaf (cmt 1d) 0.45 >More info 0.52 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
400 WT cold 0.45 >More info 0.52 >More info WT control All aerial tissue Original data GEO bulk
401 Rsch 3d 0.36 >More info 0.61 >More info Rsch CA Leaves Original data
402 ERF96OE 0.44 >More info 0.53 >More info WT leaf Original data
403 AsAKiin11 T2 0.44 >More info 0.53 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
404 Col-0 V. longisporum-inoculated 48 hpi 0.41 >More info 0.56 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
405 Hydrogen Peroxide 500 uM 0.40 >More info 0.56 >More info Control RB and PER Hydrogen Peroxide Original data
406 SA 0.53 >More info 0.43 >More info WT mock Whole seedling Original data GEO bulk
407 rosette leaves fdh 0.31 >More info 0.65 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
408 Heat and anoxia 0.41 >More info 0.55 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
409 Lip0 UV 0.55 >More info 0.40 >More info Lip0 mock UV seedling Original data
410 short 10-degree- 0.40 >More info 0.55 >More info control short Original data GEO bulk
411 leaf blade in D 0.37 >More info 0.58 >More info leaf blade in WL leaf blades Original data GEO bulk
412 gpa1 +ABA GC -0.33 >More info -0.62 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
413 pepr1-1 Pepr2-3 +Pep2 10h -0.36 >More info -0.59 >More info WT +Pep2 10h Pep2 Original data GEO bulk
414 eif3h non-polysome 0.54 >More info 0.40 >More info WT non-polysome Original data GEO bulk
415 Full AC2 T2 0.54 >More info 0.40 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
416 Salt Stress 24 h (root) 0.39 >More info 0.55 >More info Stress mock 24 h (root) Original data Stress treatments
417 Mutant arf19-1 0.38 >More info 0.56 >More info Col Original data GEO bulk
418 Selenate (root) 0.38 >More info 0.56 >More info Ws (root) Original data GEO bulk
419 Root Selenate 0.38 >More info 0.56 >More info Root control 40 micromolar selenate Root Original data GEO bulk
420 Seedling-HeatStressed POLYSOMESmRNA 0.40 >More info 0.54 >More info Seedling-control POLYSOMESmRNA seedling Original data
421 ARR21C-ox 0.50 >More info 0.44 >More info Col-0 Original data ARR21C overexpression
422 Red/FR Light45min 0.11 >More info 0.83 >More info FarRed Light 45min Original data Light treatments
423 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.44 >More info -0.50 >More info 2d dark-grown WT seedling Original data GEO bulk
424 wavy 0.35 >More info 0.59 >More info WT Original data GEO bulk
425 bHLH122 ox -0.34 >More info -0.60 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
426 ABA control 0.41 >More info 0.53 >More info No ABA control Original data GEO bulk
427 9 hr Hypoxia 1 hr recovery Total RNA 0.44 >More info 0.50 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
428 Col whole leaf 6hpi 0.39 >More info 0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
429 overexpresser LBD38 in -N -0.52 >More info -0.41 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
430 FarRed Light 45min -0.23 >More info -0.70 >More info White Light 45min Original data Light treatments
431 rosette leaves bdg 0.18 >More info 0.75 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
432 cell culture 4 h phytoprostane A1 0.38 >More info 0.54 >More info cell culture 4 h control Original data GEO bulk
433 Salicylic Acid 3 h 0.41 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
434 Col-0 norflurazon 0.42 >More info 0.50 >More info Col-0 control Original data GEO bulk
435 amiR-tor induced 6d 0.34 >More info 0.58 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
436 IRP1-OE-Ctrl--root 0.33 >More info 0.59 >More info COL-0-Ctrl--root root Original data
437 gun1-9 norflurazon 0.51 >More info 0.40 >More info gun1-9 control Original data GEO bulk
438 sfr3 cold 0.54 >More info 0.37 >More info WT-cold aerial tissues Original data GEO bulk
439 Col-0 37C 0.40 >More info 0.51 >More info Col-0 22C Original data GEO bulk
440 aba1 hypocotyl 0.35 >More info 0.56 >More info Ler hypocotyl hypocotyl Original data GEO bulk
441 long 17-degree- 0.34 >More info 0.57 >More info control long Original data GEO bulk
442 rsa3-1 Na 24h 0.32 >More info 0.59 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
443 Col(gl) leaf 0mM NaCl 0.37 >More info 0.53 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
444 Col(gl) 0mM NaCl 0.37 >More info 0.53 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
445 (Col-0)+100 uM As 0.36 >More info 0.54 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
446 AtLysM RLK1 mutant chitooctaose -0.40 >More info -0.50 >More info WT chitooctaose Original data GEO bulk
447 cop1 Seedling BL 0.40 >More info 0.50 >More info WT Seedling BL Original data GEO bulk
448 M6PR transgenic leaf 100mM NaCl -0.31 >More info -0.59 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
449 Cambium 5 days NAA 0.31 >More info 0.59 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
450 A6 mutant 0.32 >More info 0.58 >More info WT rosette leaves Rosette leaves Original data GEO bulk
451 OE WRKY40.4 high light 0.29 >More info 0.61 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
452 4C 24h(SOIL) 0.34 >More info 0.55 >More info 4C 0h(SOIL) Original data GEO bulk
453 current injection 0.36 >More info 0.53 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
454 Te 1d 0.36 >More info 0.53 >More info Te CA Leaves Original data
455 (Col-0)+200 uM As 0.34 >More info 0.54 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
456 auxin and brassinazole seedlings 0.53 >More info 0.35 >More info auxin seedlings Original data GEO bulk
457 WT-Dry 0.26 >More info 0.62 >More info WT-CK dehydration treatment 1h Original data
458 Time-0 chr11-1chr17-1 -0.38 >More info -0.50 >More info Time-0 Col-0 leaf explants Original data
459 tunicamycin -0.30 >More info -0.58 >More info DMF Original data GEO bulk
460 4C 7d(SOIL) 0.33 >More info 0.54 >More info 4C 0h(SOIL) Original data GEO bulk
461 AtMYB30-ox 2-4h Xanthomonas 0.65 >More info 0.22 >More info WT 2-4h Xanthomonas Original data GEO bulk
462 1h +Pi -0.24 >More info -0.63 >More info 1h -Pi root Original data GEO bulk
463 35S:RPS4 rrs1-11 24h -0.55 >More info -0.31 >More info 35S:RPS4 24h leaves Original data
464 ein2-PsmES4326-24hpi -0.34 >More info -0.52 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
465 gh3.5D uninoculated -0.31 >More info -0.55 >More info Col-0 48 hpi Original data GEO bulk
466 S14-150 0.33 >More info 0.53 >More info wt Original data GEO bulk
467 Rose Bengal 0.5 uM 0.18 >More info 0.68 >More info Control RB and PER Rose Bengal Original data
468 ein5-1 ski2-3 0.35 >More info 0.51 >More info Col-0 aerial tissue Original data
469 SCR-GR Time 12H Dex 0.36 >More info 0.50 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
470 WT H2O2 3h 0.29 >More info 0.57 >More info WT water 3h 3h_H2O2 Original data GEO bulk
471 Expanding leaf -0.56 >More info -0.29 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
472 Col laser microdissected 5 dpi 0.33 >More info 0.52 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
473 Col-O high light 0.31 >More info 0.54 >More info Col-O bule light Original data GEO bulk
474 bio4-1 mutant watered00µM biotin leaves -0.25 >More info -0.60 >More info bio4-1 mutant leaves leaves Original data GEO bulk
475 camta3-2 0.31 >More info 0.53 >More info WT Original data GEO bulk
476 ckh1 CK200 0.31 >More info 0.53 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
477 root protoplasts 40 mM NaCl 0.30 >More info 0.54 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
478 ML (Mature leaves) 35DAS -0.53 >More info -0.30 >More info Control for tissue data Original data GEO bulk
479 pskr1-5 -0.53 >More info -0.30 >More info wild type Cotyledons Original data GEO bulk
480 Mutant lwd1_lwd2 0.23 >More info 0.60 >More info Wildtype for phy mutants Original data GEO bulk
481 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.23 >More info 0.60 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
482 Light 0.25 >More info 0.58 >More info Control Original data GEO bulk
483 ORS1 induced 0.24 >More info 0.59 >More info mock-induced rosette leaves Original data GEO bulk
484 pmr4-1 powdery mildew 0.23 >More info 0.60 >More info WT powdery mildew uninoculated Original data GEO bulk
485 CAX1/CAX3 mutant 0.30 >More info 0.52 >More info Col whole plant Original data GEO bulk
486 Tsu-1 -Fe 24h 0.32 >More info 0.50 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
487 Tsu -Fe 24h Roots 0.32 >More info 0.50 >More info Tsu +Fe 24h Roots Original data GEO bulk
488 seedling 12h after HZE WT 0.30 >More info 0.52 >More info seedling day 1 unirradiated WT 12h Original data
489 0h hml 0.60 >More info 0.22 >More info 0h wt Original data
490 9m.KNO3 0.23 >More info 0.58 >More info To. KNO3 14 day old Roots Original data GEO bulk
491 Dark 4 h pls RedLight 1min -0.29 >More info -0.51 >More info Dark 4 h Original data Light treatments
492 E.orontii Infection 3 day 0.18 >More info 0.62 >More info Uninfection 3 day Original data Elicitor treatments
493 agb1 gpa1 +ABA GC -0.27 >More info -0.53 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
494 Stem tissue 2 days NAA 0.15 >More info 0.65 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
495 JA 3h 0.17 >More info 0.63 >More info EtOH 3h 3hr Original data GEO bulk
496 til1-1 22C 0.21 >More info 0.59 >More info Col-0 22C Original data GEO bulk
497 WT NAA 2h -0.23 >More info -0.57 >More info WT 0h Leaf tissue Original data GEO bulk
498 FAMA induced 48h 0.55 >More info 0.24 >More info control 48h Whole seedling Original data GEO bulk
499 RGA-GR-DEX 0.19 >More info 0.60 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
500 Chitin 0.27 >More info 0.52 >More info Col C Original data GEO bulk
501 agb1 gpa1 -ABA GC -0.22 >More info -0.56 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
502 Starch sheath 5 days MS incubation 0.24 >More info 0.54 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
503 WT leaves - Fe 0.23 >More info 0.55 >More info WT leaves + Fe Leaves Original data GEO bulk
504 myb3 myb3r4d 0.26 >More info 0.52 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
505 WT Red light 18h -0.26 >More info -0.52 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
506 4C 24h 0.28 >More info 0.50 >More info 4C 0h Original data GEO bulk
507 tumour 0.24 >More info 0.54 >More info non-tumor tumour Original data GEO bulk
508 Wt-BA-sample 0.27 >More info 0.51 >More info Wt-dmso-sample seedling Original data
509 Emwa1 inoculated psk 3 dpi -0.50 >More info -0.27 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
510 Got7 UV 0.26 >More info 0.51 >More info Got7 mock UV seedling Original data
511 Protoplast Induced 0.19 >More info 0.58 >More info Uninduced Original data GEO bulk
512 SA 24h 0.23 >More info 0.54 >More info EtOH 24h 24hr Original data GEO bulk
513 aox1a:rpoTmp untreated 0.22 >More info 0.55 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
514 Leaf -0.52 >More info -0.24 >More info Control for tissue data leaf Original data GEO bulk
515 WT cotyledons -0.51 >More info -0.25 >More info Control for tissue data cotyledons Original data
516 IAA7mII over-expressor IAA Treated 0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
517 tmm1-inflorescence-tips 0.24 >More info 0.52 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
518 tt4 -0.25 >More info -0.51 >More info WT aerial region Original data GEO bulk
519 cat2-long-day 2d -0.52 >More info -0.23 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
520 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.55 >More info -0.20 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
521 hira-root -0.25 >More info -0.50 >More info WT-root root Original data
522 TA induced 0.20 >More info 0.54 >More info Methanol TA Suspension cells Original data GEO bulk
523 IXB induced 0.19 >More info 0.55 >More info Methanol IXB Suspension cells Original data GEO bulk
524 15m.KCl 0.18 >More info 0.56 >More info To. KCl 14 day old Roots Original data GEO bulk
525 Col in Pi deficiency medium 0.12 >More info 0.61 >More info Col in control medium root Original data GEO bulk
526 Anoxia 0.22 >More info 0.51 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
527 atmyc2 Seedling BL -0.07 >More info -0.66 >More info WT Seedling BL Original data GEO bulk
528 Col-0 2HS 0.21 >More info 0.52 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
529 HairpinZ 4 h (leaf) 0.75 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
530 SA Treated 0.63 >More info 0.08 >More info Water Original data GEO bulk
531 12h-DC3000 avrRpm1 0.17 >More info 0.53 >More info 12h-DC3000 leaves Original data GEO bulk
532 Leaf wounded 0.11 >More info 0.59 >More info Leaf control vegetative leaf Original data GEO bulk
533 CeO2 germinant -0.12 >More info -0.58 >More info Millipore Water germinant CeO2 seedling Original data
534 nas4x leaves + Fe 0.14 >More info 0.55 >More info WT leaves + Fe Leaves Original data GEO bulk
535 vte2 leaves 120h LT 0.64 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
536 siliques AtHb1 control 0.16 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
537 shoot-10 μM DEX- 6 hr 0.17 >More info 0.51 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
538 light -0.50 >More info -0.18 >More info dark light seedling Original data GEO bulk
539 agb1 gpa1 +ABA LF -0.18 >More info -0.50 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
540 Col PSTDC3000 24h 0.80 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
541 afb3-1 2h KNO3 -0.16 >More info -0.51 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
542 oligomycin 1 h 0.11 >More info 0.56 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
543 Mh0 UV -0.61 >More info -0.05 >More info Mh0 mock UV seedling Original data
544 red illumination +lincomycin 0.16 >More info 0.50 >More info red illumination -lincomycin Original data GEO bulk
545 flu dark 8hours/30 minute light 0.06 >More info 0.60 >More info col dark 8hours/30 minute light Original data GEO bulk
546 miR PSTDC3000 24h -0.59 >More info -0.05 >More info Col PSTDC3000 24h Leaf Original data GEO bulk
547 wnk8-1 untreated -0.13 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
548 msh1 recA3 untreated 0.09 >More info 0.55 >More info WT untreated above-ground parts Original data GEO bulk
549 FLIGHT TAGESB plate6 ROOTS 0.07 >More info 0.57 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
550 sid2-2 safener -0.13 >More info -0.50 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
551 2hr continuous KNO3 ECR cell 0.12 >More info 0.51 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
552 P. infestans 6 h (leaf) 0.76 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
553 Col-0 24hpi A. brassicicola 0.59 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
554 pvip1 pvip2 seedling 0.63 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
555 Dex-rga(delta17) 4h GA4 -0.08 >More info -0.50 >More info Vector 4h GA4 shoots Original data GEO bulk
556 glk1 glk2 GLK1-GR +DEX 4h -0.03 >More info -0.52 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
557 phyABCDE 4-day dark- 2 hours Rc50 0.03 >More info 0.52 >More info phyABCDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
558 12m.KCl 0.02 >More info 0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
559 2hr transitory KNO3 ECR cell -0.01 >More info 0.52 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
560 amiRAP aerobic 0.12 >More info -0.62 >More info WT aerobic aerobic Original data GEO bulk
561 seed germinating in countinuous light 24h SL -0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
562 bri1-116 -0.24 >More info 0.73 >More info Col seedling Original data GEO bulk
563 penta Flg22 1h 0.53 >More info -0.05 >More info Laer Flg22 1h leaf discs Original data GEO bulk
564 HARAP aerobic 0.03 >More info -0.51 >More info WT aerobic aerobic Original data GEO bulk
565 CCA1-ox 6am non-polysomal -0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
566 ein2 0.58 >More info -0.12 >More info Col-0 Leaves Original data GEO bulk
567 bak1-3 +Pep2 2h -0.07 >More info 0.52 >More info WT +Pep2 2h Pep2 Original data GEO bulk
568 TaFLS overexpression line (OE1) -0.07 >More info 0.52 >More info Col-0 Rosette leaves Original data
569 Shoot apex inflorescence (after bolting) -0.28 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
570 Light 3day hml -0.61 >More info 0.37 >More info 0h hml Original data