4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on myb3 myb3r4d
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List of experiments correlated with "myb3 myb3r4d"  Help Download transcriptome of top 30
Score Experiment Correlation from
myb3 myb3r4d		 Correlation to
myb3 myb3r4d		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 myb3 myb3r4d 1.00 >More info 1.00 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
2 ceh1 mutant 0.75 >More info 0.77 >More info Parent line Original data
3 Elevated CO2 AMPLE N DAY 0.80 >More info 0.72 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
4 sid2-1 cold -0.70 >More info -0.75 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
5 pepr1-1 Pepr2-3 +Pep2 10h -0.82 >More info -0.61 >More info WT +Pep2 10h Pep2 Original data GEO bulk
6 edr1 18 h powdery mildew 0.77 >More info 0.64 >More info Col-0 18 h powdery mildew Original data GEO bulk
7 sni1 0.70 >More info 0.71 >More info WT Original data GEO bulk
8 CMV-WT 0.72 >More info 0.67 >More info Mock-At Aerial tissues Original data GEO bulk
9 edr1 36 h powdery mildew 0.82 >More info 0.56 >More info Col-0 36 h powdery mildew Original data GEO bulk
10 del1-1 mutant 5d uninfected 0.66 >More info 0.71 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
11 dense canopy 0.74 >More info 0.62 >More info single (control) petiole Original data GEO bulk
12 sfr6 drought -0.68 >More info -0.67 >More info WT drought All aerial tissue Original data GEO bulk
13 Col ozone 2d 0.75 >More info 0.60 >More info Col clean-air 2d ozone Original data GEO bulk
14 shoots bhlh100/101 0uM Fe 0.80 >More info 0.54 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
15 rcf1-1 cold 24h 0.75 >More info 0.59 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
16 ERF96OE 0.71 >More info 0.63 >More info WT leaf Original data
17 pepr1-1 Pepr2-3 +Pep2 2h -0.72 >More info -0.61 >More info WT +Pep2 2h Pep2 Original data GEO bulk
18 seedlings-week-old RECA1-overexpressing
transgenic		 0.74 >More info 0.58 >More info seedlings-week-old Col-0 seedlings Original data
19 Col-0 INA 48h 0.65 >More info 0.66 >More info Col-0 MOCK 48h Original data GEO bulk
20 rosette leaves fdh 0.75 >More info 0.56 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
21 UV Stress 24 h (shoot) 0.61 >More info 0.70 >More info Stress mock 24 h (shoot) Original data Stress treatments
22 IMI 4mM 0.74 >More info 0.57 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
23 smg7b-1 0.66 >More info 0.64 >More info WT whole plant Original data GEO bulk
24 DFPM 0.77 >More info 0.53 >More info control Original data GEO bulk
25 Col0-PsmES4326-24hpi 0.69 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
26 GST 4 h (leaf) 0.69 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
27 CLO 4mM 0.74 >More info 0.55 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
28 opr3 JA 2 h 0.68 >More info 0.61 >More info opr3 0 h Original data GEO bulk
29 SA 4mM 0.79 >More info 0.50 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
30 cpr5scv1 0.72 >More info 0.56 >More info WT(COL) Original data GEO bulk
31 cpr5 0.66 >More info 0.62 >More info WT(COL) Original data GEO bulk
32 ABA JA 24h 0.58 >More info 0.70 >More info EtOH 24h 24hr Original data GEO bulk
33 GO5; 0h switch to ambient CO2 concentrations; -0.68 >More info -0.59 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
34 Col-0 9 hpi A. brassicicola 0.65 >More info 0.62 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
35 rcf1-1 cold 12h 0.78 >More info 0.49 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
36 Ba1 UV 0.50 >More info 0.76 >More info Ba1 mock UV seedling Original data
37 8h-DC3000 avrRpm1 0.81 >More info 0.45 >More info 8h-DC3000 leaves Original data GEO bulk
38 Elevated CO2 fully expanded leaf 0.72 >More info 0.53 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
39 Elevated CO2 AMPLE N NIGHT 0.52 >More info 0.73 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
40 ein2-1 9 hpi A. brassicicola 0.64 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
41 pnp1-1 1wk +P 0.71 >More info 0.54 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
42 bHLH122 ox -0.56 >More info -0.69 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
43 P.syringae AvrRpt2 4 h (leaf) 0.61 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
44 B.cinerea 18 h infection 0.56 >More info 0.68 >More info Mock 18 h Original data Botrytis cinerea infection
45 Botrytis cinerea 18h 0.56 >More info 0.68 >More info control 18h Original data GEO bulk
46 HARAP aerobic -0.65 >More info -0.59 >More info WT aerobic aerobic Original data GEO bulk
47 A. thaliana-A. lyrata hybrid -0.64 >More info -0.60 >More info A. thaliana mature leaves before flowering Original data GEO bulk
48 gh3.5D uninoculated -0.61 >More info -0.63 >More info Col-0 48 hpi Original data GEO bulk
49 Col-0-avrB-6h 0.59 >More info 0.65 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
50 Leafminer damaged seedlings 0.67 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
51 Col whole leaf 5dpi 0.60 >More info 0.63 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
52 OE WRKY63.3 high light 0.60 >More info 0.63 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
53 WT-NOCO2 INFECTED 0.69 >More info 0.53 >More info WT-MOCK Original data GEO bulk
54 bZIP1ko mutant N+Light- 0.60 >More info 0.62 >More info WT-sib N+Light- whole plant Original data GEO bulk
55 P.p 6hai 0.71 >More info 0.50 >More info At-Control roots Original data GEO bulk
56 20d after anthesis 0.70 >More info 0.51 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
57 Col whole leaf 7dpi 0.64 >More info 0.57 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
58 efr-1 +elf18 10h -0.72 >More info -0.49 >More info WT +elf18 10h elf18 Original data GEO bulk
59 6h +Pi -0.75 >More info -0.46 >More info 6h -Pi root Original data GEO bulk
60 P.p 10.5hai 0.65 >More info 0.55 >More info At-Control roots Original data GEO bulk
61 Pst-DC3000(avrRpm1)-4hpi 0.64 >More info 0.56 >More info Pst-DC3000-4hpi Original data GEO bulk
62 P.p 2.5hai 0.70 >More info 0.50 >More info At-Control roots Original data GEO bulk
63 IRP1-OE-Ctrl--root 0.76 >More info 0.44 >More info COL-0-Ctrl--root root Original data
64 Leafminer locally damaged thaliana seedlings 0.67 >More info 0.52 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
65 downy mildew cotyledons late stage 0.58 >More info 0.61 >More info mock inoculated Cotyledons Original data GEO bulk
66 HopZ1a treated ulp1c ulp1d 0.63 >More info 0.56 >More info col Original data GEO bulk
67 JA 24h 0.57 >More info 0.62 >More info EtOH 24h 24hr Original data GEO bulk
68 HopZ1a treated 0.62 >More info 0.57 >More info col Original data GEO bulk
69 Chitosan 3h Treatment 0.60 >More info 0.59 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
70 tga1 tga4 2h KCl 0.50 >More info 0.68 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
71 del1-1 5dpi 0.57 >More info 0.61 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
72 low CO2 + light 0.59 >More info 0.59 >More info normal CO2 + light Original data GEO bulk
73 BLM+INA 0.75 >More info 0.43 >More info CK BLM and INA seedling Original data
74 Elevated CO2 expanding leaf 0.83 >More info 0.35 >More info Ambient CO2 expanding leaf expanding leaf Original data
75 rcf1-1 cold 0h 0.82 >More info 0.36 >More info WT cold 0h Control seedlings Original data GEO bulk
76 DC3000 24h 0.69 >More info 0.49 >More info Mock 24h DC3000 Original data GEO bulk
77 Phaseolicola 2 h (leaf) 0.62 >More info 0.55 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
78 WT +elf18 2h 0.63 >More info 0.54 >More info WT untreated elf18 Original data GEO bulk
79 WT Bc inoculation 14h 0.70 >More info 0.47 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
80 WT AntimycinA 3h 0.67 >More info 0.50 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
81 leaf blade in D 0.57 >More info 0.60 >More info leaf blade in WL leaf blades Original data GEO bulk
82 20m.KCl 0.43 >More info 0.74 >More info To. KCl 14 day old Roots Original data GEO bulk
83 bak1-3 +Pep2 10h 0.64 >More info 0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
84 R. solani AG2-1 0.65 >More info 0.51 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
85 SA 3h 0.66 >More info 0.50 >More info EtOH 3h 3hr Original data GEO bulk
86 shoot-10 μM DEX- 6 hr 0.56 >More info 0.60 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
87 P.p 30hai 0.67 >More info 0.49 >More info At-Control roots Original data GEO bulk
88 IRP1-OE-Fe--root 0.71 >More info 0.45 >More info COL-0-Fe--root root Original data
89 anac017-2 AntimycinA 3h -0.70 >More info -0.46 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
90 pvip1 pvip2 0.69 >More info 0.47 >More info Col-0 whole rosettes Original data GEO bulk
91 bri1-116 0.43 >More info 0.73 >More info Col seedling Original data GEO bulk
92 spx1 spx2 complete 0.69 >More info 0.46 >More info WT complete seedlings Original data
93 abi4-102 (II) 0.55 >More info 0.60 >More info Col (II) rosette Original data GEO bulk
94 Time-0 chr11-1chr17-1 -0.64 >More info -0.51 >More info Time-0 Col-0 leaf explants Original data
95 ice1 6H Cold 0.68 >More info 0.46 >More info WT 6H Cold Original data GEO bulk
96 SCR-GR Time 1H Dex 0.60 >More info 0.54 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
97 Leafminer systemically damaged thaliana seedlings 0.68 >More info 0.46 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
98 CMV-A2b mutant 0.71 >More info 0.43 >More info Mock-At Aerial tissues Original data GEO bulk
99 coi1-16 ein2 sid2 ctrl -0.69 >More info -0.45 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
100 pmr5 pmr6 0.53 >More info 0.60 >More info Col-0 Original data GEO bulk
101 WT +Pep2 2h 0.78 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
102 35S:RPS4 eds1-2 8h -0.61 >More info -0.52 >More info 35S:RPS4 8h leaves Original data
103 Salt Stress 24 h (root) 0.71 >More info 0.42 >More info Stress mock 24 h (root) Original data Stress treatments
104 Col ozone 3h 0.35 >More info 0.78 >More info Col clean-air 3h ozone Original data GEO bulk
105 camta3-2 0.54 >More info 0.58 >More info WT Original data GEO bulk
106 anac017-1 H2O2 3h -0.55 >More info -0.57 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
107 phr1 Root-Pi 0.67 >More info 0.45 >More info WT Root+Pi roots Original data GEO bulk
108 ataf1-1 mutant Col-0 Bgh inoculated 0.55 >More info 0.57 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
109 ice1 control 0.70 >More info 0.42 >More info WT control Original data GEO bulk
110 Leaf wounded 0.65 >More info 0.46 >More info Leaf control vegetative leaf Original data GEO bulk
111 WT drought 0.60 >More info 0.51 >More info WT control All aerial tissue Original data GEO bulk
112 ice1 24H Cold 0.64 >More info 0.47 >More info WT 24H Cold Original data GEO bulk
113 GST NPP1 4 h (leaf) 0.53 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
114 Pto inoculated 0.61 >More info 0.50 >More info col Original data GEO bulk
115 root Dosed gold 0.70 >More info 0.41 >More info root No gold .125 mM gold 24 h roots Original data
116 0.125 mM gold 24 h 0.70 >More info 0.41 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
117 Mock pft1 leaf 0.49 >More info 0.62 >More info Mock Col-0 leaf water leaf Original data GEO bulk
118 cs26 short-day -0.50 >More info -0.60 >More info Leaves-WT-SD leaf Original data GEO bulk
119 Col-0 INA 6d 0.55 >More info 0.55 >More info Col-0 MOCK 6d Original data GEO bulk
120 WT-SA 0.62 >More info 0.48 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
121 RPL18 TuMV inoculated total RNA 0.71 >More info 0.39 >More info mock inoculated total RNA PO Original data GEO bulk
122 Shoot -K 0.51 >More info 0.59 >More info Control-shoot Original data GEO bulk
123 K starvation (shoot) 0.51 >More info 0.59 >More info Ws (shoot) Original data GEO bulk
124 WT 2-4h Xanthomonas 0.44 >More info 0.66 >More info WT T0 Original data GEO bulk
125 35S:RPS4 eds1-2 24h -0.65 >More info -0.44 >More info 35S:RPS4 24h leaves Original data
126 Botrytis cinerea 48h 0.64 >More info 0.45 >More info control 48h Original data GEO bulk
127 pmr5 0.43 >More info 0.66 >More info Col-0 Original data GEO bulk
128 petiole in D 0.58 >More info 0.51 >More info petiole in WL petioles Original data GEO bulk
129 8hr-pH4.5 0.60 >More info 0.48 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
130 flu 0.52 >More info 0.56 >More info WT Col Original data GEO bulk
131 SLWF infested 0.61 >More info 0.47 >More info SLWF uninfested rosette tissue Original data GEO bulk
132 des1.1 0.49 >More info 0.59 >More info Leaves-WT leaf Original data GEO bulk
133 atmyc2 cop1 Seedling BL 0.67 >More info 0.40 >More info WT Seedling BL Original data GEO bulk
134 ARR22-ox (t-zeatin 3 h) 0.73 >More info 0.34 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
135 vtc2 mature somatic embryo 0.44 >More info 0.63 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
136 cat2-hCO2 -0.72 >More info -0.35 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
137 dorn1-1 Root 100 mM ATP 30 min -0.56 >More info -0.50 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
138 Fenclorim 4hr 0.67 >More info 0.39 >More info Acetone 4hr root Original data GEO bulk
139 Col-0 C2H4 24h 0.63 >More info 0.43 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
140 flu over-tAPX 0.50 >More info 0.56 >More info WT Col Original data GEO bulk
141 Methyl Jasmonate 1 h 0.47 >More info 0.59 >More info Mock 1 h Original data Basic hormone treatment of seedlings
142 CAX1/CAX3 mutant 0.49 >More info 0.57 >More info Col whole plant Original data GEO bulk
143 +1.6 mM Tween 20 1 h. 0.44 >More info 0.62 >More info +distilled water 1 h. Original data GEO bulk
144 A6 mutant 0.53 >More info 0.52 >More info WT rosette leaves Rosette leaves Original data GEO bulk
145 msh1 albino 0.60 >More info 0.45 >More info WT aerial part Original data GEO bulk
146 plant (Col-0) 4h OPDA 0.65 >More info 0.40 >More info plant (Col-0) 4h control Original data GEO bulk
147 OPDA 4 h 0.65 >More info 0.40 >More info Col-0 Original data GEO bulk
148 phyB mutant 22C 10hrs -0.42 >More info -0.63 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
149 bio4-1 mutant leaves 0.33 >More info 0.72 >More info WT leaves leaves Original data GEO bulk
150 upf1 0.66 >More info 0.38 >More info WT whole plant Original data GEO bulk
151 ice1 3H Cold 0.64 >More info 0.40 >More info WT 3H Cold Original data GEO bulk
152 OE-HRA1 2HS  0.62 >More info 0.42 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
153 Col in Pi deficiency medium 0.50 >More info 0.54 >More info Col in control medium root Original data GEO bulk
154 vtc2 (I) 0.58 >More info 0.46 >More info Col (I) rosette Original data GEO bulk
155 CMP 24hr 0.68 >More info 0.36 >More info Acetone 24hr root Original data GEO bulk
156 mkk1/mkk2 24h BTH rep 0.55 >More info 0.49 >More info Col-0 24h BTH rep Original data GEO bulk
157 toc1-1-65hr 0.61 >More info 0.42 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
158 Col-0 under 4 days salt 0.71 >More info 0.32 >More info Col-0 under control 4 days salt treatment rosette Original data
159 pnp1-1 3h +P 0.65 >More info 0.38 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
160 apk1 apk2 0.68 >More info 0.35 >More info Col0-control whole rosette Original data GEO bulk
161 Sulfometuron EC50 0.66 >More info 0.37 >More info Carrier Original data GEO bulk
162 mkk1/mkk2 control rep 0.43 >More info 0.60 >More info Col-0 Time 0 rep Original data GEO bulk
163 DC3000 2 h (leaf) 0.56 >More info 0.46 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
164 Mutant siz1-3 (Drought) 0.50 >More info 0.52 >More info Col-0 (Drought) Original data GEO bulk
165 vtc1 (II) 0.51 >More info 0.51 >More info Col (II) rosette Original data GEO bulk
166 ABA SA 24h 0.62 >More info 0.40 >More info EtOH 24h 24hr Original data GEO bulk
167 siz1-3 drought 0.50 >More info 0.52 >More info Col-0 drought Original data GEO bulk
168 Col-Luc WT 3h antimycin A 0.58 >More info 0.44 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
169 Got7 UV 0.47 >More info 0.55 >More info Got7 mock UV seedling Original data
170 oas-a1.1 Cd 18h 0.40 >More info 0.62 >More info Cd 18h root Root Original data GEO bulk
171 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.63 >More info 0.38 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
172 cov1 cov2 stem Base 0.66 >More info 0.35 >More info WT stem Base stem Base Original data GEO bulk
173 overexpresser LBD38 in -N -0.73 >More info -0.28 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
174 seedlings protease IV 0.51 >More info 0.50 >More info seedlings nontreated control whole seedling Original data
175 Leaf systemic 0.69 >More info 0.32 >More info Leaf control vegetative leaf Original data GEO bulk
176 aox1a:rpoTmp untreated 0.64 >More info 0.37 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
177 Col-0 ozone 0.63 >More info 0.38 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
178 root control pSHR -0.67 >More info -0.34 >More info root control total control root Original data GEO bulk
179 R. solani AG8 0.64 >More info 0.37 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
180 leaf blade in FRD 0.58 >More info 0.43 >More info leaf blade in WL leaf blades Original data GEO bulk
181 cpr5 0.47 >More info 0.54 >More info WT seedling Original data GEO bulk
182 cpr5npr1svi1 0.43 >More info 0.58 >More info WT(COL) Original data GEO bulk
183 Col BTH 0.34 >More info 0.67 >More info Col rosettes Original data GEO bulk
184 35S:RPS4 eds1-2 2h -0.48 >More info -0.53 >More info 35S:RPS4 2h leaves Original data
185 eds16 whole leaf 6hpi -0.69 >More info -0.31 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
186 gh3.5-1D 48 hpi 0.55 >More info 0.45 >More info Col-0 uninoculated Original data GEO bulk
187 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.63 >More info 0.37 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
188 Mutant siz1-3 0.47 >More info 0.53 >More info Col-0 Original data GEO bulk
189 bio4-1 mutant watered00µM biotin leaves -0.23 >More info -0.77 >More info bio4-1 mutant leaves leaves Original data GEO bulk
190 siz1-3 control 0.47 >More info 0.53 >More info Col-0 control Original data GEO bulk
191 coi1-2 0.52 >More info 0.47 >More info Col-0 mock Whole seedling Original data GEO bulk
192 M6PR transgenic 0mM NaCl 0.51 >More info 0.48 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
193 Cor hrpS 10h 0.51 >More info 0.48 >More info Mock 10h Cor hrpS Original data GEO bulk
194 nia1nia2 0.63 >More info 0.36 >More info Col-0 whole seedlings Original data GEO bulk
195 WT Col-0 Bgh inoculated 0.44 >More info 0.55 >More info WT Col-0 Un-inoculated Original data GEO bulk
196 eds16 whole leaf 5dpi -0.45 >More info -0.54 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
197 edr1 0 h powdery mildew 0.48 >More info 0.51 >More info Col-0 0 h powdery mildew Original data GEO bulk
198 cpr5npr1 0.46 >More info 0.53 >More info WT(COL) Original data GEO bulk
199 Col whole leaf 5 dpi 0.58 >More info 0.40 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
200 2hr transitory KNO3 PrR cell 0.53 >More info 0.45 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
201 LTN008-2 aza-dc 0.63 >More info 0.35 >More info LTN012-2 Mock Original data
202 roottip hypoxia pSHR -0.45 >More info -0.53 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
203 JA 3h 0.30 >More info 0.68 >More info EtOH 3h 3hr Original data GEO bulk
204 aba3-1 0.41 >More info 0.57 >More info wt Original data GEO bulk
205 shoot-10 μM DEX- 12 hr 0.35 >More info 0.63 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
206 WT H2O2 3h 0.58 >More info 0.39 >More info WT water 3h 3h_H2O2 Original data GEO bulk
207 GST-overexpression seedlings control 0.58 >More info 0.39 >More info WT seedlings control Seedlings Original data
208 Lipopolysaccaride4 h (leaf) 0.44 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
209 Mutant coi1(leaf) -0.42 >More info -0.55 >More info Col-0 (leaf) Original data GEO bulk
210 camta1/3 warm 0.43 >More info 0.54 >More info WT warm entire aerial part Original data GEO bulk
211 WT +Pep2 10h 0.68 >More info 0.28 >More info WT untreated Pep2 Original data GEO bulk
212 wrky33 Bc inoculation 14h 0.57 >More info 0.39 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
213 CT101 ozone 0.59 >More info 0.37 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
214 cat2-long-day 2d -0.57 >More info -0.39 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
215 Prohexadione 12 h 0.54 >More info 0.42 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
216 PAHs stress 0.53 >More info 0.43 >More info exp control phenanthrene whole plants Original data GEO bulk
217 RPL18 TuMV inoculated polysomal RNA 0.67 >More info 0.28 >More info mock inoculated polysomal RNA PO Original data GEO bulk
218 WT in -N 0.73 >More info 0.22 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
219 Te ozone 0.53 >More info 0.42 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
220 hrpA fliC 7h 0.60 >More info 0.35 >More info Mock 7h hrpA fliC Original data GEO bulk
221 col-5 hrpA 12h 0.51 >More info 0.44 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
222 upf3 0.57 >More info 0.38 >More info WT whole plant Original data GEO bulk
223 vtc2 day 7 induction -0.54 >More info -0.41 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
224 Mutant ga1-5 -0.53 >More info -0.42 >More info Ler-1 Original data Comparison of plant hormone related mutant
225 current injection 0.41 >More info 0.54 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
226 35S:CDO1 normoxia 0.43 >More info 0.52 >More info WT normoxia normoxia whole rosette Original data
227 roots bhlh100/101 0uM Fe 0.55 >More info 0.39 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
228 JA 0.55 >More info 0.39 >More info Col-0 mock Whole seedling Original data GEO bulk
229 plant (tga2-5-6) 4h control 0.62 >More info 0.32 >More info plant (Col-0) 4h control Original data GEO bulk
230 Mutant tga2_5_6 0.62 >More info 0.32 >More info Col-0 Original data GEO bulk
231 hrpA 7h 0.59 >More info 0.35 >More info Mock 7h hrpA Original data GEO bulk
232 ABA 24h 0.60 >More info 0.34 >More info EtOH 24h 24hr Original data GEO bulk
233 Col whole leaf 1dpi -0.51 >More info -0.43 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
234 G3P 0.50 >More info 0.44 >More info Mock distal leaves Original data GEO bulk
235 gpa1-4/agb1-2 ozone 2d -0.36 >More info -0.58 >More info Col ozone 2d ozone Original data GEO bulk
236 pnp1-1 3h -P 0.55 >More info 0.38 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
237 root - 08% oxygen - 2h -0.15 >More info -0.78 >More info root - 21% oxygen - 2h Original data GEO bulk
238 sav1-1 light 0.50 >More info 0.43 >More info Col-0 light seedlings Original data GEO bulk
239 hog1-7 -0.63 >More info -0.30 >More info wt whole seedling Original data GEO bulk
240 DUO1 induced 12h -0.62 >More info -0.31 >More info 12hr-not-induced whole plant Original data GEO bulk
241 K starvation (root) 0.62 >More info 0.31 >More info Ws (root) Original data GEO bulk
242 col-5 DC3000 12h 0.52 >More info 0.41 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
243 prmt5-5 -0.59 >More info -0.34 >More info WT Col continuous light Aerial tissue Original data GEO bulk
244 mutant-line774 -0.63 >More info -0.30 >More info WT-control whole plant Original data GEO bulk
245 1 h Light Total RNA -0.24 >More info -0.69 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
246 opr3 JA 0.5 h 0.20 >More info 0.73 >More info opr3 0 h Original data GEO bulk
247 opr3 JA 8 h 0.66 >More info 0.26 >More info opr3 0 h Original data GEO bulk
248 abi4 vtc2 (I) 0.54 >More info 0.38 >More info Col (I) rosette Original data GEO bulk
249 eds16 whole leaf 0h UI -0.37 >More info -0.55 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
250 shoot-10 μM DEX- 24hr 0.36 >More info 0.56 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
251 toc1-1-49hr 0.61 >More info 0.31 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
252 Mutant ap2-6(flower) -0.72 >More info -0.20 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
253 Mutant arf2-6 (IAA) -0.51 >More info -0.41 >More info Col (IAA) Original data GEO bulk
254 Root -K 0.62 >More info 0.30 >More info Control-root Original data GEO bulk
255 root callus inducing medium 48 h -0.71 >More info -0.21 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
256 35S::ERF104 Flg22 4h 0.51 >More info 0.41 >More info 35S::ERF104 H2O 4h Original data GEO bulk
257 Laer pretreat GA Flg22 1h 0.21 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
258 WT+chitooctaose 0.35 >More info 0.57 >More info WT+water chitooctaose seedlings Original data GEO bulk
259 Shoot -Cs 0.41 >More info 0.51 >More info Control-shoot Original data GEO bulk
260 npr1-1 SA -0.56 >More info -0.35 >More info Col-0 SA complete seedling Original data
261 Mutant cry1 (High Light) -0.64 >More info -0.27 >More info Col-0 (High Light) Original data GEO bulk
262 WT Seedling BL+ABA 0.78 >More info 0.13 >More info WT Seedling BL Original data GEO bulk
263 Cocultivation 8 hrs root 0.64 >More info 0.27 >More info Mock cocultivation 8 hrs root Root Original data
264 cry1 high light -0.64 >More info -0.27 >More info Col-O high light Original data GEO bulk
265 AvrRpm1 2 h (leaf) 0.40 >More info 0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
266 ein5-1 ski2-3 0.62 >More info 0.29 >More info Col-0 aerial tissue Original data
267 Triazolopyrimidine EC50 0.58 >More info 0.33 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
268 Tsu -Fe 24h Shoots 0.57 >More info 0.34 >More info Tsu +Fe 24h Shoots Original data GEO bulk
269 dark +H2O2 -0.41 >More info -0.50 >More info dark 5 mM H2O2 seedling Original data GEO bulk
270 plant (tga2-5-6) 4h OPDA 0.62 >More info 0.28 >More info plant (tga2-5-6) 4h control Original data GEO bulk
271 UV Stress 24 h (root) 0.54 >More info 0.36 >More info Stress mock 24 h (root) Original data Stress treatments
272 Col whole leaf amplified 5 dpi 0.53 >More info 0.37 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
273 cs26 long day 0.23 >More info 0.67 >More info Leaves-WT-LD leaf Original data GEO bulk
274 SHR-GR Time 1H Dex 0.60 >More info 0.30 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
275 OE-HRA1 NS  0.60 >More info 0.30 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
276 Col-0 DCA 48h 0.31 >More info 0.59 >More info Col-0 MOCK 48h Original data GEO bulk
277 WT resupplied Pi 4h 0.55 >More info 0.34 >More info WT complete seedlings Original data
278 Constans-mutant 0.50 >More info 0.39 >More info Col control above-ground whole plant Original data GEO bulk
279 bZIP1ko mutant N+Light+ 0.51 >More info 0.38 >More info WT-sib N+Light+ whole plant Original data GEO bulk
280 mbd6 mutant thaliana 10-day-old seedling 0.64 >More info 0.25 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
281 Shoot P recovery 0.73 >More info 0.16 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
282 WT 30μM arsenate 8 hours. 0.66 >More info 0.23 >More info WT control (not supplemented). Original data
283 ABA DFPM 0.64 >More info 0.25 >More info control Original data GEO bulk
284 Uniconazole 12 h 0.64 >More info 0.25 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
285 sid2 -0.35 >More info -0.54 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
286 vte2-1 3d vernalization 0.38 >More info 0.51 >More info WT 3d vernalization Original data GEO bulk
287 Dex-rga(delta17) 4h GA4+DEX -0.58 >More info -0.31 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
288 Nicotinamide-53hr 0.55 >More info 0.33 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
289 21h-DC3000 hrpA -0.32 >More info -0.56 >More info 21h-DC3000 leaves Original data GEO bulk
290 GiantCell Root -0.34 >More info -0.54 >More info Control Root laser captured giant cells Original data GEO bulk
291 Osmotic Stress 24 h (shoot) 0.64 >More info 0.24 >More info Stress mock 24 h (shoot) Original data Stress treatments
292 ataf1-1 mutant Col-0 Un-inoculated -0.50 >More info -0.38 >More info WT Col-0 Un-inoculated Original data GEO bulk
293 long 14-degree- 0.52 >More info 0.36 >More info control long Original data GEO bulk
294 cop1 Seedling BL 0.63 >More info 0.25 >More info WT Seedling BL Original data GEO bulk
295 expressing C2 MeJA -0.37 >More info -0.51 >More info LUC2T Original data GEO bulk
296 coi1-16 ein2 sid2 ozone 0.57 >More info 0.31 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
297 gun4-1 0.53 >More info 0.34 >More info WT Col-0 seedling Original data GEO bulk
298 root callus inducing medium 96 h -0.67 >More info -0.20 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
299 mbd4 mutant thaliana 10-day-old seedling 0.74 >More info 0.13 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
300 spch 0.59 >More info 0.28 >More info Col-0 WT whole seedling Original data GEO bulk
301 Glyphosate EC50 0.64 >More info 0.23 >More info Carrier (Glyphosate) Original data GEO bulk
302 WT Shoot-Pi 0.65 >More info 0.22 >More info WT Shoot+Pi shoots Original data GEO bulk
303 tor mutant glucose 0.60 >More info 0.27 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
304 AtGATA2ox 0.61 >More info 0.26 >More info Col seedling Original data GEO bulk
305 FLIGHT TAGES 2B plate6 HYPOCOTYLS 0.62 >More info 0.25 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
306 Seedling-control POLYSOMESmRNA 0.25 >More info 0.62 >More info Seedling-control TOTALmRNA seedling Original data
307 Roots Cd -0.53 >More info -0.33 >More info Roots control Cd Root Original data GEO bulk
308 naxillin 6h 0.55 >More info 0.31 >More info before treatment naxillin root Original data GEO bulk
309 IXB induced 0.31 >More info 0.55 >More info Methanol IXB Suspension cells Original data GEO bulk
310 rsa3-1 Na 24h 0.20 >More info 0.66 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
311 35:SUB1A 0.59 >More info 0.27 >More info WT whole seedling Original data GEO bulk
312 E.orontii Infection 3 day 0.27 >More info 0.59 >More info Uninfection 3 day Original data Elicitor treatments
313 root - 04% oxygen - 2h -0.03 >More info -0.83 >More info root - 21% oxygen - 2h Original data GEO bulk
314 12h-DC3000 avrRpm1 0.57 >More info 0.29 >More info 12h-DC3000 leaves Original data GEO bulk
315 Primisulfuron EC50 0.56 >More info 0.29 >More info Carrier (primisulfuron) Original data GEO bulk
316 hsfa2 KO -0.60 >More info -0.25 >More info WT (Col-0) whole seedling Original data GEO bulk
317 4d red light grown hmr-5 seedlings 0.57 >More info 0.28 >More info 4d red light grown WT(Col-0) seedlings Original data
318 S15-118 0.26 >More info 0.59 >More info wt Original data GEO bulk
319 35:SUB1C 0.52 >More info 0.32 >More info WT whole seedling Original data GEO bulk
320 petiole in FRD 0.50 >More info 0.34 >More info petiole in WL petioles Original data GEO bulk
321 root stele 40 mM NaCls 0.53 >More info 0.31 >More info root stele Original data GEO bulk
322 root longitudinal zone-2 -Fe 0.53 >More info 0.31 >More info root longitudinal zone-2 standard Original data GEO bulk
323 Root wt CLE10 0.51 >More info 0.33 >More info Root wt CLE25 root tip Original data GEO bulk
324 Seedling-HeatStressed TOTALmRNA 0.56 >More info 0.28 >More info Seedling-control TOTALmRNA seedling Original data
325 Nicotinamide-57hr 0.51 >More info 0.33 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
326 S58-2 0.30 >More info 0.54 >More info wt Original data GEO bulk
327 root cells cortex -Fe 0.58 >More info 0.26 >More info whole roots standard Original data GEO bulk
328 smg5-2 0.63 >More info 0.21 >More info WT whole plant Original data GEO bulk
329 dor control 0.60 >More info 0.24 >More info WT control Original data GEO bulk
330 agb1 gpa1 -ABA LF 0.25 >More info 0.59 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
331 8 hr ammonium 0.64 >More info 0.19 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
332 Osmotic Stress 24 h (root) 0.66 >More info 0.17 >More info Stress mock 24 h (root) Original data Stress treatments
333 Tsu -Fe 48h Shoots 0.56 >More info 0.27 >More info Tsu +Fe 24h Shoots Original data GEO bulk
334 IAA7mII over-expressor IAA Treated 0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
335 shoot control pCER5 0.64 >More info 0.18 >More info shoot control total Original data GEO bulk
336 til1-1 22C 0.55 >More info 0.27 >More info Col-0 22C Original data GEO bulk
337 seedling mSPL13 -0.63 >More info -0.19 >More info seedling Col-0 Original data GEO bulk
338 oligomycin 1 h 0.30 >More info 0.52 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
339 anti-sense for AtAOX1a 0.21 >More info 0.61 >More info WT Original data GEO bulk
340 WT powdery mildew 0.23 >More info 0.59 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
341 irradiated leaf (cmt 1d) 0.62 >More info 0.19 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
342 pho1 0.51 >More info 0.30 >More info Col2WT Original data GEO bulk
343 dde2-2 9 hpi A. brassicicola 0.50 >More info 0.31 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
344 Col leaves 48h LT 0.56 >More info 0.25 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
345 hira-root -0.54 >More info -0.27 >More info WT-root root Original data
346 rpoTmp(line) MLD stressed 0.67 >More info 0.14 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
347 8-DAC chr11-1chr17-1 0.50 >More info 0.31 >More info 8-DAC Col-0 leaf explants Original data
348 PRR5-VP 18h light on -0.56 >More info -0.25 >More info WT 18h light on whole plant Original data GEO bulk
349 Cold Stress 24 h (root) 0.59 >More info 0.22 >More info Stress mock 24 h (root) Original data Stress treatments
350 shoot hypoxia pCER5 0.56 >More info 0.24 >More info shoot hypoxia total Original data GEO bulk
351 1.5 hr ammonium 0.52 >More info 0.28 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
352 aba2 1% sucrose 12-day-old 0.50 >More info 0.30 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
353 root - 01% oxygen - 30min -0.26 >More info -0.54 >More info root - 21% oxygen - 30min Original data GEO bulk
354 Elevated CO2 LIMITING N DAY -0.19 >More info -0.61 >More info Elevated CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
355 BLM 0.67 >More info 0.12 >More info CK BLM seedling Original data
356 ein3 eil1 0.51 >More info 0.28 >More info Col-0 mock Whole seedling Original data GEO bulk
357 bam7 untreated -0.51 >More info -0.28 >More info WT untreated none shoot Original data
358 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.53 >More info -0.26 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
359 TA induced 0.26 >More info 0.53 >More info Methanol TA Suspension cells Original data GEO bulk
360 FLIGHT TAGESB plate6 ROOTS 0.26 >More info 0.53 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
361 root callus inducing medium 24h -0.58 >More info -0.21 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
362 HRE1-RNAi20 normoxia -0.22 >More info -0.57 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
363 AvrRpt2 Col-0 6hpi 0.52 >More info 0.26 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
364 overexpresser LBD37 in -N -0.63 >More info -0.15 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
365 GR:KAN1 DEX WL 0.50 >More info 0.28 >More info GR:KAN1 Mock WL seedlings Original data
366 naxillin 3h 0.53 >More info 0.25 >More info before treatment naxillin root Original data GEO bulk
367 tZ -0.53 >More info -0.25 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
368 sim smr1 -0.51 >More info -0.27 >More info WT seedling Original data GEO bulk
369 root - 04% oxygen - 48h -0.09 >More info -0.69 >More info root - 21% oxygen - 48h Original data GEO bulk
370 des1 water 0.51 >More info 0.26 >More info WT water water leaf Original data GEO bulk
371 ISOXABEN -0.53 >More info -0.24 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
372 S82-2 -0.52 >More info -0.25 >More info wt Original data GEO bulk
373 TNT-seedlings 0.60 >More info 0.17 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
374 root control pWOL -0.60 >More info -0.17 >More info root control total control root Original data GEO bulk
375 ORS1 induced 0.27 >More info 0.50 >More info mock-induced rosette leaves Original data GEO bulk
376 coi1 -0.25 >More info -0.52 >More info Col-0 Leaves Original data GEO bulk
377 seedling 24h after HZE WT 0.63 >More info 0.13 >More info seedling day 2 unirradiated WT 24h Original data
378 Dex-rga(delta17) 2h GA4+DEX -0.53 >More info -0.23 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
379 Myzus persicae saliva 0.66 >More info 0.10 >More info Control Original data GEO bulk
380 aphid saliva treated 0.66 >More info 0.10 >More info control aphid saliva treated leaves Original data GEO bulk
381 Col-0 24hpi A. brassicicola 0.74 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
382 mkk2 24h BTH rep 0.25 >More info 0.51 >More info Col-0 24h BTH rep Original data GEO bulk
383 Heat and anoxia 0.53 >More info 0.22 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
384 root longitudinal zone-1 pH 4.6 0.67 >More info 0.08 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
385 gir root 4%glc 0.56 >More info 0.19 >More info Col-7 root 4%glc root Original data GEO bulk
386 Col-0-3h IAA 0.51 >More info 0.24 >More info Col-0-0h IAA whole plant Original data GEO bulk
387 AAF-OX 0.55 >More info 0.20 >More info Col-0 Rosette leaf Original data GEO bulk
388 P.syringae vir 4 h (leaf) 0.58 >More info 0.17 >More info Mock 4 h (leaf) Original data Elicitor treatments
389 Methyl Jasmonate 0.5 h 0.25 >More info 0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
390 UV 0.55 >More info 0.19 >More info WT aerial region Original data GEO bulk
391 Seedling-HeatStressed POLYSOMESmRNA 0.50 >More info 0.24 >More info Seedling-control POLYSOMESmRNA seedling Original data
392 SHR-GR Time 6H Dex -0.54 >More info -0.20 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
393 C24 UV1 -0.53 >More info -0.21 >More info C24 mock UV seedling Original data
394 Bay-0-30min IAA 0.56 >More info 0.17 >More info Bay-0-0h IAA whole plant Original data GEO bulk
395 opr3 OPDA 22 h 0.58 >More info 0.15 >More info opr3 0 h Original data GEO bulk
396 Rsch CA -0.50 >More info -0.23 >More info Col CA Leaves Original data
397 Whole root - low pH 12H 0.50 >More info 0.23 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
398 IPT8 induced 12h 0.50 >More info 0.23 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
399 erf104-ko Flg22 4h 0.22 >More info 0.51 >More info erf104-ko H2O 4h Original data GEO bulk
400 siliques AtHb1 control 0.21 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
401 3x(m) -0.05 >More info 0.78 >More info 2x two week old seedlings Original data
402 Mh0 UV -0.58 >More info -0.14 >More info Mh0 mock UV seedling Original data
403 oas-a1.1 Cd 24h 0.59 >More info 0.13 >More info Cd 24h root Shoot Original data GEO bulk
404 WT (Ler) TSA 0.52 >More info 0.20 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and 100 ng/ml TSA. tissue culture Original data GEO bulk
405 WT 1wk -P 0.70 >More info 0.02 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
406 irradiated leaf (WT 1d) 0.58 >More info 0.13 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
407 axr2-BR -0.58 >More info -0.13 >More info BR BR dark-grown seedlings Original data GEO bulk
408 embryo proper heart stage -0.59 >More info -0.12 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
409 agb1 -ABA LF 0.14 >More info 0.57 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
410 ulp1c ulp1d 0.20 >More info 0.51 >More info col Original data GEO bulk
411 P-chlorophenoxy- isobutyric acid 3 h 0.12 >More info 0.58 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
412 46T-CK 0.18 >More info 0.52 >More info WT-CK none Original data
413 aerial organ callus inducing medium 12 h 0.53 >More info 0.16 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
414 Root submergence 7h 0.52 >More info 0.17 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
415 opr3 JA 22 h 0.56 >More info 0.13 >More info opr3 0 h Original data GEO bulk
416 LTN005-2 TSA -0.19 >More info -0.50 >More info LTN012-2 Mock Original data
417 seedlings +5AC 0.52 >More info 0.16 >More info control seedlings 10-day old whole seedling Original data GEO bulk
418 KAN1-GR 60min 0.54 >More info 0.14 >More info KAN1-GR 0min Original data GEO bulk
419 OE WRKY40.4 -0.51 >More info -0.17 >More info OE WRKY40.4 none leaf Original data GEO bulk
420 WT (Col-0) inflorescence drought day 5 0.58 >More info 0.10 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
421 wavy 0.09 >More info 0.59 >More info WT Original data GEO bulk
422 8 hr nitrate 0.55 >More info 0.12 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
423 Ws leaf 100mM NaCl 0.15 >More info 0.52 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
424 vtc1-1 -0.12 >More info -0.55 >More info Col-0 whole plant Original data GEO bulk
425 Ws 100mM NaCl 0.15 >More info 0.52 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
426 Whole root - low pH 6H 0.61 >More info 0.06 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
427 stn7-1 -0.57 >More info -0.10 >More info Col-0 rosette leaves Original data GEO bulk
428 Methyl Jasmonate 3 h 0.10 >More info 0.57 >More info Mock 3 h Original data Basic hormone treatment of seedlings
429 Dark 6h ivd 0.56 >More info 0.10 >More info 0h ivd Original data
430 toc1-1-53hr 0.61 >More info 0.05 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
431 root - 08% oxygen - 48h -0.10 >More info -0.56 >More info root - 21% oxygen - 48h Original data GEO bulk
432 OsSAP11 expressing -0.15 >More info -0.51 >More info WT seedlings Original data GEO bulk
433 Root submergence 24h 0.58 >More info 0.08 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
434 upb1-1 elongation zone 0.50 >More info 0.15 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
435 HS -0.54 >More info -0.11 >More info noneHS Original data GEO bulk
436 flu dark 8hours/30 minute light 0.10 >More info 0.55 >More info col dark 8hours/30 minute light Original data GEO bulk
437 Infected pft1 leaf 0.10 >More info 0.55 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
438 Imidazolinone EC50 0.59 >More info 0.06 >More info Carrier (Imidazolinone) Original data GEO bulk
439 whole roots 140 mM NaCl 1 hour 0.56 >More info 0.08 >More info whole roots standard Original data GEO bulk
440 NaCl Col 0.50 >More info 0.14 >More info Col Original data GEO bulk
441 seedling 1.5h after HZE atm-1 0.52 >More info 0.12 >More info seedling day 1 unirradiated atm-1 1.5h Original data
442 miR 0h 0.62 >More info 0.02 >More info Col 0h Leaf Original data GEO bulk
443 embryo proper -0.56 >More info -0.07 >More info Control for tissue data Original data GEO bulk
444 P35S:rGRF1 -0.51 >More info -0.12 >More info Col-0 Original data GEO bulk
445 roottip hypoxia pSCR -0.10 >More info -0.53 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
446 seedling 6h after Gamma atm-1 0.65 >More info -0.03 >More info seedling day 1 unirradiated atm-1 6h Original data
447 seedling 3h after Gamma WT 0.52 >More info 0.10 >More info seedling day 1 unirradiated WT 3h Original data
448 Root dark control 24h 0.52 >More info 0.10 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
449 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.54 >More info 0.08 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
450 cov1 cov2 stem Top -0.51 >More info -0.11 >More info WT stem Top stem Top Original data GEO bulk
451 shoot hypoxia p35S 0.11 >More info 0.51 >More info shoot hypoxia total Original data GEO bulk
452 CCA1-ox 6am non-polysomal 0.10 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
453 whole seeds -0.58 >More info -0.02 >More info Control for tissue data Original data GEO bulk
454 WT Root-Pi 0.58 >More info 0.02 >More info WT Root+Pi roots Original data GEO bulk
455 abi1 hypocotyl 0.04 >More info 0.55 >More info Ler hypocotyl hypocotyl Original data GEO bulk
456 3x(p) -0.04 >More info 0.63 >More info 2x two week old seedlings Original data
457 xyl-grown cell culture- 1h 1mM Fru -0.04 >More info -0.54 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
458 eto1-4 0.54 >More info 0.03 >More info Col-0 whole seedling Original data GEO bulk
459 eds16 whole leaf 7d UI -0.05 >More info -0.52 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
460 Dry pre-dawn 0.05 >More info -0.62 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
461 tfl1-1-23ºC 0.50 >More info 0.06 >More info WT-23ºC Original data GEO bulk
462 peripherial endosperm -0.53 >More info -0.03 >More info Control for tissue data Original data GEO bulk
463 Polysomal RNA 35S:HF-RPL18 cold 0.53 >More info 0.03 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
464 Apex mir-319b 17DAS 0.51 >More info 0.05 >More info Apex Col 14DAS Original data GEO bulk
465 root cells stele 140mM NaCl 3 hours 0.52 >More info 0.04 >More info root cells stele standard 1 hour root cells stele Original data
466 AFB1 0h 0.54 >More info 0.01 >More info Col 0h Leaf Original data GEO bulk
467 Col -Fe 0.54 >More info 0.01 >More info Col-es root Original data GEO bulk
468 35S::HRE1 Hypoxic 0.01 >More info -0.56 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
469 Col-0 WT HL 3h 0.50 >More info 0.04 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
470 vte2 leaves 120h LT 0.50 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
471 whole seeds mature green -0.53 >More info -0.01 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
472 Ambient CO2 leaf primordia -0.60 >More info 0.07 >More info Control for tissue data leaf primordia Original data
473 SOS1 100mM NaCl 0.52 >More info 0.01 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
474 toc1-1-77hr 0.61 >More info -0.08 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
475 Transgenic LEC2GR Seedling 1h Dex 0.52 >More info -0.00 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
476 cdpk6-yfp 0.52 >More info -0.00 >More info Kan seedlings Original data GEO bulk
477 MYB29 OE -0.52 >More info 0.00 >More info WT for MYB29/76 Original data GEO bulk
478 Col PSTDC3000 24h 0.64 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
479 peripheral endosperm heart stage -0.50 >More info -0.01 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
480 COL-0-Fe--root 0.50 >More info 0.01 >More info COL-0-Ctrl--root root Original data
481 E2Fa-Dpa 0.66 >More info -0.16 >More info WT Original data GEO bulk
482 prors1-2 leaves 0.67 >More info -0.17 >More info Col-0 leaves leaves Original data
483 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.56 >More info -0.07 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
484 Col upon hypoxia 6 hrs 0.50 >More info -0.01 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
485 35S::Zat12+H2O2 0.50 >More info -0.01 >More info WT+H2O2 H2O2 Original data GEO bulk
486 pif4pif5 mut 1h FR -0.52 >More info 0.05 >More info WT 1h FR Original data GEO bulk
487 pif3 Dark 1h -0.59 >More info 0.12 >More info WT Dark 1h etiolated seedling Original data GEO bulk
488 P. infestans 6 h (leaf) 0.62 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
489 HairpinZ 4 h (leaf) 0.50 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
490 Flower (stage12) -0.50 >More info 0.03 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
491 etr1 1% sucrose 12-day-old 0.50 >More info -0.04 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
492 1h +Pi 0.06 >More info -0.51 >More info 1h -Pi root Original data GEO bulk
493 Heat shock optimum -0.21 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
494 root cells columella root cap -Fe 0.50 >More info -0.06 >More info whole roots standard Original data GEO bulk
495 pkl-1 0.51 >More info -0.07 >More info WT whole seedling Original data GEO bulk
496 seedling 6h after HZE atm-1 0.55 >More info -0.12 >More info seedling day 1 unirradiated atm-1 6h Original data
497 WT (Col-0) inflorescence drought day 10 0.51 >More info -0.09 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
498 WT cold 12 h 0.54 >More info -0.12 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
499 shoot control pSUC2 0.51 >More info -0.09 >More info shoot control total Original data GEO bulk
500 camta1 leaf drought -0.10 >More info 0.52 >More info Col-0 leaf drought leaf Original data GEO bulk
501 Apex 5DAS -0.53 >More info 0.12 >More info Control for tissue data Original data GEO bulk
502 Oxidative Stress 3 h (root) 0.10 >More info -0.51 >More info Stress mock 3 h (root) Original data Stress treatments
503 abh1 -ABA 0.57 >More info -0.16 >More info Col-0 -ABA Original data GEO bulk
504 ckh2 CK25 0.55 >More info -0.15 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
505 seed germinating in countinuous light 24h SL -0.27 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
506 WT Shoot Hypoxia 0.21 >More info -0.61 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
507 pepr1-1 Pepr2-3 untreated 0.11 >More info -0.51 >More info WT untreated untreated Original data GEO bulk
508 ADD3 -0.50 >More info 0.12 >More info WT aerial part Original data GEO bulk
509 WT(Ler) Rc15 -0.51 >More info 0.14 >More info WT(Ler) Dark Original data GEO bulk
510 seed germinating in countinuous light 48 h SL -0.51 >More info 0.14 >More info Control for tissue data seed Original data GEO bulk
511 atmyc2 Seedling BL 0.30 >More info -0.66 >More info WT Seedling BL Original data GEO bulk
512 WT Root Hypoxia 0.19 >More info -0.54 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
513 root - 08% oxygen - 30min 0.36 >More info -0.67 >More info root - 21% oxygen - 30min Original data GEO bulk
514 gpa1 +ABA LF 0.21 >More info -0.51 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
515 T101A 10mM NH4NO3 0.53 >More info -0.26 >More info col 10mM NH4NO3 Root Original data
516 24h volatiles Sm. R3089 -0.50 >More info 0.28 >More info 24h untreated whole seedling Original data GEO bulk
517 MPK6 ox Shoot Hypoxia 0.34 >More info -0.55 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
518 Shoot apex inflorescence (after bolting) -0.50 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
519 root - 01% oxygen - 2h 0.42 >More info -0.53 >More info root - 21% oxygen - 2h Original data GEO bulk
520 Aerobic e1 ate2 0.58 >More info -0.69 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
521 Aerobic prt6 0.54 >More info -0.53 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk