4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Leafminer locally damaged thaliana seedlings
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Score Experiment Correlation from
Leafminer locally damaged thaliana seedlings		 Correlation to
Leafminer locally damaged thaliana seedlings		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Leafminer locally damaged thaliana seedlings 1.00 >More info 1.00 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
2 Leafminer systemically damaged thaliana seedlings 0.82 >More info 0.86 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
3 leaf13 0.76 >More info 0.83 >More info unwounded leaves none Original data GEO bulk
4 HopZ1a treated ulp1c ulp1d 0.76 >More info 0.82 >More info col Original data GEO bulk
5 Pst-DC3000(avrRpm1)-4hpi 0.74 >More info 0.83 >More info Pst-DC3000-4hpi Original data GEO bulk
6 Leafminer damaged seedlings 1.00 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
7 DC3000 24h 0.76 >More info 0.80 >More info Mock 24h DC3000 Original data GEO bulk
8 Pto inoculated 0.76 >More info 0.79 >More info col Original data GEO bulk
9 HopZ1a treated 0.74 >More info 0.81 >More info col Original data GEO bulk
10 Botrytis cinerea 48h 0.75 >More info 0.79 >More info control 48h Original data GEO bulk
11 gh3.5-1D 48 hpi 0.75 >More info 0.78 >More info Col-0 uninoculated Original data GEO bulk
12 col-5 DC3000 12h 0.75 >More info 0.78 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
13 ulp1c ulp1d +Pto 0.72 >More info 0.79 >More info ulp1c ulp1d mock Original data GEO bulk
14 col-5 hrpA 12h 0.72 >More info 0.79 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
15 flu over-tAPX 0.77 >More info 0.74 >More info WT Col Original data GEO bulk
16 cpr5scv1 0.75 >More info 0.75 >More info WT(COL) Original data GEO bulk
17 Col-0-avrB-6h 0.71 >More info 0.79 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
18 flu 0.76 >More info 0.73 >More info WT Col Original data GEO bulk
19 rosette Light Wounded 0.70 >More info 0.79 >More info rosette Light Control Original data GEO bulk
20 hrcC 0.70 >More info 0.78 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
21 Mutant gh3.5-1D (AvrRpt2) 0.70 >More info 0.78 >More info Col-0 (AvrRpt2) Original data GEO bulk
22 pepr1-1 Pepr2-3 +Pep2 2h -0.70 >More info -0.78 >More info WT +Pep2 2h Pep2 Original data GEO bulk
23 B.cinerea 18 h infection 0.72 >More info 0.76 >More info Mock 18 h Original data Botrytis cinerea infection
24 Botrytis cinerea 18h 0.72 >More info 0.76 >More info control 18h Original data GEO bulk
25 rosette Dark Wounded 0.69 >More info 0.78 >More info rosette Dark Control Original data GEO bulk
26 Flagellin 4 h (leaf) 0.69 >More info 0.78 >More info Mock 4 h (leaf) Original data Elicitor treatments
27 ice1 control 0.63 >More info 0.83 >More info WT control Original data GEO bulk
28 DC3000 7h 0.70 >More info 0.76 >More info Mock 7h DC3000 Original data GEO bulk
29 GST NPP1 4 h (leaf) 0.68 >More info 0.78 >More info Mock 4 h (leaf) Original data Elicitor treatments
30 ceh1 mutant 0.74 >More info 0.72 >More info Parent line Original data
31 Methyl Jasmonate 1 h 0.68 >More info 0.78 >More info Mock 1 h Original data Basic hormone treatment of seedlings
32 Col-0 9 hpi A. brassicicola 0.70 >More info 0.75 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
33 cpr5npr1svi1 0.70 >More info 0.75 >More info WT(COL) Original data GEO bulk
34 treated group 0.64 >More info 0.80 >More info Control group Original data
35 ein2-1 9 hpi A. brassicicola 0.72 >More info 0.72 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
36 Col-0 under 4 days salt 0.68 >More info 0.75 >More info Col-0 under control 4 days salt treatment rosette Original data
37 Elevated CO2 AMPLE N DAY 0.66 >More info 0.77 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
38 Col-0 flu HL 3h 0.74 >More info 0.69 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
39 hrpA fliC 7h 0.70 >More info 0.73 >More info Mock 7h hrpA fliC Original data GEO bulk
40 ERF96OE 0.69 >More info 0.74 >More info WT leaf Original data
41 Chitosan 3h Treatment 0.74 >More info 0.69 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
42 rosette leaves fdh 0.70 >More info 0.72 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
43 hrpA 7h 0.65 >More info 0.77 >More info Mock 7h hrpA Original data GEO bulk
44 Phaseolicola 2 h (leaf) 0.63 >More info 0.78 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
45 CMV-A2b mutant 0.68 >More info 0.73 >More info Mock-At Aerial tissues Original data GEO bulk
46 ataf1-1 mutant Col-0 Bgh inoculated 0.66 >More info 0.75 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
47 WT Col-0 Bgh inoculated 0.66 >More info 0.75 >More info WT Col-0 Un-inoculated Original data GEO bulk
48 del1-1 mutant 5d uninfected 0.67 >More info 0.73 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
49 IRP1-OE-Fe--shoot 0.68 >More info 0.72 >More info COL-0-Fe--shoot shoot Original data
50 WT AntimycinA 3h 0.69 >More info 0.71 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
51 CMP 24hr 0.67 >More info 0.72 >More info Acetone 24hr root Original data GEO bulk
52 +1.6 mM Tween 20 1 h. 0.57 >More info 0.82 >More info +distilled water 1 h. Original data GEO bulk
53 dor drought 0.61 >More info 0.77 >More info WT drought Original data GEO bulk
54 bHLH122 ox -0.62 >More info -0.76 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
55 8h-DC3000 avrRpm1 0.68 >More info 0.70 >More info 8h-DC3000 leaves Original data GEO bulk
56 Osmotic Stress 24 h (shoot) 0.67 >More info 0.70 >More info Stress mock 24 h (shoot) Original data Stress treatments
57 35S:RPS4 eds1-2 24h -0.68 >More info -0.69 >More info 35S:RPS4 24h leaves Original data
58 mpk6-ko Flg22 4h 0.61 >More info 0.76 >More info mpk6-ko H2O 4h Original data GEO bulk
59 Col0-PsmES4326-24hpi 0.76 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
60 sid2-2 9 hpi A. brassicicola 0.70 >More info 0.67 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
61 seedlings protease IV 0.65 >More info 0.71 >More info seedlings nontreated control whole seedling Original data
62 Dark 3day ivd 0.71 >More info 0.65 >More info 0h ivd Original data
63 current injection 0.54 >More info 0.82 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
64 Shoot -K 0.67 >More info 0.69 >More info Control-shoot Original data GEO bulk
65 K starvation (shoot) 0.67 >More info 0.69 >More info Ws (shoot) Original data GEO bulk
66 aerial organ callus inducing medium 12 h 0.61 >More info 0.74 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
67 CMV-WT 0.66 >More info 0.69 >More info Mock-At Aerial tissues Original data GEO bulk
68 Fenclorim 4hr 0.64 >More info 0.71 >More info Acetone 4hr root Original data GEO bulk
69 AgNO3 3 h 0.64 >More info 0.71 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
70 GST 4 h (leaf) 0.56 >More info 0.79 >More info Mock 4 h (leaf) Original data Elicitor treatments
71 Atss3 Light4 -0.70 >More info -0.64 >More info Atss3 Dark0.5 Original data GEO bulk
72 Ws 100mM NaCl 0.61 >More info 0.73 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
73 cpr5npr1 0.61 >More info 0.73 >More info WT(COL) Original data GEO bulk
74 Ws leaf 100mM NaCl 0.61 >More info 0.73 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
75 Mutant coi1(leaf) -0.61 >More info -0.73 >More info Col-0 (leaf) Original data GEO bulk
76 WT-NOCO2 INFECTED 0.63 >More info 0.71 >More info WT-MOCK Original data GEO bulk
77 Cor hrpS 10h 0.61 >More info 0.73 >More info Mock 10h Cor hrpS Original data GEO bulk
78 coi1-16 ein2 sid2 ctrl -0.71 >More info -0.63 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
79 Methyl Jasmonate 3 h 0.62 >More info 0.71 >More info Mock 3 h Original data Basic hormone treatment of seedlings
80 WT Bc inoculation 14h 0.68 >More info 0.65 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
81 ice1 6H Cold 0.54 >More info 0.79 >More info WT 6H Cold Original data GEO bulk
82 anac017-2 AntimycinA 3h -0.63 >More info -0.70 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
83 rosette leaves lcr 0.62 >More info 0.71 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
84 Lipopolysaccaride4 h (leaf) 0.66 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
85 penta Alternaria 3dpi 0.67 >More info 0.65 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
86 WT +elf18 2h 0.62 >More info 0.70 >More info WT untreated elf18 Original data GEO bulk
87 fls1-3 0.59 >More info 0.73 >More info Col-0 Rosette leaves Original data
88 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.72 >More info 0.59 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
89 Col-0 48 hpi 0.61 >More info 0.70 >More info Col-0 uninoculated Original data GEO bulk
90 Col-0 ozone 0.72 >More info 0.59 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
91 DFPM 0.60 >More info 0.71 >More info control Original data GEO bulk
92 IMI 4mM 0.64 >More info 0.67 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
93 coi1-PsmES4326-24hpi -0.58 >More info -0.73 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
94 bak1-3 +Pep2 10h 0.62 >More info 0.68 >More info WT +Pep2 10h Pep2 Original data GEO bulk
95 WT +elf18 10h 0.65 >More info 0.65 >More info WT untreated elf18 Original data GEO bulk
96 Dark 6h ivd 0.68 >More info 0.62 >More info 0h ivd Original data
97 Cor 10h 0.64 >More info 0.66 >More info Mock 10h Cor Original data GEO bulk
98 SLWF infested 0.62 >More info 0.68 >More info SLWF uninfested rosette tissue Original data GEO bulk
99 AvrRpt2 Col-0 6hpi 0.69 >More info 0.61 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
100 rcf1-1 cold 24h 0.61 >More info 0.69 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
101 Cold Stress 24 h (shoot) 0.61 >More info 0.69 >More info Stress mock 24 h (shoot) Original data Stress treatments
102 Seedling KUA1-IOX est 0.56 >More info 0.73 >More info Seedling KUA1-IOX mock Original data
103 cpr5 0.60 >More info 0.69 >More info WT(COL) Original data GEO bulk
104 Rsch 8h 0.54 >More info 0.75 >More info Rsch CA Leaves Original data
105 21h-DC3000 hrpA -0.61 >More info -0.68 >More info 21h-DC3000 leaves Original data GEO bulk
106 edr1 18 h powdery mildew 0.64 >More info 0.65 >More info Col-0 18 h powdery mildew Original data GEO bulk
107 plant (Col-0) 4h OPDA 0.66 >More info 0.62 >More info plant (Col-0) 4h control Original data GEO bulk
108 atmospheric CO2 high Mg shoot 0.73 >More info 0.55 >More info atmospheric CO2 normal Mg shoot Shoot Original data
109 DC3000 2 h (leaf) 0.53 >More info 0.75 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
110 vtc2 (I) 0.61 >More info 0.67 >More info Col (I) rosette Original data GEO bulk
111 Te ozone 0.68 >More info 0.60 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
112 OPDA 4 h 0.66 >More info 0.62 >More info Col-0 Original data GEO bulk
113 35S::ERF104 Flg22 4h 0.56 >More info 0.72 >More info 35S::ERF104 H2O 4h Original data GEO bulk
114 Sulfometuron EC50 0.66 >More info 0.62 >More info Carrier Original data GEO bulk
115 wt systemic wounding 0.65 >More info 0.63 >More info wt control leaves Original data GEO bulk
116 nhx6 0.70 >More info 0.58 >More info WT Rosette leaf Original data GEO bulk
117 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.70 >More info 0.58 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
118 Col whole leaf 5dpi 0.58 >More info 0.70 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
119 Wounding Stress3 h (shoot) 0.59 >More info 0.69 >More info Stress mock 3 h (shoot) Original data Stress treatments
120 S58-2 0.61 >More info 0.66 >More info wt Original data GEO bulk
121 CMP 4hr 0.60 >More info 0.67 >More info Acetone 4hr root Original data GEO bulk
122 Methyl Jasmonate 0.5 h 0.52 >More info 0.75 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
123 erf104-ko Flg22 4h 0.53 >More info 0.74 >More info erf104-ko H2O 4h Original data GEO bulk
124 mkk1/mkk2 24h BTH rep 0.63 >More info 0.64 >More info Col-0 24h BTH rep Original data GEO bulk
125 wavy 0.62 >More info 0.64 >More info WT Original data GEO bulk
126 Atss3 Light1 -0.63 >More info -0.63 >More info Atss3 Dark0.5 Original data GEO bulk
127 toc1-1-49hr 0.64 >More info 0.62 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
128 JA 0.58 >More info 0.68 >More info Col-0 mock Whole seedling Original data GEO bulk
129 coronatine 0.71 >More info 0.55 >More info control rosette leaves Original data
130 abi4 vtc2 (I) 0.61 >More info 0.65 >More info Col (I) rosette Original data GEO bulk
131 Col whole leaf 7dpi 0.57 >More info 0.69 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
132 Shoot -Cs 0.51 >More info 0.74 >More info Control-shoot Original data GEO bulk
133 Atss3 Dark8 -0.56 >More info -0.69 >More info Atss3 Dark0.5 Original data GEO bulk
134 Laer Flg22 2h 0.58 >More info 0.67 >More info Laer Control leaf discs Original data GEO bulk
135 35S:RPS4 eds1-2 8h -0.60 >More info -0.65 >More info 35S:RPS4 8h leaves Original data
136 camta1-2 0.50 >More info 0.74 >More info Col-0-WT Original data GEO bulk
137 Col-0 drought 0.63 >More info 0.61 >More info Col-0 control Original data GEO bulk
138 Col-Luc WT 3h antimycin A 0.61 >More info 0.63 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
139 npr1-1 SA -0.63 >More info -0.60 >More info Col-0 SA complete seedling Original data
140 RRE2 Chitin 0.59 >More info 0.64 >More info Chitin Original data GEO bulk
141 Elevated CO2 AMPLE N NIGHT 0.51 >More info 0.72 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
142 pmr5 pmr6 0.59 >More info 0.64 >More info Col-0 Original data GEO bulk
143 toc1-1-77hr 0.72 >More info 0.51 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
144 nhx5-1/nhx6 0.59 >More info 0.64 >More info WT Rosette leaf Original data GEO bulk
145 Mature callus 0.61 >More info 0.62 >More info Young callus hypocotyls Original data GEO bulk
146 efr-1 +elf18 10h -0.56 >More info -0.67 >More info WT +elf18 10h elf18 Original data GEO bulk
147 aerial organ callus inducing medium 48 h 0.60 >More info 0.63 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
148 SOS1 0mM NaCl 0.66 >More info 0.56 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
149 ABA DFPM 0.56 >More info 0.66 >More info control Original data GEO bulk
150 sid2-1 cold -0.57 >More info -0.65 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
151 aerial organ callus inducing medium 24h 0.59 >More info 0.63 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
152 bZIP1ko mutant N+Light- 0.52 >More info 0.70 >More info WT-sib N+Light- whole plant Original data GEO bulk
153 4d red light grown hmr-5 seedlings 0.58 >More info 0.64 >More info 4d red light grown WT(Col-0) seedlings Original data
154 WT 6H Cold 0.49 >More info 0.73 >More info WT control Original data GEO bulk
155 CLO 4mM 0.55 >More info 0.66 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
156 Fenclorim 24hr 0.57 >More info 0.64 >More info Acetone 24hr root Original data GEO bulk
157 Col-0 +ABA LF 0.54 >More info 0.67 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
158 WT resupplied Pi 4h 0.65 >More info 0.56 >More info WT complete seedlings Original data
159 WT 3H Cold 0.43 >More info 0.78 >More info WT control Original data GEO bulk
160 plant (tga2-5-6) 4h OPDA 0.67 >More info 0.53 >More info plant (tga2-5-6) 4h control Original data GEO bulk
161 A. thaliana-A. lyrata hybrid -0.55 >More info -0.65 >More info A. thaliana mature leaves before flowering Original data GEO bulk
162 WT no Pi 0.65 >More info 0.55 >More info WT complete seedlings Original data
163 Heat shock optimum 0.55 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
164 leaf blade in D 0.52 >More info 0.68 >More info leaf blade in WL leaf blades Original data GEO bulk
165 aerial organ callus inducing medium 96 h 0.56 >More info 0.64 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
166 ARR22-ox (t-zeatin 3 h) 0.66 >More info 0.54 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
167 Laer pretreat GA+JA Flg22 0h 0.60 >More info 0.60 >More info Laer pretreat water control leaf discs Original data GEO bulk
168 E.coli 0157 H7 7h 0.51 >More info 0.69 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
169 Cycloheximide 3 h 0.58 >More info 0.62 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
170 21h-DC3000 avrRpm1 -0.62 >More info -0.58 >More info 21h-DC3000 leaves Original data GEO bulk
171 ein5-1 ski2-3 0.61 >More info 0.58 >More info Col-0 aerial tissue Original data
172 miR393 flg22 2h 0.51 >More info 0.68 >More info WT 0h Leaf tissue Original data GEO bulk
173 seedling 1.5h after HZE atm-1 0.57 >More info 0.62 >More info seedling day 1 unirradiated atm-1 1.5h Original data
174 Dark 2day hml 0.64 >More info 0.55 >More info 0h hml Original data
175 pvip1 pvip2 0.56 >More info 0.63 >More info Col-0 whole rosettes Original data GEO bulk
176 myb3 myb3r4d 0.52 >More info 0.67 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
177 Laer pretreat JA Flg22 2h 0.61 >More info 0.58 >More info Laer pretreat water control leaf discs Original data GEO bulk
178 Laer pretreat GA Flg22 1h 0.48 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
179 WT 2-4h Xanthomonas 0.45 >More info 0.74 >More info WT T0 Original data GEO bulk
180 E.coli TUV86 2 fliC 7h 0.52 >More info 0.66 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
181 Glyphosate EC50 0.53 >More info 0.65 >More info Carrier (Glyphosate) Original data GEO bulk
182 P.syringae AvrRpt2 4 h (leaf) 0.64 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
183 oas-a1.1 Cd 24h 0.57 >More info 0.61 >More info Cd 24h root Shoot Original data GEO bulk
184 Laer Flg22+GA 2h 0.57 >More info 0.61 >More info Laer Control leaf discs Original data GEO bulk
185 Drought Stress 24 h (shoot) 0.61 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
186 Col 1d 0.57 >More info 0.61 >More info Col CA Leaves Original data
187 Laer treat paclobutrazol (PAC) 0.60 >More info 0.58 >More info Laer Control leaf discs Original data GEO bulk
188 WT flg22 2h 0.59 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
189 ASL9-ox -0.57 >More info -0.61 >More info WT aerial parts of seedlings Original data GEO bulk
190 Col ozone 2d 0.49 >More info 0.69 >More info Col clean-air 2d ozone Original data GEO bulk
191 Laer Flg22 1h 0.56 >More info 0.61 >More info Laer Control leaf discs Original data GEO bulk
192 oligomycin 4 h 0.58 >More info 0.59 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
193 CT101 ozone 0.65 >More info 0.52 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
194 chito-octamer 0.54 >More info 0.63 >More info Col Mock Original data GEO bulk
195 M6PR transgenic 0mM NaCl 0.60 >More info 0.57 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
196 smg7b-1 0.58 >More info 0.59 >More info WT whole plant Original data GEO bulk
197 pnp1-1 1wk +P 0.62 >More info 0.55 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
198 Laer Flg22+GA 1h 0.57 >More info 0.60 >More info Laer Control leaf discs Original data GEO bulk
199 pmr5 0.53 >More info 0.64 >More info Col-0 Original data GEO bulk
200 ced1 -0.55 >More info -0.62 >More info WT PEG 6hr seedlings Original data GEO bulk
201 Col-0 Flg22 4h 0.47 >More info 0.70 >More info Col-0 H2O 4h Original data GEO bulk
202 oas-a1.1 Cd 18h 0.45 >More info 0.72 >More info Cd 18h root Root Original data GEO bulk
203 Laer pretreat JA Flg22 1h 0.60 >More info 0.56 >More info Laer pretreat water control leaf discs Original data GEO bulk
204 ice1 24H Cold 0.51 >More info 0.65 >More info WT 24H Cold Original data GEO bulk
205 low CO2 + light 0.51 >More info 0.65 >More info normal CO2 + light Original data GEO bulk
206 WT-SA 0.56 >More info 0.60 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
207 WT 24H Cold 0.54 >More info 0.62 >More info WT control Original data GEO bulk
208 edr1 36 h powdery mildew 0.55 >More info 0.61 >More info Col-0 36 h powdery mildew Original data GEO bulk
209 petiole in D 0.56 >More info 0.60 >More info petiole in WL petioles Original data GEO bulk
210 anac017-2 H2O2 3h -0.65 >More info -0.51 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
211 toc1-1-53hr 0.67 >More info 0.49 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
212 upf3 0.57 >More info 0.59 >More info WT whole plant Original data GEO bulk
213 msh1 albino 0.53 >More info 0.62 >More info WT aerial part Original data GEO bulk
214 8h-DC3000 hrpA 0.49 >More info 0.66 >More info 8h-DC3000 leaves Original data GEO bulk
215 spx1 spx2 complete 0.63 >More info 0.51 >More info WT complete seedlings Original data
216 cs26 short-day -0.52 >More info -0.62 >More info Leaves-WT-SD leaf Original data GEO bulk
217 vte2-1 3d vernalization 0.54 >More info 0.60 >More info WT 3d vernalization Original data GEO bulk
218 Rsch 1d 0.53 >More info 0.61 >More info Rsch CA Leaves Original data
219 Laer pretreat GA+JA Flg22 2h 0.59 >More info 0.55 >More info Laer pretreat water control leaf discs Original data GEO bulk
220 S15-118 0.52 >More info 0.62 >More info wt Original data GEO bulk
221 sfr2 control -0.52 >More info -0.62 >More info WT control All aerial tissue Original data GEO bulk
222 Nicotinamide-73hr 0.58 >More info 0.56 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
223 JA 3h 0.34 >More info 0.80 >More info EtOH 3h 3hr Original data GEO bulk
224 Col-0 C2H4 24h 0.57 >More info 0.57 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
225 mkk1/mkk2 control rep 0.57 >More info 0.57 >More info Col-0 Time 0 rep Original data GEO bulk
226 TNT-seedlings 0.45 >More info 0.69 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
227 short 10-degree- 0.58 >More info 0.55 >More info control short Original data GEO bulk
228 wrky33 Bc inoculation 14h 0.60 >More info 0.53 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
229 P.p 6hai 0.54 >More info 0.59 >More info At-Control roots Original data GEO bulk
230 mil4 BTH 0.55 >More info 0.58 >More info Col BTH rosettes Original data GEO bulk
231 AFB1 flg22 2h 0.57 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
232 Nicotinamide-69hr 0.57 >More info 0.56 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
233 LTN008-2 aza-dc 0.59 >More info 0.54 >More info LTN012-2 Mock Original data
234 arf2 brz -0.50 >More info -0.63 >More info arf2 mock Original data GEO bulk
235 shoot-10 μM DEX- 3 hr 0.51 >More info 0.61 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
236 nhx5-2/nhx6 0.53 >More info 0.59 >More info WT Rosette leaf Original data GEO bulk
237 Laer pretreat GA+JA Flg22 1h 0.58 >More info 0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
238 R. solani AG2-1 0.54 >More info 0.58 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
239 NahG 0.53 >More info 0.59 >More info Col-0 Leaves Original data GEO bulk
240 Dark 3day wt 0.58 >More info 0.54 >More info 0h wt Original data
241 WT NAA/flg 1h 0.52 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
242 Te 1d 0.55 >More info 0.57 >More info Te CA Leaves Original data
243 col-5 DC3000-avrRpm 4h 0.51 >More info 0.61 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
244 Salt Stress 24 h (root) 0.57 >More info 0.55 >More info Stress mock 24 h (root) Original data Stress treatments
245 P.p 30hai 0.49 >More info 0.63 >More info At-Control roots Original data GEO bulk
246 pepr1-1 Pepr2-3 +Pep2 10h -0.47 >More info -0.65 >More info WT +Pep2 10h Pep2 Original data GEO bulk
247 Col 8h 0.55 >More info 0.56 >More info Col CA Leaves Original data
248 GO5; 0h switch to ambient CO2 concentrations; -0.60 >More info -0.51 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
249 short 8-degree- 0.59 >More info 0.52 >More info control short Original data GEO bulk
250 Col leaf 100mM NaCl 0.53 >More info 0.58 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
251 Col leaf 100mM NaCl 0.53 >More info 0.58 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
252 Col 100mM NaCl 0.53 >More info 0.58 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
253 35S::PI ap3-3 35S::AP-GR +DEX 0.52 >More info 0.59 >More info 0hr DEX Original data GEO bulk
254 tunicamycin -0.53 >More info -0.58 >More info DMF Original data GEO bulk
255 WT flg22 1h 0.51 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
256 Dark 2day wt 0.62 >More info 0.49 >More info 0h wt Original data
257 WT Na2S -0.48 >More info -0.63 >More info WT water Na2S leaf Original data GEO bulk
258 Elevated CO2 fully expanded leaf 0.57 >More info 0.53 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
259 pho1 0.64 >More info 0.46 >More info Col2WT Original data GEO bulk
260 seedling 6h after HZE WT 0.51 >More info 0.59 >More info seedling day 1 unirradiated WT 6h Original data
261 WT+H2O2 0.54 >More info 0.56 >More info WT H2O2 Original data GEO bulk
262 shoot-10 μM DEX- 6 hr 0.52 >More info 0.58 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
263 Col-0 SA 0.50 >More info 0.60 >More info Col-0 Original data GEO bulk
264 WT cold 12 h 0.53 >More info 0.57 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
265 WT +Pep2 10h 0.52 >More info 0.58 >More info WT untreated Pep2 Original data GEO bulk
266 gpa1 -ABA GC -0.38 >More info -0.72 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
267 WT+chitooctaose 0.46 >More info 0.64 >More info WT+water chitooctaose seedlings Original data GEO bulk
268 seedlings-week-old RECA1-overexpressing
transgenic		 0.44 >More info 0.66 >More info seedlings-week-old Col-0 seedlings Original data
269 Ba1 UV 0.54 >More info 0.55 >More info Ba1 mock UV seedling Original data
270 Dark 3day hml 0.57 >More info 0.52 >More info 0h hml Original data
271 1 h Light Total RNA -0.50 >More info -0.59 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
272 UV Stress 24 h (shoot) 0.48 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
273 WT NAA/flg 2h 0.49 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
274 seedling 6h after Gamma atm-1 0.54 >More info 0.54 >More info seedling day 1 unirradiated atm-1 6h Original data
275 pnp1-1 3h +P 0.54 >More info 0.54 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
276 rosettes WT drought 0.56 >More info 0.52 >More info rosettes WT watered Original data GEO bulk
277 mkk2 24h BTH rep 0.46 >More info 0.62 >More info Col-0 24h BTH rep Original data GEO bulk
278 Atss3 Dark4 -0.44 >More info -0.64 >More info Atss3 Dark0.5 Original data GEO bulk
279 PAHs stress 0.49 >More info 0.59 >More info exp control phenanthrene whole plants Original data GEO bulk
280 Col ozone 3h 0.37 >More info 0.71 >More info Col clean-air 3h ozone Original data GEO bulk
281 RRE1 Chitin 0.54 >More info 0.53 >More info Chitin Original data GEO bulk
282 Nicotinamide-93hr 0.56 >More info 0.51 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
283 low water potential 0.56 >More info 0.51 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
284 M6PR transgenic leaf 100mM NaCl -0.45 >More info -0.62 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
285 4C 2h(SOIL) 0.32 >More info 0.75 >More info 4C 0h(SOIL) Original data GEO bulk
286 shoots bhlh100/101 0uM Fe 0.57 >More info 0.50 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
287 IRP1-OE-Ctrl--root 0.47 >More info 0.60 >More info COL-0-Ctrl--root root Original data
288 scrm-D 0.59 >More info 0.47 >More info Col-0 WT whole seedling Original data GEO bulk
289 Myzus persicae saliva 0.53 >More info 0.53 >More info Control Original data GEO bulk
290 aphid saliva treated 0.53 >More info 0.53 >More info control aphid saliva treated leaves Original data GEO bulk
291 cs26 long day 0.51 >More info 0.55 >More info Leaves-WT-LD leaf Original data GEO bulk
292 coi1-16 ein2 sid2 ozone 0.63 >More info 0.43 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
293 SA 4mM 0.63 >More info 0.43 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
294 sfr6 drought -0.44 >More info -0.62 >More info WT drought All aerial tissue Original data GEO bulk
295 whole roots 140 mM NaCl 1 hour 0.45 >More info 0.61 >More info whole roots standard Original data GEO bulk
296 Te 8h 0.50 >More info 0.55 >More info Te CA Leaves Original data
297 Nicotinamide-49hr 0.51 >More info 0.54 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
298 root Dosed gold 0.50 >More info 0.55 >More info root No gold .125 mM gold 24 h roots Original data
299 aox1a(line) MLD stressed 0.51 >More info 0.54 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
300 WT Shoot-Pi 0.59 >More info 0.46 >More info WT Shoot+Pi shoots Original data GEO bulk
301 CHLM overexpression -0.53 >More info -0.52 >More info Col-0 estr green tissue Original data GEO bulk
302 0.125 mM gold 24 h 0.50 >More info 0.55 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
303 miR393 flg22 1h 0.45 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
304 AFB1 flg22 1h 0.49 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
305 toc1-1-73hr 0.49 >More info 0.56 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
306 chito-tetramer 0.43 >More info 0.62 >More info Col Mock Original data GEO bulk
307 abi1 hypocotyl 0.41 >More info 0.64 >More info Ler hypocotyl hypocotyl Original data GEO bulk
308 eds16 whole leaf 5dpi -0.47 >More info -0.58 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
309 P.p 10.5hai 0.48 >More info 0.57 >More info At-Control roots Original data GEO bulk
310 35S:VND7-VP16-GR+CHX 0.47 >More info 0.58 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
311 gh3.5D uninoculated -0.47 >More info -0.58 >More info Col-0 48 hpi Original data GEO bulk
312 Dex-rga(delta17) 4h GA4+DEX -0.47 >More info -0.58 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
313 apk1 apk2 0.51 >More info 0.53 >More info Col0-control whole rosette Original data GEO bulk
314 D2O 0.52 >More info 0.52 >More info H2O seedling Original data GEO bulk
315 npr1 sni1 SA 0.51 >More info 0.53 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
316 Got7 UV 0.35 >More info 0.69 >More info Got7 mock UV seedling Original data
317 12h-DC3000 avrRpm1 0.33 >More info 0.71 >More info 12h-DC3000 leaves Original data GEO bulk
318 anac017-1 H2O2 3h -0.46 >More info -0.58 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
319 opr3 JA 2 h 0.37 >More info 0.67 >More info opr3 0 h Original data GEO bulk
320 Cor 24h 0.49 >More info 0.55 >More info Mock 24h Cor Original data GEO bulk
321 tt4 0.49 >More info 0.55 >More info Col-0 aerial part Original data
322 aox1a:rpoTmp MLD stressed -0.50 >More info -0.53 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
323 WT H2O2 3h 0.50 >More info 0.53 >More info WT water 3h 3h_H2O2 Original data GEO bulk
324 miR393 0h -0.40 >More info -0.63 >More info WT 0h Leaf tissue Original data GEO bulk
325 RPL18 TuMV inoculated total RNA 0.46 >More info 0.57 >More info mock inoculated total RNA PO Original data GEO bulk
326 CAX1/CAX3 mutant 0.48 >More info 0.55 >More info Col whole plant Original data GEO bulk
327 Stem wox4 -0.48 >More info -0.55 >More info Stem Col first internode of stem Original data GEO bulk
328 6h +Pi -0.49 >More info -0.54 >More info 6h -Pi root Original data GEO bulk
329 08h Col-0 0.45 >More info 0.58 >More info 00h Col-0 Original data GEO bulk
330 1 h Light IP RNA -0.47 >More info -0.56 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
331 sni1 0.45 >More info 0.58 >More info WT Original data GEO bulk
332 Salt Stress 24 h (shoot) 0.50 >More info 0.52 >More info Stress mock 24 h (shoot) Original data Stress treatments
333 Shoot P recovery 0.57 >More info 0.45 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
334 AvrRpm1 2 h (leaf) 0.34 >More info 0.68 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
335 SCR-GR Time 12H Dex 0.48 >More info 0.54 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
336 ckh1 CK200 0.47 >More info 0.55 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
337 tetraploid 0.34 >More info 0.68 >More info diploid Original data GEO bulk
338 seedling 1.5h after HZE WT 0.50 >More info 0.51 >More info seedling day 1 unirradiated WT 1.5h Original data
339 C24 ozone 0.57 >More info 0.44 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
340 rGRF 0.50 >More info 0.51 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
341 WT light -0.51 >More info -0.50 >More info WT dark Original data GEO bulk
342 npr1-3 MOCK 48h -0.37 >More info -0.64 >More info Col-0 MOCK 48h Original data GEO bulk
343 8hr-pH4.5 0.48 >More info 0.53 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
344 WT Red light 18h -0.45 >More info -0.56 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
345 gpa1-4/agb1-2 ozone 2d -0.47 >More info -0.54 >More info Col ozone 2d ozone Original data GEO bulk
346 nia1nia2 0.48 >More info 0.53 >More info Col-0 whole seedlings Original data GEO bulk
347 whole roots 140 mM NaCl 30 minutes 0.44 >More info 0.57 >More info whole roots standard Original data GEO bulk
348 bZIP1ko mutant N+Light+ 0.56 >More info 0.44 >More info WT-sib N+Light+ whole plant Original data GEO bulk
349 Col-0-3h IAA 0.57 >More info 0.43 >More info Col-0-0h IAA whole plant Original data GEO bulk
350 WT +Pep2 2h 0.65 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
351 Homozygous-AtcesA4 0.51 >More info 0.49 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
352 RGA-GR-DEX 0.30 >More info 0.70 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
353 des1.1 0.36 >More info 0.64 >More info Leaves-WT leaf Original data GEO bulk
354 WT powdery mildew 0.47 >More info 0.53 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
355 gun1gun5 far-red pretreated -0.52 >More info -0.47 >More info WT far-red pretreated Original data GEO bulk
356 toc1-1-93hr 0.53 >More info 0.46 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
357 Col-0 low oxygen 0.49 >More info 0.50 >More info Col-0 Original data GEO bulk
358 PBZ 0.45 >More info 0.54 >More info none PBZ Rosette Original data GEO bulk
359 ice1 3H Cold 0.48 >More info 0.51 >More info WT 3H Cold Original data GEO bulk
360 20d after anthesis 0.46 >More info 0.53 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
361 HSP90 Reduced hsp90.2 0.48 >More info 0.51 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
362 Col-O high light 0.49 >More info 0.50 >More info Col-O bule light Original data GEO bulk
363 Mutant cry1 (High Light) -0.55 >More info -0.43 >More info Col-0 (High Light) Original data GEO bulk
364 35:SUB1A 0.51 >More info 0.47 >More info WT whole seedling Original data GEO bulk
365 cpr5 0.50 >More info 0.48 >More info WT seedling Original data GEO bulk
366 Nicotinamide-65hr 0.51 >More info 0.47 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
367 AtMYB30-ox 90-105 min Xanthomonas 0.59 >More info 0.39 >More info WT 90-105 min Xanthomonas Original data GEO bulk
368 cry1 high light -0.55 >More info -0.43 >More info Col-O high light Original data GEO bulk
369 rosettes drought 0.47 >More info 0.51 >More info rosettes watered Original data GEO bulk
370 rosette leaves bdg 0.36 >More info 0.62 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
371 SCR-GR Time 1H Dex 0.41 >More info 0.57 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
372 Bur-0-3h IAA 0.48 >More info 0.50 >More info Bur-0h IAA whole plant Original data GEO bulk
373 root stele 40 mM NaCls 0.48 >More info 0.50 >More info root stele Original data GEO bulk
374 Wt-BA-sample 0.42 >More info 0.56 >More info Wt-dmso-sample seedling Original data
375 seedling 6h after HZE atm-1 0.42 >More info 0.56 >More info seedling day 1 unirradiated atm-1 6h Original data
376 abi4-102 (II) 0.46 >More info 0.51 >More info Col (II) rosette Original data GEO bulk
377 OsSAP11 expressing -0.43 >More info -0.54 >More info WT seedlings Original data GEO bulk
378 Col-0 INA 48h 0.40 >More info 0.56 >More info Col-0 MOCK 48h Original data GEO bulk
379 pnp1-1 3h -P 0.51 >More info 0.45 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
380 Selenate (root) 0.38 >More info 0.58 >More info Ws (root) Original data GEO bulk
381 til1-1 22C 0.35 >More info 0.61 >More info Col-0 22C Original data GEO bulk
382 ataf1-1 mutant Col-0 Un-inoculated -0.46 >More info -0.50 >More info WT Col-0 Un-inoculated Original data GEO bulk
383 abi4-102 (I) 0.44 >More info 0.52 >More info Col (I) rosette Original data GEO bulk
384 ABA JA 24h 0.29 >More info 0.67 >More info EtOH 24h 24hr Original data GEO bulk
385 low CO2 + dark 0.45 >More info 0.51 >More info normal CO2 + light Original data GEO bulk
386 tor mutant glucose 0.46 >More info 0.50 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
387 root endodermis and quiescent center 40 mM NaCl 0.35 >More info 0.61 >More info root endodermis and quiescent center Original data GEO bulk
388 Root Selenate 0.38 >More info 0.58 >More info Root control 40 micromolar selenate Root Original data GEO bulk
389 35S:RPS4 rrs1-11 T0 0.22 >More info 0.74 >More info 35S:RPS4 T0 leaves Original data
390 dTLEc systemic wounding -0.40 >More info -0.55 >More info wt systemic wounding leaves Original data GEO bulk
391 cop1 Seedling BL 0.40 >More info 0.55 >More info WT Seedling BL Original data GEO bulk
392 Laer pretreat GA Flg22 0h 0.54 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
393 rao2 H2O2 3h -0.50 >More info -0.45 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
394 leaf blade in FRD 0.44 >More info 0.51 >More info leaf blade in WL leaf blades Original data GEO bulk
395 atgsnor1-1 -0.43 >More info -0.52 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
396 OH1 0.45 >More info 0.50 >More info Col-0 leaves Original data GEO bulk
397 CabpBVR2 0.43 >More info 0.52 >More info WT Original data GEO bulk
398 Dex-rga(delta17) 2h GA4+DEX -0.42 >More info -0.53 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
399 Col 3d 0.38 >More info 0.57 >More info Col CA Leaves Original data
400 shoot-10 μM DEX- 12 hr 0.41 >More info 0.54 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
401 vte2 leaves 48h LT 0.54 >More info 0.40 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
402 Compost 0.40 >More info 0.54 >More info Perlite Compost Original data GEO bulk
403 col-5 hrpA 2h 0.40 >More info 0.54 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
404 safener treated 0.41 >More info 0.53 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
405 Primisulfuron EC50 0.44 >More info 0.50 >More info Carrier (primisulfuron) Original data GEO bulk
406 atmyc2 Seedling BL+ABA -0.37 >More info -0.57 >More info WT Seedling BL+ABA Original data GEO bulk
407 3x(p) 0.41 >More info 0.53 >More info 2x two week old seedlings Original data
408 rpoTmp(line) MLD stressed 0.41 >More info 0.53 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
409 sfr3 cold 0.54 >More info 0.39 >More info WT cold All aerial tissue Original data GEO bulk
410 atr mitomycin C 0.54 >More info 0.39 >More info WT mitomycin C shoot apical meristem Original data
411 Col BTH 0.26 >More info 0.67 >More info Col rosettes Original data GEO bulk
412 seedling 12h after HZE WT 0.37 >More info 0.56 >More info seedling day 1 unirradiated WT 12h Original data
413 coi1-2 0.35 >More info 0.58 >More info Col-0 mock Whole seedling Original data GEO bulk
414 ABA JA 3h 0.36 >More info 0.57 >More info EtOH 3h 3hr Original data GEO bulk
415 6h volatiles Sp. HRO-C48 0.32 >More info 0.61 >More info 6h untreated whole seedling Original data GEO bulk
416 triploid female excess -0.20 >More info -0.73 >More info tetraploid Original data GEO bulk
417 atmospheric CO2 low Mg shoot 0.53 >More info 0.39 >More info atmospheric CO2 normal Mg shoot Shoot Original data
418 gpa1 -ABA LF 0.37 >More info 0.55 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
419 FLIGHT TAGESB plate6 ROOTS 0.26 >More info 0.66 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
420 GST-overexpression seedlings control 0.51 >More info 0.41 >More info WT seedlings control Seedlings Original data
421 Dark 6h wt 0.50 >More info 0.42 >More info 0h wt Original data
422 Protoplast Induced 0.32 >More info 0.60 >More info Uninduced Original data GEO bulk
423 TA induced 0.32 >More info 0.60 >More info Methanol TA Suspension cells Original data GEO bulk
424 oas-a1.1 shoot -0.34 >More info -0.58 >More info WT-Untreated Shoot Original data GEO bulk
425 vtc1-1 -0.20 >More info -0.72 >More info Col-0 whole plant Original data GEO bulk
426 Shoot dark control 7h 0.37 >More info 0.54 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
427 IRP1-OE-Fe--root 0.41 >More info 0.50 >More info COL-0-Fe--root root Original data
428 atmyc2 cop1 Seedling BL 0.34 >More info 0.56 >More info WT Seedling BL Original data GEO bulk
429 gai Control 0.55 >More info 0.35 >More info Laer Control leaf discs Original data GEO bulk
430 cca1-lhy 30m light 0.39 >More info 0.51 >More info 30m light whole seedlings Original data GEO bulk
431 RPL18 TuMV inoculated polysomal RNA 0.39 >More info 0.51 >More info mock inoculated polysomal RNA PO Original data GEO bulk
432 nhx5 0.40 >More info 0.50 >More info WT Rosette leaf Original data GEO bulk
433 ABA 1 h 0.29 >More info 0.61 >More info Mock 1 h Original data Basic hormone treatment of seedlings
434 Col-0 +lincomycin 0.33 >More info 0.57 >More info Col-0 -lincomycin Original data GEO bulk
435 myb61 xylem 0.30 >More info 0.60 >More info wt xylem xylem Original data GEO bulk
436 GO5; 8h switch to ambient CO2 concentrations; 0.30 >More info 0.60 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
437 agb1 gpa1 +ABA LF -0.33 >More info -0.56 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
438 ORS1 induced 0.34 >More info 0.55 >More info mock-induced rosette leaves Original data GEO bulk
439 bio4-1 mutant leaves 0.32 >More info 0.56 >More info WT leaves leaves Original data GEO bulk
440 OsRLCK253 expressing -0.32 >More info -0.56 >More info WT seedlings Original data GEO bulk
441 16h Col-0 0.34 >More info 0.54 >More info 00h Col-0 Original data GEO bulk
442 Osmotic Stress 24 h (root) 0.52 >More info 0.36 >More info Stress mock 24 h (root) Original data Stress treatments
443 ACC 1 h 0.37 >More info 0.51 >More info Mock 1 h Original data Basic hormone treatment of seedlings
444 opr3 JA 0.5 h 0.13 >More info 0.75 >More info opr3 0 h Original data GEO bulk
445 HSP90 Reduced RNAi-B1 0.37 >More info 0.51 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
446 AtMYB30-as 90-105 min Xanthomonas 0.21 >More info 0.67 >More info WT 90-105 min Xanthomonas Original data GEO bulk
447 GiantCell Root -0.32 >More info -0.55 >More info Control Root laser captured giant cells Original data GEO bulk
448 seedling 12h after HZE atm-1 0.34 >More info 0.53 >More info seedling day 1 unirradiated atm-1 12h Original data
449 ACC 3 h 0.36 >More info 0.51 >More info Mock 3 h Original data Basic hormone treatment of seedlings
450 gun1-1 +lincomycin -0.24 >More info -0.63 >More info Col-0 +lincomycin Original data GEO bulk
451 35S:RPS4 rrs1-11 2h 0.58 >More info 0.29 >More info 35S:RPS4 2h leaves Original data
452 opr3 OPDA 2 h 0.18 >More info 0.69 >More info opr3 0 h Original data GEO bulk
453 Mutant arf2 (etiol) 0.36 >More info 0.50 >More info Col (etiol) Original data GEO bulk
454 arf2 mock 0.36 >More info 0.50 >More info Col mock Original data GEO bulk
455 4C 1h 0.24 >More info 0.62 >More info 4C 0h Original data GEO bulk
456 WT Seedling BL -0.36 >More info -0.50 >More info WT Seedling Dark Original data GEO bulk
457 Col-0 DCA 48h 0.32 >More info 0.53 >More info Col-0 MOCK 48h Original data GEO bulk
458 Nuclear GSH1 0.33 >More info 0.52 >More info Cytoplasmic GSH1 Control Original data GEO bulk
459 dense canopy 0.32 >More info 0.53 >More info single (control) petiole Original data GEO bulk
460 WT chitooctaose 0.34 >More info 0.51 >More info WT water Original data GEO bulk
461 CeO2 germinant -0.21 >More info -0.64 >More info Millipore Water germinant CeO2 seedling Original data
462 siliques AtHb1 control 0.32 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
463 root longitudinal zone-4 NaCl 0.33 >More info 0.51 >More info root longitudinal zone-4 Original data GEO bulk
464 high R/FR JA spray 0.25 >More info 0.59 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk
465 WT 1wk -P 0.54 >More info 0.29 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
466 oligomycin 1 h 0.31 >More info 0.52 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
467 abh1 -ABA 0.33 >More info 0.50 >More info Col-0 -ABA Original data GEO bulk
468 Col-0 2HS 0.31 >More info 0.52 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
469 seedling 12h after Gamma atm-1 0.31 >More info 0.52 >More info seedling day 1 unirradiated atm-1 12h Original data
470 Mock pft1 leaf 0.13 >More info 0.70 >More info Mock Col-0 leaf water leaf Original data GEO bulk
471 IAA7mII over-expressor IAA Treated 0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
472 35S:RPS4 eds1-2 2h -0.24 >More info -0.58 >More info 35S:RPS4 2h leaves Original data
473 FOX line K16331 0.30 >More info 0.51 >More info empty vector control (T3) FOX lines Original data GEO bulk
474 OE WRKY63.3 high light 0.31 >More info 0.50 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
475 amiRAP hypoxic -0.23 >More info -0.58 >More info hypoxic hypoxia Original data GEO bulk
476 atmyc2 Seedling BL -0.12 >More info -0.69 >More info WT Seedling BL Original data GEO bulk
477 flu dark 8hours/30 minute light 0.20 >More info 0.60 >More info col dark 8hours/30 minute light Original data GEO bulk
478 sex1-3 0.18 >More info 0.62 >More info Col-WT leaves Original data GEO bulk
479 12m.KCl 0.23 >More info 0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
480 HARAP aerobic -0.23 >More info -0.57 >More info WT aerobic aerobic Original data GEO bulk
481 Dex-rga(delta17) 4h GA4 -0.21 >More info -0.59 >More info Vector 4h GA4 shoots Original data GEO bulk
482 ein3 eil1 0.50 >More info 0.29 >More info Col-0 mock Whole seedling Original data GEO bulk
483 downy mildew cotyledons late stage 0.56 >More info 0.23 >More info mock inoculated Cotyledons Original data GEO bulk
484 Col in Pi deficiency medium 0.20 >More info 0.59 >More info Col in control medium root Original data GEO bulk
485 pif4pif5 mut dark -0.29 >More info -0.50 >More info WT dark Original data GEO bulk
486 phyABCDE 4-day dark- 2 hours Rc50 0.25 >More info 0.54 >More info phyABCDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
487 ws 24h4c q8ws 0.52 >More info 0.26 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
488 agb1 gpa1 -ABA LF 0.16 >More info 0.62 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
489 Kas-1 -Fe 24h -0.26 >More info -0.52 >More info Kas-1 +Fe 24h roots Original data GEO bulk
490 Kas -Fe 24h Roots -0.26 >More info -0.52 >More info Kas +Fe 24h Roots Original data GEO bulk
491 6-trichlorophenoxyacetic acid 3 h 0.26 >More info 0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
492 Total RNA 35S:AtCSP1-FH1 cold 0.20 >More info 0.57 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
493 AsAKiin11 T2 0.12 >More info 0.65 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
494 WT-Dry 0.17 >More info 0.59 >More info WT-CK dehydration treatment 1h Original data
495 AtMYB30-ox 2-4h Xanthomonas 0.55 >More info 0.20 >More info WT 2-4h Xanthomonas Original data GEO bulk
496 sex4-3 -0.53 >More info -0.22 >More info Col-WT leaves Original data GEO bulk
497 bio4-1 mutant watered00µM biotin leaves -0.19 >More info -0.56 >More info bio4-1 mutant leaves leaves Original data GEO bulk
498 JA 24h 0.20 >More info 0.55 >More info EtOH 24h 24hr Original data GEO bulk
499 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.52 >More info -0.22 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
500 Hydrogen Peroxide 500 uM 0.20 >More info 0.54 >More info Control RB and PER Hydrogen Peroxide Original data
501 Col-0 24hpi A. brassicicola 0.71 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
502 FLIGHT TAGESB plate 0.50 >More info 0.23 >More info GROUND CONTROL TAGESB plate Original data
503 E.orontii Infection 3 day 0.10 >More info 0.63 >More info Uninfection 3 day Original data Elicitor treatments
504 del1-1 5dpi 0.55 >More info 0.17 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
505 light -0.54 >More info -0.18 >More info dark light seedling Original data GEO bulk
506 agb1 -ABA LF 0.15 >More info 0.57 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
507 ABA SA 24h 0.19 >More info 0.53 >More info EtOH 24h 24hr Original data GEO bulk
508 pistil 0.5HAP 0.51 >More info 0.20 >More info unpollinated pistil pistil Original data GEO bulk
509 GA 0.19 >More info 0.52 >More info none GA Rosette Original data GEO bulk
510 gun1-9 control -0.17 >More info -0.53 >More info Col-0 control Original data GEO bulk
511 Leaf wounded 0.04 >More info 0.66 >More info Leaf control vegetative leaf Original data GEO bulk
512 pnp1-1 1wk -P 0.52 >More info 0.16 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
513 penta Pst DC3000 12hpi 0.53 >More info 0.15 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
514 agb1 gpa1 -ABA GC -0.16 >More info -0.52 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
515 short 17-degree- 0.50 >More info 0.17 >More info control short Original data GEO bulk
516 Root wt CLE10 0.16 >More info 0.51 >More info Root wt CLE25 root tip Original data GEO bulk
517 aln-1 0.52 >More info 0.14 >More info Col-0 Aerial part of seedlings Original data
518 xyl-grown cell culture- 1h 1mM Fru -0.06 >More info -0.60 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
519 HairpinZ 4 h (leaf) 0.68 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
520 shoot hypoxia p35S 0.13 >More info 0.51 >More info shoot hypoxia total Original data GEO bulk
521 vte2 leaves 120h LT 0.59 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
522 Red/FR Light45min -0.01 >More info -0.62 >More info FarRed Light 45min Original data Light treatments
523 seedling 3h after HZE WT 0.60 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
524 col-5 DC3000 4h 0.03 >More info 0.59 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
525 Full C2 T2 0.10 >More info 0.51 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
526 35S:RPS4 rrs1-11 24h -0.50 >More info -0.09 >More info 35S:RPS4 24h leaves Original data
527 Blue Light 45 min 0.05 >More info 0.53 >More info White Light 45min Original data Light treatments
528 Col PSTDC3000 24h 0.71 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
529 coi1 -0.05 >More info -0.52 >More info Col-0 Leaves Original data GEO bulk
530 P.syringae vir 4 h (leaf) 0.55 >More info 0.01 >More info Mock 4 h (leaf) Original data Elicitor treatments
531 Dark 2day ivd 0.57 >More info -0.01 >More info 0h ivd Original data
532 P. infestans 6 h (leaf) 0.70 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
533 bri1-116 -0.19 >More info 0.73 >More info Col seedling Original data GEO bulk
534 agb1 -ABA GC 0.07 >More info -0.58 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
535 35SAvr -0.02 >More info 0.52 >More info Ecotype Col Original data GEO bulk
536 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
537 amiRAP aerobic 0.12 >More info -0.61 >More info WT aerobic aerobic Original data GEO bulk
538 seed germinating in countinuous light 24h SL -0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
539 Shoot apex inflorescence (after bolting) -0.26 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
540 Light 3day hml -0.27 >More info 0.50 >More info 0h hml Original data