4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on coi1-2
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List of experiments correlated with "coi1-2"  Help Download transcriptome of top 30
Score Experiment Correlation from
coi1-2		 Correlation to
coi1-2		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 coi1-2 1.00 >More info 1.00 >More info Col-0 mock Whole seedling Original data GEO bulk
2 coi1-2 JA 0.89 >More info 0.86 >More info JA Whole seedling Original data GEO bulk
3 efr-1 +elf18 10h -0.76 >More info -0.75 >More info WT +elf18 10h elf18 Original data GEO bulk
4 seedlings-week-old RECA1-overexpressing
transgenic		 0.78 >More info 0.72 >More info seedlings-week-old Col-0 seedlings Original data
5 TNT-seedlings 0.72 >More info 0.77 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
6 CMP 4hr 0.77 >More info 0.69 >More info Acetone 4hr root Original data GEO bulk
7 GST 4 h (leaf) 0.70 >More info 0.75 >More info Mock 4 h (leaf) Original data Elicitor treatments
8 WT 2-4h Xanthomonas 0.70 >More info 0.74 >More info WT T0 Original data GEO bulk
9 low CO2 + light 0.73 >More info 0.70 >More info normal CO2 + light Original data GEO bulk
10 GST NPP1 4 h (leaf) 0.72 >More info 0.70 >More info Mock 4 h (leaf) Original data Elicitor treatments
11 bak1-3 +Pep2 10h 0.72 >More info 0.70 >More info WT +Pep2 10h Pep2 Original data GEO bulk
12 +1.6 mM Tween 20 1 h. 0.69 >More info 0.73 >More info +distilled water 1 h. Original data GEO bulk
13 Seedling KUA1-IOX est 0.65 >More info 0.76 >More info Seedling KUA1-IOX mock Original data
14 E.coli TUV86 2 fliC 7h 0.73 >More info 0.68 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
15 AvrRpm1 2 h (leaf) 0.71 >More info 0.70 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
16 seedlings protease IV 0.73 >More info 0.67 >More info seedlings nontreated control whole seedling Original data
17 col-5 hrpA 12h 0.69 >More info 0.71 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
18 Col ozone 3h 0.67 >More info 0.73 >More info Col clean-air 3h ozone Original data GEO bulk
19 Phaseolicola 2 h (leaf) 0.70 >More info 0.69 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
20 cpr5npr1 0.70 >More info 0.68 >More info WT(COL) Original data GEO bulk
21 Lipopolysaccaride4 h (leaf) 0.68 >More info 0.70 >More info Mock 4 h (leaf) Original data Elicitor treatments
22 plant (tga2-5-6) 4h phytoprostane A1 0.62 >More info 0.75 >More info plant (tga2-5-6) 4h control Original data GEO bulk
23 ABA DFPM 0.71 >More info 0.66 >More info control Original data GEO bulk
24 SA 4mM 0.72 >More info 0.65 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
25 low CO2 + dark 0.68 >More info 0.68 >More info normal CO2 + light Original data GEO bulk
26 oligomycin 4 h 0.70 >More info 0.66 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
27 E.coli 0157 H7 7h 0.73 >More info 0.63 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
28 vte2-1 3d vernalization 0.73 >More info 0.63 >More info WT 3d vernalization Original data GEO bulk
29 pepr1-1 Pepr2-3 +Pep2 2h -0.71 >More info -0.65 >More info WT +Pep2 2h Pep2 Original data GEO bulk
30 35S:RPS4 eds1-2 8h -0.70 >More info -0.66 >More info 35S:RPS4 8h leaves Original data
31 Col-0 under 4 days salt 0.74 >More info 0.61 >More info Col-0 under control 4 days salt treatment rosette Original data
32 dde2-2 9 hpi A. brassicicola 0.73 >More info 0.62 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
33 35S:RPS4 eds1-2 24h -0.72 >More info -0.63 >More info 35S:RPS4 24h leaves Original data
34 DFPM 0.67 >More info 0.68 >More info control Original data GEO bulk
35 Flagellin 4 h (leaf) 0.68 >More info 0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
36 35S:RPS4 eds1-2 2h -0.64 >More info -0.70 >More info 35S:RPS4 2h leaves Original data
37 Col-0 C2H4 24h 0.71 >More info 0.63 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
38 Col whole leaf 5dpi 0.70 >More info 0.64 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
39 IMI 4mM 0.74 >More info 0.60 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
40 CMV-WT 0.70 >More info 0.63 >More info Mock-At Aerial tissues Original data GEO bulk
41 OE WRKY63.3 high light 0.68 >More info 0.65 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
42 WT +elf18 2h 0.68 >More info 0.64 >More info WT untreated elf18 Original data GEO bulk
43 Nicotinamide-53hr 0.65 >More info 0.67 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
44 hrpA fliC 7h 0.66 >More info 0.66 >More info Mock 7h hrpA fliC Original data GEO bulk
45 Cycloheximide 3 h 0.71 >More info 0.61 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
46 Cor hrpS 10h 0.65 >More info 0.66 >More info Mock 10h Cor hrpS Original data GEO bulk
47 Col0-PsmES4326-24hpi 0.70 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
48 WT AntimycinA 3h 0.68 >More info 0.63 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
49 Col-0-avrB-6h 0.66 >More info 0.65 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
50 oas-a1.1 Cd 18h 0.63 >More info 0.67 >More info Cd 18h root Root Original data GEO bulk
51 Osmotic Stress 24 h (shoot) 0.69 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
52 AgNO3 3 h 0.65 >More info 0.64 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
53 Col BTH 0.61 >More info 0.67 >More info Col rosettes Original data GEO bulk
54 pmr5 pmr6 0.67 >More info 0.61 >More info Col-0 Original data GEO bulk
55 safener treated 0.65 >More info 0.63 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
56 HopZ1a treated 0.68 >More info 0.60 >More info col Original data GEO bulk
57 DC3000 2 h (leaf) 0.63 >More info 0.64 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
58 Mutant siz1-3 (Drought) 0.74 >More info 0.53 >More info Col-0 (Drought) Original data GEO bulk
59 cpr5 0.68 >More info 0.59 >More info WT(COL) Original data GEO bulk
60 Col-0 9 hpi A. brassicicola 0.66 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
61 cpr5npr1svi1 0.64 >More info 0.63 >More info WT(COL) Original data GEO bulk
62 Fenclorim 4hr 0.65 >More info 0.62 >More info Acetone 4hr root Original data GEO bulk
63 P.syringae AvrRpt2 4 h (leaf) 0.64 >More info 0.63 >More info Mock 4 h (leaf) Original data Elicitor treatments
64 siz1-3 drought 0.74 >More info 0.53 >More info Col-0 drought Original data GEO bulk
65 Laer treat paclobutrazol (PAC) 0.66 >More info 0.61 >More info Laer Control leaf discs Original data GEO bulk
66 hrpA 7h 0.68 >More info 0.59 >More info Mock 7h hrpA Original data GEO bulk
67 col-5 DC3000 12h 0.67 >More info 0.60 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
68 WT+chitooctaose 0.61 >More info 0.66 >More info WT+water chitooctaose seedlings Original data GEO bulk
69 Nicotinamide-57hr 0.64 >More info 0.63 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
70 anac017-2 AntimycinA 3h -0.64 >More info -0.62 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
71 Cor 10h 0.64 >More info 0.62 >More info Mock 10h Cor Original data GEO bulk
72 ataf1-1 mutant Col-0 Bgh inoculated 0.67 >More info 0.59 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
73 Cocultivation 8 hrs root 0.65 >More info 0.61 >More info Mock cocultivation 8 hrs root Root Original data
74 Sulfometuron EC50 0.64 >More info 0.62 >More info Carrier Original data GEO bulk
75 pad4-PsmES4326-24hpi -0.69 >More info -0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
76 chito-tetramer 0.62 >More info 0.63 >More info Col Mock Original data GEO bulk
77 WT +elf18 10h 0.69 >More info 0.56 >More info WT untreated elf18 Original data GEO bulk
78 root Dosed gold 0.69 >More info 0.56 >More info root No gold .125 mM gold 24 h roots Original data
79 WT 3h -P 0.57 >More info 0.68 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
80 pvip1 pvip2 0.67 >More info 0.58 >More info Col-0 whole rosettes Original data GEO bulk
81 0.125 mM gold 24 h 0.69 >More info 0.56 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
82 WT flg22 2h 0.68 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
83 Phytoprostane A1 4 h 0.53 >More info 0.71 >More info Col-0 Original data GEO bulk
84 P.p 2.5hai 0.64 >More info 0.60 >More info At-Control roots Original data GEO bulk
85 CAX1/CAX3 mutant 0.70 >More info 0.54 >More info Col whole plant Original data GEO bulk
86 cpr5 0.69 >More info 0.55 >More info WT seedling Original data GEO bulk
87 Nicotinamide-65hr 0.63 >More info 0.61 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
88 CMP 24hr 0.70 >More info 0.54 >More info Acetone 24hr root Original data GEO bulk
89 35S::ERF104 Flg22 4h 0.61 >More info 0.63 >More info 35S::ERF104 H2O 4h Original data GEO bulk
90 del1-1 mutant 5d uninfected 0.55 >More info 0.68 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
91 flu 0.62 >More info 0.61 >More info WT Col Original data GEO bulk
92 chito-octamer 0.61 >More info 0.62 >More info Col Mock Original data GEO bulk
93 Col whole leaf 7dpi 0.64 >More info 0.59 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
94 ein2-1 9 hpi A. brassicicola 0.67 >More info 0.55 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
95 WT chitooctaose 0.68 >More info 0.54 >More info WT water Original data GEO bulk
96 CLO 4mM 0.76 >More info 0.46 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
97 rosette leaves fdh 0.57 >More info 0.65 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
98 5-Triiodobenzoic acid3 h 0.51 >More info 0.71 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
99 til1-1 22C 0.69 >More info 0.53 >More info Col-0 22C Original data GEO bulk
100 S15-118 0.57 >More info 0.65 >More info wt Original data GEO bulk
101 upf3 0.65 >More info 0.57 >More info WT whole plant Original data GEO bulk
102 dorn1-1 Root 100 mM ATP 30 min -0.56 >More info -0.65 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
103 Col-0 Flg22 4h 0.59 >More info 0.62 >More info Col-0 H2O 4h Original data GEO bulk
104 9 hr Hypoxia 1 hr recovery Total RNA 0.66 >More info 0.55 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
105 sni1 0.61 >More info 0.60 >More info WT Original data GEO bulk
106 HopZ1a treated ulp1c ulp1d 0.65 >More info 0.56 >More info col Original data GEO bulk
107 WT in -N 0.65 >More info 0.56 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
108 WT-SA 0.65 >More info 0.56 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
109 smg7b-1 0.65 >More info 0.55 >More info WT whole plant Original data GEO bulk
110 gh3.5-1D 48 hpi 0.68 >More info 0.52 >More info Col-0 uninoculated Original data GEO bulk
111 CeO2 germinant -0.52 >More info -0.68 >More info Millipore Water germinant CeO2 seedling Original data
112 Salt Stress 24 h (root) 0.68 >More info 0.52 >More info Stress mock 24 h (root) Original data Stress treatments
113 Fenclorim 24hr 0.62 >More info 0.58 >More info Acetone 24hr root Original data GEO bulk
114 8-DAC chr11-1chr17-1 0.69 >More info 0.51 >More info 8-DAC Col-0 leaf explants Original data
115 csn5 (csn5a-2 csn5b) light 0.71 >More info 0.49 >More info WT light Original data GEO bulk
116 AvrRpt2 Col-0 6hpi 0.69 >More info 0.50 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
117 cpr5scv1 0.67 >More info 0.52 >More info WT(COL) Original data GEO bulk
118 WT+H2O2 0.51 >More info 0.68 >More info WT H2O2 Original data GEO bulk
119 NJ15 0.46 >More info 0.73 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
120 Nicotinamide-81hr 0.63 >More info 0.55 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
121 HARAP aerobic -0.65 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
122 hrcC 0.62 >More info 0.56 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
123 bio4-1 mutant watered00µM biotin leaves -0.65 >More info -0.53 >More info bio4-1 mutant leaves leaves Original data GEO bulk
124 Col ozone 2d 0.63 >More info 0.55 >More info Col clean-air 2d ozone Original data GEO bulk
125 9 hr Hypoxia 1 hr recovery IP RNA 0.67 >More info 0.51 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
126 Nicotinamide-85hr 0.58 >More info 0.60 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
127 Laer pretreat GA Flg22 1h 0.47 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
128 IAA/inhibitor A Treated 0.60 >More info 0.57 >More info IAA Treated Original data GEO bulk
129 sfr6 drought -0.52 >More info -0.65 >More info WT drought All aerial tissue Original data GEO bulk
130 cat2-2; 8h switch to ambient CO2 concentrations; 0.54 >More info 0.63 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
131 pepr1-1 Pepr2-3 +Pep2 10h -0.65 >More info -0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
132 A. thaliana-A. lyrata hybrid -0.62 >More info -0.55 >More info A. thaliana mature leaves before flowering Original data GEO bulk
133 WT-NOCO2 INFECTED 0.64 >More info 0.53 >More info WT-MOCK Original data GEO bulk
134 col-5 DC3000-avrRpm 4h 0.51 >More info 0.66 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
135 mpk6-ko Flg22 4h 0.56 >More info 0.61 >More info mpk6-ko H2O 4h Original data GEO bulk
136 DC3000 hrcC 2 h (leaf) 0.62 >More info 0.55 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
137 oligomycin 1 h 0.54 >More info 0.63 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
138 Col-Luc WT 3h antimycin A 0.62 >More info 0.55 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
139 flu over-tAPX 0.59 >More info 0.58 >More info WT Col Original data GEO bulk
140 Shoot -Cs 0.46 >More info 0.71 >More info Control-shoot Original data GEO bulk
141 Primisulfuron EC50 0.62 >More info 0.54 >More info Carrier (primisulfuron) Original data GEO bulk
142 Col-0 INA 48h 0.67 >More info 0.49 >More info Col-0 MOCK 48h Original data GEO bulk
143 msh1 albino 0.64 >More info 0.52 >More info WT aerial part Original data GEO bulk
144 S58-2 0.60 >More info 0.56 >More info wt Original data GEO bulk
145 eds16 whole leaf 5dpi -0.62 >More info -0.54 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
146 aox1a:rpoTmp untreated 0.60 >More info 0.56 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
147 UV Stress 24 h (shoot) 0.65 >More info 0.51 >More info Stress mock 24 h (shoot) Original data Stress treatments
148 BLM+INA 0.61 >More info 0.55 >More info CK BLM and INA seedling Original data
149 WT 30μM arsenate 8 hours. 0.62 >More info 0.54 >More info WT control (not supplemented). Original data
150 R. solani AG8 0.62 >More info 0.54 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
151 GO5; 8h switch to ambient CO2 concentrations; 0.54 >More info 0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
152 npr1 sni1 brca2a SA -0.59 >More info -0.57 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
153 aba3-1 0.54 >More info 0.61 >More info wt Original data GEO bulk
154 Nicotinamide-73hr 0.59 >More info 0.56 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
155 Leafminer damaged seedlings 0.58 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
156 Nicotinamide-61hr 0.62 >More info 0.52 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
157 WT (Col) glucose -0.52 >More info -0.62 >More info WT (Col) glucose seedlings Original data GEO bulk
158 Col-0 V. longisporum-inoculated 48 hpi 0.58 >More info 0.56 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
159 seedling h S Exp -0.55 >More info -0.59 >More info seedling -S Exp seedling Original data
160 RPL18 TuMV inoculated total RNA 0.64 >More info 0.50 >More info mock inoculated total RNA PO Original data GEO bulk
161 gai Control 0.62 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
162 Triazolopyrimidine EC50 0.61 >More info 0.53 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
163 mkk1/mkk2 24h BTH rep 0.58 >More info 0.56 >More info Col-0 24h BTH rep Original data GEO bulk
164 WT H2O2 3h 0.49 >More info 0.65 >More info WT water 3h 3h_H2O2 Original data GEO bulk
165 rpoTmp(line) MLD stressed 0.57 >More info 0.57 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
166 Shoot -K 0.57 >More info 0.57 >More info Control-shoot Original data GEO bulk
167 K starvation (shoot) 0.57 >More info 0.57 >More info Ws (shoot) Original data GEO bulk
168 (Ws-2)+100 uM As 0.59 >More info 0.54 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
169 amiRAP aerobic -0.60 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
170 camta1/2/3 24h cold 0.59 >More info 0.54 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
171 inhibitor A Treated 0.51 >More info 0.62 >More info Negative Control Original data GEO bulk
172 9 hr Hypoxia Total RNA 0.62 >More info 0.51 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
173 erf104-ko Flg22 4h 0.54 >More info 0.59 >More info erf104-ko H2O 4h Original data GEO bulk
174 Te ozone 0.64 >More info 0.49 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
175 UV 0.65 >More info 0.48 >More info WT aerial region Original data GEO bulk
176 D2O 0.69 >More info 0.44 >More info H2O seedling Original data GEO bulk
177 Laer Flg22 2h 0.64 >More info 0.49 >More info Laer Control leaf discs Original data GEO bulk
178 SLWF infested 0.66 >More info 0.47 >More info SLWF uninfested rosette tissue Original data GEO bulk
179 Laer Flg22 1h 0.67 >More info 0.45 >More info Laer Control leaf discs Original data GEO bulk
180 Dex-rga(delta17) 4h GA4 -0.55 >More info -0.57 >More info Vector 4h GA4 shoots Original data GEO bulk
181 AZC 0.59 >More info 0.53 >More info noneHS Original data GEO bulk
182 WT NAA/flg 1h 0.65 >More info 0.47 >More info WT 0h Leaf tissue Original data GEO bulk
183 WT flg22 1h 0.63 >More info 0.49 >More info WT 0h Leaf tissue Original data GEO bulk
184 irradiated leaf (WT 1d) 0.71 >More info 0.41 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
185 C24 ozone 0.70 >More info 0.42 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
186 npr1-1 SA -0.65 >More info -0.46 >More info Col-0 SA complete seedling Original data
187 vtc1 (II) 0.65 >More info 0.46 >More info Col (II) rosette Original data GEO bulk
188 sid2-1 cold -0.65 >More info -0.46 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
189 gpa1 -ABA GC -0.46 >More info -0.65 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
190 9 hr Hypoxia IP RNA 0.62 >More info 0.49 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
191 smg5-2 0.63 >More info 0.48 >More info WT whole plant Original data GEO bulk
192 miR393 0h -0.50 >More info -0.61 >More info WT 0h Leaf tissue Original data GEO bulk
193 detached inflorescences 24h 0.48 >More info 0.63 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
194 Elevated CO2 AMPLE N NIGHT 0.50 >More info 0.60 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
195 upf1 0.56 >More info 0.54 >More info WT whole plant Original data GEO bulk
196 WT NAA/flg 2h 0.61 >More info 0.49 >More info WT 0h Leaf tissue Original data GEO bulk
197 anac017-1 H2O2 3h -0.52 >More info -0.58 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
198 ein5-1 ski2-3 0.65 >More info 0.45 >More info Col-0 aerial tissue Original data
199 Nicotinamide-89hr 0.57 >More info 0.53 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
200 Nicotinamide-69hr 0.53 >More info 0.57 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
201 toc1-1-53hr 0.58 >More info 0.52 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
202 TA induced 0.44 >More info 0.65 >More info Methanol TA Suspension cells Original data GEO bulk
203 camta2/3 warm 0.61 >More info 0.48 >More info WT warm entire aerial part Original data GEO bulk
204 camta1/2/3 warm 0.59 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
205 bZIP1ko mutant N+Light- 0.58 >More info 0.51 >More info WT-sib N+Light- whole plant Original data GEO bulk
206 WT Col-0 Bgh inoculated 0.57 >More info 0.52 >More info WT Col-0 Un-inoculated Original data GEO bulk
207 gun1gun5 far-red pretreated -0.49 >More info -0.60 >More info WT far-red pretreated Original data GEO bulk
208 camta3-2 0.62 >More info 0.46 >More info WT Original data GEO bulk
209 root BA 12h 0.50 >More info 0.58 >More info root control 12h boron (5mM) root Original data GEO bulk
210 Roots Cd -0.66 >More info -0.42 >More info Roots control Cd Root Original data GEO bulk
211 Dark 3day ivd 0.61 >More info 0.47 >More info 0h ivd Original data
212 Mutant siz1-3 0.63 >More info 0.45 >More info Col-0 Original data GEO bulk
213 Mutant gh3.5-1D (AvrRpt2) 0.57 >More info 0.51 >More info Col-0 (AvrRpt2) Original data GEO bulk
214 siz1-3 control 0.63 >More info 0.45 >More info Col-0 control Original data GEO bulk
215 WT powdery mildew 0.60 >More info 0.48 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
216 whole roots 140 mM NaCl 30 minutes 0.48 >More info 0.60 >More info whole roots standard Original data GEO bulk
217 SA 0.55 >More info 0.52 >More info WT mock Whole seedling Original data GEO bulk
218 Laer Flg22+GA 2h 0.63 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
219 (Col-0)+100 uM As 0.53 >More info 0.54 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
220 Laer Flg22+GA 1h 0.64 >More info 0.43 >More info Laer Control leaf discs Original data GEO bulk
221 whole roots 140 mM NaCl 1 hour 0.58 >More info 0.49 >More info whole roots standard Original data GEO bulk
222 camta1/3 warm 0.58 >More info 0.49 >More info WT warm entire aerial part Original data GEO bulk
223 Col-0 48 hpi 0.58 >More info 0.49 >More info Col-0 uninoculated Original data GEO bulk
224 ckh1 CK200 0.57 >More info 0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
225 WT seedlings MV 0.54 >More info 0.52 >More info WT seedlings control Seedlings Original data GEO bulk
226 seedlings +5AC 0.64 >More info 0.42 >More info control seedlings 10-day old whole seedling Original data GEO bulk
227 sex1-3 0.53 >More info 0.53 >More info Col-WT leaves Original data GEO bulk
228 phr1 Root-Pi 0.62 >More info 0.44 >More info WT Root+Pi roots Original data GEO bulk
229 (Col-0)+200 uM As 0.54 >More info 0.52 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
230 WT 90-105 min Xanthomonas 0.55 >More info 0.51 >More info WT T0 Original data GEO bulk
231 coi1-16 ein2 sid2 ozone 0.69 >More info 0.37 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
232 sid2-2 9 hpi A. brassicicola 0.56 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
233 P-chlorophenoxy- isobutyric acid 3 h 0.38 >More info 0.68 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
234 tunicamycin -0.36 >More info -0.70 >More info DMF Original data GEO bulk
235 Whole root - low pH 12H 0.49 >More info 0.57 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
236 P.p 6hai 0.62 >More info 0.43 >More info At-Control roots Original data GEO bulk
237 WT 3H Cold 0.50 >More info 0.55 >More info WT control Original data GEO bulk
238 Col-0 ozone 0.64 >More info 0.41 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
239 tor mutant glucose 0.51 >More info 0.54 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
240 mkk1/mkk2 control rep 0.56 >More info 0.49 >More info Col-0 Time 0 rep Original data GEO bulk
241 1 h Light IP RNA -0.44 >More info -0.61 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
242 Dex-rga(delta17) 4h GA4+DEX -0.58 >More info -0.47 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
243 ice1 6H Cold 0.58 >More info 0.47 >More info WT 6H Cold Original data GEO bulk
244 AFB1 flg22 2h 0.58 >More info 0.47 >More info WT 0h Leaf tissue Original data GEO bulk
245 rsa3-1 Na 24h 0.48 >More info 0.57 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
246 csn3-1 light 0.65 >More info 0.39 >More info WT light Original data GEO bulk
247 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.64 >More info 0.40 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
248 35S::MBF1c 0.52 >More info 0.52 >More info control Original data GEO bulk
249 Col-0 low oxygen 0.55 >More info 0.49 >More info Col-0 control low oxygen root Original data GEO bulk
250 P.p 10.5hai 0.63 >More info 0.41 >More info At-Control roots Original data GEO bulk
251 2 hr Hypoxia Total RNA 0.61 >More info 0.43 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
252 spch 0.53 >More info 0.51 >More info Col-0 WT whole seedling Original data GEO bulk
253 rdr6-15 -0.63 >More info -0.41 >More info Col-0 Original data GEO bulk
254 toc1-1-57hr 0.55 >More info 0.49 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
255 SCR-GR Time 1H Dex 0.37 >More info 0.67 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
256 4C 1h 0.45 >More info 0.59 >More info 4C 0h Original data GEO bulk
257 col-5 hrpA 2h 0.42 >More info 0.62 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
258 Seedling-HeatStressed TOTALmRNA 0.46 >More info 0.58 >More info Seedling-control TOTALmRNA seedling Original data
259 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.64 >More info 0.39 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
260 npr1-3 DCA 48h 0.60 >More info 0.43 >More info npr1-3 MOCK 48h Original data GEO bulk
261 C24-3h IAA 0.60 >More info 0.43 >More info C24-0h IAA whole plant Original data GEO bulk
262 Hydrogen Peroxide 500 uM 0.50 >More info 0.53 >More info Control RB and PER Hydrogen Peroxide Original data
263 Osmotic Stress 24 h (root) 0.51 >More info 0.52 >More info Stress mock 24 h (root) Original data Stress treatments
264 plant (Col-0) 4h phytoprostane A1 0.34 >More info 0.69 >More info plant (tga2-5-6) 4h control Original data GEO bulk
265 8hr-pH4.5 0.45 >More info 0.58 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
266 CT101 ozone 0.62 >More info 0.40 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
267 sid2 -0.62 >More info -0.40 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
268 msg2-BR -0.52 >More info -0.50 >More info BR BR dark-grown seedlings Original data GEO bulk
269 Pto inoculated 0.59 >More info 0.43 >More info col Original data GEO bulk
270 P.p 30hai 0.58 >More info 0.44 >More info At-Control roots Original data GEO bulk
271 anac017-2 H2O2 3h -0.53 >More info -0.49 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
272 IAA/inhibitor B Treated 0.37 >More info 0.65 >More info IAA Treated Original data GEO bulk
273 6h +Pi -0.43 >More info -0.59 >More info 6h -Pi root Original data GEO bulk
274 Chitin 0.57 >More info 0.44 >More info Col C Original data GEO bulk
275 toc1-1-65hr 0.55 >More info 0.46 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
276 WT cold 0.58 >More info 0.43 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
277 IRP1-OE-Fe--shoot 0.52 >More info 0.49 >More info COL-0-Fe--shoot shoot Original data
278 ani1 T16 -0.53 >More info -0.48 >More info WT T16 root tissue Original data GEO bulk
279 WT +Pep2 2h 0.66 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
280 OE-HRA1 NS  0.56 >More info 0.45 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
281 nia1nia2 0.60 >More info 0.41 >More info Col-0 whole seedlings Original data GEO bulk
282 dicamba 0.60 >More info 0.41 >More info WT mock whole seedling Original data GEO bulk
283 GA 0.46 >More info 0.55 >More info none GA Rosette Original data GEO bulk
284 Root -Cs 0.49 >More info 0.52 >More info Control-root Original data GEO bulk
285 root stele 40 mM NaCls 0.43 >More info 0.58 >More info root stele Original data GEO bulk
286 Seedling-HeatStressed POLYSOMESmRNA 0.44 >More info 0.57 >More info Seedling-control POLYSOMESmRNA seedling Original data
287 chl1-9 10mM NH4NO3 -0.53 >More info -0.47 >More info col 10mM NH4NO3 Root Original data
288 shoots bhlh100/101 0uM Fe 0.60 >More info 0.40 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
289 FOX line K16331 0.60 >More info 0.40 >More info empty vector control (T3) FOX lines Original data GEO bulk
290 msh1 variegation Col-0 0.51 >More info 0.49 >More info WT Col-0 above ground part of plant Original data GEO bulk
291 rosettes WT drought 0.55 >More info 0.45 >More info rosettes WT watered Original data GEO bulk
292 rosette Light Wounded 0.54 >More info 0.46 >More info rosette Light Control Original data GEO bulk
293 bio4-1 mutant leaves 0.60 >More info 0.40 >More info WT leaves leaves Original data GEO bulk
294 LTN008-2 aza-dc 0.60 >More info 0.40 >More info LTN012-2 Mock Original data
295 edr1 36 h powdery mildew 0.58 >More info 0.42 >More info Col-0 36 h powdery mildew Original data GEO bulk
296 ABA 1 h 0.42 >More info 0.58 >More info Mock 1 h Original data Basic hormone treatment of seedlings
297 6-trichlorophenoxyacetic acid 3 h 0.26 >More info 0.74 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
298 wrky33 Bc inoculation 14h 0.63 >More info 0.36 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
299 ORS1 induced 0.58 >More info 0.41 >More info mock-induced rosette leaves Original data GEO bulk
300 miR393 flg22 1h 0.53 >More info 0.46 >More info WT 0h Leaf tissue Original data GEO bulk
301 ataf1-1 mutant Col-0 Un-inoculated -0.63 >More info -0.36 >More info WT Col-0 Un-inoculated Original data GEO bulk
302 Nicotinamide-93hr 0.51 >More info 0.48 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
303 Dex-rga(delta17) 2h GA4+DEX -0.55 >More info -0.44 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
304 aox1a(line) MLD stressed 0.55 >More info 0.44 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
305 WT 24H Cold 0.53 >More info 0.46 >More info WT control Original data GEO bulk
306 Octopus overexpressor 35SDYG25 0.57 >More info 0.42 >More info WS Original data GEO bulk
307 8h-DC3000 avrRpm1 0.54 >More info 0.45 >More info 8h-DC3000 leaves Original data GEO bulk
308 Chitosan 3h Treatment 0.55 >More info 0.44 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
309 SCR-GR Time 12H Dex 0.49 >More info 0.50 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
310 myb3 myb3r4d 0.47 >More info 0.52 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
311 scrm-D 0.49 >More info 0.50 >More info Col-0 WT whole seedling Original data GEO bulk
312 bHLH122 ox -0.46 >More info -0.53 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
313 WT drought 0.43 >More info 0.56 >More info WT control All aerial tissue Original data GEO bulk
314 whole roots 140 mM NaCl 4 hour 0.49 >More info 0.50 >More info whole roots standard Original data GEO bulk
315 A6 mutant 0.62 >More info 0.36 >More info WT rosette leaves Rosette leaves Original data GEO bulk
316 msh1 stunt 0.50 >More info 0.48 >More info WT Col-0 above ground part of plant Original data GEO bulk
317 BLM 0.52 >More info 0.46 >More info CK BLM seedling Original data
318 overexpresser LBD38 in -N -0.57 >More info -0.41 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
319 ceh1 mutant 0.55 >More info 0.43 >More info Parent line Original data
320 Cold Stress 24 h (root) 0.63 >More info 0.35 >More info Stress mock 24 h (root) Original data Stress treatments
321 root endodermis and quiescent center 40 mM NaCl 0.50 >More info 0.48 >More info root endodermis and quiescent center Original data GEO bulk
322 pmr4-1 powdery mildew 0.50 >More info 0.48 >More info WT powdery mildew uninoculated Original data GEO bulk
323 AFB1 flg22 1h 0.53 >More info 0.45 >More info WT 0h Leaf tissue Original data GEO bulk
324 Leaf wounded 0.34 >More info 0.64 >More info Leaf control vegetative leaf Original data GEO bulk
325 35S::PI ap3-3 35S::AP-GR +DEX 0.40 >More info 0.58 >More info 0hr DEX Original data GEO bulk
326 pmr5 0.47 >More info 0.51 >More info Col-0 Original data GEO bulk
327 pho1 0.56 >More info 0.41 >More info Col2WT Original data GEO bulk
328 Mutant cry1 (High Light) -0.56 >More info -0.41 >More info Col-0 (High Light) Original data GEO bulk
329 Col-0 INA 6d 0.59 >More info 0.38 >More info Col-0 MOCK 6d Original data GEO bulk
330 root cells cortex 140mM NaCl 8 hours 0.51 >More info 0.46 >More info root cells cortex standard 1 hour root cells cortex Original data
331 cs26 long day 0.56 >More info 0.41 >More info Leaves-WT-LD leaf Original data GEO bulk
332 coi1-16 ein2 sid2 ctrl -0.59 >More info -0.38 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
333 edr1 18 h powdery mildew 0.55 >More info 0.42 >More info Col-0 18 h powdery mildew Original data GEO bulk
334 cry1 high light -0.56 >More info -0.41 >More info Col-O high light Original data GEO bulk
335 ABA 3 h 0.39 >More info 0.58 >More info Mock 3 h Original data Basic hormone treatment of seedlings
336 Protoplast Induced 0.34 >More info 0.63 >More info Uninduced Original data GEO bulk
337 1h +Pi -0.44 >More info -0.53 >More info 1h -Pi root Original data GEO bulk
338 Rose Bengal 0.5 uM 0.40 >More info 0.57 >More info Control RB and PER Rose Bengal Original data
339 seedling -S Exp 0.40 >More info 0.57 >More info seedling FN Exp seedling Original data
340 Col-0 2HS 0.56 >More info 0.40 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
341 seedling 3h after Gamma WT 0.56 >More info 0.40 >More info seedling day 1 unirradiated WT 3h Original data
342 Shoot submergence 24h 0.40 >More info 0.56 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
343 1 h Light Total RNA -0.40 >More info -0.56 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
344 RPL18 TuMV inoculated polysomal RNA 0.57 >More info 0.39 >More info mock inoculated polysomal RNA PO Original data GEO bulk
345 cell culture 4 h phytoprostane A1 0.37 >More info 0.59 >More info cell culture 4 h control Original data GEO bulk
346 WT-Dry 0.43 >More info 0.53 >More info WT-CK dehydration treatment 1h Original data
347 abi4-102 (II) 0.56 >More info 0.39 >More info Col (II) rosette Original data GEO bulk
348 Botrytis cinerea 48h 0.55 >More info 0.40 >More info control 48h Original data GEO bulk
349 4C 2h(SOIL) 0.50 >More info 0.45 >More info 4C 0h(SOIL) Original data GEO bulk
350 Nicotinamide-49hr 0.53 >More info 0.42 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
351 mtf1-1 -0.50 >More info -0.45 >More info Col0 root Original data
352 miR393 flg22 2h 0.51 >More info 0.44 >More info WT 0h Leaf tissue Original data GEO bulk
353 ulp1c ulp1d +Pto 0.51 >More info 0.44 >More info ulp1c ulp1d mock Original data GEO bulk
354 Uniconazole 12 h 0.51 >More info 0.44 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
355 Col in Pi deficiency medium 0.34 >More info 0.61 >More info Col in control medium root Original data GEO bulk
356 4d red light grown hmr-5 seedlings 0.45 >More info 0.50 >More info 4d red light grown WT(Col-0) seedlings Original data
357 WT Bc inoculation 14h 0.57 >More info 0.37 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
358 dor control 0.59 >More info 0.35 >More info WT control Original data GEO bulk
359 IAA7mII over-expressor IAA Treated 0.25 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
360 IXB induced 0.35 >More info 0.59 >More info Methanol IXB Suspension cells Original data GEO bulk
361 col-5 hrpA 4h 0.41 >More info 0.53 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
362 OE-HRA1 2HS  0.55 >More info 0.38 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
363 seedling 6h after HZE WT 0.54 >More info 0.39 >More info seedling day 1 unirradiated WT 6h Original data
364 toc1-1-49hr 0.56 >More info 0.37 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
365 Laer Alternaria 3dpi -0.51 >More info -0.42 >More info Laer Control leaf discs Original data GEO bulk
366 Leafminer locally damaged thaliana seedlings 0.58 >More info 0.35 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
367 npr1-PsmES4326-24hpi -0.50 >More info -0.43 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
368 ISOXABEN -0.51 >More info -0.42 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
369 abi4 vtc2 (I) 0.63 >More info 0.30 >More info Col (I) rosette Original data GEO bulk
370 Leaf systemic 0.41 >More info 0.52 >More info Leaf control vegetative leaf Original data GEO bulk
371 root cells endodermis 140mM NaCl 3 hours 0.43 >More info 0.50 >More info root cells endodermis standard 1 hour root cells endodermis Original data
372 rosette Dark Wounded 0.53 >More info 0.39 >More info rosette Dark Control Original data GEO bulk
373 OE WRKY40.4 -0.54 >More info -0.38 >More info OE WRKY40.4 none leaf Original data GEO bulk
374 npr1 sni1 SA 0.55 >More info 0.37 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
375 sps1 -0.54 >More info -0.38 >More info WT seedling Original data GEO bulk
376 ice1 control 0.59 >More info 0.33 >More info WT control Original data GEO bulk
377 psae1-3 stn7-1 0.59 >More info 0.33 >More info WS rosette leaves Original data GEO bulk
378 vtc2 (I) 0.59 >More info 0.33 >More info Col (I) rosette Original data GEO bulk
379 dor drought 0.63 >More info 0.28 >More info WT drought Original data GEO bulk
380 downy mildew cotyledons late stage 0.55 >More info 0.36 >More info mock inoculated Cotyledons Original data GEO bulk
381 Dark 6h ivd 0.54 >More info 0.37 >More info 0h ivd Original data
382 OH1 0.55 >More info 0.36 >More info Col-0 leaves Original data GEO bulk
383 PNO8 3 h 0.28 >More info 0.63 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
384 Wounding Stress3 h (root) -0.38 >More info -0.53 >More info Stress mock 3 h (root) Original data Stress treatments
385 35:SUB1A 0.60 >More info 0.31 >More info WT whole seedling Original data GEO bulk
386 vte2 leaves 48h LT 0.61 >More info 0.30 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
387 FLIGHT TAGESB plate6 ROOTS 0.30 >More info 0.61 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
388 camta3-1 0.52 >More info 0.38 >More info WT Original data GEO bulk
389 ani1 T0.5 -0.51 >More info -0.39 >More info WT T0.5 root tissue Original data GEO bulk
390 miR 0h 0.66 >More info 0.24 >More info Col 0h Leaf Original data GEO bulk
391 Col-0-3h IAA 0.53 >More info 0.37 >More info Col-0-0h IAA whole plant Original data GEO bulk
392 lht1 untreated 0.50 >More info 0.40 >More info WT untreated untreated leaf Original data GEO bulk
393 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.68 >More info -0.22 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
394 Mutant NahG(leaf) -0.52 >More info -0.38 >More info Col-0 (leaf) Original data GEO bulk
395 atmospheric CO2 low Mg shoot 0.62 >More info 0.28 >More info atmospheric CO2 normal Mg shoot Shoot Original data
396 col-5 DC3000 4h 0.38 >More info 0.52 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
397 HSP90 Reduced RNAi-B1 0.40 >More info 0.50 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
398 Bay-0-3h IAA 0.59 >More info 0.31 >More info Bay-0-0h IAA whole plant Original data GEO bulk
399 AFB1 0h 0.60 >More info 0.30 >More info Col 0h Leaf Original data GEO bulk
400 albino Ds13-2198-1 -0.59 >More info -0.31 >More info control Original data GEO bulk
401 17 0h total -0.50 >More info -0.39 >More info 27 0h total whole seedlings floating on MS medium Original data
402 flu dark 8hours/30 minute light 0.27 >More info 0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
403 siliques AtHb1 control 0.37 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
404 irradiated leaf (cmt 5d) 0.58 >More info 0.31 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
405 Cor 24h 0.57 >More info 0.32 >More info Mock 24h Cor Original data GEO bulk
406 Shoot dark control 24h 0.32 >More info 0.57 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
407 Mutant axr3-1 (IAA) 0.33 >More info 0.55 >More info Col (IAA) Original data GEO bulk
408 C24-1h IAA 0.63 >More info 0.25 >More info C24-0h IAA whole plant Original data GEO bulk
409 gpa1 -ABA LF 0.51 >More info 0.37 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
410 nas4x leaves - Fe -0.38 >More info -0.50 >More info WT leaves - Fe Leaves Original data GEO bulk
411 Col leaves 48h LT 0.56 >More info 0.31 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
412 E.orontii Infection 3 day 0.34 >More info 0.53 >More info Uninfection 3 day Original data Elicitor treatments
413 seedling 24h after HZE atm-1 0.52 >More info 0.35 >More info seedling day 2 unirradiated atm-1 24h Original data
414 pad2-PsmES4326-24hpi -0.52 >More info -0.35 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
415 Light 3day wt -0.52 >More info -0.35 >More info 0h wt Original data
416 rid4 IBA -0.37 >More info -0.50 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
417 Col whole leaf amplified 5 dpi 0.54 >More info 0.32 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
418 nia1nia2noa1-2 0.52 >More info 0.34 >More info Col-0 whole seedlings Original data GEO bulk
419 K starvation (root) 0.34 >More info 0.52 >More info Ws (root) Original data GEO bulk
420 Root -K 0.34 >More info 0.52 >More info Control-root Original data GEO bulk
421 shoot-10 μM DEX- 6 hr 0.50 >More info 0.36 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
422 15m.KCl 0.51 >More info 0.35 >More info To. KCl 14 day old Roots Original data GEO bulk
423 agb1 gpa1 -ABA LF 0.26 >More info 0.60 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
424 JA 3h -0.26 >More info -0.60 >More info EtOH 3h 3hr Original data GEO bulk
425 WT NAA 1h 0.53 >More info 0.32 >More info WT 0h Leaf tissue Original data GEO bulk
426 Light 0.52 >More info 0.33 >More info Control Original data GEO bulk
427 anti-sense for AtAOX1a 0.52 >More info 0.33 >More info WT Original data GEO bulk
428 root longitudinal zone-4 NaCl 0.34 >More info 0.51 >More info root longitudinal zone-4 Original data GEO bulk
429 3x(m) 0.18 >More info 0.67 >More info 2x two week old seedlings Original data
430 npr1 sni1 ssn2 SA -0.50 >More info -0.35 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
431 leaf chr11-1chr17-1 0.51 >More info 0.33 >More info leaf Col-0 leaves Original data GEO bulk
432 root longitudinal zone-3 -Fe 0.32 >More info 0.52 >More info root longitudinal zone-3 standard Original data GEO bulk
433 WT roots - Fe 0.57 >More info 0.27 >More info WT roots + Fe Roots Original data GEO bulk
434 penta Control 0.51 >More info 0.32 >More info Laer Control leaf discs Original data GEO bulk
435 Heat shock optimum 0.18 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
436 cat2-short-day 2d 0.19 >More info 0.64 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
437 toc1-1-77hr 0.55 >More info 0.27 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
438 cat2-hCO2 -0.52 >More info -0.30 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
439 root columella root cap pH4.6 0.52 >More info 0.30 >More info root columella root cap pH5.7 Original data GEO bulk
440 Elevated CO2 expanding leaf 0.50 >More info 0.32 >More info Ambient CO2 expanding leaf expanding leaf Original data
441 CDB1-Knockout -0.31 >More info -0.51 >More info WT Original data GEO bulk
442 Bay-0-30min IAA 0.62 >More info 0.19 >More info Bay-0-0h IAA whole plant Original data GEO bulk
443 exo70A1 0.50 >More info 0.31 >More info Col-0 whole plant Original data GEO bulk
444 TaFLS overexpression line (OE2) -0.52 >More info -0.29 >More info Col-0 Rosette leaves Original data
445 axr2-BR -0.53 >More info -0.28 >More info BR BR dark-grown seedlings Original data GEO bulk
446 SAM SE agl15 agl18 double mutant 0.31 >More info 0.50 >More info SAM SE Col Original data GEO bulk
447 Root wt CLE10 0.25 >More info 0.56 >More info Root wt CLE25 root tip Original data GEO bulk
448 gun4-1 0.29 >More info 0.52 >More info WT Col-0 seedling Original data GEO bulk
449 dark-hs 0.30 >More info 0.51 >More info dark-control seedling Original data
450 atgsnor1-1 -0.60 >More info -0.21 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
451 WT 1wk -P 0.56 >More info 0.24 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
452 wnk8-1 untreated -0.24 >More info -0.56 >More info Col-0 untreated seedlings Original data GEO bulk
453 irradiated leaf (cmt 1d) 0.61 >More info 0.18 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
454 atmospheric CO2 high Mg shoot 0.51 >More info 0.28 >More info atmospheric CO2 normal Mg shoot Shoot Original data
455 root hypoxia total 0.50 >More info 0.29 >More info root control total Original data GEO bulk
456 tfl1-1-16ºC 0.29 >More info 0.50 >More info WT-16ºC Original data GEO bulk
457 4h decapitation -0.27 >More info -0.52 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
458 cys-c1 root -0.51 >More info -0.27 >More info Root-WT roots Original data GEO bulk
459 vtc2-1 -0.55 >More info -0.23 >More info Col-0 whole plant Original data GEO bulk
460 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.53 >More info 0.25 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
461 Ibuprofen 3 h 0.12 >More info 0.66 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
462 Anoxia 0.27 >More info 0.51 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
463 bak1-3 +Pep2 2h 0.24 >More info 0.54 >More info WT +Pep2 2h Pep2 Original data GEO bulk
464 Elevated CO2 fully expanded leaf 0.54 >More info 0.23 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
465 csn4-1 dark 0.56 >More info 0.21 >More info WT light Original data GEO bulk
466 root longitudinal zone-4 low sulfur -0.25 >More info -0.52 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
467 high-R:FR bud axillary -0.21 >More info -0.56 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
468 opr3 OPDA 0.5 h 0.19 >More info 0.58 >More info opr3 0 h Original data GEO bulk
469 treated group 0.25 >More info 0.52 >More info Control group Original data
470 pnp1-1 1wk -P 0.54 >More info 0.22 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
471 ein3 eil1 0.58 >More info 0.18 >More info Col-0 mock Whole seedling Original data GEO bulk
472 Bur-0-1h IAA 0.52 >More info 0.24 >More info Bur-0h IAA whole plant Original data GEO bulk
473 Laer pretreat GA Flg22 0h 0.58 >More info 0.17 >More info Laer pretreat water control leaf discs Original data GEO bulk
474 TaFLS overexpression line (OE1) -0.51 >More info -0.24 >More info Col-0 Rosette leaves Original data
475 calcicole ecotype Cal-0 0.61 >More info 0.13 >More info Col-4 1 mM CaCl2 Original data GEO bulk
476 shoots WT 0uM Fe 0.52 >More info 0.22 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
477 -Sulfate 2 h 0.51 >More info 0.23 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
478 WT leaves - Fe 0.53 >More info 0.21 >More info WT leaves + Fe Leaves Original data GEO bulk
479 gabaculin 0.15 >More info 0.59 >More info WT Col-0 seedling Original data GEO bulk
480 Heat and anoxia 0.22 >More info 0.51 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
481 sng1 0.10 >More info 0.63 >More info WT aerial region Original data GEO bulk
482 AsAKiin11 T2 0.19 >More info 0.54 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
483 penta MeJA 1h 0.64 >More info 0.07 >More info Laer MeJA 1h leaf discs Original data GEO bulk
484 WT resupplied Pi 4h 0.53 >More info 0.18 >More info WT complete seedlings Original data
485 Col-0 DCA 6d 0.56 >More info 0.13 >More info Col-0 MOCK 6d Original data GEO bulk
486 prors1-2 leaves 0.56 >More info 0.13 >More info Col-0 leaves leaves Original data
487 CMV-A2b mutant 0.56 >More info 0.13 >More info Mock-At Aerial tissues Original data GEO bulk
488 Col-0 HS 0.13 >More info 0.56 >More info Col-0 control heat shocked seedling Original data GEO bulk
489 WT (Col-0) heat shock 0.13 >More info 0.56 >More info WT (Col-0) whole seedling Original data GEO bulk
490 HairpinZ 4 h (leaf) 0.72 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
491 Col-0 +ABA LF 0.16 >More info 0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
492 triploid female excess -0.13 >More info -0.54 >More info tetraploid Original data GEO bulk
493 pnp1-1 1wk +P 0.50 >More info 0.16 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
494 SA Treated 0.58 >More info 0.08 >More info Water Original data GEO bulk
495 Root -P -0.50 >More info -0.14 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
496 GO5; 0h switch to ambient CO2 concentrations; -0.61 >More info -0.03 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
497 MPK6 ox Shoot Hypoxia 0.53 >More info 0.11 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
498 Atwrky63 -0.54 >More info -0.09 >More info Col0 none leaf Original data GEO bulk
499 Col-0 wt Hypoxic 0.54 >More info 0.09 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
500 pollinated pop2-1 flowers -0.52 >More info -0.11 >More info pollinated WT flowers flowers Original data GEO bulk
501 ABA SA 24h 0.06 >More info 0.56 >More info EtOH 24h 24hr Original data GEO bulk
502 vte2 leaves 120h LT 0.58 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
503 IAA Treated -0.51 >More info -0.10 >More info Negative Control Original data GEO bulk
504 Red/FR Light45min -0.16 >More info 0.77 >More info FarRed Light 45min Original data Light treatments
505 inhibitor B Treated 0.09 >More info 0.51 >More info Negative Control Original data GEO bulk
506 ckh2 CK25 0.50 >More info 0.09 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
507 Col0 roots 2hr KNO3 nitrogen -0.06 >More info -0.52 >More info Col0 roots 2hr KCl control root Original data GEO bulk
508 seedling 3h after HZE WT 0.55 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
509 Total RNA 35S:HF-RPL18 0.53 >More info 0.04 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
510 Col PSTDC3000 24h 0.67 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
511 pvip1 pvip2 seedling 0.56 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
512 T6 leaf-drought 0.04 >More info 0.50 >More info T6 leaf-well watered Original data GEO bulk
513 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
514 FLIGHT TAGESB plate 0.51 >More info 0.01 >More info GROUND CONTROL TAGESB plate Original data
515 glk1 glk2 GLK1-GR +DEX 24h -0.63 >More info 0.11 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
516 abi4-102 (I) 0.52 >More info -0.02 >More info Col (I) rosette Original data GEO bulk
517 bri1-116 -0.26 >More info 0.73 >More info Col seedling Original data GEO bulk
518 P. infestans 6 h (leaf) 0.61 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
519 root longitudinal zone-3 pH 4.6 -0.11 >More info 0.57 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
520 WT zebularine 5d -0.57 >More info 0.14 >More info WT mock 5d shoot apical meristem Original data
521 seed germinating in countinuous light 24h SL -0.27 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
522 aux1 mutant roots ethylene -0.10 >More info 0.50 >More info roots air Original data GEO bulk
523 Shoot apex inflorescence (after bolting) -0.30 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
524 cat2-short-day 4d -0.24 >More info 0.54 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk