4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on seedlings +5AC
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List of experiments correlated with "seedlings +5AC"  Help Download transcriptome of top 30
Score Experiment Correlation from
seedlings +5AC		 Correlation to
seedlings +5AC		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 seedlings +5AC 1.00 >More info 1.00 >More info control seedlings 10-day old whole seedling Original data GEO bulk
2 csn5 (csn5a-2 csn5b) light 0.73 >More info 0.71 >More info WT light Original data GEO bulk
3 LTN008-2 aza-dc 0.72 >More info 0.71 >More info LTN012-2 Mock Original data
4 BLM+INA 0.63 >More info 0.71 >More info CK BLM and INA seedling Original data
5 csn3-1 light 0.69 >More info 0.64 >More info WT light Original data GEO bulk
6 DFPM 0.61 >More info 0.69 >More info control Original data GEO bulk
7 seedlings + TSA 0.63 >More info 0.66 >More info control seedlings 10-day old whole seedling Original data GEO bulk
8 irradiated leaf (WT 1d) 0.40 >More info 0.88 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
9 SA 0.55 >More info 0.72 >More info WT mock Whole seedling Original data GEO bulk
10 ARR21C-ox 0.69 >More info 0.57 >More info Col-0 Original data ARR21C overexpression
11 toc1-1-49hr 0.62 >More info 0.63 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
12 bak1-3 +Pep2 10h 0.58 >More info 0.67 >More info WT +Pep2 10h Pep2 Original data GEO bulk
13 toc1-1-53hr 0.57 >More info 0.68 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
14 toc1-1-57hr 0.56 >More info 0.68 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
15 AgNO3 3 h 0.51 >More info 0.72 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
16 clf-28 swn-7 0.58 >More info 0.64 >More info Col whole plant Original data GEO bulk
17 ABA DFPM 0.61 >More info 0.61 >More info control Original data GEO bulk
18 toc1-1-81hr 0.48 >More info 0.74 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
19 ice1 control 0.65 >More info 0.56 >More info WT control Original data GEO bulk
20 hira-root -0.55 >More info -0.66 >More info WT-root root Original data
21 Sulfometuron EC50 0.54 >More info 0.67 >More info Carrier Original data GEO bulk
22 cpr5npr1 0.47 >More info 0.74 >More info WT(COL) Original data GEO bulk
23 35S:RPS4 eds1-2 24h -0.52 >More info -0.68 >More info 35S:RPS4 24h leaves Original data
24 Nicotinamide-81hr 0.63 >More info 0.57 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
25 Primisulfuron EC50 0.54 >More info 0.64 >More info Carrier (primisulfuron) Original data GEO bulk
26 BLM 0.56 >More info 0.62 >More info CK BLM seedling Original data
27 S15-118 0.38 >More info 0.80 >More info wt Original data GEO bulk
28 oas-a1.1 Cd 18h 0.46 >More info 0.72 >More info Cd 18h root Root Original data GEO bulk
29 Cor 10h 0.45 >More info 0.73 >More info Mock 10h Cor Original data GEO bulk
30 ddm1 mutant seedlings 0.39 >More info 0.78 >More info control seedlings 10-day old whole seedling Original data GEO bulk
31 Chemically 0.42 >More info 0.75 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
32 RPL18 TuMV inoculated polysomal RNA 0.51 >More info 0.65 >More info mock inoculated polysomal RNA PO Original data GEO bulk
33 P.p 10.5hai 0.55 >More info 0.61 >More info At-Control roots Original data GEO bulk
34 CMP 24hr 0.51 >More info 0.65 >More info Acetone 24hr root Original data GEO bulk
35 csn4-1 dark 0.65 >More info 0.51 >More info WT light Original data GEO bulk
36 Cycloheximide 3 h 0.49 >More info 0.67 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
37 Chitosan 3h Treatment 0.58 >More info 0.58 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
38 P.p 30hai 0.61 >More info 0.54 >More info At-Control roots Original data GEO bulk
39 TNT-seedlings 0.39 >More info 0.76 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
40 Col ozone 2d 0.48 >More info 0.67 >More info Col clean-air 2d ozone Original data GEO bulk
41 ice1 6H Cold 0.64 >More info 0.50 >More info WT 6H Cold Original data GEO bulk
42 GA4 3 h (ga1 seed) 0.60 >More info 0.54 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
43 IMI 4mM 0.47 >More info 0.67 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
44 efr-1 +elf18 10h -0.49 >More info -0.65 >More info WT +elf18 10h elf18 Original data GEO bulk
45 ABA control 0.46 >More info 0.68 >More info No ABA control Original data GEO bulk
46 seedling 3h after Gamma WT 0.36 >More info 0.78 >More info seedling day 1 unirradiated WT 3h Original data
47 5-Triiodobenzoic acid3 h 0.46 >More info 0.67 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
48 Imidazolinone EC50 0.52 >More info 0.61 >More info Carrier (Imidazolinone) Original data GEO bulk
49 toc1-1-65hr 0.55 >More info 0.58 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
50 E2Fa-Dpa 0.59 >More info 0.54 >More info WT Original data GEO bulk
51 CMP 4hr 0.54 >More info 0.59 >More info Acetone 4hr root Original data GEO bulk
52 WT 30μM arsenate 8 hours. 0.52 >More info 0.61 >More info WT control (not supplemented). Original data
53 R. solani AG8 0.50 >More info 0.63 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
54 cpr5scv1 0.42 >More info 0.71 >More info WT(COL) Original data GEO bulk
55 toc1-1-61hr 0.54 >More info 0.58 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
56 Col whole leaf 7dpi 0.47 >More info 0.65 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
57 cpr5 0.45 >More info 0.67 >More info WT(COL) Original data GEO bulk
58 seedlings-week-old RECA1-overexpressing
transgenic		 0.47 >More info 0.65 >More info seedlings-week-old Col-0 seedlings Original data
59 CMV-WT 0.45 >More info 0.66 >More info Mock-At Aerial tissues Original data GEO bulk
60 Nicotinamide-85hr 0.58 >More info 0.53 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
61 ice1 3H Cold 0.61 >More info 0.50 >More info WT 3H Cold Original data GEO bulk
62 toc1-1-77hr 0.62 >More info 0.49 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
63 erf5 erf6 -0.51 >More info -0.60 >More info WT+water water seedlings Original data GEO bulk
64 iae1 -0.52 >More info -0.59 >More info B179 Original data GEO bulk
65 upf3 0.48 >More info 0.63 >More info WT whole plant Original data GEO bulk
66 RPL18 TuMV inoculated total RNA 0.47 >More info 0.64 >More info mock inoculated total RNA PO Original data GEO bulk
67 P.p 6hai 0.57 >More info 0.53 >More info At-Control roots Original data GEO bulk
68 Mutant siz1-3 (Drought) 0.51 >More info 0.59 >More info Col-0 (Drought) Original data GEO bulk
69 siz1-3 drought 0.51 >More info 0.59 >More info Col-0 drought Original data GEO bulk
70 toc1-1-85hr 0.49 >More info 0.61 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
71 smg5-2 0.46 >More info 0.64 >More info WT whole plant Original data GEO bulk
72 anac017-2 AntimycinA 3h -0.48 >More info -0.62 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
73 sta1 0.48 >More info 0.62 >More info WT Original data GEO bulk
74 sni1 0.43 >More info 0.67 >More info WT Original data GEO bulk
75 cpr5 0.45 >More info 0.64 >More info WT seedling Original data GEO bulk
76 35S:RPS4 eds1-2 8h -0.44 >More info -0.65 >More info 35S:RPS4 8h leaves Original data
77 irradiated leaf (cmt 1d) 0.37 >More info 0.72 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
78 Triazolopyrimidine EC50 0.52 >More info 0.56 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
79 Octopus overexpressor 35SDYG25 0.45 >More info 0.63 >More info WS Original data GEO bulk
80 eds16 whole leaf 5dpi -0.40 >More info -0.68 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
81 9 hr Hypoxia 1 hr recovery Total RNA 0.47 >More info 0.61 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
82 Col BTH 0.40 >More info 0.67 >More info Col rosettes Original data GEO bulk
83 Phytoprostane A1 4 h 0.47 >More info 0.60 >More info Col-0 Original data GEO bulk
84 Laer treat paclobutrazol (PAC) 0.48 >More info 0.59 >More info Laer Control leaf discs Original data GEO bulk
85 ice1 24H Cold 0.51 >More info 0.55 >More info WT 24H Cold Original data GEO bulk
86 Nicotinamide-53hr 0.57 >More info 0.49 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
87 coi1-2 0.42 >More info 0.64 >More info Col-0 mock Whole seedling Original data GEO bulk
88 SLWF infested 0.42 >More info 0.64 >More info SLWF uninfested rosette tissue Original data GEO bulk
89 seedling 1.5h after Gamma WT 0.47 >More info 0.59 >More info seedling day 1 unirradiated WT 1.5h Original data
90 Col0-PsmES4326-24hpi 0.44 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
91 smg7b-1 0.39 >More info 0.66 >More info WT whole plant Original data GEO bulk
92 WT-SA 0.43 >More info 0.62 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
93 pepr1-1 Pepr2-3 +Pep2 2h -0.44 >More info -0.61 >More info WT +Pep2 2h Pep2 Original data GEO bulk
94 aba3-1 0.34 >More info 0.71 >More info wt Original data GEO bulk
95 embryo paclobutrazol 0.53 >More info 0.51 >More info embryo-control paclobutrazol embryo Original data GEO bulk
96 Col whole leaf 5dpi 0.41 >More info 0.63 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
97 Laer pretreat GA Flg22 1h 0.33 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
98 cpr5npr1svi1 0.38 >More info 0.66 >More info WT(COL) Original data GEO bulk
99 del1-1 mutant 5d uninfected 0.42 >More info 0.62 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
100 P.p 2.5hai 0.52 >More info 0.51 >More info At-Control roots Original data GEO bulk
101 Nicotinamide-73hr 0.50 >More info 0.53 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
102 Nicotinamide-57hr 0.58 >More info 0.45 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
103 Mutant siz1-3 0.44 >More info 0.59 >More info Col-0 Original data GEO bulk
104 ataf1-1 mutant Col-0 Bgh inoculated 0.42 >More info 0.61 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
105 Col-0 INA 48h 0.36 >More info 0.67 >More info Col-0 MOCK 48h Original data GEO bulk
106 col-5 hrpA 12h 0.40 >More info 0.63 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
107 col-5 DC3000 12h 0.41 >More info 0.62 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
108 siz1-3 control 0.44 >More info 0.59 >More info Col-0 control Original data GEO bulk
109 cop1 Seedling BL 0.39 >More info 0.64 >More info WT Seedling BL Original data GEO bulk
110 K starvation (shoot) 0.42 >More info 0.60 >More info Ws (shoot) Original data GEO bulk
111 pad4-PsmES4326-24hpi -0.45 >More info -0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
112 sid2 -0.39 >More info -0.63 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
113 toc1-1-73hr 0.41 >More info 0.61 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
114 Shoot -K 0.42 >More info 0.60 >More info Control-shoot Original data GEO bulk
115 Nicotinamide-61hr 0.54 >More info 0.47 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
116 Salicylic Acid 3 h 0.49 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
117 UV Stress 24 h (shoot) 0.40 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
118 Fe starvation 72 h 0.38 >More info 0.63 >More info Control Original data GEO bulk
119 whole roots -Fe 72 hour 0.38 >More info 0.63 >More info whole roots standard Original data GEO bulk
120 R. solani AG2-1 0.42 >More info 0.59 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
121 pepr1-1 Pepr2-3 +Pep2 10h -0.48 >More info -0.53 >More info WT +Pep2 10h Pep2 Original data GEO bulk
122 0.125 mM gold 24 h 0.47 >More info 0.54 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
123 whole roots 140 mM NaCl 1 hour 0.39 >More info 0.62 >More info whole roots standard Original data GEO bulk
124 S58-2 0.38 >More info 0.63 >More info wt Original data GEO bulk
125 root Dosed gold 0.47 >More info 0.54 >More info root No gold .125 mM gold 24 h roots Original data
126 8-DAC chr11-1chr17-1 0.47 >More info 0.54 >More info 8-DAC Col-0 leaf explants Original data
127 AvrRpt2 Col-0 6hpi 0.43 >More info 0.58 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
128 Ovary 0.55 >More info 0.45 >More info Seedling Original data GEO bulk
129 mkk1/mkk2 control rep 0.44 >More info 0.56 >More info Col-0 Time 0 rep Original data GEO bulk
130 mkk1/mkk2 24h BTH rep 0.42 >More info 0.58 >More info Col-0 24h BTH rep Original data GEO bulk
131 HopZ1a treated 0.41 >More info 0.59 >More info col Original data GEO bulk
132 6h +Pi -0.37 >More info -0.63 >More info 6h -Pi root Original data GEO bulk
133 bio4-1 mutant watered00µM biotin leaves -0.29 >More info -0.71 >More info bio4-1 mutant leaves leaves Original data GEO bulk
134 sid2-1 cold -0.38 >More info -0.62 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
135 Shoot -Cs 0.37 >More info 0.63 >More info Control-shoot Original data GEO bulk
136 Elevated CO2 AMPLE N DAY 0.33 >More info 0.67 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
137 Stigma 0.59 >More info 0.40 >More info Seedling Original data GEO bulk
138 nia1nia2 0.53 >More info 0.46 >More info Col-0 whole seedlings Original data GEO bulk
139 downy mildew cotyledons late stage 0.33 >More info 0.66 >More info mock inoculated Cotyledons Original data GEO bulk
140 UV 0.47 >More info 0.52 >More info WT aerial region Original data GEO bulk
141 dicamba 0.41 >More info 0.58 >More info WT mock whole seedling Original data GEO bulk
142 gh3.5-1D 48 hpi 0.45 >More info 0.54 >More info Col-0 uninoculated Original data GEO bulk
143 WT chitooctaose 0.43 >More info 0.56 >More info WT water Original data GEO bulk
144 npr1-1 SA -0.42 >More info -0.57 >More info Col-0 SA complete seedling Original data
145 chito-octamer 0.43 >More info 0.55 >More info Col Mock Original data GEO bulk
146 WT +elf18 10h 0.45 >More info 0.53 >More info WT untreated elf18 Original data GEO bulk
147 WT powdery mildew 0.38 >More info 0.60 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
148 gul2-1 mutant 0.44 >More info 0.54 >More info WT 7 day-old whole seedlings Original data
149 nia1nia2noa1-2 0.53 >More info 0.44 >More info Col-0 whole seedlings Original data GEO bulk
150 Light 3day wt -0.32 >More info -0.65 >More info 0h wt Original data
151 vtc1 (II) 0.41 >More info 0.56 >More info Col (II) rosette Original data GEO bulk
152 Ws HS 0.42 >More info 0.55 >More info Ws control heat shocked seedling Original data GEO bulk
153 Cor hrpS 10h 0.39 >More info 0.58 >More info Mock 10h Cor hrpS Original data GEO bulk
154 Col-0 under 4 days salt 0.42 >More info 0.55 >More info Col-0 under control 4 days salt treatment rosette Original data
155 CeO2 germinant -0.30 >More info -0.67 >More info Millipore Water germinant CeO2 seedling Original data
156 WT seedlings MV 0.40 >More info 0.56 >More info WT seedlings control Seedlings Original data GEO bulk
157 plant (tga2-5-6) 4h phytoprostane A1 0.36 >More info 0.60 >More info plant (tga2-5-6) 4h control Original data GEO bulk
158 WT-16ºC -0.41 >More info -0.55 >More info WT-23ºC Original data GEO bulk
159 ORS1 induced 0.25 >More info 0.71 >More info mock-induced rosette leaves Original data GEO bulk
160 OH1 0.38 >More info 0.58 >More info Col-0 leaves Original data GEO bulk
161 4C 1h 0.38 >More info 0.58 >More info 4C 0h Original data GEO bulk
162 Botrytis cinerea 48h 0.42 >More info 0.54 >More info control 48h Original data GEO bulk
163 Elevated CO2 AMPLE N NIGHT 0.36 >More info 0.60 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
164 apum23 0.39 >More info 0.56 >More info WT (Col-3) aerial parts Original data GEO bulk
165 WT+H2O2 0.39 >More info 0.56 >More info WT H2O2 Original data GEO bulk
166 Cocultivation 8 hrs root 0.40 >More info 0.55 >More info Mock cocultivation 8 hrs root Root Original data
167 Bur-0-3h IAA 0.41 >More info 0.54 >More info Bur-0h IAA whole plant Original data GEO bulk
168 E.coli TUV86 2 fliC 7h 0.38 >More info 0.57 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
169 seedling 6h after HZE WT 0.41 >More info 0.54 >More info seedling day 1 unirradiated WT 6h Original data
170 Wounding Stress3 h (root) -0.43 >More info -0.51 >More info Stress mock 3 h (root) Original data Stress treatments
171 B.cinerea 18 h infection 0.41 >More info 0.53 >More info Mock 18 h Original data Botrytis cinerea infection
172 inhibitor A Treated 0.35 >More info 0.59 >More info Negative Control Original data GEO bulk
173 Botrytis cinerea 18h 0.41 >More info 0.53 >More info control 18h Original data GEO bulk
174 9 hr Hypoxia Total RNA 0.42 >More info 0.52 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
175 Osmotic Stress 24 h (shoot) 0.39 >More info 0.54 >More info Stress mock 24 h (shoot) Original data Stress treatments
176 Oxidative Stress 3 h (root) -0.40 >More info -0.53 >More info Stress mock 3 h (root) Original data Stress treatments
177 Norflurazon 0.38 >More info 0.55 >More info Col-0 Original data GEO bulk
178 Norflurazon 0.38 >More info 0.55 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
179 cdpk6-yfp 0.37 >More info 0.56 >More info Kan seedlings Original data GEO bulk
180 IAA/inhibitor B Treated 0.33 >More info 0.60 >More info IAA Treated Original data GEO bulk
181 whole roots 140 mM NaCl 30 minutes 0.36 >More info 0.57 >More info whole roots standard Original data GEO bulk
182 seedlings protease IV 0.36 >More info 0.57 >More info seedlings nontreated control whole seedling Original data
183 Whole root - low pH 24H 0.39 >More info 0.53 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
184 (Col-0)+200 uM As 0.40 >More info 0.52 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
185 INA 0.27 >More info 0.65 >More info CK INA seedling Original data
186 whole roots -Fe 48 hour 0.32 >More info 0.60 >More info whole roots standard Original data GEO bulk
187 WT 3h -P 0.31 >More info 0.61 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
188 PAHs stress 0.32 >More info 0.60 >More info exp control phenanthrene whole plants Original data GEO bulk
189 Whole root - low pH 12H 0.33 >More info 0.59 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
190 A6 mutant 0.34 >More info 0.58 >More info WT rosette leaves Rosette leaves Original data GEO bulk
191 aox1a:rpoTmp untreated 0.35 >More info 0.57 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
192 HopZ1a treated ulp1c ulp1d 0.40 >More info 0.51 >More info col Original data GEO bulk
193 hni9 high nitrogen 0.39 >More info 0.52 >More info WT high nitrogen roots Original data GEO bulk
194 edr1 18 h powdery mildew 0.37 >More info 0.54 >More info Col-0 18 h powdery mildew Original data GEO bulk
195 Nicotinamide-65hr 0.50 >More info 0.41 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
196 Mutant axr3-1 0.34 >More info 0.56 >More info Col Original data GEO bulk
197 Leafminer damaged seedlings 0.34 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
198 Salt Stress 24 h (root) 0.38 >More info 0.52 >More info Stress mock 24 h (root) Original data Stress treatments
199 eds16 whole leaf 7dpi -0.35 >More info -0.55 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
200 WT-NOCO2 INFECTED 0.37 >More info 0.53 >More info WT-MOCK Original data GEO bulk
201 9m.KCl 0.39 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
202 pmr4-1 powdery mildew 0.28 >More info 0.62 >More info WT powdery mildew uninoculated Original data GEO bulk
203 E.coli 0157 H7 7h 0.39 >More info 0.51 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
204 Col-0 48 hpi 0.37 >More info 0.53 >More info Col-0 uninoculated Original data GEO bulk
205 35S:RPS4 eds1-2 2h -0.23 >More info -0.67 >More info 35S:RPS4 2h leaves Original data
206 sicy-192 cotyledons 0.25 >More info 0.65 >More info WT cotyledons cotyledons Original data
207 D2O 0.33 >More info 0.56 >More info H2O seedling Original data GEO bulk
208 Col-0 HS 0.34 >More info 0.55 >More info Col-0 control heat shocked seedling Original data GEO bulk
209 camta2/3 warm 0.34 >More info 0.55 >More info WT warm entire aerial part Original data GEO bulk
210 WT (Col-0) heat shock 0.34 >More info 0.55 >More info WT (Col-0) whole seedling Original data GEO bulk
211 ceh1 mutant 0.34 >More info 0.55 >More info Parent line Original data
212 Phaseolicola 2 h (leaf) 0.35 >More info 0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
213 npr1-3 DCA 48h 0.28 >More info 0.61 >More info npr1-3 MOCK 48h Original data GEO bulk
214 Cor 24h 0.39 >More info 0.50 >More info Mock 24h Cor Original data GEO bulk
215 CHS-silenced type -0.38 >More info -0.51 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
216 pmr5 pmr6 0.38 >More info 0.51 >More info Col-0 Original data GEO bulk
217 Differentiation 12h 0.36 >More info 0.53 >More info Differentiation 0h leaves Original data
218 Selenate (root) 0.34 >More info 0.54 >More info Ws (root) Original data GEO bulk
219 Stem tissue 5 days NAA 0.33 >More info 0.55 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
220 35:SUB1A 0.33 >More info 0.55 >More info WT whole seedling Original data GEO bulk
221 camta1/3 warm 0.32 >More info 0.56 >More info WT warm entire aerial part Original data GEO bulk
222 Root Selenate 0.34 >More info 0.54 >More info Root control 40 micromolar selenate Root Original data GEO bulk
223 penta Pst DC3000 12hpi 0.35 >More info 0.53 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
224 lht1 untreated 0.37 >More info 0.51 >More info WT untreated untreated leaf Original data GEO bulk
225 root longitudinal zone-4 pH 4.6 0.28 >More info 0.60 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
226 oligomycin 4 h 0.36 >More info 0.52 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
227 seedling 24h after HZE WT 0.17 >More info 0.71 >More info seedling day 2 unirradiated WT 24h Original data
228 Col-0 wt Hypoxic 0.30 >More info 0.58 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
229 erf104-ko Flg22 4h 0.33 >More info 0.54 >More info erf104-ko H2O 4h Original data GEO bulk
230 Col-0 low oxygen 0.31 >More info 0.56 >More info Col-0 control low oxygen root Original data GEO bulk
231 Col upon hypoxia 6 hrs 0.36 >More info 0.51 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
232 GA 0.25 >More info 0.62 >More info none GA Rosette Original data GEO bulk
233 WT 2-4h Xanthomonas 0.30 >More info 0.57 >More info WT T0 Original data GEO bulk
234 WT Seedling BL+ABA 0.31 >More info 0.55 >More info WT Seedling BL Original data GEO bulk
235 flu over-tAPX 0.27 >More info 0.59 >More info WT Col Original data GEO bulk
236 cat2-hCO2 -0.36 >More info -0.50 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
237 hrpA 7h 0.36 >More info 0.50 >More info Mock 7h hrpA Original data GEO bulk
238 Nicotinamide-89hr 0.51 >More info 0.34 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
239 15m.KCl 0.28 >More info 0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
240 root hypoxia total 0.31 >More info 0.53 >More info root control total Original data GEO bulk
241 Col whole leaf amplified 5 dpi 0.29 >More info 0.55 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
242 35S::PI ap3-3 35S::AP-GR +DEX 0.30 >More info 0.54 >More info 0hr DEX Original data GEO bulk
243 seedling 24h after HZE atm-1 0.25 >More info 0.59 >More info seedling day 2 unirradiated atm-1 24h Original data
244 Nicotinamide-49hr 0.50 >More info 0.33 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
245 flu 0.30 >More info 0.53 >More info WT Col Original data GEO bulk
246 1h +Pi -0.32 >More info -0.51 >More info 1h -Pi root Original data GEO bulk
247 Col-Luc WT 3h antimycin A 0.27 >More info 0.56 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
248 pmr4-1 control 0.32 >More info 0.51 >More info WT control uninoculated Original data GEO bulk
249 35S::LFY 0.27 >More info 0.56 >More info Landsberg erecta seedlings Original data GEO bulk
250 Col-0 9 hpi A. brassicicola 0.32 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
251 bHLH122 ox -0.26 >More info -0.57 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
252 WT Col-0 Bgh inoculated 0.29 >More info 0.53 >More info WT Col-0 Un-inoculated Original data GEO bulk
253 8hr-pH4.5 0.27 >More info 0.55 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
254 cs26 short-day -0.32 >More info -0.50 >More info Leaves-WT-SD leaf Original data GEO bulk
255 OE WRKY63.3 high light 0.30 >More info 0.52 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
256 DC3000 7h 0.28 >More info 0.54 >More info Mock 7h DC3000 Original data GEO bulk
257 sicy-192 gun1-101 cotyledons 0.29 >More info 0.53 >More info WT cotyledons cotyledons Original data
258 Mutant axr3-1 (IAA) 0.24 >More info 0.58 >More info Col (IAA) Original data GEO bulk
259 npr1 sni1 brca2a SA -0.23 >More info -0.59 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
260 wavy 0.21 >More info 0.61 >More info WT Original data GEO bulk
261 Salt Stress 24 h (shoot) 0.31 >More info 0.50 >More info Stress mock 24 h (shoot) Original data Stress treatments
262 camta3-2 0.30 >More info 0.51 >More info WT Original data GEO bulk
263 eds16 whole leaf 1dpi -0.18 >More info -0.63 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
264 rosette Dark Wounded 0.30 >More info 0.51 >More info rosette Dark Control Original data GEO bulk
265 npr1-PsmES4326-24hpi -0.31 >More info -0.50 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
266 Compost 0.30 >More info 0.51 >More info Perlite Compost Original data GEO bulk
267 Col-0 norflurazon 0.22 >More info 0.59 >More info Col-0 control Original data GEO bulk
268 eds16 whole leaf 6hpi -0.29 >More info -0.51 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
269 WT in -N 0.27 >More info 0.53 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
270 eds16 whole leaf 3dpi -0.22 >More info -0.58 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
271 Col-0 V. longisporum-inoculated 48 hpi 0.21 >More info 0.59 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
272 pil5 red light 0.26 >More info 0.53 >More info Col-0 red light Original data GEO bulk
273 camta1/2/3 warm 0.29 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
274 nar1-4/- 0.29 >More info 0.50 >More info WT whole seedling Original data GEO bulk
275 gh3.5D uninoculated -0.29 >More info -0.50 >More info Col-0 48 hpi Original data GEO bulk
276 vte2-1 3d vernalization 0.21 >More info 0.58 >More info WT 3d vernalization Original data GEO bulk
277 eds16 whole leaf 7d UI -0.23 >More info -0.55 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
278 Stem tissue 2 days NAA 0.14 >More info 0.64 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
279 chito-tetramer 0.24 >More info 0.54 >More info Col Mock Original data GEO bulk
280 bak1-3 +Pep2 2h 0.27 >More info 0.51 >More info WT +Pep2 2h Pep2 Original data GEO bulk
281 Heat shock optimum 0.12 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
282 gun1gun5 far-red pretreated -0.26 >More info -0.51 >More info WT far-red pretreated Original data GEO bulk
283 root protoplasts 40 mM NaCl 0.24 >More info 0.53 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
284 pab polysome 0.22 >More info 0.55 >More info WT polysome seedling shoot/aerial seedling Original data
285 IAA 3 h 0.25 >More info 0.51 >More info Mock 3 h Original data Basic hormone treatment of seedlings
286 Mutant NahG(leaf) -0.24 >More info -0.52 >More info Col-0 (leaf) Original data GEO bulk
287 Tsu-1 -Fe 24h 0.24 >More info 0.52 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
288 Tsu -Fe 24h Roots 0.24 >More info 0.52 >More info Tsu +Fe 24h Roots Original data GEO bulk
289 seedling 12h after HZE WT 0.25 >More info 0.51 >More info seedling day 1 unirradiated WT 12h Original data
290 IAA7mII over-expressor IAA Treated 0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
291 roottip hypoxia total 0.23 >More info 0.52 >More info roottip control total Original data GEO bulk
292 12m.KCl 0.20 >More info 0.55 >More info To. KCl 14 day old Roots Original data GEO bulk
293 rsa3-1 Na 24h 0.16 >More info 0.59 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
294 npr1 sni1 SA 0.20 >More info 0.54 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
295 bri1-116 0.01 >More info 0.73 >More info Col seedling Original data GEO bulk
296 dde2-2 9 hpi A. brassicicola 0.23 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
297 root - 01% oxygen - 2h 0.05 >More info 0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
298 eds16 whole leaf 0h UI -0.20 >More info -0.53 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
299 Root -Cs 0.23 >More info 0.50 >More info Control-root Original data GEO bulk
300 Col-0 DCA 48h 0.17 >More info 0.55 >More info Col-0 MOCK 48h Original data GEO bulk
301 rosette leaves lcr 0.21 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
302 Anoxia 0.19 >More info 0.53 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
303 root endodermis and quiescent center pH4.6 0.20 >More info 0.52 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
304 xyl-grown cell culture- 1h 1mM Suc 0.07 >More info 0.65 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
305 24h light (+Lincomycin) 0.15 >More info 0.56 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
306 ani1 T0.5 -0.16 >More info -0.55 >More info WT T0.5 root tissue Original data GEO bulk
307 Cs shoot -0.12 >More info -0.59 >More info control shoot Original data GEO bulk
308 2hr continuous KNO3 ECR cell 0.14 >More info 0.57 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
309 Col-0 2HS 0.21 >More info 0.50 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
310 seedling 6h after Gamma WT 0.19 >More info 0.52 >More info seedling day 1 unirradiated WT 6h Original data
311 WT Seedling BL -0.17 >More info -0.52 >More info WT Seedling Dark Original data GEO bulk
312 rosette Light Wounded 0.17 >More info 0.51 >More info rosette Light Control Original data GEO bulk
313 myb3 myb3r4d 0.16 >More info 0.52 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
314 abi1 hypocotyl 0.12 >More info 0.56 >More info Ler hypocotyl hypocotyl Original data GEO bulk
315 WT-Dry 0.12 >More info 0.56 >More info WT-CK dehydration treatment 1h Original data
316 E.orontii Infection 3 day 0.14 >More info 0.53 >More info Uninfection 3 day Original data Elicitor treatments
317 long 17-degree- 0.13 >More info 0.54 >More info control long Original data GEO bulk
318 35S:ATR1 like miR -0.11 >More info -0.55 >More info WT for miR Original data GEO bulk
319 oligomycin 1 h 0.08 >More info 0.58 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
320 dorn1-1 Root 100 mM ATP 30 min -0.13 >More info -0.52 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
321 sid2-2 mock -0.10 >More info -0.54 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
322 root - 04% oxygen - 2h -0.03 >More info 0.66 >More info root - 21% oxygen - 2h Original data GEO bulk
323 sid2-2 safener -0.11 >More info -0.51 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
324 WT+chitooctaose 0.03 >More info 0.59 >More info WT+water chitooctaose seedlings Original data GEO bulk
325 ABA SA 24h 0.12 >More info 0.50 >More info EtOH 24h 24hr Original data GEO bulk
326 FLIGHT TAGESB plate6 ROOTS 0.09 >More info 0.53 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
327 SA Treated 0.53 >More info 0.08 >More info Water Original data GEO bulk
328 ddm1-2 0.03 >More info 0.58 >More info Col-0 plant inflorescence Original data
329 WT Root Hypoxia 0.09 >More info 0.51 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
330 2hr transitory KNO3 ECR cell 0.09 >More info 0.51 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
331 siliques AtHb1 control 0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
332 WT 3H Cold 0.06 >More info 0.51 >More info WT control Original data GEO bulk
333 Leaf wounded 0.00 >More info 0.57 >More info Leaf control vegetative leaf Original data GEO bulk
334 root - 08% oxygen - 30min -0.13 >More info 0.67 >More info root - 21% oxygen - 30min Original data GEO bulk
335 root - 08% oxygen - 2h 0.04 >More info 0.50 >More info root - 21% oxygen - 2h Original data GEO bulk
336 Shoot apex inflorescence (after bolting) -0.13 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
337 Genotoxic Stress 3 h (shoot) -0.06 >More info 0.58 >More info Stress mock 3 h (shoot) Original data Stress treatments
338 atmyc2 Seedling BL 0.06 >More info -0.57 >More info WT Seedling BL Original data GEO bulk
339 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
340 rgs1+no sugars 0.01 >More info -0.50 >More info WT+no sugars rosette leaves Original data GEO bulk
341 atm3 0.16 >More info -0.63 >More info Col0 whole plant Original data GEO bulk
342 root - 04% oxygen - 48h -0.08 >More info 0.52 >More info root - 21% oxygen - 48h Original data GEO bulk
343 seed germinating in countinuous light 24h SL -0.25 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
344 root - 04% oxygen - 30min -0.08 >More info 0.50 >More info root - 21% oxygen - 30min Original data GEO bulk