4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on xyl-grown cell culture- 1h 1mM Suc
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List of experiments correlated with "xyl-grown cell culture- 1h 1mM Suc"  Help Download transcriptome of top 30
Score Experiment Correlation from
xyl-grown cell culture- 1h 1mM Suc		 Correlation to
xyl-grown cell culture- 1h 1mM Suc		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 xyl-grown cell culture- 1h 1mM Suc 1.00 >More info 1.00 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
2 xyl-grown cell culture- 1h 1mM Fru 0.81 >More info 0.76 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
3 xyl-grown cell culture- 1h 1mM Glc 0.63 >More info 0.77 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
4 shoot hypoxia p35S 0.64 >More info 0.59 >More info shoot hypoxia total Original data GEO bulk
5 shoot control p35S 0.62 >More info 0.56 >More info shoot control total Original data GEO bulk
6 roottip hypoxia pSCR -0.70 >More info -0.46 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
7 shoot hypoxia pRBCS 0.72 >More info 0.42 >More info shoot hypoxia total Original data GEO bulk
8 35S:ATR1 like miR -0.65 >More info -0.46 >More info WT for miR Original data GEO bulk
9 Night Time Treatment 0.66 >More info 0.44 >More info Night Time Control 1hr white light pulse aerial rosette Original data
10 3x(m) -0.66 >More info -0.44 >More info 2x two week old seedlings Original data
11 35S:MYB28 like miR -0.71 >More info -0.38 >More info WT for miR Original data GEO bulk
12 AFB1 0h -0.64 >More info -0.44 >More info WT 0h Leaf tissue Original data GEO bulk
13 Col-0 DEX Shade -0.78 >More info -0.28 >More info Col-0 DEX WL seedlings Original data
14 high-R:FR bud axillary 0.68 >More info 0.35 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
15 root hypoxia p35S 0.80 >More info 0.23 >More info root hypoxia total hypoxia root Original data GEO bulk
16 whole roots 140 mM NaCl 16 hour 0.77 >More info 0.26 >More info whole roots standard Original data GEO bulk
17 gpa1 +ABA LF -0.48 >More info -0.55 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
18 WT Root-Pi 0.71 >More info 0.31 >More info WT Root+Pi roots Original data GEO bulk
19 Dry pre-dawn 0.52 >More info 0.50 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
20 Imbibed 1 h (seed) 0.69 >More info 0.32 >More info Dry seed Original data Time course of early seed germination
21 bri1-116 0.28 >More info 0.73 >More info Col seedling Original data GEO bulk
22 1 h Light IP RNA 0.72 >More info 0.28 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
23 mkk1 24h BTH rep -0.58 >More info -0.42 >More info Col-0 24h BTH rep Original data GEO bulk
24 fil-8 yab3-2 0.69 >More info 0.30 >More info wt Apices Original data GEO bulk
25 oas-a1.1 Cd 24h 0.49 >More info 0.50 >More info Cd 24h root Shoot Original data GEO bulk
26 agb1 +ABA LF -0.42 >More info -0.57 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
27 10min Reillumination IP RNA 0.77 >More info 0.20 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
28 Cocultivation 8 hrs leaf -0.54 >More info -0.40 >More info Mock cocultivation 8 hrs leaf Leaf Original data
29 Got7 UV 0.59 >More info 0.35 >More info Got7 mock UV seedling Original data
30 P35S:rGRF1 -0.61 >More info -0.33 >More info Col-0 Original data GEO bulk
31 miR393 0h -0.67 >More info -0.26 >More info WT 0h Leaf tissue Original data GEO bulk
32 MYB76 OE 0.73 >More info 0.20 >More info WT for MYB29/76 Original data GEO bulk
33 GRX-overexpression seedlings MV 0.68 >More info 0.24 >More info WT seedlings MV Seedlings Original data GEO bulk
34 Ler 10C long-day 0.57 >More info 0.35 >More info Ler 20C long-day seeds Original data GEO bulk
35 phr1 Root-Pi 0.69 >More info 0.23 >More info WT Root+Pi roots Original data GEO bulk
36 WT Shoot-Pi 0.54 >More info 0.37 >More info WT Shoot+Pi shoots Original data GEO bulk
37 M6PR transgenic leaf 0mM NaCl -0.63 >More info -0.28 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
38 shoot hypoxia pGL2 0.59 >More info 0.32 >More info shoot hypoxia total Original data GEO bulk
39 npr1-3 DCA 48h -0.58 >More info -0.33 >More info npr1-3 MOCK 48h Original data GEO bulk
40 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.70 >More info 0.21 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
41 MYB29 OE 0.73 >More info 0.17 >More info WT for MYB29/76 Original data GEO bulk
42 whole roots 140 mM NaCl 4 hour 0.53 >More info 0.36 >More info whole roots standard Original data GEO bulk
43 seedling mSPL13 -0.69 >More info -0.20 >More info seedling Col-0 Original data GEO bulk
44 shoot control pRBCS 0.66 >More info 0.22 >More info shoot control total Original data GEO bulk
45 WT 1wk -P 0.51 >More info 0.37 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
46 170G5-16 0.62 >More info 0.26 >More info Ler-2 ~600 pooled 7 mm root tips Original data GEO bulk
47 35S::Zat12+H2O2 0.59 >More info 0.29 >More info WT+H2O2 H2O2 Original data GEO bulk
48 toc1-1-73hr -0.70 >More info -0.18 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
49 agb1 gpa1 +ABA LF -0.58 >More info -0.30 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
50 gun1-1 -lincomycin 0.69 >More info 0.18 >More info Col-0 -lincomycin Original data GEO bulk
51 2hr transitory KNO3 PrR cell -0.67 >More info -0.19 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
52 Cs shoot 0.32 >More info 0.54 >More info control shoot Original data GEO bulk
53 bri1-5 mutant -0.61 >More info -0.25 >More info WT 7 day-old whole seedlings Original data
54 stn7-1 -0.51 >More info -0.35 >More info Col-0 rosette leaves Original data GEO bulk
55 spx1 spx2 resupplied Pi 4h 0.62 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
56 P35S:rGRF3 0.62 >More info 0.24 >More info WS Original data GEO bulk
57 root control p35S 0.67 >More info 0.18 >More info root control total control root Original data GEO bulk
58 Mutant iaa17-6 (IAA) 0.51 >More info 0.34 >More info Col (IAA) Original data GEO bulk
59 W(Liq) L-AOPP 0.64 >More info 0.21 >More info W(Liq) Mock whole plant Original data GEO bulk
60 cngc4 -0.53 >More info -0.31 >More info Ws-2 Seedlings Original data GEO bulk
61 WT+mannitol -0.66 >More info -0.18 >More info WT+no sugars rosette leaves Original data GEO bulk
62 shoot control pSUC2 0.66 >More info 0.18 >More info shoot control total Original data GEO bulk
63 WT Atum 1h -0.69 >More info -0.15 >More info WT 0h Leaf tissue Original data GEO bulk
64 Laer Flg22(Agrobacterium) 2h 0.63 >More info 0.21 >More info Laer Control leaf discs Original data GEO bulk
65 myb61 cork 0.64 >More info 0.19 >More info wt cork cork Original data GEO bulk
66 mkk2 24h BTH rep -0.71 >More info -0.12 >More info Col-0 24h BTH rep Original data GEO bulk
67 grf1/grf2/grf3 0.60 >More info 0.23 >More info WS Original data GEO bulk
68 toc1-1-69hr -0.62 >More info -0.21 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
69 WT Atum 2h -0.63 >More info -0.19 >More info WT 0h Leaf tissue Original data GEO bulk
70 Col-0 +ABA GC 0.56 >More info 0.26 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
71 ACN1-2 Sucrose -0.53 >More info -0.29 >More info Col-7 Sucrose Original data GEO bulk
72 IAA 0h 0.56 >More info 0.26 >More info control 0h root Original data GEO bulk
73 R. solani AG2-1 0.70 >More info 0.12 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
74 Heat no recovery 0.53 >More info 0.28 >More info Mock no recovery seedling Original data GEO bulk
75 15m.KNO3 -0.66 >More info -0.15 >More info To. KNO3 14 day old Roots Original data GEO bulk
76 shoot control pGL2 0.61 >More info 0.20 >More info shoot control total Original data GEO bulk
77 root control pRPL11C 0.70 >More info 0.11 >More info root control total control root Original data GEO bulk
78 myb61 xylem 0.52 >More info 0.28 >More info wt xylem xylem Original data GEO bulk
79 Root dark control 7h -0.54 >More info -0.26 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
80 fil-8 yab3-2 yab5-1 0.69 >More info 0.11 >More info wt Apices Original data GEO bulk
81 BAM8-Lig Ox untreated 0.50 >More info 0.29 >More info WT untreated none shoot Original data
82 WT resupplied Pi 4h 0.51 >More info 0.28 >More info WT complete seedlings Original data
83 root - 01% oxygen - 2h 0.68 >More info 0.11 >More info root - 21% oxygen - 2h Original data GEO bulk
84 Col0-PsmES4326-24hpi 0.18 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
85 shoot control pSultr2:2 0.54 >More info 0.24 >More info shoot control total Original data GEO bulk
86 Split KNO3 roots - 2days -0.52 >More info -0.26 >More info Split KCl roots - 2days 5mM KNO3 on ONE side for 2 days roots Original data GEO bulk
87 4d red light grown hmr-22 seedlings -0.57 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
88 cca1-lhy before light -0.53 >More info -0.24 >More info before light whole seedlings Original data GEO bulk
89 ga1-3 SCL3OE -0.68 >More info -0.09 >More info ga1-3 whole root Original data
90 root hypoxia pRPL11C 0.56 >More info 0.20 >More info root hypoxia total hypoxia root Original data GEO bulk
91 roots bhlh100/101 0uM Fe -0.62 >More info -0.13 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
92 WT (Col-0) inflorescence moderate drought day 3 0.66 >More info 0.09 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
93 Ws-2 high light 0.50 >More info 0.25 >More info Ws-2 low light Original data GEO bulk
94 pGL3::GL3-GR Dex 24hours -0.57 >More info -0.18 >More info pGL3::GL3-GR mock 24hours Original data GEO bulk
95 root control pWOL 0.68 >More info 0.07 >More info root control total control root Original data GEO bulk
96 roottip control pSCR -0.20 >More info -0.55 >More info roottip control total control roottip Original data GEO bulk
97 WT (Col-0) inflorescence moderate drought day 10 0.65 >More info 0.09 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
98 camta2/3 warm -0.68 >More info -0.06 >More info WT warm entire aerial part Original data GEO bulk
99 pistil 0.5HAP -0.74 >More info -0.00 >More info unpollinated pistil pistil Original data GEO bulk
100 dyt1 0.65 >More info 0.09 >More info WT anther Original data GEO bulk
101 gir root 4%glc 0.55 >More info 0.19 >More info Col-7 root 4%glc root Original data GEO bulk
102 oas-a1.1 root 0.20 >More info 0.54 >More info WT-Untreated Root Original data GEO bulk
103 cca1-lhy 60m light -0.59 >More info -0.14 >More info 60m light whole seedlings Original data GEO bulk
104 Polysomal RNA 35S:AtCSP1-FH1 0.60 >More info 0.13 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
105 shoot hypoxia pSUC2 0.54 >More info 0.19 >More info shoot hypoxia total Original data GEO bulk
106 pkl Mutant Uniconazole -0.67 >More info -0.05 >More info pkl Mutant mock Original data GEO bulk
107 whole roots 140 mM NaCl 32 hour 0.68 >More info 0.04 >More info whole roots standard Original data GEO bulk
108 whole roots 140 mM NaCl 1 hour 0.59 >More info 0.13 >More info whole roots standard Original data GEO bulk
109 seedlings +5AC 0.65 >More info 0.07 >More info control seedlings 10-day old whole seedling Original data GEO bulk
110 Imbibed 24 h ABA 3uM (seed) -0.64 >More info -0.08 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
111 4x -0.62 >More info -0.10 >More info 2x two week old seedlings Original data
112 noa1-2 -0.59 >More info -0.13 >More info Col-0 whole seedlings Original data GEO bulk
113 GSH 0.61 >More info 0.11 >More info control GSH treated seedlings Original data GEO bulk
114 whole seeds mature green -0.65 >More info -0.07 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
115 ABA control 0.59 >More info 0.12 >More info No ABA control Original data GEO bulk
116 ADD3 0.51 >More info 0.20 >More info WT aerial part Original data GEO bulk
117 pericycle control -0.61 >More info -0.10 >More info Control for tissue data mock pericycle Original data GEO bulk
118 toc1-1-77hr -0.51 >More info -0.20 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
119 Al treated 0.60 >More info 0.11 >More info control Original data GEO bulk
120 Dark 4 h pls UV-AB 5min 0.53 >More info 0.18 >More info Dark 4 h Original data Light treatments
121 35S:CDO1 normoxia 0.53 >More info 0.17 >More info WT normoxia normoxia whole rosette Original data
122 mtf1-1 0.56 >More info 0.14 >More info Col0 root Original data
123 Leafminer damaged seedlings 0.14 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
124 WT+H2O2 -0.74 >More info 0.04 >More info WT H2O2 Original data GEO bulk
125 root cells epidermis 140mM NaCl 1 hour -0.50 >More info -0.20 >More info root cells epidermis standard 1 hour root cells epidermis Original data
126 myb21 myb24 stage2 0.58 >More info 0.12 >More info WT stage2 Original data GEO bulk
127 spch -0.56 >More info -0.13 >More info Col-0 WT whole seedling Original data GEO bulk
128 AFB1 flg22 2h -0.62 >More info -0.07 >More info WT 0h Leaf tissue Original data GEO bulk
129 CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold -0.61 >More info -0.08 >More info CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 12h cold (4C) rosettes Original data GEO bulk
130 WT (Col-0) inflorescence moderate drought day 5 0.74 >More info -0.05 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
131 root cap pGL2(root cap pGL2BRI1) 0h BL -0.63 >More info -0.05 >More info WR 35S 0h BL brassinosteroid root Original data
132 2hr continuous KNO3 PrR cell -0.63 >More info -0.05 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
133 Imbibed 3 h (seed) 0.51 >More info 0.17 >More info Dry seed Original data Time course of early seed germination
134 non-polysome mRNA eif3k 0.54 >More info 0.14 >More info non-polysome mRNA WT aerial part Original data GEO bulk
135 root control pSultr2:2 0.65 >More info 0.03 >More info root control total control root Original data GEO bulk
136 oas-a1.1 shoot -0.63 >More info -0.05 >More info WT-Untreated Shoot Original data GEO bulk
137 Heat shock optimum 0.03 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
138 BAM8-Cat Ox untreated 0.61 >More info 0.07 >More info WT untreated none shoot Original data
139 pif4pif5 mut 1h FR 0.70 >More info -0.02 >More info WT 1h FR Original data GEO bulk
140 sid2-2 mock 0.55 >More info 0.12 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
141 ERF96OE 0.63 >More info 0.04 >More info WT leaf Original data
142 20m.KNO3 -0.56 >More info -0.11 >More info To. KNO3 14 day old Roots Original data GEO bulk
143 chalazal endosperm mature green -0.58 >More info -0.09 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
144 micropylar endosperm mature green -0.57 >More info -0.10 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
145 Hydrogen Peroxide 500 uM 0.57 >More info 0.10 >More info Control RB and PER Hydrogen Peroxide Original data
146 Laer pretreat GA Flg22 1h -0.04 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
147 root cortex -S -0.64 >More info -0.02 >More info root cortex pH5.7 Original data GEO bulk
148 gun1-9 norflurazon 0.55 >More info 0.11 >More info gun1-9 control Original data GEO bulk
149 efr-1 untreated -0.62 >More info -0.04 >More info WT untreated untreated Original data GEO bulk
150 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.66 >More info 0.00 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
151 embryo proper -0.55 >More info -0.11 >More info Control for tissue data Original data GEO bulk
152 WT Uniconazole -0.60 >More info -0.06 >More info WT mock Original data GEO bulk
153 Aerobic prt6 0.59 >More info 0.07 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
154 KO-nudx19 leaves -0.65 >More info 0.00 >More info WT leaves rosette leaves Original data
155 micropylar endosperm heart stage -0.56 >More info -0.09 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
156 T101D 10mM NH4NO3 0.53 >More info 0.12 >More info col 10mM NH4NO3 Root Original data
157 root cells endodermis 140mM NaCl 1 hour -0.59 >More info -0.06 >More info root cells endodermis standard 1 hour root cells endodermis Original data
158 whole seeds heart stage -0.59 >More info -0.06 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
159 toc1-1-61hr -0.58 >More info -0.07 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
160 prt6-1 -0.54 >More info -0.10 >More info Col-0 imbibed for 24 h Pre-germinated seeds Original data GEO bulk
161 E.coli TUV86 2 fliC 7h -0.66 >More info 0.02 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
162 Cvi -0.55 >More info -0.09 >More info Ler-2 ~600 pooled 7 mm root tips Original data GEO bulk
163 pollinated pop2-1 flowers -0.55 >More info -0.09 >More info pollinated WT flowers flowers Original data GEO bulk
164 toc1-1-93hr -0.50 >More info -0.14 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
165 IAA 2h -0.65 >More info 0.01 >More info control 2h root Original data GEO bulk
166 whole seeds -0.58 >More info -0.06 >More info Control for tissue data Original data GEO bulk
167 pif4pif5 mut 24h FR 0.57 >More info 0.07 >More info WT 24h FR Original data GEO bulk
168 seed coat mature green -0.58 >More info -0.06 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
169 seed coat -0.58 >More info -0.06 >More info Control for tissue data Original data GEO bulk
170 phyABCDE Dark 0.56 >More info 0.07 >More info WT Dark Dark whole seedling Original data GEO bulk
171 cdm1 mutant floral young floral buds 0.56 >More info 0.07 >More info WT floral yound floral buds Unopen flower buds Original data
172 hst5 -0.59 >More info -0.04 >More info Col-0 Original data GEO bulk
173 GA4 3 h (ga1 seed) 0.53 >More info 0.10 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
174 Mutant arf2-6 -0.51 >More info -0.12 >More info Col Original data GEO bulk
175 Mutant ap1-15(flower) -0.62 >More info -0.01 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
176 root control pPEP 0.64 >More info -0.01 >More info root control total control root Original data GEO bulk
177 DUO1 induced 12h -0.64 >More info 0.01 >More info 12hr-not-induced whole plant Original data GEO bulk
178 embryo proper heart stage -0.53 >More info -0.10 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
179 35S:PCO1 hypoxia -0.53 >More info -0.10 >More info WT hypoxia whole rosette Original data
180 SOS1 100mM NaCl -0.57 >More info -0.06 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
181 gul2-1 bri1-5 mutant -0.68 >More info 0.06 >More info WT 7 day-old whole seedlings Original data
182 Dark 1day ivd -0.50 >More info -0.12 >More info 0h ivd Original data
183 Whole root - low pH 6H -0.61 >More info -0.01 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
184 nhx6 -0.50 >More info -0.12 >More info WT Rosette leaf Original data GEO bulk
185 Oxidative Stress 3 h (root) -0.52 >More info -0.10 >More info Stress mock 3 h (root) Original data Stress treatments
186 fri-flc -0.67 >More info 0.05 >More info WT Original data GEO bulk
187 Hypocotyl -0.61 >More info -0.01 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
188 GRX-overexpression seedlings control 0.59 >More info 0.03 >More info WT seedlings control Seedlings Original data GEO bulk
189 lateral root cap-columella pBRN2 0h BL -0.63 >More info 0.01 >More info WR 35S 0h BL brassinosteroid root Original data
190 phyABDE 4-day dark- 2 hours Rc50 -0.58 >More info -0.04 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
191 Root wt CLE10 -0.51 >More info -0.11 >More info Root wt CLE25 root tip Original data GEO bulk
192 root epidermis and lateral root cap 40 mM NaCl -0.58 >More info -0.04 >More info root epidermis and lateral root cap Original data GEO bulk
193 ALC Toc1 light-dark Mock -0.55 >More info -0.06 >More info Col light-dark Mock no ethanol Original data GEO bulk
194 root hypoxia pSHR 0.54 >More info 0.07 >More info root hypoxia total hypoxia root Original data GEO bulk
195 root cap pGL2(QC pSCRBRI1) 0h BL -0.56 >More info -0.05 >More info WR 35S 0h BL brassinosteroid root Original data
196 miR393 flg22 2h -0.67 >More info 0.06 >More info WT 0h Leaf tissue Original data GEO bulk
197 QC -0.54 >More info -0.07 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
198 chalazal seed coat mature green -0.55 >More info -0.06 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
199 lateral nectary stage 14-15 -0.55 >More info -0.06 >More info Control for tissue data lateral nectaries Original data GEO bulk
200 Col whole leaf 3dpi -0.54 >More info -0.07 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
201 hni9 low nitrogen 0.61 >More info 0.00 >More info WT low nitrogen roots Original data GEO bulk
202 root protoplasts 40 mM NaCl -0.65 >More info 0.04 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
203 tcp13 -0.63 >More info 0.02 >More info WT inflorescences Original data GEO bulk
204 root hypoxia pPEP 0.51 >More info 0.10 >More info root hypoxia total hypoxia root Original data GEO bulk
205 camta1/3 warm -0.53 >More info -0.08 >More info WT warm entire aerial part Original data GEO bulk
206 Stem 2ndinternode -0.57 >More info -0.04 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
207 SIV pollen tube -0.62 >More info 0.01 >More info drypollen Semi in vivo-grown pollen tubes Original data GEO bulk
208 M6PR transgenic 100mM NaCl -0.53 >More info -0.08 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
209 Col-0 ozone -0.62 >More info 0.01 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
210 root control pSUC2 0.62 >More info -0.01 >More info root control total control root Original data GEO bulk
211 wrky33 mock 0.52 >More info 0.09 >More info WT mock 14 hour mock control leaves Original data
212 Carpels stage15 -0.54 >More info -0.06 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
213 gun1gun5 Norflurazon 0.53 >More info 0.07 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
214 peripherial endosperm -0.54 >More info -0.06 >More info Control for tissue data Original data GEO bulk
215 intact root control -0.53 >More info -0.07 >More info Control for tissue data mock whole root Original data GEO bulk
216 inhibitor B Treated -0.68 >More info 0.08 >More info Negative Control Original data GEO bulk
217 Nuclear GSH2 -0.50 >More info -0.10 >More info Cytoplasmic GSH2 Control Original data GEO bulk
218 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.62 >More info 0.02 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
219 ein2-1 +elf18 10h -0.65 >More info 0.05 >More info WT +elf18 10h elf18 Original data GEO bulk
220 siliques AtHb1 control 0.08 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
221 embryo proper mature green -0.52 >More info -0.07 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
222 median nectary stage 14-15 -0.52 >More info -0.07 >More info Control for tissue data median nectaries Original data GEO bulk
223 arr10 arr12 -0.53 >More info -0.06 >More info DMSO--WT DMSO roots Original data GEO bulk
224 ams 0.52 >More info 0.07 >More info WT anther Original data GEO bulk
225 nhx5 -0.56 >More info -0.03 >More info WT Rosette leaf Original data GEO bulk
226 lec2-1 8 DAF Seed 0.56 >More info 0.03 >More info WT (WS) 8 DAF Seed developing seeds dissected from sliques Original data
227 08h Col-0 0.53 >More info 0.06 >More info 00h Col-0 Original data GEO bulk
228 osmotic 11day root -0.55 >More info -0.04 >More info mock 10day root osmotic roots Original data GEO bulk
229 mature endodermis glcal -0.61 >More info 0.02 >More info Control for tissue data endodermis Original data GEO bulk
230 root cap pGL2 0h BL -0.50 >More info -0.09 >More info WR 35S 0h BL brassinosteroid root Original data
231 Ba1 UV 0.50 >More info 0.09 >More info Ba1 mock UV seedling Original data
232 WT 30μM arsenate 8 hours. -0.57 >More info -0.02 >More info WT control (not supplemented). Original data
233 35S::Zat12 -0.71 >More info 0.12 >More info WT Original data GEO bulk
234 OXUPB1-2 elongation zone -0.51 >More info -0.08 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
235 Tsu SA -0.60 >More info 0.01 >More info Col-0 SA Original data GEO bulk
236 ara1/2mut -0.56 >More info -0.02 >More info Col-3 Original data GEO bulk
237 leaf rlt1-1rlt2-1 0.56 >More info 0.02 >More info leaf Col-0 leaf Original data GEO bulk
238 AFB1 flg22 1h -0.67 >More info 0.09 >More info WT 0h Leaf tissue Original data GEO bulk
239 vte1-1 1d vernalization 0.59 >More info -0.01 >More info WT 1d vernalization Original data GEO bulk
240 toc1-1-81hr -0.57 >More info -0.01 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
241 Stamen stage15 -0.54 >More info -0.03 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
242 35S::IaTCP -0.65 >More info 0.08 >More info thaliana control secondary inflorescence Original data
243 Expanding leaf -0.53 >More info -0.04 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
244 camta1/2/3 24h cold -0.52 >More info -0.05 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
245 Drought Stress 24 h (shoot) -0.50 >More info -0.07 >More info Stress mock 24 h (shoot) Original data Stress treatments
246 4tga safener -0.51 >More info -0.06 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
247 camta1/2/3 warm -0.52 >More info -0.05 >More info WT warm entire aerial part Original data GEO bulk
248 Seedling-HeatStressed POLYSOMESmRNA -0.64 >More info 0.07 >More info Seedling-control POLYSOMESmRNA seedling Original data
249 Senescing leaf -0.53 >More info -0.04 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
250 iron minus 1 h -0.50 >More info -0.07 >More info iron +1 h root Original data GEO bulk
251 Drought Stress 24 h (root) 0.60 >More info -0.03 >More info Stress mock 24 h (root) Original data Stress treatments
252 CCA1-ox 12pm non-polysomal -0.58 >More info 0.01 >More info WT 12pm non-polysomal aerial part Original data
253 root cells endodermis and quiescent center -Fe -0.57 >More info -0.00 >More info whole roots standard Original data GEO bulk
254 des1.1 0.59 >More info -0.02 >More info Leaves-WT leaf Original data GEO bulk
255 root - 04% oxygen - 2h 0.62 >More info -0.05 >More info root - 21% oxygen - 2h Original data GEO bulk
256 C2H2 ZF TDNA mutant 0.57 >More info -0.00 >More info Col-WT mature pollen Original data GEO bulk
257 35S:VND7-VP16-GR+DEX +CHX -0.50 >More info -0.06 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
258 cca1-lhy 15m light -0.54 >More info -0.02 >More info 15m light whole seedlings Original data GEO bulk
259 Seedling-control POLYSOMESmRNA 0.65 >More info -0.09 >More info Seedling-control TOTALmRNA seedling Original data
260 overexpresser LBD37 in -N -0.59 >More info 0.03 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
261 AtMYB30-as 90-105 min Xanthomonas 0.58 >More info -0.02 >More info WT 90-105 min Xanthomonas Original data GEO bulk
262 Elevated CO2 fully expanded leaf 0.54 >More info 0.01 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
263 Cotyledons -0.54 >More info -0.01 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
264 peripheral endosperm mature green -0.50 >More info -0.05 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
265 35S:RPS4 rrs1-11 2h -0.51 >More info -0.04 >More info 35S:RPS4 2h leaves Original data
266 phr1 phl1 Root-Pi 0.50 >More info 0.05 >More info WT Shoot+Pi roots Original data GEO bulk
267 WT NAA 1h -0.67 >More info 0.13 >More info WT 0h Leaf tissue Original data GEO bulk
268 Shoot apex vegetative &Young leaves -0.50 >More info -0.04 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
269 Dark 40 min pls UV-A 5 min -0.55 >More info 0.01 >More info Dark 45 min Original data Light treatments
270 Te ozone -0.56 >More info 0.02 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
271 QC pSCR 0h BL -0.50 >More info -0.04 >More info WR 35S 0h BL brassinosteroid root Original data
272 46T-CK -0.51 >More info -0.03 >More info WT-CK none Original data
273 Imbibed 24 h ABA 30uM (seed) -0.71 >More info 0.17 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
274 WT flg22 1h -0.69 >More info 0.15 >More info WT 0h Leaf tissue Original data GEO bulk
275 WT Nitrate 0.5h -0.57 >More info 0.03 >More info WT untreated Original data GEO bulk
276 tcp14 -0.57 >More info 0.03 >More info WT inflorescences Original data GEO bulk
277 Seedling-HeatStressed TOTALmRNA -0.57 >More info 0.03 >More info Seedling-control TOTALmRNA seedling Original data
278 Seeds stage8 w/o siliques -0.54 >More info 0.01 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
279 Stem 1st node -0.50 >More info -0.03 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
280 root hypoxia pSUC2 0.52 >More info 0.01 >More info root hypoxia total hypoxia root Original data GEO bulk
281 Ibuprofen 3 h 0.55 >More info -0.02 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
282 20d after anthesis 0.57 >More info -0.04 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
283 Root GLU1-KO -0.57 >More info 0.04 >More info Root Col(0) roots Original data GEO bulk
284 pab total -0.62 >More info 0.10 >More info WT total seedling shoot/aerial seedling Original data
285 Mt SA -0.51 >More info -0.01 >More info Col-0 SA Original data GEO bulk
286 Seeds stage3 with siliques -0.51 >More info -0.01 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
287 Sepals stage15 -0.53 >More info 0.01 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
288 inhibitor A Treated -0.60 >More info 0.08 >More info Negative Control Original data GEO bulk
289 WT (Col-0) inflorescence well-watered day 4 0.50 >More info 0.02 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
290 ARR22-ox (t-zeatin 3 h) -0.60 >More info 0.08 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
291 Total RNA 35S:AtCSP1-FH1 0.69 >More info -0.17 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
292 ALC Toc1 light-light Mock 0.52 >More info -0.01 >More info Col light-light Mock no ethanol Original data GEO bulk
293 hyl1 -0.54 >More info 0.03 >More info Col-0 Original data GEO bulk
294 miR393 flg22 1h -0.61 >More info 0.10 >More info WT 0h Leaf tissue Original data GEO bulk
295 Brz220 12 h -0.64 >More info 0.13 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
296 low CO2 + light -0.53 >More info 0.02 >More info normal CO2 + light Original data GEO bulk
297 HARAP hypoxic -0.58 >More info 0.07 >More info hypoxic hypoxia Original data GEO bulk
298 FarRed Light 45min -0.51 >More info 0.00 >More info White Light 45min Original data Light treatments
299 bZIP TDNA mutant 0.53 >More info -0.02 >More info Col-WT mature pollen Original data GEO bulk
300 npr1 sni1 brca2a SA 0.68 >More info -0.17 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
301 Te CA -0.52 >More info 0.01 >More info Col CA Leaves Original data
302 pistil 8.0HAP -0.58 >More info 0.07 >More info unpollinated pistil pistil Original data GEO bulk
303 vip3 -0.54 >More info 0.04 >More info WT Original data GEO bulk
304 cop1 Seedling Dark -0.55 >More info 0.05 >More info WT Seedling Dark Original data GEO bulk
305 columella control -0.54 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
306 WT flg22 2h -0.63 >More info 0.13 >More info WT 0h Leaf tissue Original data GEO bulk
307 Col-0-avrB-6h -0.59 >More info 0.09 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
308 Light -0.01 >More info 0.51 >More info Control Original data GEO bulk
309 IAA7mII over-expressor IAA Treated -0.19 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
310 6xX2x interploidy cross 0.54 >More info -0.05 >More info 2xX2x cross Original data GEO bulk
311 Kas-1 -Fe 48h 0.54 >More info -0.05 >More info Kas-1 +Fe 24h roots Original data GEO bulk
312 Kas -Fe 48h Roots 0.54 >More info -0.05 >More info Kas +Fe 24h Roots Original data GEO bulk
313 Col BTH -0.18 >More info 0.67 >More info Col rosettes Original data GEO bulk
314 WT (Col-0) inflorescence well-watered day 3 0.65 >More info -0.16 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
315 Dex-rga(delta17) 2h GA4+DEX 0.61 >More info -0.12 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
316 MYB51 OE 0.58 >More info -0.09 >More info WT for ATR1/MYB51 Original data GEO bulk
317 epiF3 0.50 >More info -0.01 >More info WT Col-0 aerial part Original data
318 tZ -0.51 >More info 0.02 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
319 expressing C2 MeJA 0.63 >More info -0.14 >More info LUC2T Original data GEO bulk
320 WT NAA/flg 1h -0.66 >More info 0.18 >More info WT 0h Leaf tissue Original data GEO bulk
321 4C 1h -0.67 >More info 0.19 >More info 4C 0h Original data GEO bulk
322 seedlings protease IV -0.56 >More info 0.09 >More info seedlings nontreated control whole seedling Original data
323 F1 whole seedlings root 0.66 >More info -0.19 >More info Col whole seedlings root Seedlings Original data GEO bulk
324 hsfa1 quadruple mutant 0.52 >More info -0.05 >More info WT (Col-0) whole seedling Original data GEO bulk
325 dcl1-7 -0.52 >More info 0.05 >More info Ler Original data GEO bulk
326 endosperm paclobutrazol 0.62 >More info -0.15 >More info endosperm-control paclobutrazol endosperm Original data GEO bulk
327 Mutant axr3-1 -0.63 >More info 0.16 >More info Col Original data GEO bulk
328 root control pSHR 0.55 >More info -0.09 >More info root control total control root Original data GEO bulk
329 FLIGHT TAGESB plate6 ROOTS -0.55 >More info 0.09 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
330 atmyc2 cop1 Seedling Dark -0.53 >More info 0.07 >More info WT Seedling Dark Original data GEO bulk
331 SHR-GR Time 1H Dex -0.54 >More info 0.08 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
332 middle flower buds J10B -0.50 >More info 0.04 >More info middle flower buds J03B middle flower buds Original data GEO bulk
333 IAA Treated -0.51 >More info 0.05 >More info Negative Control Original data GEO bulk
334 Mutant iaa5_6_19 -0.58 >More info 0.12 >More info Col Original data GEO bulk
335 ckh1 CK0 0.50 >More info -0.05 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
336 sid2-2 safener -0.52 >More info 0.07 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
337 rhd2 -0.53 >More info 0.08 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
338 pkl Mutant mock -0.52 >More info 0.07 >More info WT mock Original data GEO bulk
339 RRE1 Chitin -0.55 >More info 0.11 >More info Chitin Original data GEO bulk
340 Dex-rga(delta17) 4h GA4+DEX 0.54 >More info -0.10 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
341 root cells -Fe -0.56 >More info 0.12 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
342 seed germinating in countinuous light 24h SL -0.23 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
343 Mutant nph4-1 -0.64 >More info 0.20 >More info Col Original data GEO bulk
344 smg7b-1 -0.58 >More info 0.14 >More info WT whole plant Original data GEO bulk
345 bak1-3 +Pep2 10h -0.53 >More info 0.10 >More info WT +Pep2 10h Pep2 Original data GEO bulk
346 15m.KCl -0.65 >More info 0.22 >More info To. KCl 14 day old Roots Original data GEO bulk
347 pif5 low R/FR 0.50 >More info -0.07 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
348 oligomycin 4 h -0.50 >More info 0.07 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
349 max4 hypocotyl -0.61 >More info 0.18 >More info wt hypocotyl hypocotyl Original data GEO bulk
350 WT Seedling BL -0.50 >More info 0.07 >More info WT Seedling Dark Original data GEO bulk
351 root Dosed gold -0.51 >More info 0.08 >More info root No gold .125 mM gold 24 h roots Original data
352 0.125 mM gold 24 h -0.51 >More info 0.08 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
353 wnk8-1 untreated 0.61 >More info -0.18 >More info Col-0 untreated seedlings Original data GEO bulk
354 Selenate (root) -0.70 >More info 0.27 >More info Ws (root) Original data GEO bulk
355 Root Selenate -0.70 >More info 0.27 >More info Root control 40 micromolar selenate Root Original data GEO bulk
356 Col whole leaf 6hpi -0.59 >More info 0.16 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
357 Col 1d -0.60 >More info 0.17 >More info Col CA Leaves Original data
358 pif4pif5 low R/FR 0.54 >More info -0.12 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
359 Norflurazon 0.53 >More info -0.11 >More info Col-0 Original data GEO bulk
360 Norflurazon 0.53 >More info -0.11 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
361 spx1 spx2 complete 0.50 >More info -0.08 >More info WT complete seedlings Original data
362 Seedling KUA1-IOX est -0.68 >More info 0.27 >More info Seedling KUA1-IOX mock Original data
363 bak1-3 +Pep2 2h -0.56 >More info 0.15 >More info WT +Pep2 2h Pep2 Original data GEO bulk
364 Mutant arf19-1 -0.52 >More info 0.11 >More info Col Original data GEO bulk
365 root cells stele -Fe -0.51 >More info 0.10 >More info whole roots standard Original data GEO bulk
366 root callus inducing medium 12 h 0.54 >More info -0.14 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
367 Mutant nph4-1_arf19-1 -0.50 >More info 0.10 >More info Col Original data GEO bulk
368 Root -P -0.66 >More info 0.27 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
369 AvrRpm1 2 h (leaf) -0.51 >More info 0.13 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
370 P.p 2.5hai -0.51 >More info 0.13 >More info At-Control roots Original data GEO bulk
371 slr-1 2h NAA 0.51 >More info -0.13 >More info Col-0 2h NAA Original data GEO bulk
372 FILp cells 0.51 >More info -0.13 >More info Protoplast Induced Original data GEO bulk
373 Red/FR Light 4 h 0.52 >More info -0.15 >More info FarRed Light 4 h Original data Light treatments
374 rli -0.52 >More info 0.15 >More info WT whole plant Original data GEO bulk
375 Dark 40min pls UV-AB 5min -0.51 >More info 0.15 >More info Dark 45 min Original data Light treatments
376 SCL3 OE 0.55 >More info -0.20 >More info Col-0 whole root Original data GEO bulk
377 Protoplast Induced -0.64 >More info 0.29 >More info Uninduced Original data GEO bulk
378 seedling SPL13 0.63 >More info -0.30 >More info seedling Col-0 Original data GEO bulk
379 root cells cortex -Fe -0.59 >More info 0.26 >More info whole roots standard Original data GEO bulk
380 rdo2 siliques -0.52 >More info 0.22 >More info WT Ler siliques Original data GEO bulk
381 DC3000 2 h (leaf) -0.59 >More info 0.29 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
382 Whole root - S 3H -0.31 >More info 0.56 >More info Whole root - S 0H Original data GEO bulk
383 Col in Pi deficiency medium -0.33 >More info 0.55 >More info Col in control medium root Original data GEO bulk
384 Total RNA 35S:AtCSP1-FH1 cold 0.61 >More info -0.39 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
385 Methyl Violet 0.5 uM -0.58 >More info 0.38 >More info Control MV and IC Methyl Violet Original data
386 afb3-1 2h KNO3 -0.60 >More info 0.45 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
387 Shoot -P -0.52 >More info 0.38 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
388 Shoot apex inflorescence (after bolting) -0.52 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
389 SA 24h -0.50 >More info 0.40 >More info EtOH 24h 24hr Original data GEO bulk
390 vtc2 mature somatic embryo -0.57 >More info 0.53 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
391 CCA1-ox 6am non-polysomal -0.49 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data