4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on csn5 (csn5a-2 csn5b) light
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List of experiments correlated with "csn5 (csn5a-2 csn5b) light"  Help Download transcriptome of top 30
Score Experiment Correlation from
csn5 (csn5a-2 csn5b) light		 Correlation to
csn5 (csn5a-2 csn5b) light		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 csn5 (csn5a-2 csn5b) light 1.00 >More info 1.00 >More info WT light Original data GEO bulk
2 csn3-1 light 0.92 >More info 0.92 >More info WT light Original data GEO bulk
3 csn4-1 dark 0.86 >More info 0.83 >More info WT light Original data GEO bulk
4 csn4-1 mutant 0.80 >More info 0.77 >More info WT dark Original data GEO bulk
5 UV 0.76 >More info 0.81 >More info WT aerial region Original data GEO bulk
6 cop1 Seedling BL+ABA 0.71 >More info 0.82 >More info WT Seedling BL+ABA Original data GEO bulk
7 csn5 (csn5a-2 csn5b) dark 0.75 >More info 0.76 >More info WT dark Original data GEO bulk
8 ice1 control 0.72 >More info 0.77 >More info WT control Original data GEO bulk
9 csn3-1 dark 0.74 >More info 0.75 >More info WT dark Original data GEO bulk
10 Imidazolinone EC50 0.70 >More info 0.78 >More info Carrier (Imidazolinone) Original data GEO bulk
11 LTN008-2 aza-dc 0.75 >More info 0.72 >More info LTN012-2 Mock Original data
12 ice1 6H Cold 0.69 >More info 0.77 >More info WT 6H Cold Original data GEO bulk
13 cop1 Seedling BL 0.66 >More info 0.80 >More info WT Seedling BL Original data GEO bulk
14 DFPM 0.69 >More info 0.77 >More info control Original data GEO bulk
15 Sulfometuron EC50 0.71 >More info 0.75 >More info Carrier Original data GEO bulk
16 seedlings +5AC 0.71 >More info 0.73 >More info control seedlings 10-day old whole seedling Original data GEO bulk
17 Cor 10h 0.66 >More info 0.78 >More info Mock 10h Cor Original data GEO bulk
18 atmyc2 cop1 Seedling BL 0.63 >More info 0.81 >More info WT Seedling BL Original data GEO bulk
19 Col ozone 2d 0.64 >More info 0.78 >More info Col clean-air 2d ozone Original data GEO bulk
20 bZIP1ko mutant N+Light- 0.60 >More info 0.82 >More info WT-sib N+Light- whole plant Original data GEO bulk
21 SLWF infested 0.65 >More info 0.77 >More info SLWF uninfested rosette tissue Original data GEO bulk
22 smg7b-1 0.67 >More info 0.74 >More info WT whole plant Original data GEO bulk
23 WT powdery mildew 0.66 >More info 0.75 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
24 sta1 0.71 >More info 0.69 >More info WT Original data GEO bulk
25 ABA DFPM 0.68 >More info 0.72 >More info control Original data GEO bulk
26 Primisulfuron EC50 0.66 >More info 0.73 >More info Carrier (primisulfuron) Original data GEO bulk
27 Col-0 under 4 days salt 0.67 >More info 0.72 >More info Col-0 under control 4 days salt treatment rosette Original data
28 35S:RPS4 eds1-2 24h -0.66 >More info -0.73 >More info 35S:RPS4 24h leaves Original data
29 WT-SA 0.65 >More info 0.74 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
30 lht1 untreated 0.65 >More info 0.74 >More info WT untreated untreated leaf Original data GEO bulk
31 35S:RPS4 eds1-2 8h -0.65 >More info -0.74 >More info 35S:RPS4 8h leaves Original data
32 IMI 4mM 0.70 >More info 0.69 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
33 dor drought 0.55 >More info 0.83 >More info WT drought Original data GEO bulk
34 sni1 0.59 >More info 0.79 >More info WT Original data GEO bulk
35 Cor 24h 0.60 >More info 0.78 >More info Mock 24h Cor Original data GEO bulk
36 cpr5 0.64 >More info 0.74 >More info WT seedling Original data GEO bulk
37 ABA control 0.57 >More info 0.80 >More info No ABA control Original data GEO bulk
38 irradiated leaf (WT 1d) 0.54 >More info 0.82 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
39 sid2 -0.59 >More info -0.77 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
40 Triazolopyrimidine EC50 0.67 >More info 0.69 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
41 CMP 24hr 0.63 >More info 0.73 >More info Acetone 24hr root Original data GEO bulk
42 bak1-3 +Pep2 10h 0.65 >More info 0.70 >More info WT +Pep2 10h Pep2 Original data GEO bulk
43 S58-2 0.59 >More info 0.76 >More info wt Original data GEO bulk
44 smg5-2 0.65 >More info 0.70 >More info WT whole plant Original data GEO bulk
45 cpr5npr1 0.60 >More info 0.75 >More info WT(COL) Original data GEO bulk
46 CMP 4hr 0.63 >More info 0.72 >More info Acetone 4hr root Original data GEO bulk
47 cpr5 0.59 >More info 0.76 >More info WT(COL) Original data GEO bulk
48 AvrRpt2 Col-0 6hpi 0.63 >More info 0.71 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
49 eds16 whole leaf 5dpi -0.59 >More info -0.75 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
50 Botrytis cinerea 48h 0.61 >More info 0.73 >More info control 48h Original data GEO bulk
51 clf-28 swn-7 0.63 >More info 0.71 >More info Col whole plant Original data GEO bulk
52 Fenclorim 4hr 0.62 >More info 0.72 >More info Acetone 4hr root Original data GEO bulk
53 upf3 0.65 >More info 0.69 >More info WT whole plant Original data GEO bulk
54 Shoot -Cs 0.52 >More info 0.81 >More info Control-shoot Original data GEO bulk
55 Mutant siz1-3 0.62 >More info 0.71 >More info Col-0 Original data GEO bulk
56 gh3.5-1D 48 hpi 0.61 >More info 0.72 >More info Col-0 uninoculated Original data GEO bulk
57 siz1-3 control 0.62 >More info 0.71 >More info Col-0 control Original data GEO bulk
58 HopZ1a treated 0.60 >More info 0.73 >More info col Original data GEO bulk
59 del1-1 mutant 5d uninfected 0.57 >More info 0.75 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
60 RPL18 TuMV inoculated polysomal RNA 0.60 >More info 0.72 >More info mock inoculated polysomal RNA PO Original data GEO bulk
61 Col leaves 48h LT 0.60 >More info 0.72 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
62 Col whole leaf 5dpi 0.59 >More info 0.73 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
63 PAHs stress 0.60 >More info 0.72 >More info exp control phenanthrene whole plants Original data GEO bulk
64 Mutant cry1 (High Light) -0.63 >More info -0.68 >More info Col-0 (High Light) Original data GEO bulk
65 SA 0.58 >More info 0.73 >More info WT mock Whole seedling Original data GEO bulk
66 Cor hrpS 10h 0.64 >More info 0.67 >More info Mock 10h Cor hrpS Original data GEO bulk
67 cry1 high light -0.63 >More info -0.68 >More info Col-O high light Original data GEO bulk
68 ARR21C-ox 0.67 >More info 0.63 >More info Col-0 Original data ARR21C overexpression
69 lht1 PstDC3000 48h 0.63 >More info 0.67 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
70 Col whole leaf amplified 5 dpi 0.56 >More info 0.74 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
71 apum23 0.60 >More info 0.70 >More info WT (Col-3) aerial parts Original data GEO bulk
72 WT in -N 0.60 >More info 0.70 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
73 BLM+INA 0.59 >More info 0.71 >More info CK BLM and INA seedling Original data
74 toc1-1-57hr 0.58 >More info 0.72 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
75 upf1 0.64 >More info 0.65 >More info WT whole plant Original data GEO bulk
76 ice1 3H Cold 0.68 >More info 0.61 >More info WT 3H Cold Original data GEO bulk
77 CMV-WT 0.59 >More info 0.70 >More info Mock-At Aerial tissues Original data GEO bulk
78 GA4 3 h (ga1 seed) 0.60 >More info 0.69 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
79 irradiated leaf (cmt 1d) 0.56 >More info 0.72 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
80 Nicotinamide-81hr 0.61 >More info 0.67 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
81 RPL18 TuMV inoculated total RNA 0.56 >More info 0.72 >More info mock inoculated total RNA PO Original data GEO bulk
82 Glyphosate EC50 0.51 >More info 0.77 >More info Carrier (Glyphosate) Original data GEO bulk
83 S15-118 0.51 >More info 0.77 >More info wt Original data GEO bulk
84 nia1nia2 0.62 >More info 0.66 >More info Col-0 whole seedlings Original data GEO bulk
85 Shoot -K 0.60 >More info 0.68 >More info Control-shoot Original data GEO bulk
86 K starvation (shoot) 0.60 >More info 0.68 >More info Ws (shoot) Original data GEO bulk
87 aox1a(line) MLD stressed 0.59 >More info 0.69 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
88 Mutant siz1-3 (Drought) 0.64 >More info 0.63 >More info Col-0 (Drought) Original data GEO bulk
89 UV Stress 24 h (shoot) 0.58 >More info 0.69 >More info Stress mock 24 h (shoot) Original data Stress treatments
90 siz1-3 drought 0.64 >More info 0.63 >More info Col-0 drought Original data GEO bulk
91 35S::PI ap3-3 35S::AP-GR +DEX 0.47 >More info 0.80 >More info 0hr DEX Original data GEO bulk
92 pad4-PsmES4326-24hpi -0.59 >More info -0.67 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
93 B.cinerea 18 h infection 0.59 >More info 0.67 >More info Mock 18 h Original data Botrytis cinerea infection
94 Botrytis cinerea 18h 0.59 >More info 0.67 >More info control 18h Original data GEO bulk
95 long 17-degree- 0.43 >More info 0.83 >More info control long Original data GEO bulk
96 Col whole leaf 7dpi 0.57 >More info 0.69 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
97 npr1-1 SA -0.63 >More info -0.62 >More info Col-0 SA complete seedling Original data
98 msh1 recA3 heat shock 0.52 >More info 0.73 >More info WT heat shock above-ground parts Original data GEO bulk
99 efr-1 +elf18 10h -0.56 >More info -0.69 >More info WT +elf18 10h elf18 Original data GEO bulk
100 Mutant NahG(leaf) -0.52 >More info -0.73 >More info Col-0 (leaf) Original data GEO bulk
101 ataf1-1 mutant Col-0 Bgh inoculated 0.59 >More info 0.66 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
102 hrpA 7h 0.56 >More info 0.68 >More info Mock 7h hrpA Original data GEO bulk
103 ice1 24H Cold 0.61 >More info 0.63 >More info WT 24H Cold Original data GEO bulk
104 Osmotic Stress 24 h (shoot) 0.57 >More info 0.66 >More info Stress mock 24 h (shoot) Original data Stress treatments
105 9 hr Hypoxia 1 hr recovery Total RNA 0.55 >More info 0.68 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
106 HopZ1a treated ulp1c ulp1d 0.54 >More info 0.69 >More info col Original data GEO bulk
107 Col0-PsmES4326-24hpi 0.62 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
108 Col-0 INA 48h 0.49 >More info 0.74 >More info Col-0 MOCK 48h Original data GEO bulk
109 AgNO3 3 h 0.56 >More info 0.66 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
110 Laer treat paclobutrazol (PAC) 0.54 >More info 0.68 >More info Laer Control leaf discs Original data GEO bulk
111 sid2-1 cold -0.51 >More info -0.71 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
112 DC3000 24h 0.57 >More info 0.65 >More info Mock 24h DC3000 Original data GEO bulk
113 sicy-192 gun1-101 cotyledons 0.58 >More info 0.64 >More info WT cotyledons cotyledons Original data
114 pnp1-1 1wk +P 0.63 >More info 0.58 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
115 9 hr Hypoxia 1 hr recovery IP RNA 0.57 >More info 0.64 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
116 35S-MIF1 light grown 0.44 >More info 0.77 >More info Light-grown WT control Original data GEO bulk
117 E.coli TUV86 2 fliC 7h 0.55 >More info 0.65 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
118 cpr5scv1 0.52 >More info 0.68 >More info WT(COL) Original data GEO bulk
119 ceh1 mutant 0.54 >More info 0.66 >More info Parent line Original data
120 WT cold 0.52 >More info 0.68 >More info WT control All aerial tissue Original data GEO bulk
121 WT Seedling BL+ABA 0.51 >More info 0.69 >More info WT Seedling BL Original data GEO bulk
122 plant (tga2-5-6) 4h phytoprostane A1 0.59 >More info 0.61 >More info plant (tga2-5-6) 4h control Original data GEO bulk
123 coi1-2 0.49 >More info 0.71 >More info Col-0 mock Whole seedling Original data GEO bulk
124 CLO 4mM 0.59 >More info 0.60 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
125 AtLysM RLK1 mutant water 0.55 >More info 0.64 >More info WT water Original data GEO bulk
126 toc1-1-49hr 0.60 >More info 0.59 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
127 GST NPP1 4 h (leaf) 0.57 >More info 0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
128 aox1a:rpoTmp untreated 0.50 >More info 0.69 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
129 sdg2 0.64 >More info 0.55 >More info wt seedling Original data GEO bulk
130 Mutant gh3.5-1D (AvrRpt2) 0.52 >More info 0.67 >More info Col-0 (AvrRpt2) Original data GEO bulk
131 Cycloheximide 3 h 0.53 >More info 0.66 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
132 Col BTH 0.51 >More info 0.67 >More info Col rosettes Original data GEO bulk
133 Col-0 48 hpi 0.55 >More info 0.63 >More info Col-0 uninoculated Original data GEO bulk
134 Phytoprostane A1 4 h 0.59 >More info 0.59 >More info Col-0 Original data GEO bulk
135 Chitosan 3h Treatment 0.61 >More info 0.57 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
136 seedlings-week-old RECA1-overexpressing
transgenic		 0.49 >More info 0.69 >More info seedlings-week-old Col-0 seedlings Original data
137 seedling 3h after Gamma WT 0.45 >More info 0.73 >More info seedling day 1 unirradiated WT 3h Original data
138 seedling 1.5h after Gamma WT 0.46 >More info 0.72 >More info seedling day 1 unirradiated WT 1.5h Original data
139 Col-0 WT HL 3h 0.54 >More info 0.63 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
140 BLM 0.51 >More info 0.66 >More info CK BLM seedling Original data
141 anac017-2 AntimycinA 3h -0.53 >More info -0.64 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
142 cdpk6-yfp 0.57 >More info 0.60 >More info Kan seedlings Original data GEO bulk
143 toc1-1-85hr 0.54 >More info 0.63 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
144 SPT4-R3 seedlings0 DAS 0.56 >More info 0.61 >More info Col-0 seedlings0 DAS seedlings Original data
145 col-5 hrpA 12h 0.50 >More info 0.67 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
146 Phaseolicola 2 h (leaf) 0.48 >More info 0.69 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
147 camta2/3 warm 0.52 >More info 0.64 >More info WT warm entire aerial part Original data GEO bulk
148 Pto inoculated 0.53 >More info 0.63 >More info col Original data GEO bulk
149 35:SUB1A 0.51 >More info 0.65 >More info WT whole seedling Original data GEO bulk
150 OH1 0.54 >More info 0.62 >More info Col-0 leaves Original data GEO bulk
151 low water potential 0.50 >More info 0.66 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
152 pvip1 pvip2 0.54 >More info 0.62 >More info Col-0 whole rosettes Original data GEO bulk
153 pmr4-1 control 0.53 >More info 0.63 >More info WT control uninoculated Original data GEO bulk
154 col-5 DC3000 12h 0.53 >More info 0.63 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
155 downy mildew cotyledons late stage 0.48 >More info 0.68 >More info mock inoculated Cotyledons Original data GEO bulk
156 A6 mutant 0.49 >More info 0.67 >More info WT rosette leaves Rosette leaves Original data GEO bulk
157 cpr5npr1svi1 0.48 >More info 0.68 >More info WT(COL) Original data GEO bulk
158 Fenclorim 24hr 0.57 >More info 0.59 >More info Acetone 24hr root Original data GEO bulk
159 aba3-1 0.47 >More info 0.69 >More info wt Original data GEO bulk
160 Seedling KUA1-IOX est 0.56 >More info 0.59 >More info Seedling KUA1-IOX mock Original data
161 E.coli 0157 H7 7h 0.54 >More info 0.61 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
162 pmr5 pmr6 0.53 >More info 0.62 >More info Col-0 Original data GEO bulk
163 pepr1-1 Pepr2-3 +Pep2 2h -0.52 >More info -0.63 >More info WT +Pep2 2h Pep2 Original data GEO bulk
164 hrpA fliC 7h 0.51 >More info 0.64 >More info Mock 7h hrpA fliC Original data GEO bulk
165 des1 water 0.56 >More info 0.59 >More info WT water water leaf Original data GEO bulk
166 mpk6-ko Flg22 4h 0.52 >More info 0.63 >More info mpk6-ko H2O 4h Original data GEO bulk
167 FarRed Light 4 h 0.39 >More info 0.76 >More info White Light 4 h Original data Light treatments
168 Col-0 DCA 48h 0.48 >More info 0.67 >More info Col-0 MOCK 48h Original data GEO bulk
169 pab polysome 0.46 >More info 0.69 >More info WT polysome seedling shoot/aerial seedling Original data
170 seedling 24h after Gamma WT 0.46 >More info 0.69 >More info seedling day 2 unirradiated WT 24h Original data
171 WT seedlings MV 0.50 >More info 0.64 >More info WT seedlings control Seedlings Original data GEO bulk
172 E2Fa-Dpa 0.55 >More info 0.59 >More info WT Original data GEO bulk
173 rpoTmp(line) MLD stressed 0.55 >More info 0.59 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
174 Flagellin 4 h (leaf) 0.55 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
175 Nicotinamide-57hr 0.56 >More info 0.58 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
176 rosettes WT drought 0.49 >More info 0.65 >More info rosettes WT watered Original data GEO bulk
177 Elevated CO2 AMPLE N DAY 0.47 >More info 0.67 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
178 Nicotinamide-53hr 0.55 >More info 0.58 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
179 Mutant axr3-1 0.52 >More info 0.61 >More info Col Original data GEO bulk
180 WT chitooctaose 0.52 >More info 0.61 >More info WT water Original data GEO bulk
181 penta Alternaria 3dpi 0.59 >More info 0.54 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
182 WT 2-4h Xanthomonas 0.48 >More info 0.65 >More info WT T0 Original data GEO bulk
183 Elevated CO2 AMPLE N NIGHT 0.42 >More info 0.71 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
184 ein2-1 9 hpi A. brassicicola 0.52 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
185 WT flg22 2h 0.51 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
186 WT Col-0 Bgh inoculated 0.47 >More info 0.65 >More info WT Col-0 Un-inoculated Original data GEO bulk
187 nas4x leaves - Fe -0.49 >More info -0.63 >More info WT leaves - Fe Leaves Original data GEO bulk
188 DC3000 2 h (leaf) 0.42 >More info 0.70 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
189 nia1nia2noa1-2 0.56 >More info 0.55 >More info Col-0 whole seedlings Original data GEO bulk
190 pnp1-1 1wk -P 0.61 >More info 0.50 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
191 arf2 brz -0.51 >More info -0.60 >More info arf2 mock Original data GEO bulk
192 Laer pretreat GA Flg22 1h 0.40 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
193 edr1 18 h powdery mildew 0.48 >More info 0.63 >More info Col-0 18 h powdery mildew Original data GEO bulk
194 erf5 erf6 +chitooctaose -0.47 >More info -0.64 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
195 seedling 24h after Gamma atm-1 0.47 >More info 0.64 >More info seedling day 2 unirradiated atm-1 24h Original data
196 toc1-1-61hr 0.58 >More info 0.52 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
197 ARR22-ox (t-zeatin 3 h) 0.54 >More info 0.56 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
198 Col whole leaf 5 dpi 0.43 >More info 0.67 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
199 toc1-1-81hr 0.49 >More info 0.61 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
200 gun1gun5 far-red pretreated -0.44 >More info -0.66 >More info WT far-red pretreated Original data GEO bulk
201 S14-150 0.41 >More info 0.69 >More info wt Original data GEO bulk
202 shoots bhlh100/101 0uM Fe 0.54 >More info 0.55 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
203 pnp1-1 3h +P 0.53 >More info 0.56 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
204 short 12-degree- 0.29 >More info 0.80 >More info control short Original data GEO bulk
205 erf104-ko Flg22 4h 0.41 >More info 0.68 >More info erf104-ko H2O 4h Original data GEO bulk
206 atgsnor1-1-avrB-6h 0.46 >More info 0.63 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
207 embryo paclobutrazol 0.46 >More info 0.63 >More info embryo-control paclobutrazol embryo Original data GEO bulk
208 hira-root -0.51 >More info -0.58 >More info WT-root root Original data
209 A. thaliana-A. lyrata hybrid -0.52 >More info -0.57 >More info A. thaliana mature leaves before flowering Original data GEO bulk
210 5-Triiodobenzoic acid3 h 0.48 >More info 0.61 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
211 WT-NOCO2 INFECTED 0.47 >More info 0.62 >More info WT-MOCK Original data GEO bulk
212 msh1 albino 0.56 >More info 0.52 >More info WT aerial part Original data GEO bulk
213 Laer Flg22 2h 0.55 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
214 IRP1-OE-Ctrl--shoot 0.50 >More info 0.58 >More info COL-0-Ctrl--shoot shoot Original data
215 Blue Light 4 h 0.38 >More info 0.70 >More info White Light 4 h Original data Light treatments
216 Salt Stress 24 h (shoot) 0.44 >More info 0.64 >More info Stress mock 24 h (shoot) Original data Stress treatments
217 GST 4 h (leaf) 0.48 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
218 flu 0.46 >More info 0.62 >More info WT Col Original data GEO bulk
219 rosette Dark Wounded 0.37 >More info 0.71 >More info rosette Dark Control Original data GEO bulk
220 Col leaf scrape 5 dpi 0.47 >More info 0.61 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
221 hrcC 0.45 >More info 0.63 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
222 Mature callus 0.47 >More info 0.61 >More info Young callus hypocotyls Original data GEO bulk
223 Differentiation 12h 0.44 >More info 0.64 >More info Differentiation 0h leaves Original data
224 Col-0 SA 0.55 >More info 0.52 >More info Col-0 water complete seedling Original data
225 Col-0 9 hpi A. brassicicola 0.51 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
226 pmr5 0.52 >More info 0.55 >More info Col-0 Original data GEO bulk
227 toc1-1-53hr 0.53 >More info 0.54 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
228 Octopus overexpressor 35SDYG25 0.43 >More info 0.64 >More info WS Original data GEO bulk
229 npr1-PsmES4326-24hpi -0.46 >More info -0.61 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
230 dicamba 0.43 >More info 0.64 >More info WT mock whole seedling Original data GEO bulk
231 amiR-tor induced 6d 0.46 >More info 0.61 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
232 OE WRKY63.3 high light 0.46 >More info 0.61 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
233 gul2-1 mutant 0.46 >More info 0.61 >More info WT 7 day-old whole seedlings Original data
234 Cocultivation 8 hrs root 0.46 >More info 0.61 >More info Mock cocultivation 8 hrs root Root Original data
235 Stem tissue 5 days NAA 0.47 >More info 0.60 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
236 Nicotinamide-85hr 0.53 >More info 0.53 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
237 toc1-1-65hr 0.57 >More info 0.49 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
238 abh1 -ABA 0.51 >More info 0.55 >More info Col-0 -ABA Original data GEO bulk
239 inhibitor A Treated 0.45 >More info 0.61 >More info Negative Control Original data GEO bulk
240 phyB mutant 22C 10hrs -0.44 >More info -0.62 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
241 camta1/3 warm 0.43 >More info 0.63 >More info WT warm entire aerial part Original data GEO bulk
242 atgsnor1-1 -0.50 >More info -0.55 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
243 Laer Flg22+GA 2h 0.52 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
244 mkk1/mkk2 control rep 0.53 >More info 0.52 >More info Col-0 Time 0 rep Original data GEO bulk
245 mkk1/mkk2 24h BTH rep 0.50 >More info 0.55 >More info Col-0 24h BTH rep Original data GEO bulk
246 flu over-tAPX 0.42 >More info 0.63 >More info WT Col Original data GEO bulk
247 35S::ERF104 Flg22 4h 0.44 >More info 0.61 >More info 35S::ERF104 H2O 4h Original data GEO bulk
248 rosettes myoox drought 0.46 >More info 0.59 >More info rosettes myoox watered Original data GEO bulk
249 oligomycin 4 h 0.46 >More info 0.59 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
250 camta1/2/3 warm 0.49 >More info 0.56 >More info WT warm entire aerial part Original data GEO bulk
251 embryo ABA 0.42 >More info 0.63 >More info embryo-control ABA embryo Original data GEO bulk
252 WT-Dry 0.37 >More info 0.68 >More info WT-CK dehydration treatment 1h Original data
253 scrm-D:mute 0.58 >More info 0.47 >More info Col-0 WT whole seedling Original data GEO bulk
254 9 hr Hypoxia Total RNA 0.47 >More info 0.58 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
255 9 hr Hypoxia IP RNA 0.48 >More info 0.57 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
256 overexpresser LBD38 in -N -0.52 >More info -0.52 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
257 albino Ds13-2198-1 -0.58 >More info -0.46 >More info control Original data GEO bulk
258 apk1 apk2 0.51 >More info 0.53 >More info Col0-control whole rosette Original data GEO bulk
259 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.56 >More info -0.48 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
260 P.p 30hai 0.46 >More info 0.58 >More info At-Control roots Original data GEO bulk
261 sicy-192 cotyledons 0.37 >More info 0.67 >More info WT cotyledons cotyledons Original data
262 gis5 seedlings 0.48 >More info 0.56 >More info WT seedlings Whole seedlings (leaves + roots) Original data
263 wrky33 Bc inoculation 14h 0.58 >More info 0.45 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
264 eif3h non-polysome 0.53 >More info 0.50 >More info WT non-polysome Original data GEO bulk
265 WT +elf18 10h 0.51 >More info 0.52 >More info WT untreated elf18 Original data GEO bulk
266 scrm-D 0.56 >More info 0.47 >More info Col-0 WT whole seedling Original data GEO bulk
267 vtc1 (II) 0.50 >More info 0.53 >More info Col (II) rosette Original data GEO bulk
268 Light 3day wt -0.39 >More info -0.64 >More info 0h wt Original data
269 long 12-degree- 0.42 >More info 0.61 >More info control long Original data GEO bulk
270 Laer Flg22 1h 0.48 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
271 60m light 0.29 >More info 0.74 >More info before light whole seedlings Original data GEO bulk
272 safener treated 0.44 >More info 0.59 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
273 R. solani AG8 0.39 >More info 0.64 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
274 amiR-tor induced 3d 0.48 >More info 0.55 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
275 pepr1-1 Pepr2-3 +Pep2 10h -0.48 >More info -0.55 >More info WT +Pep2 10h Pep2 Original data GEO bulk
276 JMJ24 knockout 0.49 >More info 0.54 >More info WT Original data GEO bulk
277 vte2-1 3d vernalization 0.42 >More info 0.61 >More info WT 3d vernalization Original data GEO bulk
278 Elevated CO2 fully expanded leaf 0.56 >More info 0.46 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
279 toc1-1-77hr 0.56 >More info 0.46 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
280 TaFLS overexpression line (OE2) -0.52 >More info -0.50 >More info Col-0 Rosette leaves Original data
281 Red/FR Light 4 h -0.29 >More info -0.73 >More info FarRed Light 4 h Original data Light treatments
282 Col-0 37C 0.40 >More info 0.62 >More info Col-0 22C Original data GEO bulk
283 Heat and anoxia 0.38 >More info 0.64 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
284 TNT-seedlings 0.41 >More info 0.61 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
285 ckh1 CK200 0.46 >More info 0.56 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
286 PBZ 0.38 >More info 0.64 >More info none PBZ Rosette Original data GEO bulk
287 Compost 0.47 >More info 0.55 >More info Perlite Compost Original data GEO bulk
288 ahg1-1 0.39 >More info 0.63 >More info ABA control Original data GEO bulk
289 Leafminer damaged seedlings 0.46 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
290 seedling 24h after HZE WT 0.34 >More info 0.68 >More info seedling day 2 unirradiated WT 24h Original data
291 Nicotinamide-61hr 0.51 >More info 0.50 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
292 short 17-degree- 0.32 >More info 0.69 >More info control short Original data GEO bulk
293 npr1-3 DCA 48h 0.44 >More info 0.57 >More info npr1-3 MOCK 48h Original data GEO bulk
294 ahg2-1sid2-2 0.36 >More info 0.65 >More info WT (Col) control Original data GEO bulk
295 Laer Flg22+GA 1h 0.48 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
296 Col-0-avrB-6h 0.40 >More info 0.61 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
297 R. solani AG2-1 0.44 >More info 0.57 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
298 Ws HS 0.37 >More info 0.64 >More info Ws control heat shocked seedling Original data GEO bulk
299 camta1/2/3 24h cold 0.43 >More info 0.58 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
300 35S:RPS4 eds1-2 2h -0.37 >More info -0.64 >More info 35S:RPS4 2h leaves Original data
301 WT 1wk -P 0.46 >More info 0.54 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
302 Whole root - low pH 24H 0.38 >More info 0.62 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
303 Col-Luc WT 3h antimycin A 0.41 >More info 0.59 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
304 WT 24h cold 0.42 >More info 0.58 >More info WT warm 24h cold entire aerial part Original data GEO bulk
305 0.125 mM gold 24 h 0.46 >More info 0.54 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
306 sfr3 control 0.36 >More info 0.64 >More info WT control All aerial tissue Original data GEO bulk
307 root endodermis and quiescent center 40 mM NaCl 0.36 >More info 0.64 >More info root endodermis and quiescent center Original data GEO bulk
308 root Dosed gold 0.46 >More info 0.54 >More info root No gold .125 mM gold 24 h roots Original data
309 vte2 leaves 48h LT 0.47 >More info 0.53 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
310 Te ozone 0.51 >More info 0.48 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
311 long 14-degree- 0.45 >More info 0.54 >More info control long Original data GEO bulk
312 Heat 0.38 >More info 0.61 >More info Control 90 minutes at 38°C. Original data GEO bulk
313 Laer GA 1h 0.46 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
314 oas-a1.1 Cd 18h 0.37 >More info 0.62 >More info Cd 18h root Root Original data GEO bulk
315 rcf1-1 cold 24h 0.32 >More info 0.67 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
316 Tsu -Fe 48h Shoots 0.48 >More info 0.51 >More info Tsu +Fe 24h Shoots Original data GEO bulk
317 col-5 DC3000-avrRpm 4h 0.42 >More info 0.57 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
318 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.45 >More info 0.54 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
319 8-DAC chr11-1chr17-1 0.47 >More info 0.52 >More info 8-DAC Col-0 leaf explants Original data
320 seedling 24h after HZE atm-1 0.28 >More info 0.71 >More info seedling day 2 unirradiated atm-1 24h Original data
321 FOX line K16331 0.46 >More info 0.52 >More info empty vector control (T3) FOX lines Original data GEO bulk
322 oas-a1.1 Cd 24h 0.44 >More info 0.54 >More info Cd 24h root Shoot Original data GEO bulk
323 atm3 -0.31 >More info -0.67 >More info Col0 whole plant Original data GEO bulk
324 WT leaves - Fe 0.43 >More info 0.55 >More info WT leaves + Fe Leaves Original data GEO bulk
325 6h +Pi -0.42 >More info -0.56 >More info 6h -Pi root Original data GEO bulk
326 root endodermis and quiescent center pH4.6 0.36 >More info 0.62 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
327 anac017-1 H2O2 3h -0.44 >More info -0.54 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
328 20d after anthesis 0.46 >More info 0.52 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
329 atmospheric CO2 low Mg shoot 0.52 >More info 0.45 >More info atmospheric CO2 normal Mg shoot Shoot Original data
330 Salt Stress 24 h (root) 0.42 >More info 0.55 >More info Stress mock 24 h (root) Original data Stress treatments
331 eds16 whole leaf 0h UI -0.32 >More info -0.65 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
332 miR393 flg22 2h 0.38 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
333 Stigma 0.46 >More info 0.51 >More info Seedling Original data GEO bulk
334 WT 24H Cold 0.41 >More info 0.56 >More info WT control Original data GEO bulk
335 WT cold 0.47 >More info 0.50 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
336 col-5 hrpA 2h 0.44 >More info 0.53 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
337 gh3.5D uninoculated -0.39 >More info -0.58 >More info Col-0 48 hpi Original data GEO bulk
338 Night Time Treatment 0.31 >More info 0.66 >More info Night Time Control 1hr white light pulse aerial rosette Original data
339 seedling 1.5h after Gamma atm-1 0.37 >More info 0.60 >More info seedling day 1 unirradiated atm-1 1.5h Original data
340 coi1-16 ein2 sid2 ozone 0.53 >More info 0.43 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
341 Mutant iaa5_6_19 0.31 >More info 0.65 >More info Col Original data GEO bulk
342 RRE2 Chitin 0.44 >More info 0.52 >More info Chitin Original data GEO bulk
343 msh1 variegation Col-0 0.36 >More info 0.60 >More info WT Col-0 above ground part of plant Original data GEO bulk
344 DC3000 7h 0.42 >More info 0.54 >More info Mock 7h DC3000 Original data GEO bulk
345 WT+H2O2 0.42 >More info 0.54 >More info WT H2O2 Original data GEO bulk
346 seedlings protease IV 0.41 >More info 0.55 >More info seedlings nontreated control whole seedling Original data
347 AsAKiin11 T2 0.45 >More info 0.51 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
348 D2O 0.50 >More info 0.45 >More info H2O seedling Original data GEO bulk
349 P.syringae AvrRpt2 4 h (leaf) 0.44 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
350 WT 3h -P 0.42 >More info 0.53 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
351 bio4-1 mutant watered00µM biotin leaves -0.43 >More info -0.52 >More info bio4-1 mutant leaves leaves Original data GEO bulk
352 phyABCDE Dark 0.41 >More info 0.54 >More info WT Dark Dark whole seedling Original data GEO bulk
353 WT salt 12 h 0.42 >More info 0.53 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
354 bak1-3 untreated 0.45 >More info 0.50 >More info WT untreated untreated Original data GEO bulk
355 WT AntimycinA 3h 0.42 >More info 0.53 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
356 Root -Cs 0.41 >More info 0.54 >More info Control-root Original data GEO bulk
357 Col-O high light 0.37 >More info 0.58 >More info Col-O bule light Original data GEO bulk
358 Col-0 V. longisporum-inoculated 48 hpi 0.30 >More info 0.65 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
359 col 24h4c set4 0.36 >More info 0.59 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
360 Norflurazon 0.38 >More info 0.56 >More info Col-0 Original data GEO bulk
361 Norflurazon 0.38 >More info 0.56 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
362 Col-0 drought 0.40 >More info 0.54 >More info Col-0 control Original data GEO bulk
363 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.52 >More info 0.42 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
364 abi4 vtc2 (I) 0.50 >More info 0.44 >More info Col (I) rosette Original data GEO bulk
365 Mutant sav3-2 (WL) 0.30 >More info 0.64 >More info Col-0 (WL) Original data GEO bulk
366 chito-octamer 0.37 >More info 0.57 >More info Col Mock Original data GEO bulk
367 (Col-0)+200 uM As 0.42 >More info 0.52 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
368 12h volatiles Sm. R3089 -0.36 >More info -0.58 >More info 12h untreated whole seedling Original data GEO bulk
369 sav3-2 light 0.30 >More info 0.64 >More info Col-0 light seedlings Original data GEO bulk
370 dde2-2 9 hpi A. brassicicola 0.32 >More info 0.62 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
371 Col leaves 120h LT 0.41 >More info 0.53 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
372 Wounding Stress3 h (shoot) 0.38 >More info 0.55 >More info Stress mock 3 h (shoot) Original data Stress treatments
373 Col-0 norflurazon 0.38 >More info 0.55 >More info Col-0 control Original data GEO bulk
374 Light 0.5h polysome-bound 0.38 >More info 0.55 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
375 24h volatiles Sm. R3089 -0.39 >More info -0.54 >More info 24h untreated whole seedling Original data GEO bulk
376 dark-hs 0.37 >More info 0.56 >More info dark-control seedling Original data
377 AZC 0.43 >More info 0.50 >More info noneHS Original data GEO bulk
378 Col-0 INA 6d 0.35 >More info 0.58 >More info Col-0 MOCK 6d Original data GEO bulk
379 WT flg22 1h 0.42 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
380 Transgenic LEC2GR Seedling 1h Dex 0.36 >More info 0.57 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
381 GO5; 8h switch to ambient CO2 concentrations; 0.34 >More info 0.59 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
382 eds16 whole leaf 7dpi -0.36 >More info -0.56 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
383 pil5 red light 0.39 >More info 0.53 >More info Col-0 red light Original data GEO bulk
384 GA 0.36 >More info 0.56 >More info none GA Rosette Original data GEO bulk
385 pho1 0.50 >More info 0.42 >More info Col2WT Original data GEO bulk
386 eif3h polysome 0.51 >More info 0.41 >More info WT polysome Original data GEO bulk
387 long 10-degree- 0.34 >More info 0.58 >More info control long Original data GEO bulk
388 rosettes drought 0.34 >More info 0.58 >More info rosettes watered Original data GEO bulk
389 cell culture 4 h phytoprostane A1 0.37 >More info 0.54 >More info cell culture 4 h control Original data GEO bulk
390 Stem tissue 2 days NAA 0.26 >More info 0.65 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
391 siliques AtHb1 control 0.39 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
392 Ovary 0.40 >More info 0.51 >More info Seedling Original data GEO bulk
393 OE WRKY63.3 0.35 >More info 0.56 >More info OE WRKY40.4 none leaf Original data GEO bulk
394 Oxidative Stress 3 h (root) -0.41 >More info -0.50 >More info Stress mock 3 h (root) Original data Stress treatments
395 Heat no recovery 0.34 >More info 0.57 >More info Mock no recovery seedling Original data GEO bulk
396 prors1-2 leaves 0.41 >More info 0.50 >More info Col-0 leaves leaves Original data
397 cat2-2; 8h switch to ambient CO2 concentrations; 0.50 >More info 0.40 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
398 arp6-10 24h at 27 ºC 0.52 >More info 0.38 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
399 sid2-PsmES4326-24hpi -0.36 >More info -0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
400 P.p 2.5hai 0.36 >More info 0.54 >More info At-Control roots Original data GEO bulk
401 ASL9-ox -0.40 >More info -0.50 >More info WT aerial parts of seedlings Original data GEO bulk
402 piffq 3d WL 0.37 >More info 0.53 >More info WT 3d WL whole seedling Original data GEO bulk
403 iae1 -0.35 >More info -0.55 >More info B179 Original data GEO bulk
404 whole roots 140 mM NaCl 1 hour 0.37 >More info 0.53 >More info whole roots standard Original data GEO bulk
405 Dex-rga(delta17) 2h GA4+DEX -0.36 >More info -0.54 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
406 atsf1-2 mutant seedling 0.40 >More info 0.50 >More info Col-0 seedling seedlings Original data
407 Dark 40min pls UV-AB 5min 0.32 >More info 0.58 >More info Dark 45 min Original data Light treatments
408 Col-0 HS 0.33 >More info 0.57 >More info Col-0 control heat shocked seedling Original data GEO bulk
409 WT (Col-0) heat shock 0.33 >More info 0.57 >More info WT (Col-0) whole seedling Original data GEO bulk
410 det2 light-dark -0.38 >More info -0.51 >More info det2 light light-dark Original data GEO bulk
411 Col laser microdissected 5 dpi 0.37 >More info 0.52 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
412 pad2-PsmES4326-24hpi -0.37 >More info -0.52 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
413 ulp1c ulp1d +Pto 0.38 >More info 0.51 >More info ulp1c ulp1d mock Original data GEO bulk
414 QK HS 0.35 >More info 0.54 >More info QK control heat shocked seedling Original data GEO bulk
415 Whole root - low pH 12H 0.37 >More info 0.52 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
416 phyABDE Dark 0.37 >More info 0.52 >More info WT Dark Dark whole seedling Original data GEO bulk
417 4C 7d 0.39 >More info 0.50 >More info 4C 0h Original data GEO bulk
418 ws 24h4c q8ws 0.39 >More info 0.50 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
419 Tsu-1 -Fe 24h 0.30 >More info 0.59 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
420 Tsu -Fe 24h Roots 0.30 >More info 0.59 >More info Tsu +Fe 24h Roots Original data GEO bulk
421 light-hs 0.32 >More info 0.56 >More info light-control seedling Original data
422 Dark 44min pls RedLigh 1min 0.36 >More info 0.52 >More info Dark 45 min Original data Light treatments
423 Genotoxic Stress 3 h (shoot) 0.22 >More info 0.66 >More info Stress mock 3 h (shoot) Original data Stress treatments
424 Fe starvation 72 h 0.36 >More info 0.52 >More info Control Original data GEO bulk
425 whole roots -Fe 72 hour 0.36 >More info 0.52 >More info whole roots standard Original data GEO bulk
426 30m light 0.15 >More info 0.73 >More info before light whole seedlings Original data GEO bulk
427 Light 0.5h steady-state 0.27 >More info 0.61 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
428 WT +elf18 2h 0.38 >More info 0.50 >More info WT untreated elf18 Original data GEO bulk
429 leaf13 0.36 >More info 0.52 >More info unwounded leaves none Original data GEO bulk
430 AvrRpm1 2 h (leaf) 0.31 >More info 0.57 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
431 erf5 erf6 -0.54 >More info -0.33 >More info WT+water water seedlings Original data GEO bulk
432 FAMA induced 48h 0.50 >More info 0.37 >More info control 48h Whole seedling Original data GEO bulk
433 Wounding Stress3 h (root) -0.36 >More info -0.51 >More info Stress mock 3 h (root) Original data Stress treatments
434 Mutant sav3-2 (SH) 0.26 >More info 0.61 >More info Col-0 (SH) Original data GEO bulk
435 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.37 >More info -0.50 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
436 npr1 sni1 brca2a SA -0.36 >More info -0.51 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
437 pif3 Dark 0h -0.21 >More info -0.66 >More info WT Dark 0h etiolated seedling Original data GEO bulk
438 rsa3-1 Na 24h 0.27 >More info 0.60 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
439 sav3-2 shade 0.26 >More info 0.61 >More info Col-0 shade seedlings Original data GEO bulk
440 IRP1-OE-Fe--shoot 0.35 >More info 0.52 >More info COL-0-Fe--shoot shoot Original data
441 ABA 3 h 0.29 >More info 0.58 >More info Mock 3 h Original data Basic hormone treatment of seedlings
442 Dark 40 min pls UV-A 5 min 0.29 >More info 0.58 >More info Dark 45 min Original data Light treatments
443 whole roots -Fe 48 hour 0.34 >More info 0.52 >More info whole roots standard Original data GEO bulk
444 9m.KCl 0.31 >More info 0.55 >More info To. KCl 14 day old Roots Original data GEO bulk
445 root cortex pH4.6 0.33 >More info 0.53 >More info root cortex pH5.7 Original data GEO bulk
446 Day Time Treatment 0.34 >More info 0.52 >More info Day Time Control 1hr white light pulse aerial rosette Original data
447 abi3-6 16 DAF Seed -0.34 >More info -0.52 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
448 FarRed Light 45min -0.15 >More info -0.71 >More info White Light 45min Original data Light treatments
449 8hr-pH4.5 0.35 >More info 0.51 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
450 pmr4-1 powdery mildew 0.28 >More info 0.58 >More info WT powdery mildew uninoculated Original data GEO bulk
451 Col-0 Flg22 4h 0.33 >More info 0.52 >More info Col-0 H2O 4h Original data GEO bulk
452 pepr1-1 Pepr2-3 untreated 0.30 >More info 0.55 >More info WT untreated untreated Original data GEO bulk
453 CeO2 germinant -0.33 >More info -0.52 >More info Millipore Water germinant CeO2 seedling Original data
454 WT +Pep2 2h 0.50 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
455 Selenate (root) 0.35 >More info 0.50 >More info Ws (root) Original data GEO bulk
456 npr1-3 MOCK 48h -0.28 >More info -0.57 >More info Col-0 MOCK 48h Original data GEO bulk
457 4C 24h 0.25 >More info 0.60 >More info 4C 0h Original data GEO bulk
458 Root Selenate 0.35 >More info 0.50 >More info Root control 40 micromolar selenate Root Original data GEO bulk
459 Mutant nph4-1_arf19-1 0.32 >More info 0.52 >More info Col Original data GEO bulk
460 Mutant axr3-1 (IAA) 0.29 >More info 0.55 >More info Col (IAA) Original data GEO bulk
461 penta mutant (higher order mutant) -0.31 >More info -0.53 >More info col control (higher order mutant) Original data GEO bulk
462 miR393 flg22 1h 0.34 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
463 tmm1-inflorescence-tips 0.33 >More info 0.51 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
464 WT H2O2 3h 0.32 >More info 0.52 >More info WT water 3h 3h_H2O2 Original data GEO bulk
465 short 8-degree- 0.27 >More info 0.57 >More info control short Original data GEO bulk
466 WT NAA 2h -0.25 >More info -0.59 >More info WT 0h Leaf tissue Original data GEO bulk
467 FHY3p dark+DEX -0.27 >More info -0.57 >More info FHY3p dark+mock Original data GEO bulk
468 Leaf wounded 0.24 >More info 0.60 >More info Leaf control vegetative leaf Original data GEO bulk
469 Col-7 Sucrose 0.31 >More info 0.52 >More info col-7 Original data GEO bulk
470 NJ15 0.27 >More info 0.56 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
471 whole roots 140 mM NaCl 4 hour 0.25 >More info 0.58 >More info whole roots standard Original data GEO bulk
472 INA 0.22 >More info 0.61 >More info CK INA seedling Original data
473 ABA 1 h 0.27 >More info 0.55 >More info Mock 1 h Original data Basic hormone treatment of seedlings
474 Cambium 5 days NAA 0.32 >More info 0.50 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
475 wavy 0.31 >More info 0.51 >More info WT Original data GEO bulk
476 dense canopy 0.31 >More info 0.51 >More info single (control) petiole Original data GEO bulk
477 rao2 H2O2 3h -0.31 >More info -0.51 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
478 WT 90-105 min Xanthomonas 0.31 >More info 0.51 >More info WT T0 Original data GEO bulk
479 SA 4mM 0.57 >More info 0.25 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
480 spx1 spx2 complete 0.52 >More info 0.29 >More info WT complete seedlings Original data
481 rosette Light Wounded 0.26 >More info 0.55 >More info rosette Light Control Original data GEO bulk
482 JA 0.29 >More info 0.52 >More info Col-0 mock Whole seedling Original data GEO bulk
483 Starch sheath 5 days MS incubation 0.28 >More info 0.53 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
484 Ws-2 high light 0.25 >More info 0.56 >More info Ws-2 low light Original data GEO bulk
485 chito-tetramer 0.24 >More info 0.57 >More info Col Mock Original data GEO bulk
486 miR393 0h -0.25 >More info -0.55 >More info WT 0h Leaf tissue Original data GEO bulk
487 toc1-1-73hr 0.27 >More info 0.53 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
488 rdr6-15 -0.30 >More info -0.50 >More info Col-0 Original data GEO bulk
489 piffq 2d WL 0.20 >More info 0.60 >More info WT 2d WL whole seedling Original data GEO bulk
490 IAA7mII over-expressor IAA Treated 0.11 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
491 short 10-degree- 0.25 >More info 0.54 >More info control short Original data GEO bulk
492 elf3-7-16ºC 0.29 >More info 0.50 >More info WT-16ºC Original data GEO bulk
493 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.29 >More info -0.50 >More info 2d dark-grown WT seedling Original data GEO bulk
494 piffq FR 1h 0.25 >More info 0.54 >More info WT FR 1h whole seedling Original data GEO bulk
495 Whole root - S 3H 0.28 >More info 0.51 >More info Whole root - S 0H Original data GEO bulk
496 Anoxia 0.22 >More info 0.57 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
497 oas-a1.1 root 0.20 >More info 0.57 >More info WT-Untreated Root Original data GEO bulk
498 AtMYB30-ox 2-4h Xanthomonas 0.54 >More info 0.22 >More info WT 2-4h Xanthomonas Original data GEO bulk
499 Red Light 45min -0.23 >More info -0.53 >More info White Light 45min Original data Light treatments
500 Got7 UV 0.23 >More info 0.53 >More info Got7 mock UV seedling Original data
501 seedling SPL13 -0.24 >More info -0.52 >More info seedling Col-0 Original data GEO bulk
502 Imbibed 24 h ABA 30uM (seed) 0.22 >More info 0.53 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
503 short 14-degree- 0.21 >More info 0.54 >More info control short Original data GEO bulk
504 msh1 recA3 untreated 0.12 >More info 0.63 >More info WT untreated above-ground parts Original data GEO bulk
505 eds16 whole leaf 1dpi -0.15 >More info -0.59 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
506 dsr1 -0.18 >More info -0.56 >More info WT mock Whole seedling Original data GEO bulk
507 root longitudinal zone-1 pH 4.6 0.17 >More info 0.57 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
508 Shoot -P -0.52 >More info -0.21 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
509 35SAvr 0.19 >More info 0.54 >More info Ecotype Col Original data GEO bulk
510 vte2 leaves 120h LT 0.68 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
511 Mutant iaa5_6_19(IAA) 0.15 >More info 0.57 >More info Col (IAA) Original data GEO bulk
512 Light 0.21 >More info 0.51 >More info Control Original data GEO bulk
513 WT+chitooctaose 0.18 >More info 0.54 >More info WT+water chitooctaose seedlings Original data GEO bulk
514 gid1a gid1b-1 gid1c-2 1 hr 100 uM GA3 0.19 >More info 0.53 >More info ga-1 1 hr 100 uM GA3 Original data GEO bulk
515 Rose Bengal 0.5 uM 0.22 >More info 0.50 >More info Control RB and PER Rose Bengal Original data
516 SA Treated 0.63 >More info 0.08 >More info Water Original data GEO bulk
517 Heat shock optimum 0.06 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
518 AFB1 0h 0.18 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
519 scl3 0.50 >More info 0.19 >More info Col-0 whole root Original data GEO bulk
520 pXVE:HA-EDM2-a untreated -0.16 >More info -0.52 >More info Col-0 untreated seedlings Original data GEO bulk
521 Col in Pi deficiency medium 0.17 >More info 0.50 >More info Col in control medium root Original data GEO bulk
522 SA 24h 0.16 >More info 0.51 >More info EtOH 24h 24hr Original data GEO bulk
523 4C 24h(SOIL) 0.14 >More info 0.53 >More info 4C 0h(SOIL) Original data GEO bulk
524 NahG -0.03 >More info -0.64 >More info Col-0 Leaves Original data GEO bulk
525 bri1-116 -0.06 >More info 0.73 >More info Col seedling Original data GEO bulk
526 15m.KCl 0.14 >More info 0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
527 46T-CK 0.16 >More info 0.50 >More info WT-CK none Original data
528 ABI3GR +DEX +CHX 0.07 >More info 0.56 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
529 Red Light 4 h -0.03 >More info -0.60 >More info White Light 4 h Original data Light treatments
530 Protoplast Induced 0.12 >More info 0.50 >More info Uninduced Original data GEO bulk
531 SA 3h 0.01 >More info 0.61 >More info EtOH 3h 3hr Original data GEO bulk
532 seed germinating in countinuous light 24h SL -0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
533 Estradiol4 days -0.02 >More info 0.62 >More info Col Original data GEO bulk
534 estradiol induced LEC1 -0.02 >More info 0.62 >More info control Original data GEO bulk
535 pvip1 pvip2 seedling 0.61 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
536 Dry pre-dawn 0.07 >More info 0.51 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
537 empty vector IAA Treated -0.04 >More info -0.50 >More info empty vector mock Original data GEO bulk
538 12m.KCl 0.04 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
539 pif5 high R/FR 0.02 >More info 0.52 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
540 IAA 1 h -0.01 >More info -0.52 >More info Mock 1 h Original data Basic hormone treatment of seedlings
541 Shoot apex inflorescence (after bolting) -0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
542 Col PSTDC3000 24h 0.65 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
543 HairpinZ 4 h (leaf) 0.55 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
544 root - 01% oxygen - 2h -0.05 >More info 0.54 >More info root - 21% oxygen - 2h Original data GEO bulk
545 root - 04% oxygen - 2h -0.16 >More info 0.64 >More info root - 21% oxygen - 2h Original data GEO bulk
546 Red/FR Light45min -0.07 >More info 0.51 >More info FarRed Light 45min Original data Light treatments
547 CCA1-ox 6am non-polysomal -0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
548 root - 04% oxygen - 30min -0.09 >More info 0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
549 P. infestans 6 h (leaf) 0.56 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
550 tt4 UV 0.19 >More info -0.54 >More info UV aerial region Original data GEO bulk
551 Light 3day hml -0.31 >More info 0.60 >More info 0h hml Original data