4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 35S:RPS4 eds1-2 2h
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List of experiments correlated with "35S:RPS4 eds1-2 2h"  Help Download transcriptome of top 30
Score Experiment Correlation from
35S:RPS4 eds1-2 2h		 Correlation to
35S:RPS4 eds1-2 2h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 35S:RPS4 eds1-2 2h 1.00 >More info 1.00 >More info 35S:RPS4 2h leaves Original data
2 npr1 sni1 brca2a SA 0.79 >More info 0.74 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
3 flu dark 8hours/30 minute light -0.73 >More info -0.79 >More info col dark 8hours/30 minute light Original data GEO bulk
4 ex2 flu dark 8hours/30 minute light -0.70 >More info -0.82 >More info col dark 8hours/30 minute light Original data GEO bulk
5 WT+chitooctaose -0.78 >More info -0.74 >More info WT+water chitooctaose seedlings Original data GEO bulk
6 chito-octamer -0.79 >More info -0.70 >More info Col Mock Original data GEO bulk
7 4C 2h(SOIL) -0.74 >More info -0.75 >More info 4C 0h(SOIL) Original data GEO bulk
8 WT chitooctaose -0.78 >More info -0.71 >More info WT water Original data GEO bulk
9 chito-tetramer -0.79 >More info -0.66 >More info Col Mock Original data GEO bulk
10 WT 3h -P -0.67 >More info -0.74 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
11 Cycloheximide 3 h -0.78 >More info -0.61 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
12 AtLysM RLK1 mutant chitooctaose 0.76 >More info 0.62 >More info WT chitooctaose Original data GEO bulk
13 GA -0.72 >More info -0.66 >More info none GA Rosette Original data GEO bulk
14 Col-0 DCA 48h -0.71 >More info -0.67 >More info Col-0 MOCK 48h Original data GEO bulk
15 A. thaliana-A. lyrata hybrid 0.74 >More info 0.63 >More info A. thaliana mature leaves before flowering Original data GEO bulk
16 npr1 sni1 SA -0.78 >More info -0.58 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
17 seedlings protease IV -0.74 >More info -0.61 >More info seedlings nontreated control whole seedling Original data
18 coi1-2 -0.70 >More info -0.64 >More info Col-0 mock Whole seedling Original data GEO bulk
19 HARAP aerobic 0.70 >More info 0.64 >More info WT aerobic aerobic Original data GEO bulk
20 FLIGHT TAGESB plate6 ROOTS -0.70 >More info -0.64 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
21 Chitin -0.76 >More info -0.57 >More info Col C Original data GEO bulk
22 dde2-2 9 hpi A. brassicicola -0.72 >More info -0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
23 anac017-2 AntimycinA 3h 0.77 >More info 0.56 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
24 WT AntimycinA 3h -0.74 >More info -0.59 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
25 Col-Luc WT 3h antimycin A -0.77 >More info -0.56 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
26 aba1 hypocotyl -0.72 >More info -0.60 >More info Ler hypocotyl hypocotyl Original data GEO bulk
27 35S:RPS4 eds1-2 8h 0.76 >More info 0.55 >More info 35S:RPS4 8h leaves Original data
28 WT-Dry -0.71 >More info -0.58 >More info WT-CK dehydration treatment 1h Original data
29 pepr1-1 Pepr2-3 +Pep2 2h 0.72 >More info 0.57 >More info WT +Pep2 2h Pep2 Original data GEO bulk
30 Col-0 INA 48h -0.64 >More info -0.64 >More info Col-0 MOCK 48h Original data GEO bulk
31 bak1-3 +Pep2 2h -0.64 >More info -0.64 >More info WT +Pep2 2h Pep2 Original data GEO bulk
32 CLO 4mM -0.70 >More info -0.57 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
33 1h +Pi 0.67 >More info 0.60 >More info 1h -Pi root Original data GEO bulk
34 Light -0.66 >More info -0.60 >More info Control Original data GEO bulk
35 bHLH122 ox 0.64 >More info 0.61 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
36 Leaf wounded -0.63 >More info -0.61 >More info Leaf control vegetative leaf Original data GEO bulk
37 epiF3 0.75 >More info 0.48 >More info WT Col-0 aerial part Original data
38 Col ozone 3h -0.65 >More info -0.58 >More info Col clean-air 3h ozone Original data GEO bulk
39 4C 1h -0.55 >More info -0.67 >More info 4C 0h Original data GEO bulk
40 sid2-1 cold 0.69 >More info 0.53 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
41 seedlings-week-old RECA1-overexpressing
transgenic		 -0.69 >More info -0.53 >More info seedlings-week-old Col-0 seedlings Original data
42 irradiated leaf (cmt 5d) -0.66 >More info -0.55 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
43 WT 3H Cold -0.61 >More info -0.60 >More info WT control Original data GEO bulk
44 rosette Light Wounded -0.68 >More info -0.53 >More info rosette Light Control Original data GEO bulk
45 OE WRKY63.3 high light -0.58 >More info -0.63 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
46 phyB mutant 22C 10hrs 0.50 >More info 0.71 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
47 rosette Dark Wounded -0.67 >More info -0.53 >More info rosette Dark Control Original data GEO bulk
48 camta3-2 -0.66 >More info -0.54 >More info WT Original data GEO bulk
49 Selenate (root) -0.73 >More info -0.47 >More info Ws (root) Original data GEO bulk
50 Root Selenate -0.73 >More info -0.47 >More info Root control 40 micromolar selenate Root Original data GEO bulk
51 P.p 2.5hai -0.69 >More info -0.51 >More info At-Control roots Original data GEO bulk
52 camta3-1 -0.65 >More info -0.54 >More info WT Original data GEO bulk
53 WT 2-4h Xanthomonas -0.70 >More info -0.49 >More info WT T0 Original data GEO bulk
54 Mutant siz1-3 (Drought) -0.68 >More info -0.51 >More info Col-0 (Drought) Original data GEO bulk
55 siz1-3 drought -0.68 >More info -0.51 >More info Col-0 drought Original data GEO bulk
56 WT flg22 2h -0.62 >More info -0.57 >More info WT 0h Leaf tissue Original data GEO bulk
57 myb61 cork -0.66 >More info -0.53 >More info wt cork cork Original data GEO bulk
58 ataf1-1 mutant Col-0 Bgh inoculated -0.74 >More info -0.45 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
59 TNT-seedlings -0.67 >More info -0.51 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
60 seedling 6h after HZE WT -0.72 >More info -0.46 >More info seedling day 1 unirradiated WT 6h Original data
61 ein2-1 9 hpi A. brassicicola -0.75 >More info -0.42 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
62 smg7b-1 -0.70 >More info -0.47 >More info WT whole plant Original data GEO bulk
63 35S:RPS4 eds1-2 24h 0.71 >More info 0.46 >More info 35S:RPS4 24h leaves Original data
64 INA -0.50 >More info -0.66 >More info CK INA seedling Original data
65 seedling 12h after HZE WT -0.68 >More info -0.48 >More info seedling day 1 unirradiated WT 12h Original data
66 downy mildew cotyledons late stage -0.67 >More info -0.49 >More info mock inoculated Cotyledons Original data GEO bulk
67 WT flg22 1h -0.66 >More info -0.50 >More info WT 0h Leaf tissue Original data GEO bulk
68 aba2 1% sucrose 12-day-old -0.54 >More info -0.62 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
69 Protoplast Induced -0.51 >More info -0.65 >More info Uninduced Original data GEO bulk
70 abi1 hypocotyl -0.58 >More info -0.58 >More info Ler hypocotyl hypocotyl Original data GEO bulk
71 Rose Bengal 0.5 uM -0.64 >More info -0.51 >More info Control RB and PER Rose Bengal Original data
72 oligomycin 4 h -0.68 >More info -0.47 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
73 rsa3-1 Na 24h -0.58 >More info -0.57 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
74 Infected pft1 leaf -0.64 >More info -0.51 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
75 WT NAA/flg 1h -0.66 >More info -0.49 >More info WT 0h Leaf tissue Original data GEO bulk
76 vtc1 (II) -0.72 >More info -0.43 >More info Col (II) rosette Original data GEO bulk
77 dorn1-1 Root 100 mM ATP 30 min 0.60 >More info 0.54 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
78 miR393 flg22 1h -0.65 >More info -0.49 >More info WT 0h Leaf tissue Original data GEO bulk
79 HARAP hypoxic -0.66 >More info -0.48 >More info hypoxic hypoxia Original data GEO bulk
80 GST NPP1 4 h (leaf) -0.69 >More info -0.45 >More info Mock 4 h (leaf) Original data Elicitor treatments
81 cpr5scv1 -0.72 >More info -0.41 >More info WT(COL) Original data GEO bulk
82 protoplasts T1 [flg22] -0.64 >More info -0.49 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
83 Laer Flg22+GA 1h -0.71 >More info -0.42 >More info Laer Control leaf discs Original data GEO bulk
84 WT 6H Cold -0.62 >More info -0.51 >More info WT control Original data GEO bulk
85 35S::MBF1c -0.66 >More info -0.46 >More info control Original data GEO bulk
86 P.p 10.5hai -0.68 >More info -0.44 >More info At-Control roots Original data GEO bulk
87 max4 hypocotyl -0.63 >More info -0.49 >More info wt hypocotyl hypocotyl Original data GEO bulk
88 WT-NOCO2 INFECTED -0.74 >More info -0.38 >More info WT-MOCK Original data GEO bulk
89 DFPM -0.65 >More info -0.47 >More info control Original data GEO bulk
90 Mutant NahG(leaf) 0.59 >More info 0.53 >More info Col-0 (leaf) Original data GEO bulk
91 CMV-WT -0.70 >More info -0.42 >More info Mock-At Aerial tissues Original data GEO bulk
92 npr1 sni1 ssn2 SA 0.71 >More info 0.41 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
93 Col-0 9 hpi A. brassicicola -0.69 >More info -0.43 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
94 AgNO3 3 h -0.71 >More info -0.41 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
95 UV Stress 24 h (shoot) -0.65 >More info -0.46 >More info Stress mock 24 h (shoot) Original data Stress treatments
96 cs26 long day -0.68 >More info -0.43 >More info Leaves-WT-LD leaf Original data GEO bulk
97 GST 4 h (leaf) -0.65 >More info -0.46 >More info Mock 4 h (leaf) Original data Elicitor treatments
98 Col-0 2HS -0.63 >More info -0.48 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
99 S58-2 -0.63 >More info -0.48 >More info wt Original data GEO bulk
100 Leaf systemic -0.61 >More info -0.50 >More info Leaf control vegetative leaf Original data GEO bulk
101 bio4-1 mutant watered00µM biotin leaves 0.64 >More info 0.47 >More info bio4-1 mutant leaves leaves Original data GEO bulk
102 Bur-0-30min IAA -0.71 >More info -0.40 >More info Bur-0h IAA whole plant Original data GEO bulk
103 atr mock -0.71 >More info -0.40 >More info WT mock shoot apical meristem Original data
104 irradiated leaf (WT 1d) -0.77 >More info -0.33 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
105 Col in Pi deficiency medium -0.53 >More info -0.57 >More info Col in control medium root Original data GEO bulk
106 camta2/3 warm -0.63 >More info -0.47 >More info WT warm entire aerial part Original data GEO bulk
107 Bur-0-3h IAA -0.70 >More info -0.40 >More info Bur-0h IAA whole plant Original data GEO bulk
108 vtc2 mature somatic embryo -0.62 >More info -0.48 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
109 OsSAP11 expressing 0.57 >More info 0.53 >More info WT seedlings Original data GEO bulk
110 coi1-16 ein2 sid2 ozone -0.75 >More info -0.35 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
111 A. lyrata 0.62 >More info 0.48 >More info A. thaliana mature leaves before flowering Original data GEO bulk
112 9 hr Hypoxia 1 hr recovery IP RNA -0.68 >More info -0.42 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
113 Homozygous-AtcesA4 0.59 >More info 0.51 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
114 AFB1 flg22 1h -0.66 >More info -0.44 >More info WT 0h Leaf tissue Original data GEO bulk
115 AvrRpt2 Col-0 6hpi -0.68 >More info -0.41 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
116 myb61 xylem -0.59 >More info -0.50 >More info wt xylem xylem Original data GEO bulk
117 WT+H2O2 -0.60 >More info -0.49 >More info WT H2O2 Original data GEO bulk
118 cpr5npr1 -0.69 >More info -0.40 >More info WT(COL) Original data GEO bulk
119 cpr5 -0.60 >More info -0.49 >More info WT seedling Original data GEO bulk
120 Laer Flg22 1h -0.71 >More info -0.37 >More info Laer Control leaf discs Original data GEO bulk
121 Col-0 ozone- (control genotype coi1-16 ein2 sid2) -0.70 >More info -0.38 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
122 sfr6 drought 0.56 >More info 0.52 >More info WT drought All aerial tissue Original data GEO bulk
123 CMP 4hr -0.67 >More info -0.41 >More info Acetone 4hr root Original data GEO bulk
124 Col-0-30min IAA -0.77 >More info -0.31 >More info Col-0-0h IAA whole plant Original data GEO bulk
125 TA induced -0.56 >More info -0.52 >More info Methanol TA Suspension cells Original data GEO bulk
126 LTN008-2 aza-dc -0.74 >More info -0.34 >More info LTN012-2 Mock Original data
127 Lipopolysaccaride4 h (leaf) -0.63 >More info -0.45 >More info Mock 4 h (leaf) Original data Elicitor treatments
128 WT seedlings MV -0.68 >More info -0.39 >More info WT seedlings control Seedlings Original data GEO bulk
129 pad4-PsmES4326-24hpi 0.64 >More info 0.43 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
130 anac017-1 H2O2 3h 0.63 >More info 0.44 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
131 Col-0-3h IAA -0.73 >More info -0.34 >More info Col-0-0h IAA whole plant Original data GEO bulk
132 Cor hrpS 10h -0.62 >More info -0.45 >More info Mock 10h Cor hrpS Original data GEO bulk
133 pho1 -0.60 >More info -0.47 >More info Col2WT Original data GEO bulk
134 46T-Dry -0.60 >More info -0.47 >More info WT-Dry dehydration treatment 1h Original data
135 sni1 -0.59 >More info -0.48 >More info WT Original data GEO bulk
136 Col-0 ozone -0.70 >More info -0.37 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
137 BLM+INA -0.60 >More info -0.47 >More info CK BLM and INA seedling Original data
138 WT no Pi -0.70 >More info -0.37 >More info WT complete seedlings Original data
139 flu -0.64 >More info -0.42 >More info WT Col Original data GEO bulk
140 msh1 albino -0.72 >More info -0.34 >More info WT aerial part Original data GEO bulk
141 ein5-1 ski2-3 -0.62 >More info -0.44 >More info Col-0 aerial tissue Original data
142 hrpA fliC 7h -0.51 >More info -0.55 >More info Mock 7h hrpA fliC Original data GEO bulk
143 flu over-tAPX -0.65 >More info -0.41 >More info WT Col Original data GEO bulk
144 M6PR transgenic 0mM NaCl -0.60 >More info -0.45 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
145 psae1-3 stn7-1 -0.67 >More info -0.38 >More info WS rosette leaves Original data GEO bulk
146 cpr5 -0.62 >More info -0.43 >More info WT(COL) Original data GEO bulk
147 C24 ozone -0.73 >More info -0.32 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
148 inhibitor A Treated -0.67 >More info -0.38 >More info Negative Control Original data GEO bulk
149 Te ozone -0.71 >More info -0.34 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
150 FLIGHT TAGESB plate6 SHOOTS -0.63 >More info -0.42 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
151 bri1-116 0.32 >More info 0.73 >More info Col seedling Original data GEO bulk
152 Phaseolicola 2 h (leaf) -0.58 >More info -0.47 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
153 Bur-0-1h IAA -0.69 >More info -0.36 >More info Bur-0h IAA whole plant Original data GEO bulk
154 Col-0 RNAi-MBS2/mbs1-1 HL 3h 0.50 >More info 0.54 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
155 Primisulfuron EC50 -0.66 >More info -0.38 >More info Carrier (primisulfuron) Original data GEO bulk
156 P.p 6hai -0.70 >More info -0.34 >More info At-Control roots Original data GEO bulk
157 camta1/2/3 24h cold -0.60 >More info -0.44 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
158 sid2-avrB-6h -0.58 >More info -0.46 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
159 efr-1 +elf18 10h 0.60 >More info 0.44 >More info WT +elf18 10h elf18 Original data GEO bulk
160 P.syringae AvrRpt2 4 h (leaf) -0.54 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
161 PstDC3000 48h -0.37 >More info -0.67 >More info WT untreated 48hr leaf Original data GEO bulk
162 ani1 T0.5 0.59 >More info 0.44 >More info WT T0.5 root tissue Original data GEO bulk
163 CT101 ozone -0.70 >More info -0.33 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
164 ORS1 induced -0.64 >More info -0.39 >More info mock-induced rosette leaves Original data GEO bulk
165 S14-150 -0.58 >More info -0.45 >More info wt Original data GEO bulk
166 aba3-1 -0.64 >More info -0.39 >More info wt Original data GEO bulk
167 Col leaf 100mM NaCl -0.65 >More info -0.38 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
168 pmr5 pmr6 -0.67 >More info -0.36 >More info Col-0 Original data GEO bulk
169 Col leaf 100mM NaCl -0.65 >More info -0.38 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
170 Col-0-1h IAA -0.72 >More info -0.31 >More info Col-0-0h IAA whole plant Original data GEO bulk
171 Col 100mM NaCl -0.65 >More info -0.38 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
172 WT Col-0 Bgh inoculated -0.65 >More info -0.38 >More info WT Col-0 Un-inoculated Original data GEO bulk
173 SA 4mM -0.74 >More info -0.29 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
174 Col(gl) 0mM NaCl -0.55 >More info -0.47 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
175 oas-a1.1 Cd 18h -0.66 >More info -0.36 >More info Cd 18h root Root Original data GEO bulk
176 amiRAP aerobic 0.60 >More info 0.42 >More info WT aerobic aerobic Original data GEO bulk
177 ARR22-ox 0.54 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
178 CDB1-Knockout 0.58 >More info 0.44 >More info WT Original data GEO bulk
179 Col(gl) leaf 0mM NaCl -0.55 >More info -0.47 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
180 Elevated CO2 AMPLE N DAY -0.61 >More info -0.41 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
181 til1-1 22C -0.59 >More info -0.43 >More info Col-0 22C Original data GEO bulk
182 oligomycin 1 h -0.59 >More info -0.43 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
183 IAA/inhibitor A Treated -0.68 >More info -0.33 >More info IAA Treated Original data GEO bulk
184 gai MeJA 1h 0.62 >More info 0.39 >More info Laer MeJA 1h leaf discs Original data GEO bulk
185 SOS1 0mM NaCl -0.68 >More info -0.33 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
186 Col-0 ozone- (control genotype tga2 tag5 tga6) -0.67 >More info -0.34 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
187 UV -0.66 >More info -0.35 >More info WT aerial region Original data GEO bulk
188 pmr5 -0.62 >More info -0.39 >More info Col-0 Original data GEO bulk
189 csn5 (csn5a-2 csn5b) light -0.64 >More info -0.37 >More info WT light Original data GEO bulk
190 coi1-16 ein2 sid2 ctrl 0.69 >More info 0.32 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
191 myb3 myb3r4d -0.53 >More info -0.48 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
192 tbf1-mock infiltration 0.62 >More info 0.39 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
193 IXB induced -0.49 >More info -0.52 >More info Methanol IXB Suspension cells Original data GEO bulk
194 cys-c1 root 0.65 >More info 0.35 >More info Root-WT roots Original data GEO bulk
195 high R/FR JA spray 0.64 >More info 0.36 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk
196 bak1-3 +Pep2 10h -0.62 >More info -0.38 >More info WT +Pep2 10h Pep2 Original data GEO bulk
197 AFB1 flg22 2h -0.60 >More info -0.40 >More info WT 0h Leaf tissue Original data GEO bulk
198 9 hr Hypoxia 1 hr recovery Total RNA -0.62 >More info -0.38 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
199 M6PR transgenic leaf 100mM NaCl 0.58 >More info 0.42 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
200 Col whole leaf 7dpi -0.67 >More info -0.33 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
201 col-5 hrpA 12h -0.57 >More info -0.43 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
202 ex1 flu dark 8hours/30 minute light -0.49 >More info -0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
203 estradiole-induced ANAC059 -0.45 >More info -0.55 >More info transgenic (empty vector inducible system) Original data GEO bulk
204 wnk8-1 untreated 0.44 >More info 0.56 >More info Col-0 untreated seedlings Original data GEO bulk
205 dense canopy -0.45 >More info -0.55 >More info single (control) petiole Original data GEO bulk
206 WT drought -0.49 >More info -0.51 >More info WT control All aerial tissue Original data GEO bulk
207 3x(m) -0.38 >More info -0.62 >More info 2x two week old seedlings Original data
208 eds16 whole leaf 5dpi 0.58 >More info 0.41 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
209 OE WRKY40.4 0.58 >More info 0.41 >More info OE WRKY40.4 none leaf Original data GEO bulk
210 Mutant siz1-3 -0.56 >More info -0.43 >More info Col-0 Original data GEO bulk
211 TaFLS overexpression line (OE2) 0.63 >More info 0.36 >More info Col-0 Rosette leaves Original data
212 ckh1 CK200 -0.65 >More info -0.34 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
213 siz1-3 control -0.56 >More info -0.43 >More info Col-0 control Original data GEO bulk
214 Flagellin 4 h (leaf) -0.58 >More info -0.41 >More info Mock 4 h (leaf) Original data Elicitor treatments
215 Salt Stress 24 h (root) -0.62 >More info -0.37 >More info Stress mock 24 h (root) Original data Stress treatments
216 wnk8-2 untreated 0.48 >More info 0.51 >More info Col-0 untreated seedlings Original data GEO bulk
217 seedling 24h after HZE WT -0.66 >More info -0.32 >More info seedling day 2 unirradiated WT 24h Original data
218 E.coli TUV86 2 fliC 7h -0.55 >More info -0.43 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
219 camta1/3 warm -0.60 >More info -0.38 >More info WT warm entire aerial part Original data GEO bulk
220 Cor 24h -0.68 >More info -0.30 >More info Mock 24h Cor Original data GEO bulk
221 WT-SA -0.57 >More info -0.41 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
222 WT powdery mildew -0.58 >More info -0.40 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
223 Col whole leaf 5dpi -0.61 >More info -0.37 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
224 vte2 leaves 48h LT -0.55 >More info -0.43 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
225 shoots bhlh100/101 100uM Fe -0.50 >More info -0.48 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
226 opr3 OPDA 0.5 h -0.32 >More info -0.66 >More info opr3 0 h Original data GEO bulk
227 axr1 hypocotyl -0.55 >More info -0.42 >More info wt hypocotyl hypocotyl Original data GEO bulk
228 E.coli 0157 H7 7h -0.56 >More info -0.41 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
229 1hr-pH4.5 -0.54 >More info -0.43 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
230 miR 0h -0.55 >More info -0.42 >More info Col 0h Leaf Original data GEO bulk
231 cpr5npr1svi1 -0.65 >More info -0.32 >More info WT(COL) Original data GEO bulk
232 D2O -0.58 >More info -0.39 >More info H2O seedling Original data GEO bulk
233 P.p 30hai -0.65 >More info -0.32 >More info At-Control roots Original data GEO bulk
234 root cells epidermis and lateral root cap -Fe -0.62 >More info -0.35 >More info whole roots standard Original data GEO bulk
235 albino Ds13-2198-1 0.56 >More info 0.40 >More info control Original data GEO bulk
236 root Dosed gold -0.68 >More info -0.28 >More info root No gold .125 mM gold 24 h roots Original data
237 WT in -N -0.68 >More info -0.28 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
238 IRP1-OE-Ctrl--root -0.56 >More info -0.40 >More info COL-0-Ctrl--root root Original data
239 0.125 mM gold 24 h -0.68 >More info -0.28 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
240 WT +elf18 2h -0.54 >More info -0.42 >More info WT untreated elf18 Original data GEO bulk
241 (Col-0)+100 uM As -0.61 >More info -0.35 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
242 camta1/2/3 warm -0.59 >More info -0.37 >More info WT warm entire aerial part Original data GEO bulk
243 Triazolopyrimidine EC50 -0.62 >More info -0.34 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
244 spx1 spx2 resupplied Pi 4h 0.72 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
245 edr1 36 h powdery mildew -0.59 >More info -0.37 >More info Col-0 36 h powdery mildew Original data GEO bulk
246 GO5; 8h switch to ambient CO2 concentrations; -0.59 >More info -0.37 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
247 Cor 10h -0.58 >More info -0.38 >More info Mock 10h Cor Original data GEO bulk
248 Sulfometuron EC50 -0.62 >More info -0.34 >More info Carrier Original data GEO bulk
249 Col whole leaf 1dpi 0.57 >More info 0.39 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
250 35S:RPS4 eds1-2 T0 0.06 >More info 0.90 >More info 35S:RPS4 T0 leaves Original data
251 mbd11 mutant thaliana 10-day-old seedling -0.56 >More info -0.39 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
252 wavy -0.56 >More info -0.39 >More info WT Original data GEO bulk
253 9 hr Hypoxia IP RNA -0.55 >More info -0.40 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
254 WT +elf18 10h -0.55 >More info -0.40 >More info WT untreated elf18 Original data GEO bulk
255 edr1 18 h powdery mildew -0.56 >More info -0.39 >More info Col-0 18 h powdery mildew Original data GEO bulk
256 Roots Cd 0.65 >More info 0.30 >More info Roots control Cd Root Original data GEO bulk
257 vtc2 (I) -0.58 >More info -0.37 >More info Col (I) rosette Original data GEO bulk
258 -Sulfate 2 h -0.50 >More info -0.45 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
259 upf3 -0.59 >More info -0.36 >More info WT whole plant Original data GEO bulk
260 Col-0-avrB-6h -0.57 >More info -0.38 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
261 WUSp cells -0.54 >More info -0.40 >More info Protoplast Induced Original data GEO bulk
262 hrpA 7h -0.56 >More info -0.38 >More info Mock 7h hrpA Original data GEO bulk
263 bZIP1ko mutant N+Light- -0.55 >More info -0.39 >More info WT-sib N+Light- whole plant Original data GEO bulk
264 wrky33 Bc inoculation 14h -0.73 >More info -0.21 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
265 csn3-1 light -0.61 >More info -0.33 >More info WT light Original data GEO bulk
266 Dex-rga(delta17) 4h GA4+DEX 0.57 >More info 0.37 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
267 ceh1 mutant -0.59 >More info -0.35 >More info Parent line Original data
268 IAA/inhibitor B Treated -0.63 >More info -0.31 >More info IAA Treated Original data GEO bulk
269 eds16 whole leaf 0h UI 0.51 >More info 0.43 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
270 Octopus overexpressor 35SDYG25 -0.53 >More info -0.41 >More info WS Original data GEO bulk
271 Cold Stress 24 h (root) -0.59 >More info -0.35 >More info Stress mock 24 h (root) Original data Stress treatments
272 safener treated -0.54 >More info -0.39 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
273 S15-118 -0.65 >More info -0.28 >More info wt Original data GEO bulk
274 col-5 DC3000 12h -0.56 >More info -0.37 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
275 2 hr Hypoxia Total RNA -0.57 >More info -0.36 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
276 Leafminer systemically damaged thaliana seedlings -0.64 >More info -0.29 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
277 C24-3h IAA -0.60 >More info -0.33 >More info C24-0h IAA whole plant Original data GEO bulk
278 35S::ERF104 Flg22 4h -0.57 >More info -0.36 >More info 35S::ERF104 H2O 4h Original data GEO bulk
279 OsRLCK253 expressing 0.53 >More info 0.39 >More info WT seedlings Original data GEO bulk
280 miR393 flg22 2h -0.53 >More info -0.39 >More info WT 0h Leaf tissue Original data GEO bulk
281 R. solani AG8 -0.64 >More info -0.28 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
282 8hr-pH4.5 -0.63 >More info -0.29 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
283 AvrRpm1 2 h (leaf) -0.59 >More info -0.33 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
284 CMV-A2b mutant -0.63 >More info -0.29 >More info Mock-At Aerial tissues Original data GEO bulk
285 gir flower 33d -0.63 >More info -0.29 >More info Col-7 flower 33d flower Original data GEO bulk
286 15m.KCl -0.51 >More info -0.41 >More info To. KCl 14 day old Roots Original data GEO bulk
287 AtMYB30-ox 2-4h Xanthomonas -0.35 >More info -0.57 >More info WT 2-4h Xanthomonas Original data GEO bulk
288 upf1 -0.56 >More info -0.35 >More info WT whole plant Original data GEO bulk
289 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.68 >More info 0.23 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
290 C24-30min IAA -0.66 >More info -0.25 >More info C24-0h IAA whole plant Original data GEO bulk
291 atmospheric CO2 low Mg shoot -0.63 >More info -0.28 >More info atmospheric CO2 normal Mg shoot Shoot Original data
292 SLWF infested -0.53 >More info -0.38 >More info SLWF uninfested rosette tissue Original data GEO bulk
293 Elevated CO2 AMPLE N NIGHT -0.60 >More info -0.31 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
294 toc1-1-49hr -0.60 >More info -0.31 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
295 ataf1-1 mutant Col-0 Un-inoculated 0.69 >More info 0.22 >More info WT Col-0 Un-inoculated Original data GEO bulk
296 WT H2O2 3h -0.57 >More info -0.34 >More info WT water 3h 3h_H2O2 Original data GEO bulk
297 Whole root - low pH 30min -0.50 >More info -0.41 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk
298 protoplasts T2 [flg22] -0.52 >More info -0.38 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
299 seedlings +5AC -0.67 >More info -0.23 >More info control seedlings 10-day old whole seedling Original data GEO bulk
300 sav1-1 light -0.54 >More info -0.36 >More info Col-0 light seedlings Original data GEO bulk
301 Col-0 37C -0.63 >More info -0.27 >More info Col-0 22C Original data GEO bulk
302 pepr1-1 Pepr2-3 +Pep2 10h 0.50 >More info 0.40 >More info WT +Pep2 10h Pep2 Original data GEO bulk
303 bio4-1 mutant leaves -0.65 >More info -0.25 >More info WT leaves leaves Original data GEO bulk
304 Dex-rga(delta17) 2h GA4+DEX 0.57 >More info 0.33 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
305 abi4-102 (II) -0.58 >More info -0.32 >More info Col (II) rosette Original data GEO bulk
306 gai Flg22 1h 0.58 >More info 0.32 >More info Laer Flg22 1h leaf discs Original data GEO bulk
307 Light 3day wt 0.57 >More info 0.33 >More info 0h wt Original data
308 pvip1 pvip2 -0.60 >More info -0.30 >More info Col-0 whole rosettes Original data GEO bulk
309 anac017-2 H2O2 3h 0.57 >More info 0.33 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
310 JA 24h 0.56 >More info 0.33 >More info EtOH 24h 24hr Original data GEO bulk
311 Atwrky63 0.68 >More info 0.21 >More info Col0 none leaf Original data GEO bulk
312 Seedling KUA1-IOX est -0.51 >More info -0.38 >More info Seedling KUA1-IOX mock Original data
313 oas-a1.1 Cd 24h -0.52 >More info -0.37 >More info Cd 24h root Shoot Original data GEO bulk
314 sid2-2 24hpi A. brassicicola 0.51 >More info 0.38 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
315 Laer Flg22+GA 2h -0.63 >More info -0.26 >More info Laer Control leaf discs Original data GEO bulk
316 CAX1/CAX3 mutant -0.61 >More info -0.28 >More info Col whole plant Original data GEO bulk
317 WT leaves - Fe -0.63 >More info -0.26 >More info WT leaves + Fe Leaves Original data GEO bulk
318 OH1 -0.53 >More info -0.36 >More info Col-0 leaves Original data GEO bulk
319 ice1 control -0.58 >More info -0.31 >More info WT control Original data GEO bulk
320 WT NAA/flg 2h -0.57 >More info -0.32 >More info WT 0h Leaf tissue Original data GEO bulk
321 WT cold -0.58 >More info -0.31 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
322 HopZ1a treated -0.57 >More info -0.32 >More info col Original data GEO bulk
323 low CO2 + light -0.51 >More info -0.37 >More info normal CO2 + light Original data GEO bulk
324 35:SUB1A -0.60 >More info -0.28 >More info WT whole seedling Original data GEO bulk
325 eds16 whole leaf 6hpi 0.38 >More info 0.50 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
326 phr1 Root-Pi -0.59 >More info -0.29 >More info WT Root+Pi roots Original data GEO bulk
327 penta Pst DC3000 12hpi -0.59 >More info -0.29 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
328 spx1 spx2 no Pi -0.54 >More info -0.33 >More info WT no Pi seedlings Original data
329 whole roots 140 mM NaCl 30 minutes -0.54 >More info -0.33 >More info whole roots standard Original data GEO bulk
330 (Col-0)+200 uM As -0.55 >More info -0.32 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
331 irradiated leaf (cmt 1d) -0.65 >More info -0.22 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
332 Col-0 under 4 days salt -0.65 >More info -0.22 >More info Col-0 under control 4 days salt treatment rosette Original data
333 pnp1-1 1wk +P -0.59 >More info -0.28 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
334 rli -0.59 >More info -0.28 >More info WT whole plant Original data GEO bulk
335 shoot hypoxia total -0.52 >More info -0.34 >More info shoot control total Original data GEO bulk
336 stn7-1 0.66 >More info 0.20 >More info Col-0 rosette leaves Original data GEO bulk
337 ga1-3 SCL3OE 0.52 >More info 0.34 >More info ga1-3 whole root Original data
338 shoot-10 μM DEX- 6 hr -0.58 >More info -0.28 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
339 sid2-2 9 hpi A. brassicicola -0.62 >More info -0.24 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
340 IMI 4mM -0.65 >More info -0.21 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
341 Shoot apex inflorescence (after bolting) 0.20 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
342 Laer pretreat JA Flg22 1h -0.64 >More info -0.21 >More info Laer pretreat water control leaf discs Original data GEO bulk
343 xrn4-5 flower 0.59 >More info 0.26 >More info Col-0 flower inflorescence Original data GEO bulk
344 Col-0 mbs1-1 HL 3h 0.57 >More info 0.28 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
345 cs26 short-day 0.57 >More info 0.28 >More info Leaves-WT-SD leaf Original data GEO bulk
346 auxin and brassinazole seedlings -0.63 >More info -0.22 >More info auxin seedlings Original data GEO bulk
347 WT 30μM arsenate 8 hours. -0.58 >More info -0.27 >More info WT control (not supplemented). Original data
348 Nicotinamide-65hr -0.62 >More info -0.23 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
349 Elevated CO2 fully expanded leaf -0.52 >More info -0.32 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
350 WT Bc inoculation 14h -0.67 >More info -0.17 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
351 pnp1-1 1wk -P -0.51 >More info -0.33 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
352 vtc2-1 0.65 >More info 0.19 >More info Col-0 whole plant Original data GEO bulk
353 IAA 0.5 h -0.67 >More info -0.17 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
354 Col-0 SA -0.54 >More info -0.30 >More info Col-0 Original data GEO bulk
355 toc1-1-57hr -0.50 >More info -0.34 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
356 Nicotinamide-57hr -0.54 >More info -0.30 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
357 Col-0 V. longisporum-inoculated 48 hpi -0.60 >More info -0.24 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
358 rdr6-15 0.58 >More info 0.26 >More info Col-0 Original data GEO bulk
359 Mutant sav3-2 (WL) -0.23 >More info -0.61 >More info Col-0 (WL) Original data GEO bulk
360 sav3-2 light -0.23 >More info -0.61 >More info Col-0 light seedlings Original data GEO bulk
361 hira-root 0.55 >More info 0.28 >More info WT-root root Original data
362 nas4x leaves + Fe -0.67 >More info -0.16 >More info WT leaves + Fe Leaves Original data GEO bulk
363 2 hr Hypoxia IP RNA -0.57 >More info -0.26 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
364 rdr1-1 0.60 >More info 0.23 >More info Col-0 Original data GEO bulk
365 Fenclorim 4hr -0.61 >More info -0.22 >More info Acetone 4hr root Original data GEO bulk
366 2hr continuous KCl and MSX control PeR cell -0.62 >More info -0.21 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
367 rosette leaves fdh -0.56 >More info -0.26 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
368 R. solani AG2-1 -0.51 >More info -0.31 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
369 root hypoxia total -0.55 >More info -0.27 >More info root control total Original data GEO bulk
370 miR393 0h 0.52 >More info 0.30 >More info WT 0h Leaf tissue Original data GEO bulk
371 +1.6 mM Tween 20 1 h. -0.51 >More info -0.31 >More info +distilled water 1 h. Original data GEO bulk
372 tor mutant glucose -0.53 >More info -0.29 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
373 mkk1/mkk2 control rep -0.51 >More info -0.31 >More info Col-0 Time 0 rep Original data GEO bulk
374 6h +Pi 0.62 >More info 0.20 >More info 6h -Pi root Original data GEO bulk
375 Leafminer locally damaged thaliana seedlings -0.58 >More info -0.24 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
376 Laer pretreat GA Flg22 0h -0.58 >More info -0.24 >More info Laer pretreat water control leaf discs Original data GEO bulk
377 atmospheric CO2 high Mg shoot -0.57 >More info -0.25 >More info atmospheric CO2 normal Mg shoot Shoot Original data
378 cat2-long-day 2d 0.58 >More info 0.24 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
379 prors1-2 leaves -0.61 >More info -0.21 >More info Col-0 leaves leaves Original data
380 atr zebularine -0.59 >More info -0.23 >More info WT zebularine shoot apical meristem Original data
381 WT (Col-0) inflorescence drought day 4 -0.58 >More info -0.24 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
382 P35S:rGRF1 0.62 >More info 0.19 >More info Col-0 Original data GEO bulk
383 psad1-1 stn7-1 0.55 >More info 0.26 >More info Col-0 rosette leaves Original data GEO bulk
384 AtGATA2ox -0.53 >More info -0.28 >More info Col seedling Original data GEO bulk
385 P35S:rGRF3 -0.66 >More info -0.15 >More info WS Original data GEO bulk
386 Cocultivation 8 hrs root -0.52 >More info -0.29 >More info Mock cocultivation 8 hrs root Root Original data
387 seedling 3h after Gamma WT -0.60 >More info -0.21 >More info seedling day 1 unirradiated WT 3h Original data
388 Col-0 Root 100 mM ATP 30 min -0.51 >More info -0.29 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
389 root protoplasts 40 mM NaCl -0.60 >More info -0.20 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
390 Col upon hypoxia 6 hrs -0.53 >More info -0.27 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
391 myb21 myb24 stage3 0.53 >More info 0.27 >More info WT stage3 Original data GEO bulk
392 vte2-1 3d vernalization -0.60 >More info -0.20 >More info WT 3d vernalization Original data GEO bulk
393 WT resupplied Pi 4h -0.62 >More info -0.18 >More info WT complete seedlings Original data
394 CMP 24hr -0.57 >More info -0.23 >More info Acetone 24hr root Original data GEO bulk
395 0h hml -0.61 >More info -0.18 >More info 0h wt Original data
396 Col-0 low oxygen -0.51 >More info -0.28 >More info Col-0 control low oxygen root Original data GEO bulk
397 whole roots 140 mM NaCl 1 hour -0.52 >More info -0.27 >More info whole roots standard Original data GEO bulk
398 grf1/grf2/grf3 -0.56 >More info -0.23 >More info WS Original data GEO bulk
399 seedling 1.5h after HZE WT -0.56 >More info -0.23 >More info seedling day 1 unirradiated WT 1.5h Original data
400 Laer Flg22 2h -0.59 >More info -0.20 >More info Laer Control leaf discs Original data GEO bulk
401 Elevated CO2 expanding leaf -0.56 >More info -0.23 >More info Ambient CO2 expanding leaf expanding leaf Original data
402 Salicylic Acid 3 h -0.27 >More info -0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
403 P. infestans 6 h (leaf) -0.63 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
404 seedling 24h after HZE atm-1 -0.64 >More info -0.14 >More info seedling day 2 unirradiated atm-1 24h Original data
405 lug3 flowers -0.59 >More info -0.19 >More info WT-flowers flowers Original data GEO bulk
406 gh3.5-1D 48 hpi -0.62 >More info -0.16 >More info Col-0 uninoculated Original data GEO bulk
407 inhibitor B Treated -0.56 >More info -0.22 >More info Negative Control Original data GEO bulk
408 abi4 vtc2 (I) -0.51 >More info -0.27 >More info Col (I) rosette Original data GEO bulk
409 Col-0 2h NAA -0.51 >More info -0.26 >More info Col-0 6h MOCK Original data GEO bulk
410 Fei-0-30min IAA -0.65 >More info -0.12 >More info Fei-0-0h IAA whole plant Original data GEO bulk
411 Whole root - low pH 12H -0.54 >More info -0.23 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
412 MPK6 ox Shoot Hypoxia -0.56 >More info -0.21 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
413 Chitosan 3h Treatment -0.59 >More info -0.18 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
414 Hydrogen Peroxide 500 uM -0.60 >More info -0.17 >More info Control RB and PER Hydrogen Peroxide Original data
415 NAA 3h -0.52 >More info -0.24 >More info before treatment NAA root Original data GEO bulk
416 Oxidative Stress 3 h (root) 0.55 >More info 0.21 >More info Stress mock 3 h (root) Original data Stress treatments
417 IAA 1 h -0.52 >More info -0.24 >More info Mock 1 h Original data Basic hormone treatment of seedlings
418 C24 UV1 0.59 >More info 0.17 >More info C24 mock UV seedling Original data
419 Imidazolinone EC50 -0.51 >More info -0.24 >More info Carrier (Imidazolinone) Original data GEO bulk
420 roottip hypoxia total -0.54 >More info -0.21 >More info roottip control total Original data GEO bulk
421 Compost -0.50 >More info -0.25 >More info Perlite Compost Original data GEO bulk
422 AAF-OX -0.58 >More info -0.17 >More info Col-0 Rosette leaf Original data GEO bulk
423 seed germinating in countinuous light 24h SL 0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
424 toc1-1-65hr -0.59 >More info -0.15 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
425 Col PSTDC3000 24h -0.61 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
426 OE-HRA1 2HS  -0.51 >More info -0.23 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
427 Nicotinamide-61hr -0.54 >More info -0.20 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
428 mbd6 mutant thaliana 10-day-old seedling -0.54 >More info -0.20 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
429 IRP1-OE-Fe--shoot -0.64 >More info -0.10 >More info COL-0-Fe--shoot shoot Original data
430 Apex mir-3TCP 14DAS 0.56 >More info 0.17 >More info Apex Col 14DAS Original data GEO bulk
431 Mutant cry1 (High Light) 0.53 >More info 0.20 >More info Col-0 (High Light) Original data GEO bulk
432 cat2-hCO2 0.62 >More info 0.11 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
433 WT Root-Pi -0.54 >More info -0.19 >More info WT Root+Pi roots Original data GEO bulk
434 Col-0 wt Hypoxic -0.53 >More info -0.20 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
435 2hr transitory KNO3 PrR cell -0.57 >More info -0.16 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
436 cry1 high light 0.53 >More info 0.20 >More info Col-O high light Original data GEO bulk
437 35S:RPS4 rrs1-11 2h -0.02 >More info 0.75 >More info 35S:RPS4 2h leaves Original data
438 root cells columella root cap -Fe -0.55 >More info -0.17 >More info whole roots standard Original data GEO bulk
439 toc1-1-53hr -0.55 >More info -0.17 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
440 ckh1 CK25 -0.55 >More info -0.17 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
441 Osmotic Stress 24 h (shoot) -0.51 >More info -0.21 >More info Stress mock 24 h (shoot) Original data Stress treatments
442 ckh1 CK0 -0.51 >More info -0.21 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
443 del1-1 mutant 5d uninfected -0.51 >More info -0.21 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
444 npr1-3 MOCK 48h 0.53 >More info 0.19 >More info Col-0 MOCK 48h Original data GEO bulk
445 Mutant arf2-6 0.53 >More info 0.19 >More info Col Original data GEO bulk
446 C24-1h IAA -0.62 >More info -0.10 >More info C24-0h IAA whole plant Original data GEO bulk
447 penta MeJA 1h -0.62 >More info -0.10 >More info Laer MeJA 1h leaf discs Original data GEO bulk
448 FHY3p dark+DEX 0.58 >More info 0.14 >More info FHY3p dark+mock Original data GEO bulk
449 oas-a1.1 shoot 0.59 >More info 0.13 >More info WT-Untreated Shoot Original data GEO bulk
450 AsAKiin11 T3 0.56 >More info 0.15 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
451 gai Control -0.55 >More info -0.16 >More info Laer Control leaf discs Original data GEO bulk
452 dcl1-7 -0.56 >More info -0.15 >More info Ler Original data GEO bulk
453 Laer pretreat GA+JA Flg22 0h -0.51 >More info -0.20 >More info Laer pretreat water control leaf discs Original data GEO bulk
454 aox1a(line) MLD stressed -0.52 >More info -0.19 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
455 FLIGHT TAGESB plate -0.64 >More info -0.07 >More info GROUND CONTROL TAGESB plate Original data
456 WT NAA 1h -0.54 >More info -0.16 >More info WT 0h Leaf tissue Original data GEO bulk
457 HairpinZ 4 h (leaf) -0.67 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
458 WT roots - Fe -0.66 >More info -0.04 >More info WT roots + Fe Roots Original data GEO bulk
459 35S::CYC -0.50 >More info -0.20 >More info thaliana control secondary inflorescence Original data
460 AFB1 0h -0.54 >More info -0.15 >More info Col 0h Leaf Original data GEO bulk
461 35S::IaTCP -0.53 >More info -0.16 >More info thaliana control secondary inflorescence Original data
462 seedling 1.5h after Gamma WT -0.52 >More info -0.17 >More info seedling day 1 unirradiated WT 1.5h Original data
463 atgsnor1-1 0.60 >More info 0.09 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
464 toc1-1-77hr -0.62 >More info -0.07 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
465 NJ15 -0.62 >More info -0.07 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
466 hypoxic 0.51 >More info 0.18 >More info WT aerobic hypoxia Original data GEO bulk
467 Nicotinamide-89hr -0.50 >More info -0.18 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
468 Cd 24h root 0.50 >More info 0.18 >More info WT-Untreated Shoot Original data GEO bulk
469 rGRF3x35S:GIF 0.55 >More info 0.12 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
470 Total RNA 35S:HF-RPL18 -0.65 >More info -0.02 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
471 calcicole ecotype Cal-0 -0.60 >More info -0.07 >More info Col-4 1 mM CaCl2 Original data GEO bulk
472 del1-1 5dpi -0.60 >More info -0.07 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
473 Shoot P recovery -0.67 >More info 0.01 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
474 dor drought -0.53 >More info -0.13 >More info WT drought Original data GEO bulk
475 atgsnor1-3-avrB-6h -0.56 >More info -0.10 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
476 root cells endodermis 140mM NaCl 8 hours -0.58 >More info -0.07 >More info root cells endodermis standard 1 hour root cells endodermis Original data
477 rosettes drought 0.50 >More info 0.13 >More info rosettes watered Original data GEO bulk
478 Fei-0-1h IAA -0.54 >More info -0.08 >More info Fei-0-0h IAA whole plant Original data GEO bulk
479 WT-drought -0.54 >More info -0.07 >More info WT-control leaf Original data
480 frb1 mutant -0.54 >More info -0.07 >More info WT whole seedling Original data GEO bulk
481 Apex BLS>>TCP4 14DAS 0.51 >More info 0.10 >More info Apex Col 14DAS Original data GEO bulk
482 seedling 3h after HZE WT -0.63 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
483 CCA1-ox 6am non-polysomal 0.10 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
484 lug3 leaves -0.57 >More info -0.03 >More info WT-leaves matured rosette leaves Original data GEO bulk
485 light-hs 0.57 >More info 0.03 >More info light-control seedling Original data
486 IAA7mII over-expressor IAA Treated -0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
487 myb50 xylem -0.55 >More info -0.04 >More info wt xylem xylem Original data GEO bulk
488 atr mitomycin C -0.50 >More info -0.09 >More info WT mitomycin C shoot apical meristem Original data
489 anti-sense for AtAOX1a -0.60 >More info 0.01 >More info WT Original data GEO bulk
490 eds16 whole leaf 1dpi 0.08 >More info 0.51 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
491 GRX-overexpression seedlings MV 0.52 >More info 0.05 >More info WT seedlings MV Seedlings Original data GEO bulk
492 rsl4 0.50 >More info 0.07 >More info Col-0 Control root Original data GEO bulk
493 ddm1 F6 inflorescence -0.51 >More info -0.06 >More info wt Col inflorescence unopened flower buds Original data
494 sta1 -0.50 >More info -0.06 >More info WT Original data GEO bulk
495 Mutant lfy-12(flower) -0.51 >More info -0.05 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
496 root cells endodermis 140mM NaCl 20 hours -0.56 >More info -0.00 >More info root cells endodermis standard 1 hour root cells endodermis Original data
497 cdpk6-yfp -0.59 >More info 0.03 >More info Kan seedlings Original data GEO bulk
498 vte2 leaves 120h LT -0.60 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
499 JMJ24-IBM1 double knockout 0.62 >More info -0.07 >More info WT Original data GEO bulk
500 AtMYB30-ox 90-105 min Xanthomonas -0.53 >More info -0.02 >More info WT 90-105 min Xanthomonas Original data GEO bulk
501 L2.5 mutant 0.54 >More info 0.00 >More info Wt Original data GEO bulk
502 Polysomal RNA 35S:HF-RPL18 -0.59 >More info 0.06 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
503 control leaf (cmt 5d) 0.51 >More info 0.02 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
504 Laer GA 1h 0.01 >More info -0.54 >More info Laer Control leaf discs Original data GEO bulk
505 Lip0 UV -0.50 >More info -0.02 >More info Lip0 mock UV seedling Original data
506 gpa1 -ABA LF -0.50 >More info -0.02 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
507 seedlings + TSA -0.52 >More info 0.01 >More info control seedlings 10-day old whole seedling Original data GEO bulk
508 Laer pretreat JA Flg22 0h -0.07 >More info 0.57 >More info Laer pretreat water control leaf discs Original data GEO bulk
509 Apex octa 18DAS 0.52 >More info -0.05 >More info Apex Col 14DAS Original data GEO bulk
510 fis1X2x fis1 mutant cross 0.56 >More info -0.10 >More info 2xX2x cross Original data GEO bulk
511 xyl-grown cell culture- 1h 1mM Fru 0.05 >More info -0.50 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
512 35S:RPS4 rrs1-11 24h 0.51 >More info -0.14 >More info 35S:RPS4 24h leaves Original data
513 Col-0 RNAi-MBS2/mbs1-1 HL 0h -0.53 >More info 0.16 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
514 Laer pretreat GA Flg22 1h -0.34 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
515 WT +Pep2 2h -0.71 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
516 Col BTH -0.33 >More info 0.67 >More info Col rosettes Original data GEO bulk
517 root cells cortex -Fe -0.60 >More info 0.26 >More info whole roots standard Original data GEO bulk
518 Heat shock optimum -0.45 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
519 irradiated leaf (WT 5d) -0.54 >More info 0.36 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
520 siliques AtHb1 control -0.41 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
521 Leafminer damaged seedlings -0.58 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
522 Col0-PsmES4326-24hpi -0.60 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk