4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on ice1 control
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List of experiments correlated with "ice1 control"  Help Download transcriptome of top 30
Score Experiment Correlation from
ice1 control		 Correlation to
ice1 control		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 ice1 control 1.00 >More info 1.00 >More info WT control Original data GEO bulk
2 ice1 6H Cold 0.96 >More info 0.96 >More info WT 6H Cold Original data GEO bulk
3 ice1 3H Cold 0.97 >More info 0.93 >More info WT 3H Cold Original data GEO bulk
4 ice1 24H Cold 0.88 >More info 0.90 >More info WT 24H Cold Original data GEO bulk
5 scrm-D 0.88 >More info 0.84 >More info Col-0 WT whole seedling Original data GEO bulk
6 HopZ1a treated 0.86 >More info 0.78 >More info col Original data GEO bulk
7 HopZ1a treated ulp1c ulp1d 0.84 >More info 0.78 >More info col Original data GEO bulk
8 cop1 Seedling BL 0.80 >More info 0.82 >More info WT Seedling BL Original data GEO bulk
9 gh3.5-1D 48 hpi 0.84 >More info 0.76 >More info Col-0 uninoculated Original data GEO bulk
10 del1-1 mutant 5d uninfected 0.80 >More info 0.77 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
11 Elevated CO2 AMPLE N DAY 0.76 >More info 0.81 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
12 B.cinerea 18 h infection 0.74 >More info 0.83 >More info Mock 18 h Original data Botrytis cinerea infection
13 Botrytis cinerea 18h 0.74 >More info 0.83 >More info control 18h Original data GEO bulk
14 IMI 4mM 0.81 >More info 0.75 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
15 atmyc2 cop1 Seedling BL 0.73 >More info 0.83 >More info WT Seedling BL Original data GEO bulk
16 smg7b-1 0.80 >More info 0.75 >More info WT whole plant Original data GEO bulk
17 ceh1 mutant 0.76 >More info 0.79 >More info Parent line Original data
18 Sulfometuron EC50 0.78 >More info 0.77 >More info Carrier Original data GEO bulk
19 AvrRpt2 Col-0 6hpi 0.84 >More info 0.70 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
20 ataf1-1 mutant Col-0 Bgh inoculated 0.80 >More info 0.73 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
21 35S:RPS4 eds1-2 24h -0.81 >More info -0.71 >More info 35S:RPS4 24h leaves Original data
22 Col-0-avrB-6h 0.77 >More info 0.75 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
23 WT Col-0 Bgh inoculated 0.79 >More info 0.73 >More info WT Col-0 Un-inoculated Original data GEO bulk
24 Botrytis cinerea 48h 0.73 >More info 0.78 >More info control 48h Original data GEO bulk
25 edr1 18 h powdery mildew 0.76 >More info 0.75 >More info Col-0 18 h powdery mildew Original data GEO bulk
26 sta1 0.74 >More info 0.76 >More info WT Original data GEO bulk
27 Shoot -Cs 0.67 >More info 0.83 >More info Control-shoot Original data GEO bulk
28 Pst-DC3000(avrRpm1)-4hpi 0.78 >More info 0.72 >More info Pst-DC3000-4hpi Original data GEO bulk
29 Pto inoculated 0.81 >More info 0.69 >More info col Original data GEO bulk
30 sni1 0.71 >More info 0.79 >More info WT Original data GEO bulk
31 Mature callus 0.80 >More info 0.70 >More info Young callus hypocotyls Original data GEO bulk
32 scrm-D:mute 0.81 >More info 0.68 >More info Col-0 WT whole seedling Original data GEO bulk
33 csn5 (csn5a-2 csn5b) light 0.77 >More info 0.72 >More info WT light Original data GEO bulk
34 SLWF infested 0.72 >More info 0.77 >More info SLWF uninfested rosette tissue Original data GEO bulk
35 CLO 4mM 0.71 >More info 0.77 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
36 hrpA 7h 0.77 >More info 0.71 >More info Mock 7h hrpA Original data GEO bulk
37 pnp1-1 1wk +P 0.78 >More info 0.69 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
38 Mutant gh3.5-1D (AvrRpt2) 0.75 >More info 0.72 >More info Col-0 (AvrRpt2) Original data GEO bulk
39 WT-SA 0.75 >More info 0.72 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
40 ASL9-ox -0.76 >More info -0.71 >More info WT aerial parts of seedlings Original data GEO bulk
41 flu 0.77 >More info 0.69 >More info WT Col Original data GEO bulk
42 Leafminer locally damaged thaliana seedlings 0.83 >More info 0.63 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
43 CMV-WT 0.73 >More info 0.73 >More info Mock-At Aerial tissues Original data GEO bulk
44 hrcC 0.76 >More info 0.70 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
45 RPL18 TuMV inoculated total RNA 0.73 >More info 0.73 >More info mock inoculated total RNA PO Original data GEO bulk
46 Col ozone 2d 0.75 >More info 0.71 >More info Col clean-air 2d ozone Original data GEO bulk
47 35S:RPS4 eds1-2 8h -0.78 >More info -0.67 >More info 35S:RPS4 8h leaves Original data
48 AgNO3 3 h 0.75 >More info 0.70 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
49 PAHs stress 0.74 >More info 0.71 >More info exp control phenanthrene whole plants Original data GEO bulk
50 flu over-tAPX 0.73 >More info 0.72 >More info WT Col Original data GEO bulk
51 Elevated CO2 AMPLE N NIGHT 0.67 >More info 0.77 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
52 Col-0 9 hpi A. brassicicola 0.70 >More info 0.74 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
53 lht1 PstDC3000 48h 0.79 >More info 0.65 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
54 Col whole leaf 5dpi 0.71 >More info 0.73 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
55 Shoot -K 0.78 >More info 0.66 >More info Control-shoot Original data GEO bulk
56 K starvation (shoot) 0.78 >More info 0.66 >More info Ws (shoot) Original data GEO bulk
57 RPL18 TuMV inoculated polysomal RNA 0.74 >More info 0.69 >More info mock inoculated polysomal RNA PO Original data GEO bulk
58 col-5 hrpA 12h 0.70 >More info 0.73 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
59 pvip1 pvip2 0.71 >More info 0.72 >More info Col-0 whole rosettes Original data GEO bulk
60 Imidazolinone EC50 0.65 >More info 0.77 >More info Carrier (Imidazolinone) Original data GEO bulk
61 Col whole leaf 7dpi 0.71 >More info 0.71 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
62 Cor 10h 0.70 >More info 0.72 >More info Mock 10h Cor Original data GEO bulk
63 Chitosan 3h Treatment 0.72 >More info 0.70 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
64 Wounding Stress3 h (shoot) 0.72 >More info 0.69 >More info Stress mock 3 h (shoot) Original data Stress treatments
65 rosette Dark Wounded 0.74 >More info 0.66 >More info rosette Dark Control Original data GEO bulk
66 csn3-1 light 0.73 >More info 0.67 >More info WT light Original data GEO bulk
67 WT 2-4h Xanthomonas 0.67 >More info 0.73 >More info WT T0 Original data GEO bulk
68 anac017-2 AntimycinA 3h -0.69 >More info -0.71 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
69 LTN008-2 aza-dc 0.74 >More info 0.66 >More info LTN012-2 Mock Original data
70 DC3000 24h 0.74 >More info 0.66 >More info Mock 24h DC3000 Original data GEO bulk
71 Leafminer damaged seedlings 0.83 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
72 GST NPP1 4 h (leaf) 0.71 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
73 Glyphosate EC50 0.59 >More info 0.80 >More info Carrier (Glyphosate) Original data GEO bulk
74 Flagellin 4 h (leaf) 0.72 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
75 CMP 24hr 0.72 >More info 0.67 >More info Acetone 24hr root Original data GEO bulk
76 Col-0 under 4 days salt 0.70 >More info 0.69 >More info Col-0 under control 4 days salt treatment rosette Original data
77 nia1nia2 0.69 >More info 0.70 >More info Col-0 whole seedlings Original data GEO bulk
78 anac017-1 H2O2 3h -0.72 >More info -0.66 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
79 bak1-3 +Pep2 10h 0.68 >More info 0.70 >More info WT +Pep2 10h Pep2 Original data GEO bulk
80 cpr5npr1 0.70 >More info 0.68 >More info WT(COL) Original data GEO bulk
81 efr-1 +elf18 10h -0.71 >More info -0.67 >More info WT +elf18 10h elf18 Original data GEO bulk
82 Col0-PsmES4326-24hpi 0.77 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
83 ein2-1 9 hpi A. brassicicola 0.72 >More info 0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
84 pepr1-1 Pepr2-3 +Pep2 2h -0.69 >More info -0.68 >More info WT +Pep2 2h Pep2 Original data GEO bulk
85 WT powdery mildew 0.66 >More info 0.71 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
86 Lipopolysaccaride4 h (leaf) 0.67 >More info 0.70 >More info Mock 4 h (leaf) Original data Elicitor treatments
87 msh1 albino 0.68 >More info 0.68 >More info WT aerial part Original data GEO bulk
88 DFPM 0.68 >More info 0.68 >More info control Original data GEO bulk
89 Primisulfuron EC50 0.61 >More info 0.75 >More info Carrier (primisulfuron) Original data GEO bulk
90 pmr5 pmr6 0.66 >More info 0.70 >More info Col-0 Original data GEO bulk
91 Col-0 48 hpi 0.72 >More info 0.64 >More info Col-0 uninoculated Original data GEO bulk
92 UV Stress 24 h (shoot) 0.62 >More info 0.74 >More info Stress mock 24 h (shoot) Original data Stress treatments
93 edr1 36 h powdery mildew 0.67 >More info 0.69 >More info Col-0 36 h powdery mildew Original data GEO bulk
94 Mutant cry1 (High Light) -0.77 >More info -0.58 >More info Col-0 (High Light) Original data GEO bulk
95 cpr5 0.64 >More info 0.71 >More info WT(COL) Original data GEO bulk
96 cpr5 0.70 >More info 0.65 >More info WT seedling Original data GEO bulk
97 cry1 high light -0.77 >More info -0.58 >More info Col-O high light Original data GEO bulk
98 Elevated CO2 fully expanded leaf 0.67 >More info 0.67 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
99 shoots bhlh100/101 0uM Fe 0.68 >More info 0.66 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
100 lht1 untreated 0.67 >More info 0.67 >More info WT untreated untreated leaf Original data GEO bulk
101 35S::ERF104 Flg22 4h 0.68 >More info 0.66 >More info 35S::ERF104 H2O 4h Original data GEO bulk
102 GST 4 h (leaf) 0.55 >More info 0.79 >More info Mock 4 h (leaf) Original data Elicitor treatments
103 cpr5scv1 0.63 >More info 0.71 >More info WT(COL) Original data GEO bulk
104 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.77 >More info 0.56 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
105 pnp1-1 3h +P 0.66 >More info 0.67 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
106 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.79 >More info 0.54 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
107 cpr5npr1svi1 0.57 >More info 0.76 >More info WT(COL) Original data GEO bulk
108 upf3 0.76 >More info 0.57 >More info WT whole plant Original data GEO bulk
109 coi1-16 ein2 sid2 ctrl -0.77 >More info -0.56 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
110 toc1-1-49hr 0.67 >More info 0.65 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
111 CMP 4hr 0.70 >More info 0.62 >More info Acetone 4hr root Original data GEO bulk
112 pmr5 0.60 >More info 0.72 >More info Col-0 Original data GEO bulk
113 ARR21C-ox 0.72 >More info 0.60 >More info Col-0 Original data ARR21C overexpression
114 wrky33 Bc inoculation 14h 0.77 >More info 0.54 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
115 E.coli TUV86 2 fliC 7h 0.64 >More info 0.67 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
116 S58-2 0.65 >More info 0.66 >More info wt Original data GEO bulk
117 anac017-2 H2O2 3h -0.74 >More info -0.57 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
118 col-5 DC3000 12h 0.60 >More info 0.71 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
119 sid2 -0.68 >More info -0.62 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
120 Col BTH 0.63 >More info 0.67 >More info Col rosettes Original data GEO bulk
121 leaf13 0.68 >More info 0.62 >More info unwounded leaves none Original data GEO bulk
122 Triazolopyrimidine EC50 0.56 >More info 0.74 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
123 toc1-1-57hr 0.66 >More info 0.64 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
124 toc1-1-77hr 0.72 >More info 0.58 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
125 eds16 whole leaf 5dpi -0.58 >More info -0.72 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
126 IRP1-OE-Fe--shoot 0.69 >More info 0.61 >More info COL-0-Fe--shoot shoot Original data
127 Mutant siz1-3 0.66 >More info 0.63 >More info Col-0 Original data GEO bulk
128 Starch sheath 5 days MS incubation 0.56 >More info 0.73 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
129 cop1 Seedling BL+ABA 0.65 >More info 0.64 >More info WT Seedling BL+ABA Original data GEO bulk
130 siz1-3 control 0.66 >More info 0.63 >More info Col-0 control Original data GEO bulk
131 hrpA fliC 7h 0.79 >More info 0.50 >More info Mock 7h hrpA fliC Original data GEO bulk
132 35:SUB1A 0.75 >More info 0.54 >More info WT whole seedling Original data GEO bulk
133 UV 0.71 >More info 0.58 >More info WT aerial region Original data GEO bulk
134 Cor hrpS 10h 0.72 >More info 0.57 >More info Mock 10h Cor hrpS Original data GEO bulk
135 mpk6-ko Flg22 4h 0.67 >More info 0.62 >More info mpk6-ko H2O 4h Original data GEO bulk
136 mkk1/mkk2 control rep 0.66 >More info 0.63 >More info Col-0 Time 0 rep Original data GEO bulk
137 Osmotic Stress 24 h (shoot) 0.63 >More info 0.65 >More info Stress mock 24 h (shoot) Original data Stress treatments
138 WT Bc inoculation 14h 0.73 >More info 0.55 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
139 Col-0 ozone 0.77 >More info 0.51 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
140 OH1 0.66 >More info 0.62 >More info Col-0 leaves Original data GEO bulk
141 8h-DC3000 avrRpm1 0.66 >More info 0.62 >More info 8h-DC3000 leaves Original data GEO bulk
142 irradiated leaf (cmt 1d) 0.63 >More info 0.64 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
143 wavy 0.57 >More info 0.70 >More info WT Original data GEO bulk
144 E.coli 0157 H7 7h 0.64 >More info 0.63 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
145 WT-NOCO2 INFECTED 0.63 >More info 0.64 >More info WT-MOCK Original data GEO bulk
146 CMV-A2b mutant 0.61 >More info 0.66 >More info Mock-At Aerial tissues Original data GEO bulk
147 erf104-ko Flg22 4h 0.63 >More info 0.64 >More info erf104-ko H2O 4h Original data GEO bulk
148 Te ozone 0.74 >More info 0.53 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
149 TNT-seedlings 0.55 >More info 0.72 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
150 Laer treat paclobutrazol (PAC) 0.64 >More info 0.63 >More info Laer Control leaf discs Original data GEO bulk
151 total mRNA eif3k 0.67 >More info 0.59 >More info total mRNA WT aerial part Original data GEO bulk
152 Mutant siz1-3 (Drought) 0.68 >More info 0.58 >More info Col-0 (Drought) Original data GEO bulk
153 siz1-3 drought 0.68 >More info 0.58 >More info Col-0 drought Original data GEO bulk
154 seedlings-week-old RECA1-overexpressing
transgenic		 0.58 >More info 0.68 >More info seedlings-week-old Col-0 seedlings Original data
155 npr1-1 SA -0.65 >More info -0.60 >More info Col-0 SA complete seedling Original data
156 WT in -N 0.61 >More info 0.64 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
157 sid2-1 cold -0.56 >More info -0.69 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
158 penta Alternaria 3dpi 0.69 >More info 0.56 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
159 Col-O high light 0.68 >More info 0.56 >More info Col-O bule light Original data GEO bulk
160 CT101 ozone 0.73 >More info 0.51 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
161 irradiated leaf (WT 1d) 0.60 >More info 0.64 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
162 Leaf GLU1-KO 0.61 >More info 0.63 >More info Leaf Col(0) rosette leaves Original data GEO bulk
163 35S::PI ap3-3 35S::AP-GR +DEX 0.51 >More info 0.73 >More info 0hr DEX Original data GEO bulk
164 ulp1c ulp1d +Pto 0.64 >More info 0.60 >More info ulp1c ulp1d mock Original data GEO bulk
165 current injection 0.61 >More info 0.63 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
166 mkk1/mkk2 24h BTH rep 0.61 >More info 0.63 >More info Col-0 24h BTH rep Original data GEO bulk
167 ARR22-ox (t-zeatin 3 h) 0.69 >More info 0.55 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
168 Mutant iaa17-6 0.63 >More info 0.60 >More info Col Original data GEO bulk
169 PBZ 0.63 >More info 0.60 >More info none PBZ Rosette Original data GEO bulk
170 WT Seedling BL+ABA 0.66 >More info 0.57 >More info WT Seedling BL Original data GEO bulk
171 smg5-2 0.73 >More info 0.50 >More info WT whole plant Original data GEO bulk
172 WT 3h -P 0.50 >More info 0.73 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
173 Fenclorim 4hr 0.56 >More info 0.67 >More info Acetone 4hr root Original data GEO bulk
174 Col-0 C2H4 24h 0.60 >More info 0.63 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
175 GO5; 0h switch to ambient CO2 concentrations; -0.68 >More info -0.54 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
176 WT +elf18 10h 0.66 >More info 0.56 >More info WT untreated elf18 Original data GEO bulk
177 Mutant axr3-1 0.55 >More info 0.67 >More info Col Original data GEO bulk
178 Mutant coi1(leaf) -0.56 >More info -0.66 >More info Col-0 (leaf) Original data GEO bulk
179 Phaseolicola 2 h (leaf) 0.60 >More info 0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
180 RRE2 Chitin 0.63 >More info 0.59 >More info Chitin Original data GEO bulk
181 upf1 0.72 >More info 0.50 >More info WT whole plant Original data GEO bulk
182 Col leaves 48h LT 0.57 >More info 0.65 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
183 rosette Light Wounded 0.61 >More info 0.61 >More info rosette Light Control Original data GEO bulk
184 coi1-16 ein2 sid2 ozone 0.77 >More info 0.45 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
185 bZIP1ko mutant N+Light- 0.53 >More info 0.69 >More info WT-sib N+Light- whole plant Original data GEO bulk
186 sicy-192 gun1-101 cotyledons 0.58 >More info 0.64 >More info WT cotyledons cotyledons Original data
187 aba3-1 0.58 >More info 0.63 >More info wt Original data GEO bulk
188 seedlings +5AC 0.56 >More info 0.65 >More info control seedlings 10-day old whole seedling Original data GEO bulk
189 albino Ds13-2198-1 -0.59 >More info -0.62 >More info control Original data GEO bulk
190 toc1-1-81hr 0.56 >More info 0.65 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
191 SA 4mM 0.76 >More info 0.45 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
192 aerial organ callus inducing medium 96 h 0.53 >More info 0.68 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
193 gun1gun5 far-red pretreated -0.57 >More info -0.63 >More info WT far-red pretreated Original data GEO bulk
194 S15-118 0.57 >More info 0.63 >More info wt Original data GEO bulk
195 ABA DFPM 0.61 >More info 0.59 >More info control Original data GEO bulk
196 rao2 H2O2 3h -0.63 >More info -0.56 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
197 aox1a(line) MLD stressed 0.55 >More info 0.64 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
198 arf2 brz -0.57 >More info -0.62 >More info arf2 mock Original data GEO bulk
199 Col-Luc WT 3h antimycin A 0.60 >More info 0.59 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
200 Col-0 INA 48h 0.51 >More info 0.67 >More info Col-0 MOCK 48h Original data GEO bulk
201 aerial organ callus inducing medium 48 h 0.53 >More info 0.65 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
202 Mutant iaa5_6_19 0.55 >More info 0.63 >More info Col Original data GEO bulk
203 nia1nia2noa1-2 0.60 >More info 0.58 >More info Col-0 whole seedlings Original data GEO bulk
204 BLM+INA 0.49 >More info 0.69 >More info CK BLM and INA seedling Original data
205 toc1-1-65hr 0.67 >More info 0.50 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
206 mil4 BTH 0.57 >More info 0.60 >More info Col BTH rosettes Original data GEO bulk
207 DC3000 2 h (leaf) 0.57 >More info 0.60 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
208 Cor 24h 0.60 >More info 0.57 >More info Mock 24h Cor Original data GEO bulk
209 clf-28 swn-7 0.58 >More info 0.59 >More info Col whole plant Original data GEO bulk
210 JMJ24 knockout 0.58 >More info 0.59 >More info WT Original data GEO bulk
211 FOX line K19624 0.56 >More info 0.61 >More info empty vector control (T3) FOX lines Original data GEO bulk
212 leaf blade in D 0.57 >More info 0.60 >More info leaf blade in WL leaf blades Original data GEO bulk
213 Salt Stress 24 h (shoot) 0.57 >More info 0.58 >More info Stress mock 24 h (shoot) Original data Stress treatments
214 WT 1wk -P 0.62 >More info 0.53 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
215 treated group 0.68 >More info 0.46 >More info Control group Original data
216 Laer Alternaria 3dpi -0.51 >More info -0.63 >More info Laer Control leaf discs Original data GEO bulk
217 WT+H2O2 0.50 >More info 0.64 >More info WT H2O2 Original data GEO bulk
218 Myzus persicae saliva 0.50 >More info 0.64 >More info Control Original data GEO bulk
219 aphid saliva treated 0.50 >More info 0.64 >More info control aphid saliva treated leaves Original data GEO bulk
220 D2O 0.58 >More info 0.56 >More info H2O seedling Original data GEO bulk
221 Col-0 drought 0.64 >More info 0.50 >More info Col-0 control Original data GEO bulk
222 toc1-1-53hr 0.59 >More info 0.55 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
223 Seedling KUA1-IOX est 0.49 >More info 0.65 >More info Seedling KUA1-IOX mock Original data
224 Nicotinamide-81hr 0.52 >More info 0.61 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
225 pepr1-1 Pepr2-3 +Pep2 10h -0.51 >More info -0.62 >More info WT +Pep2 10h Pep2 Original data GEO bulk
226 dor drought 0.61 >More info 0.52 >More info WT drought Original data GEO bulk
227 vte2-1 3d vernalization 0.50 >More info 0.63 >More info WT 3d vernalization Original data GEO bulk
228 bio4-1 mutant leaves 0.54 >More info 0.59 >More info WT leaves leaves Original data GEO bulk
229 frb1 mutant 0.58 >More info 0.55 >More info WT whole seedling Original data GEO bulk
230 rcf1-1 cold 12h 0.54 >More info 0.59 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
231 rcf1-1 cold 0h 0.53 >More info 0.60 >More info WT cold 0h Control seedlings Original data GEO bulk
232 ced1 -0.61 >More info -0.52 >More info WT PEG 6hr seedlings Original data GEO bulk
233 Col-0 DCA 48h 0.49 >More info 0.64 >More info Col-0 MOCK 48h Original data GEO bulk
234 +1.6 mM Tween 20 1 h. 0.35 >More info 0.78 >More info +distilled water 1 h. Original data GEO bulk
235 DC3000 7h 0.48 >More info 0.65 >More info Mock 7h DC3000 Original data GEO bulk
236 eif3h 0.61 >More info 0.51 >More info WT Original data GEO bulk
237 cat2-hCO2 -0.61 >More info -0.51 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
238 miR393 flg22 2h 0.51 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
239 downy mildew cotyledons late stage 0.52 >More info 0.60 >More info mock inoculated Cotyledons Original data GEO bulk
240 4d red light grown hmr-5 seedlings 0.62 >More info 0.50 >More info 4d red light grown WT(Col-0) seedlings Original data
241 WT AntimycinA 3h 0.58 >More info 0.54 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
242 abi4 vtc2 (I) 0.57 >More info 0.55 >More info Col (I) rosette Original data GEO bulk
243 csn4-1 dark 0.64 >More info 0.48 >More info WT light Original data GEO bulk
244 MYB46-GR DEX 0.44 >More info 0.68 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
245 myb3 myb3r4d 0.42 >More info 0.70 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
246 seedlings protease IV 0.56 >More info 0.55 >More info seedlings nontreated control whole seedling Original data
247 A. thaliana-A. lyrata hybrid -0.56 >More info -0.55 >More info A. thaliana mature leaves before flowering Original data GEO bulk
248 rsa3-1 Na 24h 0.50 >More info 0.61 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
249 col-5 hrpA 2h 0.61 >More info 0.50 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
250 gpa1-4/agb1-2 ozone 2d -0.61 >More info -0.50 >More info Col ozone 2d ozone Original data GEO bulk
251 safener treated 0.53 >More info 0.58 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
252 WT flg22 2h 0.61 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
253 rosette leaves lcr 0.51 >More info 0.60 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
254 atgsnor1-1 -0.61 >More info -0.49 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
255 Col-0 Flg22 4h 0.56 >More info 0.54 >More info Col-0 H2O 4h Original data GEO bulk
256 C24 ozone 0.67 >More info 0.43 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
257 cs26 long day 0.63 >More info 0.47 >More info Leaves-WT-LD leaf Original data GEO bulk
258 Col whole leaf amplified 5 dpi 0.50 >More info 0.60 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
259 pho1 0.65 >More info 0.44 >More info Col2WT Original data GEO bulk
260 sfr3 cold 0.55 >More info 0.54 >More info WT cold All aerial tissue Original data GEO bulk
261 WT 90-105 min Xanthomonas 0.56 >More info 0.53 >More info WT T0 Original data GEO bulk
262 Nicotinamide-53hr 0.44 >More info 0.65 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
263 rosette leaves fdh 0.50 >More info 0.59 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
264 35S-MIF1 dark grown 0.61 >More info 0.48 >More info Dark-grown WT control Original data GEO bulk
265 Methyl Jasmonate 1 h 0.58 >More info 0.51 >More info Mock 1 h Original data Basic hormone treatment of seedlings
266 Cycloheximide 3 h 0.48 >More info 0.61 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
267 bio4-1 mutant watered00µM biotin leaves -0.38 >More info -0.71 >More info bio4-1 mutant leaves leaves Original data GEO bulk
268 gh3.5D uninoculated -0.49 >More info -0.60 >More info Col-0 48 hpi Original data GEO bulk
269 Atss3 Light4 -0.55 >More info -0.53 >More info Atss3 Dark0.5 Original data GEO bulk
270 cat2-2; 8h switch to ambient CO2 concentrations; 0.63 >More info 0.45 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
271 rpoTmp(line) MLD stressed 0.52 >More info 0.56 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
272 vtc2 (I) 0.52 >More info 0.56 >More info Col (I) rosette Original data GEO bulk
273 SPT4-R3 seedlings0 DAS 0.53 >More info 0.55 >More info Col-0 seedlings0 DAS seedlings Original data
274 FAMA induced 48h 0.61 >More info 0.46 >More info control 48h Whole seedling Original data GEO bulk
275 WT 3H Cold 0.51 >More info 0.56 >More info WT control Original data GEO bulk
276 rpl24 total 0.63 >More info 0.44 >More info WT total seedling shoot/aerial seedling Original data
277 E2Fa-Dpa 0.65 >More info 0.42 >More info WT Original data GEO bulk
278 ein5-1 ski2-3 0.55 >More info 0.52 >More info Col-0 aerial tissue Original data
279 HSP90 Reduced RNAi-C1 0.53 >More info 0.54 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
280 sdg2 0.52 >More info 0.55 >More info wt seedling Original data GEO bulk
281 WT resupplied Pi 4h 0.56 >More info 0.51 >More info WT complete seedlings Original data
282 Mutant sav3-2 (WL) 0.41 >More info 0.66 >More info Col-0 (WL) Original data GEO bulk
283 long 17-degree- 0.28 >More info 0.79 >More info control long Original data GEO bulk
284 R. solani AG2-1 0.39 >More info 0.68 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
285 ABA control 0.41 >More info 0.66 >More info No ABA control Original data GEO bulk
286 sav3-2 light 0.41 >More info 0.66 >More info Col-0 light seedlings Original data GEO bulk
287 WT cold 0.50 >More info 0.57 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
288 RRE1 Chitin 0.63 >More info 0.43 >More info Chitin Original data GEO bulk
289 20d after anthesis 0.55 >More info 0.51 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
290 WT 24H Cold 0.55 >More info 0.51 >More info WT control Original data GEO bulk
291 9 hr Hypoxia 1 hr recovery IP RNA 0.53 >More info 0.53 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
292 pmr4-1 control 0.50 >More info 0.56 >More info WT control uninoculated Original data GEO bulk
293 long 14-degree- 0.42 >More info 0.64 >More info control long Original data GEO bulk
294 aox1a:rpoTmp untreated 0.49 >More info 0.57 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
295 apk1 apk2 0.59 >More info 0.46 >More info Col0-control whole rosette Original data GEO bulk
296 Dark 3day ivd 0.59 >More info 0.46 >More info 0h ivd Original data
297 col-5 DC3000-avrRpm 4h 0.61 >More info 0.44 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
298 WT chitooctaose 0.53 >More info 0.52 >More info WT water Original data GEO bulk
299 Selenate (root) 0.43 >More info 0.62 >More info Ws (root) Original data GEO bulk
300 A6 mutant 0.45 >More info 0.60 >More info WT rosette leaves Rosette leaves Original data GEO bulk
301 rcf1-1 cold 24h 0.42 >More info 0.63 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
302 Root Selenate 0.43 >More info 0.62 >More info Root control 40 micromolar selenate Root Original data GEO bulk
303 overexpresser LBD38 in -N -0.57 >More info -0.48 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
304 edr1 0 h powdery mildew 0.53 >More info 0.51 >More info Col-0 0 h powdery mildew Original data GEO bulk
305 abh1 -ABA 0.63 >More info 0.41 >More info Col-0 -ABA Original data GEO bulk
306 auxin and brassinazole seedlings 0.64 >More info 0.40 >More info auxin seedlings Original data GEO bulk
307 Col-0 SA 0.54 >More info 0.50 >More info Col-0 Original data GEO bulk
308 eif3h polysome 0.63 >More info 0.41 >More info WT polysome Original data GEO bulk
309 P.syringae AvrRpt2 4 h (leaf) 0.56 >More info 0.48 >More info Mock 4 h (leaf) Original data Elicitor treatments
310 apum23 0.45 >More info 0.59 >More info WT (Col-3) aerial parts Original data GEO bulk
311 Heat shock optimum 0.39 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
312 Fenclorim 24hr 0.45 >More info 0.59 >More info Acetone 24hr root Original data GEO bulk
313 WT +elf18 2h 0.49 >More info 0.55 >More info WT untreated elf18 Original data GEO bulk
314 OE WRKY63.3 high light 0.46 >More info 0.58 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
315 Ws-2 high light 0.44 >More info 0.60 >More info Ws-2 low light Original data GEO bulk
316 GO5; 8h switch to ambient CO2 concentrations; 0.41 >More info 0.63 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
317 pnp1-1 3h -P 0.51 >More info 0.52 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
318 sid2-2 9 hpi A. brassicicola 0.60 >More info 0.43 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
319 SA 0.42 >More info 0.61 >More info WT mock Whole seedling Original data GEO bulk
320 R. solani AG8 0.37 >More info 0.66 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
321 spx1 spx2 complete 0.60 >More info 0.42 >More info WT complete seedlings Original data
322 pad4-PsmES4326-24hpi -0.53 >More info -0.49 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
323 oas-a1.1 Cd 24h 0.56 >More info 0.46 >More info Cd 24h root Shoot Original data GEO bulk
324 Phytoprostane A1 4 h 0.48 >More info 0.54 >More info Col-0 Original data GEO bulk
325 Col ozone 3h 0.42 >More info 0.60 >More info Col clean-air 3h ozone Original data GEO bulk
326 eif3h non-polysome 0.67 >More info 0.34 >More info WT non-polysome Original data GEO bulk
327 HARAP hypoxic 0.58 >More info 0.43 >More info hypoxic hypoxia Original data GEO bulk
328 rpl24 polysome 0.59 >More info 0.42 >More info WT polysome seedling shoot/aerial seedling Original data
329 Cold Stress 24 h (shoot) 0.54 >More info 0.47 >More info Stress mock 24 h (shoot) Original data Stress treatments
330 WT +Pep2 2h 0.66 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
331 low water potential 0.56 >More info 0.45 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
332 Col-0 norflurazon 0.42 >More info 0.59 >More info Col-0 control Original data GEO bulk
333 Col-0 low oxygen 0.47 >More info 0.54 >More info Col-0 Original data GEO bulk
334 Laer pretreat GA Flg22 1h 0.30 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
335 petiole in D 0.48 >More info 0.53 >More info petiole in WL petioles Original data GEO bulk
336 RRE2 0.48 >More info 0.53 >More info Col C Original data GEO bulk
337 Stem tissue 5 days NAA 0.33 >More info 0.68 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
338 vtc1 (II) 0.46 >More info 0.55 >More info Col (II) rosette Original data GEO bulk
339 9 hr Hypoxia 1 hr recovery Total RNA 0.43 >More info 0.58 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
340 Differentiation 12h 0.37 >More info 0.64 >More info Differentiation 0h leaves Original data
341 Laer Flg22 2h 0.57 >More info 0.43 >More info Laer Control leaf discs Original data GEO bulk
342 toc1-1-61hr 0.64 >More info 0.36 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
343 ppi2 0.45 >More info 0.55 >More info WT whole plant Original data GEO bulk
344 atmospheric CO2 high Mg shoot 0.63 >More info 0.36 >More info atmospheric CO2 normal Mg shoot Shoot Original data
345 WT +Pep2 10h 0.50 >More info 0.49 >More info WT untreated Pep2 Original data GEO bulk
346 atmospheric CO2 low Mg shoot 0.57 >More info 0.42 >More info atmospheric CO2 normal Mg shoot Shoot Original data
347 Norflurazon 0.35 >More info 0.64 >More info Col-0 Original data GEO bulk
348 TA induced 0.44 >More info 0.55 >More info Methanol TA Suspension cells Original data GEO bulk
349 Nicotinamide-57hr 0.44 >More info 0.55 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
350 aerial organ callus inducing medium 24h 0.40 >More info 0.59 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
351 Norflurazon 0.35 >More info 0.64 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
352 Rsch 8h 0.46 >More info 0.53 >More info Rsch CA Leaves Original data
353 Laer Flg22 1h 0.58 >More info 0.40 >More info Laer Control leaf discs Original data GEO bulk
354 mbd4 mutant thaliana 10-day-old seedling 0.51 >More info 0.47 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
355 GR-REV 30min 0.54 >More info 0.44 >More info Col 30min Original data GEO bulk
356 pnp1-1 1wk -P 0.64 >More info 0.34 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
357 rosettes WT drought 0.62 >More info 0.36 >More info rosettes WT watered Original data GEO bulk
358 plant (tga2-5-6) 4h phytoprostane A1 0.45 >More info 0.53 >More info plant (tga2-5-6) 4h control Original data GEO bulk
359 JA 0.36 >More info 0.62 >More info Col-0 mock Whole seedling Original data GEO bulk
360 CAX1/CAX3 mutant 0.43 >More info 0.55 >More info Col whole plant Original data GEO bulk
361 chito-tetramer 0.48 >More info 0.50 >More info Col Mock Original data GEO bulk
362 des1 water 0.48 >More info 0.50 >More info WT water water leaf Original data GEO bulk
363 6h +Pi -0.34 >More info -0.63 >More info 6h -Pi root Original data GEO bulk
364 cdpk6-yfp 0.35 >More info 0.62 >More info Kan seedlings Original data GEO bulk
365 WT 30μM arsenate 8 hours. 0.47 >More info 0.50 >More info WT control (not supplemented). Original data
366 gun1-9 norflurazon 0.51 >More info 0.45 >More info gun1-9 control Original data GEO bulk
367 Dex-rga(delta17) 4h GA4+DEX -0.58 >More info -0.38 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
368 short 12-degree- 0.31 >More info 0.65 >More info control short Original data GEO bulk
369 Ws leaf 100mM NaCl 0.44 >More info 0.52 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
370 Constans-mutant 0.44 >More info 0.52 >More info Col control above-ground whole plant Original data GEO bulk
371 siliques AtHb1 control 0.44 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
372 Ws 100mM NaCl 0.44 >More info 0.52 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
373 S14-150 0.38 >More info 0.58 >More info wt Original data GEO bulk
374 8hr-pH4.5 0.40 >More info 0.55 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
375 AtMYB30-ox 2-4h Xanthomonas 0.52 >More info 0.43 >More info WT 2-4h Xanthomonas Original data GEO bulk
376 csn4-1 mutant 0.54 >More info 0.41 >More info WT dark Original data GEO bulk
377 Col whole leaf 5 dpi 0.33 >More info 0.62 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
378 hst5 0.41 >More info 0.54 >More info Col-0 Original data GEO bulk
379 amiR-tor induced 3d 0.35 >More info 0.60 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
380 tt4 0.42 >More info 0.53 >More info Col-0 aerial part Original data
381 Laer Flg22+GA 1h 0.54 >More info 0.40 >More info Laer Control leaf discs Original data GEO bulk
382 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.39 >More info 0.55 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
383 Laer Flg22+GA 2h 0.57 >More info 0.37 >More info Laer Control leaf discs Original data GEO bulk
384 WT no Pi 0.51 >More info 0.43 >More info WT complete seedlings Original data
385 camta3-2 0.37 >More info 0.57 >More info WT Original data GEO bulk
386 Nicotinamide-85hr 0.43 >More info 0.51 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
387 ckh1 CK200 0.44 >More info 0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
388 Elevated CO2 expanding leaf 0.37 >More info 0.57 >More info Ambient CO2 expanding leaf expanding leaf Original data
389 ERF96OE 0.41 >More info 0.53 >More info WT leaf Original data
390 tor mutant glucose 0.55 >More info 0.38 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
391 GST-overexpression seedlings control 0.53 >More info 0.40 >More info WT seedlings control Seedlings Original data
392 5-Triiodobenzoic acid3 h 0.37 >More info 0.56 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
393 mkk2 24h BTH rep 0.40 >More info 0.53 >More info Col-0 24h BTH rep Original data GEO bulk
394 miR393 0h -0.28 >More info -0.65 >More info WT 0h Leaf tissue Original data GEO bulk
395 0.125 mM gold 24 h 0.39 >More info 0.54 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
396 HSP90 Reduced RNAi-B1 0.38 >More info 0.55 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
397 root Dosed gold 0.39 >More info 0.54 >More info root No gold .125 mM gold 24 h roots Original data
398 toc1-1-85hr 0.51 >More info 0.42 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
399 Mutant nph4-1_arf19-1 0.35 >More info 0.58 >More info Col Original data GEO bulk
400 oas-a1.1 Cd 18h 0.24 >More info 0.69 >More info Cd 18h root Root Original data GEO bulk
401 1 h Light IP RNA -0.43 >More info -0.50 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
402 Tsu -Fe 24h Shoots 0.52 >More info 0.40 >More info Tsu +Fe 24h Shoots Original data GEO bulk
403 noa1-2 0.58 >More info 0.34 >More info Col-0 whole seedlings Original data GEO bulk
404 coi1-2 0.33 >More info 0.59 >More info Col-0 mock Whole seedling Original data GEO bulk
405 Rsch 1d 0.42 >More info 0.50 >More info Rsch CA Leaves Original data
406 etr1 1% sucrose 12-day-old 0.52 >More info 0.39 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
407 toc1-1-73hr 0.51 >More info 0.40 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
408 short 8-degree- 0.39 >More info 0.52 >More info control short Original data GEO bulk
409 eds16 whole leaf 7d UI -0.38 >More info -0.53 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
410 cs26 short-day -0.40 >More info -0.51 >More info Leaves-WT-SD leaf Original data GEO bulk
411 msh1 recA3 untreated 0.38 >More info 0.53 >More info WT untreated above-ground parts Original data GEO bulk
412 Leafminer systemically damaged thaliana seedlings 0.50 >More info 0.41 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
413 leaf chr11-1chr17-1 0.50 >More info 0.41 >More info leaf Col-0 leaves Original data GEO bulk
414 aerial organ callus inducing medium 12 h 0.32 >More info 0.59 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
415 bHLH122 ox -0.33 >More info -0.58 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
416 rosette leaves bdg 0.56 >More info 0.34 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
417 short 10-degree- 0.37 >More info 0.53 >More info control short Original data GEO bulk
418 Nicotinamide-49hr 0.40 >More info 0.50 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
419 sicy-192 cotyledons 0.30 >More info 0.60 >More info WT cotyledons cotyledons Original data
420 WT flg22 1h 0.51 >More info 0.38 >More info WT 0h Leaf tissue Original data GEO bulk
421 vte2 leaves 48h LT 0.52 >More info 0.37 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
422 P.p 6hai 0.39 >More info 0.50 >More info At-Control roots Original data GEO bulk
423 WT Seedling BL -0.35 >More info -0.54 >More info WT Seedling Dark Original data GEO bulk
424 toc1-1-93hr 0.58 >More info 0.31 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
425 Dark 2day wt 0.57 >More info 0.32 >More info 0h wt Original data
426 Col-0 INA 6d 0.31 >More info 0.58 >More info Col-0 MOCK 6d Original data GEO bulk
427 35S:RPS4 eds1-2 2h -0.31 >More info -0.58 >More info 35S:RPS4 2h leaves Original data
428 atsf1-2 mutant seedling 0.34 >More info 0.54 >More info Col-0 seedling seedlings Original data
429 WT seedlings MV 0.52 >More info 0.36 >More info WT seedlings control Seedlings Original data GEO bulk
430 Mutant arf2-6 (IAA) -0.64 >More info -0.24 >More info Col (IAA) Original data GEO bulk
431 35S-MIF1 light grown 0.60 >More info 0.28 >More info Light-grown WT control Original data GEO bulk
432 amiR-tor induced 6d 0.23 >More info 0.65 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
433 NJ15 0.31 >More info 0.57 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
434 Dex-rga(delta17) 2h GA4+DEX -0.54 >More info -0.33 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
435 Dark 2day hml 0.53 >More info 0.34 >More info 0h hml Original data
436 IXB induced 0.31 >More info 0.56 >More info Methanol IXB Suspension cells Original data GEO bulk
437 AFB1 flg22 2h 0.52 >More info 0.35 >More info WT 0h Leaf tissue Original data GEO bulk
438 dense canopy 0.29 >More info 0.58 >More info single (control) petiole Original data GEO bulk
439 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.66 >More info -0.20 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
440 Aerobic e1 ate2 0.32 >More info 0.54 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
441 msh1 recA3 heat shock 0.50 >More info 0.36 >More info WT heat shock above-ground parts Original data GEO bulk
442 AFB1 flg22 1h 0.50 >More info 0.36 >More info WT 0h Leaf tissue Original data GEO bulk
443 Ba1 UV 0.16 >More info 0.70 >More info Ba1 mock UV seedling Original data
444 Dark 3day wt 0.52 >More info 0.33 >More info 0h wt Original data
445 21h-DC3000 avrRpm1 -0.55 >More info -0.30 >More info 21h-DC3000 leaves Original data GEO bulk
446 short 14-degree- 0.32 >More info 0.53 >More info control short Original data GEO bulk
447 Nicotinamide-69hr 0.34 >More info 0.51 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
448 P.p 10.5hai 0.32 >More info 0.53 >More info At-Control roots Original data GEO bulk
449 P.p 30hai 0.34 >More info 0.51 >More info At-Control roots Original data GEO bulk
450 iae1 -0.34 >More info -0.51 >More info B179 Original data GEO bulk
451 Mutant sav3-2 (SH) 0.26 >More info 0.59 >More info Col-0 (SH) Original data GEO bulk
452 sav3-2 shade 0.26 >More info 0.59 >More info Col-0 shade seedlings Original data GEO bulk
453 PNO8 12 h -0.32 >More info -0.52 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
454 long 12-degree- 0.28 >More info 0.56 >More info control long Original data GEO bulk
455 seedling 24h after HZE WT 0.34 >More info 0.50 >More info seedling day 2 unirradiated WT 24h Original data
456 35S:VND7-VP16-GR+CHX 0.60 >More info 0.24 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
457 GA 0.25 >More info 0.59 >More info none GA Rosette Original data GEO bulk
458 AtLysM RLK1 mutant water 0.26 >More info 0.58 >More info WT water Original data GEO bulk
459 35S::ZAT12 0.54 >More info 0.29 >More info gl1 Original data GEO bulk
460 Dark 6h ivd 0.54 >More info 0.29 >More info 0h ivd Original data
461 rpl24 nonpolysome 0.52 >More info 0.31 >More info WT nonpolysome seedling shoot/aerial seedling Original data
462 Ambient CO2 LIMITING N DAY 0.51 >More info 0.32 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
463 nas4x leaves - Fe -0.33 >More info -0.50 >More info WT leaves - Fe Leaves Original data GEO bulk
464 1 h Light Total RNA -0.33 >More info -0.50 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
465 mbd6 mutant thaliana 10-day-old seedling 0.31 >More info 0.52 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
466 Mutant axr3-1 (IAA) 0.21 >More info 0.62 >More info Col (IAA) Original data GEO bulk
467 root - 01% oxygen - 48h 0.26 >More info 0.57 >More info root - 21% oxygen - 48h Original data GEO bulk
468 Leaf wounded 0.23 >More info 0.60 >More info Leaf control vegetative leaf Original data GEO bulk
469 Col-0 mbs1-1 HL 0h 0.50 >More info 0.32 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
470 G3P 0.62 >More info 0.20 >More info Mock distal leaves Original data GEO bulk
471 eds16 whole leaf 7dpi -0.28 >More info -0.54 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
472 Transgenic LEC2GR Seedling 1h Dex 0.27 >More info 0.55 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
473 IRP1-OE-Ctrl--root 0.27 >More info 0.55 >More info COL-0-Ctrl--root root Original data
474 Cambium 5 days NAA 0.25 >More info 0.57 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
475 Shoot P recovery 0.53 >More info 0.28 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
476 AtMYB30-as 90-105 min Xanthomonas 0.52 >More info 0.29 >More info WT 90-105 min Xanthomonas Original data GEO bulk
477 WT 1mM phosphate 8 hours. -0.51 >More info -0.30 >More info WT control (not supplemented). Original data
478 Got7 UV 0.30 >More info 0.51 >More info Got7 mock UV seedling Original data
479 ORS1 induced 0.30 >More info 0.51 >More info mock-induced rosette leaves Original data GEO bulk
480 WT+chitooctaose 0.31 >More info 0.50 >More info WT+water chitooctaose seedlings Original data GEO bulk
481 camta1/3 warm 0.29 >More info 0.52 >More info WT warm entire aerial part Original data GEO bulk
482 35S::LFY 0.30 >More info 0.51 >More info Landsberg erecta seedlings Original data GEO bulk
483 AsAKiin11 T1 0.20 >More info 0.61 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
484 Col laser microdissected 5 dpi 0.23 >More info 0.58 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
485 erf5 erf6 -0.50 >More info -0.30 >More info WT+water water seedlings Original data GEO bulk
486 phyB mutant 22C 10hrs -0.27 >More info -0.53 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
487 abi1 hypocotyl 0.19 >More info 0.61 >More info Ler hypocotyl hypocotyl Original data GEO bulk
488 rosettes myoox drought 0.51 >More info 0.28 >More info rosettes myoox watered Original data GEO bulk
489 short 17-degree- 0.28 >More info 0.51 >More info control short Original data GEO bulk
490 cdkf:1-2 0.29 >More info 0.50 >More info wt seedling young seedlings Original data GEO bulk
491 MPK6 ox Shoot Hypoxia 0.56 >More info 0.22 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
492 FarRed Light 45min -0.16 >More info -0.62 >More info White Light 45min Original data Light treatments
493 Selenate (shoot) 0.27 >More info 0.51 >More info Ws (shoot) Original data GEO bulk
494 eds16 whole leaf 0h UI -0.12 >More info -0.66 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
495 Col in Pi deficiency medium 0.05 >More info 0.73 >More info Col in control medium root Original data GEO bulk
496 atmyc2 Seedling BL -0.11 >More info -0.67 >More info WT Seedling BL Original data GEO bulk
497 Shoot Selenate 0.27 >More info 0.51 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
498 hira-root -0.17 >More info -0.61 >More info WT-root root Original data
499 CeO2 germinant -0.26 >More info -0.52 >More info Millipore Water germinant CeO2 seedling Original data
500 OE-HRA1 2HS  0.52 >More info 0.25 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
501 penta Control 0.51 >More info 0.26 >More info Laer Control leaf discs Original data GEO bulk
502 Whole root - S 3H 0.27 >More info 0.50 >More info Whole root - S 0H Original data GEO bulk
503 seedling 3h after Gamma WT 0.20 >More info 0.57 >More info seedling day 1 unirradiated WT 3h Original data
504 WT NAA 2h -0.21 >More info -0.55 >More info WT 0h Leaf tissue Original data GEO bulk
505 opr3 OPDA 2 h 0.07 >More info 0.69 >More info opr3 0 h Original data GEO bulk
506 seedling 12h after HZE WT 0.25 >More info 0.51 >More info seedling day 1 unirradiated WT 12h Original data
507 Cocultivation 8 hrs root 0.26 >More info 0.50 >More info Mock cocultivation 8 hrs root Root Original data
508 Mutant cry1 -0.59 >More info -0.16 >More info Col-0 Original data GEO bulk
509 gpa1-4/agb1-2 clean-air 3h -0.51 >More info -0.24 >More info Col clean-air 3h clean-air Original data GEO bulk
510 cry1 low light -0.59 >More info -0.16 >More info Col-O low light Original data GEO bulk
511 gpa1 -ABA GC -0.24 >More info -0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
512 cngc1-3 0.21 >More info 0.54 >More info Col-0 root Original data GEO bulk
513 abi4-102 (II) 0.25 >More info 0.50 >More info Col (II) rosette Original data GEO bulk
514 IAA7mII over-expressor IAA Treated 0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
515 tmm1-inflorescence-tips 0.23 >More info 0.51 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
516 root epidermis and lateral root cap pH4.6 0.21 >More info 0.52 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
517 SA Treated 0.64 >More info 0.08 >More info Water Original data GEO bulk
518 hyl1 0.20 >More info 0.52 >More info Col-0 Original data GEO bulk
519 BLM 0.15 >More info 0.57 >More info CK BLM seedling Original data
520 shoot control pSultr2:2 -0.54 >More info -0.17 >More info shoot control total Original data GEO bulk
521 vte2 leaves 120h LT 0.67 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
522 plant (tga2-5-6) 4h control 0.53 >More info 0.18 >More info plant (Col-0) 4h control Original data GEO bulk
523 sid2-1 warm -0.51 >More info -0.20 >More info WT warm entire aerial part Original data GEO bulk
524 Col-0 24hpi A. brassicicola 0.69 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
525 Mutant tga2_5_6 0.53 >More info 0.18 >More info Col-0 Original data GEO bulk
526 elf3-7-16ºC 0.21 >More info 0.50 >More info WT-16ºC Original data GEO bulk
527 +GA-180mins -0.19 >More info -0.52 >More info -180mins whole plant Original data GEO bulk
528 calcicole ecotype Cal-0 0.55 >More info 0.15 >More info Col-4 1 mM CaCl2 Original data GEO bulk
529 24h light (+Lincomycin) 0.17 >More info 0.53 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
530 HairpinZ 4 h (leaf) 0.73 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
531 ABA SA 24h 0.06 >More info 0.64 >More info EtOH 24h 24hr Original data GEO bulk
532 OsTOP6B ox 0.53 >More info 0.15 >More info WT Original data GEO bulk
533 FLIGHT TAGESB plate6 ROOTS 0.12 >More info 0.55 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
534 bri1-116 -0.06 >More info 0.73 >More info Col seedling Original data GEO bulk
535 Tsu-1 -Fe 24h 0.05 >More info 0.61 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
536 Tsu -Fe 24h Roots 0.05 >More info 0.61 >More info Tsu +Fe 24h Roots Original data GEO bulk
537 seedling 24h after HZE atm-1 0.09 >More info 0.57 >More info seedling day 2 unirradiated atm-1 24h Original data
538 JA 3h 0.01 >More info 0.64 >More info EtOH 3h 3hr Original data GEO bulk
539 12m.KCl 0.11 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
540 Stem tissue 2 days NAA 0.02 >More info 0.62 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
541 Col PSTDC3000 24h 0.76 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
542 Truncated AC2 T2 -0.58 >More info -0.05 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
543 Red/FR Light45min 0.03 >More info 0.59 >More info FarRed Light 45min Original data Light treatments
544 root endodermis and quiescent center pH4.6 0.11 >More info 0.51 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
545 rdr6-15 -0.05 >More info -0.57 >More info Col-0 plant inflorescence Original data
546 root - 04% oxygen - 2h 0.09 >More info 0.52 >More info root - 21% oxygen - 2h Original data GEO bulk
547 P.syringae vir 4 h (leaf) 0.57 >More info 0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
548 Imbibed 1 h (seed) 0.07 >More info 0.52 >More info Dry seed Original data Time course of early seed germination
549 16C 4hs -0.06 >More info -0.53 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
550 seed germinating in countinuous light 24h SL -0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
551 nhx5-2/nhx6 0.51 >More info 0.08 >More info WT Rosette leaf Original data GEO bulk
552 cat2-2; 0h switch to ambient CO2 concentrations; -0.53 >More info -0.05 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
553 pvip1 pvip2 seedling 0.60 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
554 RGA-GR-DEX 0.08 >More info 0.50 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
555 des1.1 0.01 >More info 0.57 >More info Leaves-WT leaf Original data GEO bulk
556 0h hml 0.56 >More info 0.01 >More info 0h wt Original data
557 nhx5-1/nhx6 0.51 >More info 0.06 >More info WT Rosette leaf Original data GEO bulk
558 WT Atum 1h 0.07 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
559 P. infestans 6 h (leaf) 0.71 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
560 pab polysome 0.03 >More info 0.52 >More info WT polysome seedling shoot/aerial seedling Original data
561 opr3 JA 2 h -0.02 >More info 0.57 >More info opr3 0 h Original data GEO bulk
562 35SAvr -0.08 >More info 0.62 >More info Ecotype Col Original data GEO bulk
563 WT NAA 1h 0.13 >More info -0.67 >More info WT 0h Leaf tissue Original data GEO bulk
564 ABA JA 24h -0.12 >More info 0.66 >More info EtOH 24h 24hr Original data GEO bulk
565 1h +Pi 0.06 >More info -0.57 >More info 1h -Pi root Original data GEO bulk
566 Whole root - low pH 6H -0.00 >More info 0.50 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
567 4C 1h -0.09 >More info 0.57 >More info 4C 0h Original data GEO bulk
568 -Sulfate 24 h -0.04 >More info 0.51 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
569 root - 04% oxygen - 48h -0.06 >More info 0.52 >More info root - 21% oxygen - 48h Original data GEO bulk
570 CCA1-ox 6am non-polysomal -0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
571 Shoot apex inflorescence (after bolting) -0.23 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
572 DUO1 induced 6h -0.53 >More info 0.26 >More info 6hr-not-induced whole plant Original data GEO bulk
573 Light 3day hml -0.40 >More info 0.61 >More info 0h hml Original data