4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT 3H Cold
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List of experiments correlated with "WT 3H Cold"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT 3H Cold		 Correlation to
WT 3H Cold		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT 3H Cold 1.00 >More info 1.00 >More info WT control Original data GEO bulk
2 WT 6H Cold 0.89 >More info 0.86 >More info WT control Original data GEO bulk
3 4C 2h(SOIL) 0.81 >More info 0.88 >More info 4C 0h(SOIL) Original data GEO bulk
4 myb61 xylem 0.85 >More info 0.73 >More info wt xylem xylem Original data GEO bulk
5 whole roots 140 mM NaCl 30 minutes 0.81 >More info 0.70 >More info whole roots standard Original data GEO bulk
6 Leaf wounded 0.74 >More info 0.76 >More info Leaf control vegetative leaf Original data GEO bulk
7 Col 8h 0.77 >More info 0.73 >More info Col CA Leaves Original data
8 WT 24H Cold 0.81 >More info 0.68 >More info WT control Original data GEO bulk
9 4C 1h 0.67 >More info 0.82 >More info 4C 0h Original data GEO bulk
10 WT-Dry 0.75 >More info 0.70 >More info WT-CK dehydration treatment 1h Original data
11 whole roots 140 mM NaCl 1 hour 0.82 >More info 0.62 >More info whole roots standard Original data GEO bulk
12 FLIGHT TAGESB plate6 ROOTS 0.78 >More info 0.66 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
13 Protoplast Induced 0.74 >More info 0.69 >More info Uninduced Original data GEO bulk
14 Atss3 Dark4 -0.77 >More info -0.63 >More info Atss3 Dark0.5 Original data GEO bulk
15 Rsch 8h 0.79 >More info 0.56 >More info Rsch CA Leaves Original data
16 myb61 cork 0.74 >More info 0.61 >More info wt cork cork Original data GEO bulk
17 rosette Dark Wounded 0.79 >More info 0.55 >More info rosette Dark Control Original data GEO bulk
18 Leafminer damaged seedlings 0.78 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
19 Te 8h 0.76 >More info 0.56 >More info Te CA Leaves Original data
20 seedling 6h after HZE WT 0.82 >More info 0.50 >More info seedling day 1 unirradiated WT 6h Original data
21 Selenate (root) 0.72 >More info 0.60 >More info Ws (root) Original data GEO bulk
22 Root Selenate 0.72 >More info 0.60 >More info Root control 40 micromolar selenate Root Original data GEO bulk
23 abi1 hypocotyl 0.70 >More info 0.62 >More info Ler hypocotyl hypocotyl Original data GEO bulk
24 Ws 100mM NaCl 0.72 >More info 0.59 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
25 Ws leaf 100mM NaCl 0.72 >More info 0.59 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
26 WT drought 0.71 >More info 0.58 >More info WT control All aerial tissue Original data GEO bulk
27 OsSAP11 expressing -0.75 >More info -0.54 >More info WT seedlings Original data GEO bulk
28 bHLH122 ox -0.74 >More info -0.55 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
29 OsRLCK253 expressing -0.74 >More info -0.54 >More info WT seedlings Original data GEO bulk
30 Atss3 Dark8 -0.72 >More info -0.54 >More info Atss3 Dark0.5 Original data GEO bulk
31 Col leaf 100mM NaCl 0.74 >More info 0.51 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
32 Col leaf 100mM NaCl 0.74 >More info 0.51 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
33 Col 100mM NaCl 0.74 >More info 0.51 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
34 Differentiation 36h -0.81 >More info -0.44 >More info Differentiation 0h leaves Original data
35 TNT-seedlings 0.51 >More info 0.74 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
36 triploid female excess -0.57 >More info -0.68 >More info tetraploid Original data GEO bulk
37 Kas -Fe 24h Roots -0.57 >More info -0.66 >More info Kas +Fe 24h Roots Original data GEO bulk
38 SOS1 0mM NaCl 0.79 >More info 0.44 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
39 aba1 hypocotyl 0.69 >More info 0.54 >More info Ler hypocotyl hypocotyl Original data GEO bulk
40 Kas-1 -Fe 24h -0.57 >More info -0.66 >More info Kas-1 +Fe 24h roots Original data GEO bulk
41 npr1 sni1 brca2a SA -0.73 >More info -0.50 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
42 Differentiation 48h -0.80 >More info -0.42 >More info Differentiation 0h leaves Original data
43 Leafminer locally damaged thaliana seedlings 0.78 >More info 0.43 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
44 35S:RPS4 eds1-2 2h -0.60 >More info -0.61 >More info 35S:RPS4 2h leaves Original data
45 anti-sense for AtAOX1a 0.73 >More info 0.48 >More info WT Original data GEO bulk
46 rosette Light Wounded 0.75 >More info 0.46 >More info rosette Light Control Original data GEO bulk
47 seedling 12h after HZE WT 0.81 >More info 0.39 >More info seedling day 1 unirradiated WT 12h Original data
48 tetraploid 0.54 >More info 0.66 >More info diploid Original data GEO bulk
49 frb1 mutant 0.55 >More info 0.65 >More info WT whole seedling Original data GEO bulk
50 max4 hypocotyl 0.72 >More info 0.47 >More info wt hypocotyl hypocotyl Original data GEO bulk
51 gpa1-4/agb1-2 ozone 3h 0.60 >More info 0.59 >More info Col ozone 3h ozone Original data GEO bulk
52 Cold Stress 24 h (root) 0.71 >More info 0.48 >More info Stress mock 24 h (root) Original data Stress treatments
53 IXB induced 0.65 >More info 0.53 >More info Methanol IXB Suspension cells Original data GEO bulk
54 Roots Cd -0.60 >More info -0.58 >More info Roots control Cd Root Original data GEO bulk
55 1h +Pi -0.61 >More info -0.57 >More info 1h -Pi root Original data GEO bulk
56 Salt Stress 24 h (root) 0.74 >More info 0.44 >More info Stress mock 24 h (root) Original data Stress treatments
57 phyABCDE 4-day dark- 2 hours Rc50 0.65 >More info 0.52 >More info phyABCDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
58 2hr transitory KNO3 PrR cell 0.73 >More info 0.44 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
59 Differentiation 24h -0.79 >More info -0.38 >More info Differentiation 0h leaves Original data
60 CBF3 0mM NaCl 0.74 >More info 0.42 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
61 root cells endodermis and quiescent center -Fe 0.73 >More info 0.43 >More info whole roots standard Original data GEO bulk
62 WT resupplied Pi 4h 0.73 >More info 0.43 >More info WT complete seedlings Original data
63 Cold Stress 24 h (shoot) 0.70 >More info 0.46 >More info Stress mock 24 h (shoot) Original data Stress treatments
64 wrky72-2-MOCK 0.62 >More info 0.53 >More info WT-MOCK Original data GEO bulk
65 root protoplasts 40 mM NaCl 0.71 >More info 0.44 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
66 A. thaliana-A. lyrata hybrid -0.79 >More info -0.36 >More info A. thaliana mature leaves before flowering Original data GEO bulk
67 ex2 flu dark 8hours/30 minute light 0.53 >More info 0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
68 WT cold 12 h 0.65 >More info 0.50 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
69 35S::MBF1c 0.64 >More info 0.50 >More info control Original data GEO bulk
70 sid2-avrB-6h 0.58 >More info 0.56 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
71 wnk8-2 untreated -0.58 >More info -0.56 >More info Col-0 untreated seedlings Original data GEO bulk
72 M6PR transgenic 0mM NaCl 0.71 >More info 0.43 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
73 root stele 40 mM NaCls 0.72 >More info 0.42 >More info root stele Original data GEO bulk
74 Cycloheximide 3 h 0.70 >More info 0.44 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
75 vtc2 mature somatic embryo 0.71 >More info 0.43 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
76 Leafminer systemically damaged thaliana seedlings 0.66 >More info 0.47 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
77 whole roots 140 mM NaCl 4 hour 0.63 >More info 0.49 >More info whole roots standard Original data GEO bulk
78 root cells columella root cap -Fe 0.74 >More info 0.38 >More info whole roots standard Original data GEO bulk
79 WUSp cells 0.73 >More info 0.39 >More info Protoplast Induced Original data GEO bulk
80 mutant acs6E (single mutant) -0.62 >More info -0.50 >More info col control (single mutant) Original data GEO bulk
81 chito-tetramer 0.68 >More info 0.43 >More info Col Mock Original data GEO bulk
82 WT no Pi 0.77 >More info 0.34 >More info WT complete seedlings Original data
83 Col-0 under 4 days salt 0.69 >More info 0.42 >More info Col-0 under control 4 days salt treatment rosette Original data
84 hai1-2 low water potential 0.72 >More info 0.39 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
85 atmospheric CO2 high Mg shoot 0.76 >More info 0.35 >More info atmospheric CO2 normal Mg shoot Shoot Original data
86 NaCl Col 0.63 >More info 0.48 >More info Col Original data GEO bulk
87 NJ15 0.74 >More info 0.37 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
88 1 h Light Total RNA -0.60 >More info -0.51 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
89 npr1 sni1 SA 0.69 >More info 0.42 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
90 WT (Col-0) inflorescence drought day 4 0.64 >More info 0.47 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
91 15m.KCl 0.58 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
92 axr1 hypocotyl 0.71 >More info 0.39 >More info wt hypocotyl hypocotyl Original data GEO bulk
93 ein5-1 ski2-3 0.64 >More info 0.46 >More info Col-0 aerial tissue Original data
94 CDB1-Knockout -0.55 >More info -0.55 >More info WT Original data GEO bulk
95 root cells stele -Fe 0.70 >More info 0.40 >More info whole roots standard Original data GEO bulk
96 Col 1d 0.67 >More info 0.43 >More info Col CA Leaves Original data
97 12m.KCl 0.54 >More info 0.56 >More info To. KCl 14 day old Roots Original data GEO bulk
98 CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold 0.64 >More info 0.46 >More info CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 12h cold (4C) rosettes Original data GEO bulk
99 WT+chitooctaose 0.67 >More info 0.43 >More info WT+water chitooctaose seedlings Original data GEO bulk
100 GiantCell Root -0.68 >More info -0.42 >More info Control Root laser captured giant cells Original data GEO bulk
101 oas-a1.1 Cd 24h 0.65 >More info 0.44 >More info Cd 24h root Shoot Original data GEO bulk
102 WT+H2O2 0.64 >More info 0.45 >More info WT H2O2 Original data GEO bulk
103 rdr1-1 -0.86 >More info -0.23 >More info Col-0 Original data GEO bulk
104 AsAKiin11 T3 -0.77 >More info -0.32 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
105 TA induced 0.63 >More info 0.46 >More info Methanol TA Suspension cells Original data GEO bulk
106 SA 4mM 0.56 >More info 0.53 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
107 wrky72-1-MOCK 0.58 >More info 0.51 >More info WT-MOCK Original data GEO bulk
108 root cells -Fe 0.70 >More info 0.39 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
109 Col0-PsmES4326-24hpi 0.48 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
110 seedling 6h after HZE atm-1 0.69 >More info 0.39 >More info seedling day 1 unirradiated atm-1 6h Original data
111 lug3 flowers 0.70 >More info 0.38 >More info WT-flowers flowers Original data GEO bulk
112 rosette leaves lcr 0.65 >More info 0.43 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
113 flu dark 8hours/30 minute light 0.43 >More info 0.65 >More info col dark 8hours/30 minute light Original data GEO bulk
114 3x(m) 0.30 >More info 0.78 >More info 2x two week old seedlings Original data
115 ice1 control 0.56 >More info 0.51 >More info WT control Original data GEO bulk
116 WT seedlings MV 0.68 >More info 0.39 >More info WT seedlings control Seedlings Original data GEO bulk
117 root epidermis and lateral root cap 40 mM NaCl 0.73 >More info 0.34 >More info root epidermis and lateral root cap Original data GEO bulk
118 FLIGHT TAGESB plate6 SHOOTS 0.65 >More info 0.41 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
119 P.syringae vir 4 h (leaf) 0.63 >More info 0.43 >More info Mock 4 h (leaf) Original data Elicitor treatments
120 elevated CO2 high Mg shoot -0.82 >More info -0.24 >More info atmospheric CO2 high Mg shoot Shoot Original data
121 Mutant axr3-1 (IAA) 0.59 >More info 0.46 >More info Col (IAA) Original data GEO bulk
122 coi1-2 0.55 >More info 0.50 >More info Col-0 mock Whole seedling Original data GEO bulk
123 HARAP aerobic -0.53 >More info -0.52 >More info WT aerobic aerobic Original data GEO bulk
124 psad1-1 stn7-1 -0.72 >More info -0.33 >More info Col-0 rosette leaves Original data GEO bulk
125 Nicotinamide-65hr 0.64 >More info 0.41 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
126 ex1 flu dark 8hours/30 minute light 0.43 >More info 0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
127 shoots bhlh100/101 100uM Fe 0.46 >More info 0.59 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
128 tunicamycin -0.48 >More info -0.57 >More info DMF Original data GEO bulk
129 1 h Light IP RNA -0.60 >More info -0.44 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
130 Heat shock optimum 0.39 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
131 mutant acs2C (single mutant) -0.55 >More info -0.48 >More info col control (single mutant) Original data GEO bulk
132 inhibitor B Treated 0.58 >More info 0.45 >More info Negative Control Original data GEO bulk
133 root callus inducing medium 48 h -0.77 >More info -0.26 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
134 root callus inducing medium 24h -0.76 >More info -0.27 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
135 FLIGHT TAGESB plate 0.75 >More info 0.28 >More info GROUND CONTROL TAGESB plate Original data
136 root - 08% oxygen - 48h -0.42 >More info -0.61 >More info root - 21% oxygen - 48h Original data GEO bulk
137 vtc1-1 -0.46 >More info -0.57 >More info Col-0 whole plant Original data GEO bulk
138 short 10-degree- 0.65 >More info 0.37 >More info control short Original data GEO bulk
139 WT Na2S -0.73 >More info -0.29 >More info WT water Na2S leaf Original data GEO bulk
140 phr1 Root-Pi 0.66 >More info 0.36 >More info WT Root+Pi roots Original data GEO bulk
141 downy mildew cotyledons early stage -0.63 >More info -0.39 >More info mock inoculated Cotyledons Original data GEO bulk
142 GA 0.56 >More info 0.46 >More info none GA Rosette Original data GEO bulk
143 whole roots 140 mM NaCl 32 hour 0.50 >More info 0.52 >More info whole roots standard Original data GEO bulk
144 ABA 1 h 0.34 >More info 0.68 >More info Mock 1 h Original data Basic hormone treatment of seedlings
145 rli 0.71 >More info 0.30 >More info WT whole plant Original data GEO bulk
146 anac017-2 H2O2 3h -0.61 >More info -0.40 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
147 toc1-1-73hr 0.41 >More info 0.60 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
148 npr1 sni1 ssn2 SA -0.59 >More info -0.41 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
149 root cells cortex -Fe 0.74 >More info 0.26 >More info whole roots standard Original data GEO bulk
150 rosette leaves fdh 0.72 >More info 0.28 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
151 Col-0-3h IAA 0.77 >More info 0.23 >More info Col-0-0h IAA whole plant Original data GEO bulk
152 CMV-A2b mutant 0.73 >More info 0.27 >More info Mock-At Aerial tissues Original data GEO bulk
153 35S::RSL4 -0.57 >More info -0.43 >More info Col-0 Control root Original data GEO bulk
154 9m.KCl 0.65 >More info 0.35 >More info To. KCl 14 day old Roots Original data GEO bulk
155 root callus inducing medium 96 h -0.75 >More info -0.25 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
156 tfl1-1-23ºC 0.63 >More info 0.36 >More info WT-23ºC Original data GEO bulk
157 2 hr Hypoxia Total RNA 0.67 >More info 0.32 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
158 whole roots 140 mM NaCl 16 hour 0.63 >More info 0.36 >More info whole roots standard Original data GEO bulk
159 IRP1-OE-Ctrl--root 0.64 >More info 0.35 >More info COL-0-Ctrl--root root Original data
160 ref6-1 0.56 >More info 0.43 >More info Col whole seedling Original data GEO bulk
161 9 hr Hypoxia 1 hr recovery IP RNA 0.66 >More info 0.33 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
162 npr1-3 MOCK 48h -0.36 >More info -0.63 >More info Col-0 MOCK 48h Original data GEO bulk
163 wnk8-1 untreated -0.48 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
164 pXVE:HA-EDM2-a untreated -0.46 >More info -0.53 >More info Col-0 untreated seedlings Original data GEO bulk
165 seedling 6h after Gamma atm-1 0.57 >More info 0.41 >More info seedling day 1 unirradiated atm-1 6h Original data
166 dorn1-1 Root 100 mM ATP 30 min -0.57 >More info -0.41 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
167 1hr-pH4.5 0.59 >More info 0.39 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
168 9 hr Hypoxia 1 hr recovery Total RNA 0.65 >More info 0.33 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
169 shoot-10 μM DEX- 6 hr 0.54 >More info 0.44 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
170 erf115ko roottip5days -0.58 >More info -0.40 >More info Col-0 roottip5days root tips Original data
171 Apex mir-3TCP 14DAS -0.58 >More info -0.40 >More info Apex Col 14DAS Original data GEO bulk
172 Osmotic Stress 24 h (root) 0.62 >More info 0.36 >More info Stress mock 24 h (root) Original data Stress treatments
173 root callus inducing medium 12 h -0.73 >More info -0.24 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
174 WT 24h cold 0.66 >More info 0.31 >More info WT warm 24h cold entire aerial part Original data GEO bulk
175 9 hr Hypoxia IP RNA 0.66 >More info 0.31 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
176 rdr6-15 -0.79 >More info -0.18 >More info Col-0 Original data GEO bulk
177 root longitudinal zone-4 NaCl 0.44 >More info 0.53 >More info root longitudinal zone-4 Original data GEO bulk
178 cpr5 sim smr1 -0.51 >More info -0.45 >More info WT seedling Original data GEO bulk
179 Rose Bengal 0.5 uM 0.45 >More info 0.51 >More info Control RB and PER Rose Bengal Original data
180 2 hr Hypoxia IP RNA 0.67 >More info 0.28 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
181 AtLysM RLK1 mutant chitooctaose -0.61 >More info -0.34 >More info WT chitooctaose Original data GEO bulk
182 WT Shoot-Pi 0.64 >More info 0.31 >More info WT Shoot+Pi shoots Original data GEO bulk
183 sim smr1 -0.50 >More info -0.45 >More info WT seedling Original data GEO bulk
184 root cells epidermis and lateral root cap -Fe 0.63 >More info 0.32 >More info whole roots standard Original data GEO bulk
185 2hr transitory KNO3 SR cell 0.58 >More info 0.37 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
186 seedling -S Exp 0.50 >More info 0.45 >More info seedling FN Exp seedling Original data
187 ABA 3 h 0.42 >More info 0.53 >More info Mock 3 h Original data Basic hormone treatment of seedlings
188 hst5 0.75 >More info 0.19 >More info Col-0 Original data GEO bulk
189 Col-0 2HS 0.71 >More info 0.23 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
190 cys-c1 root -0.62 >More info -0.32 >More info Root-WT roots Original data GEO bulk
191 chito-octamer 0.51 >More info 0.43 >More info Col Mock Original data GEO bulk
192 Col-0 +ABA LF 0.57 >More info 0.37 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
193 MIL4 ox -0.53 >More info -0.41 >More info Col Original data GEO bulk
194 opr3 JA 0.5 h 0.37 >More info 0.57 >More info opr3 0 h Original data GEO bulk
195 2hr continuous KNO3 PrR cell 0.67 >More info 0.26 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
196 GST 4 h (leaf) 0.65 >More info 0.28 >More info Mock 4 h (leaf) Original data Elicitor treatments
197 flu over-tAPX 0.66 >More info 0.27 >More info WT Col Original data GEO bulk
198 Kas-1 -Fe 48h -0.52 >More info -0.41 >More info Kas-1 +Fe 24h roots Original data GEO bulk
199 Kas -Fe 48h Roots -0.52 >More info -0.41 >More info Kas +Fe 24h Roots Original data GEO bulk
200 WT Seedling BL+ABA 0.59 >More info 0.34 >More info WT Seedling BL Original data GEO bulk
201 Heat and anoxia 0.63 >More info 0.30 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
202 shoot-10 μM DEX- 24hr 0.57 >More info 0.36 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
203 Leaf systemic 0.52 >More info 0.41 >More info Leaf control vegetative leaf Original data GEO bulk
204 Col-0-30min IAA 0.74 >More info 0.19 >More info Col-0-0h IAA whole plant Original data GEO bulk
205 lht1 PstDC3000 48h -0.61 >More info -0.32 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
206 siliques AtHb1 control 0.41 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
207 irradiated leaf (WT 1d) 0.66 >More info 0.26 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
208 ABA 0.5 h 0.52 >More info 0.40 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
209 WT (Col-0) inflorescence drought day 5 0.51 >More info 0.41 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
210 1.5 hr ammonium 0.61 >More info 0.31 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
211 Differentiation 12h -0.70 >More info -0.22 >More info Differentiation 0h leaves Original data
212 Anoxia 0.62 >More info 0.30 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
213 Osmotic Stress 24 h (shoot) 0.56 >More info 0.35 >More info Stress mock 24 h (shoot) Original data Stress treatments
214 short 8-degree- 0.68 >More info 0.23 >More info control short Original data GEO bulk
215 Col-0 low oxygen 0.54 >More info 0.37 >More info Col-0 control low oxygen root Original data GEO bulk
216 ein3 eil1 0.54 >More info 0.37 >More info Col-0 mock Whole seedling Original data GEO bulk
217 Whole root - low pH 3H 0.39 >More info 0.52 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
218 toc1-1-77hr 0.58 >More info 0.33 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
219 Light 0.73 >More info 0.18 >More info Control Original data GEO bulk
220 camta1/2 warm -0.60 >More info -0.31 >More info WT 24h cold entire aerial part Original data GEO bulk
221 FLIGHT TAGES 2B plate6 HYPOCOTYLS 0.69 >More info 0.22 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
222 Nicotinamide-73hr 0.61 >More info 0.30 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
223 bak1-3 +Pep2 10h 0.56 >More info 0.34 >More info WT +Pep2 10h Pep2 Original data GEO bulk
224 mutant acs4A (single mutant) -0.55 >More info -0.35 >More info col control (single mutant) Original data GEO bulk
225 GiantCell Root -0.70 >More info -0.20 >More info Control Root laser captured giant cells Original data GEO bulk
226 seedlings protease IV 0.61 >More info 0.29 >More info seedlings nontreated control whole seedling Original data
227 penta MeJA 1h 0.69 >More info 0.21 >More info Laer MeJA 1h leaf discs Original data GEO bulk
228 Nicotinamide-69hr 0.58 >More info 0.32 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
229 aox1a(line) MLD stressed 0.60 >More info 0.30 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
230 A. lyrata -0.72 >More info -0.18 >More info A. thaliana mature leaves before flowering Original data GEO bulk
231 Col(gl) leaf 100mM NaCl -0.55 >More info -0.34 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
232 shoot-10 μM DEX- 12 hr 0.56 >More info 0.33 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
233 mutant acs2B (single mutant) -0.56 >More info -0.33 >More info col control (single mutant) Original data GEO bulk
234 Col(gl) 100mM NaCl -0.55 >More info -0.34 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
235 mil4 sid2 -0.52 >More info -0.37 >More info Col rosettes Original data GEO bulk
236 flu 0.61 >More info 0.28 >More info WT Col Original data GEO bulk
237 sfr6 drought -0.51 >More info -0.38 >More info WT drought All aerial tissue Original data GEO bulk
238 Col-0-1h IAA 0.75 >More info 0.14 >More info Col-0-0h IAA whole plant Original data GEO bulk
239 9 hr Hypoxia Total RNA 0.61 >More info 0.28 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
240 SHR-GR Time 12H Dex -0.52 >More info -0.37 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
241 Laer pretreat GA Flg22 1h 0.18 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
242 2hr continuous KNO3 ECR cell 0.65 >More info 0.23 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
243 Col light-dark EtOH 0.63 >More info 0.25 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
244 Nicotinamide-93hr 0.58 >More info 0.30 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
245 Lipopolysaccaride4 h (leaf) 0.55 >More info 0.32 >More info Mock 4 h (leaf) Original data Elicitor treatments
246 Nicotinamide-57hr 0.55 >More info 0.32 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
247 seedling 24h after HZE atm-1 0.71 >More info 0.16 >More info seedling day 2 unirradiated atm-1 24h Original data
248 Nicotinamide-89hr 0.65 >More info 0.22 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
249 FHY3p dark+DEX -0.60 >More info -0.27 >More info FHY3p dark+mock Original data GEO bulk
250 6h +Pi -0.51 >More info -0.36 >More info 6h -Pi root Original data GEO bulk
251 oas-a1.1 Cd 18h 0.55 >More info 0.31 >More info Cd 18h root Root Original data GEO bulk
252 WT Root-Pi 0.66 >More info 0.20 >More info WT Root+Pi roots Original data GEO bulk
253 Wounding Stress3 h (shoot) 0.53 >More info 0.33 >More info Stress mock 3 h (shoot) Original data Stress treatments
254 Light 0.5h steady-state 0.53 >More info 0.33 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
255 Mutant lwd1_lwd2 0.74 >More info 0.12 >More info Wildtype for phy mutants Original data GEO bulk
256 Total RNA csp1 cold 0.60 >More info 0.26 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
257 seedling 24h after HZE WT 0.77 >More info 0.09 >More info seedling day 2 unirradiated WT 24h Original data
258 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.74 >More info 0.12 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
259 sid2-2 9 hpi A. brassicicola 0.64 >More info 0.22 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
260 WT-NOCO2 INFECTED 0.65 >More info 0.20 >More info WT-MOCK Original data GEO bulk
261 IAA/inhibitor A Treated 0.61 >More info 0.24 >More info IAA Treated Original data GEO bulk
262 2hr continuous KNO3 SR cell 0.57 >More info 0.28 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
263 irradiated leaf (WT 5d) 0.77 >More info 0.08 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
264 Col-0 (t-zeatin 3 h) -0.59 >More info -0.26 >More info Col-0 Original data Cytokinin treatment of seedlings
265 SHR-GR Time 1H Dex 0.66 >More info 0.18 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
266 ws 24h4c q8ws 0.51 >More info 0.33 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
267 SAM SE agl15 agl18 double mutant 0.56 >More info 0.28 >More info SAM SE Col Original data GEO bulk
268 WT H2O2 3h 0.51 >More info 0.33 >More info WT water 3h 3h_H2O2 Original data GEO bulk
269 akt1-1 0.31 >More info 0.53 >More info Ws-2 Seedlings Original data GEO bulk
270 AsAKiin11 T1 -0.72 >More info -0.12 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
271 mutant acs1A (single mutant) -0.62 >More info -0.22 >More info col control (single mutant) Original data GEO bulk
272 gh3.5-1D 48 hpi 0.70 >More info 0.14 >More info Col-0 uninoculated Original data GEO bulk
273 WT AntimycinA 3h 0.59 >More info 0.25 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
274 rdr2-1 -0.80 >More info -0.03 >More info Col-0 Original data GEO bulk
275 sicy-192 gun1-101 cotyledons 0.55 >More info 0.28 >More info WT cotyledons cotyledons Original data
276 phyB mutant 16C 4hrs 0.31 >More info 0.52 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
277 8hr-pH4.5 0.58 >More info 0.25 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
278 Col-0 WT HL 3h 0.58 >More info 0.25 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
279 gul2-1 bri1-5 mutant 0.73 >More info 0.10 >More info WT 7 day-old whole seedlings Original data
280 20m.KCl 0.22 >More info 0.61 >More info To. KCl 14 day old Roots Original data GEO bulk
281 shoot-10 μM DEX- 3 hr 0.52 >More info 0.30 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
282 Col(gl) 0mM NaCl 0.54 >More info 0.28 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
283 M6PR transgenic 100mM NaCl 0.67 >More info 0.15 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
284 CMP 4hr 0.54 >More info 0.28 >More info Acetone 4hr root Original data GEO bulk
285 myb50 xylem 0.80 >More info 0.02 >More info wt xylem xylem Original data GEO bulk
286 Col(gl) leaf 0mM NaCl 0.54 >More info 0.28 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
287 Bur-0-3h IAA 0.63 >More info 0.19 >More info Bur-0h IAA whole plant Original data GEO bulk
288 Constans-mutant -0.29 >More info -0.53 >More info Col control above-ground whole plant Original data GEO bulk
289 Light 0.5h polysome-bound 0.55 >More info 0.26 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
290 Mutant arf19-1 (IAA) -0.54 >More info -0.27 >More info Col (IAA) Original data GEO bulk
291 ckh1 CK200 0.60 >More info 0.21 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
292 ein2-1 9 hpi A. brassicicola 0.62 >More info 0.18 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
293 root Dosed gold 0.54 >More info 0.26 >More info root No gold .125 mM gold 24 h roots Original data
294 Fenclorim 4hr 0.55 >More info 0.25 >More info Acetone 4hr root Original data GEO bulk
295 0.125 mM gold 24 h 0.54 >More info 0.26 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
296 Imbibed 1 h (seed) 0.30 >More info 0.50 >More info Dry seed Original data Time course of early seed germination
297 35S:GIF -0.28 >More info -0.52 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
298 inhibitor A Treated 0.59 >More info 0.21 >More info Negative Control Original data GEO bulk
299 Mutant gh3.5-1D (AvrRpt2) 0.59 >More info 0.21 >More info Col-0 (AvrRpt2) Original data GEO bulk
300 tbf1-mock infiltration -0.58 >More info -0.22 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
301 Transgenic LEC2GR Seedling 1h Dex 0.52 >More info 0.27 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
302 Nicotinamide-61hr 0.51 >More info 0.28 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
303 Rsch 1d 0.53 >More info 0.26 >More info Rsch CA Leaves Original data
304 gun1gun5 far-red pretreated -0.52 >More info -0.27 >More info WT far-red pretreated Original data GEO bulk
305 epiF3 -0.66 >More info -0.13 >More info WT Col-0 aerial part Original data
306 K starvation (root) 0.54 >More info 0.25 >More info Ws (root) Original data GEO bulk
307 CMP 24hr 0.50 >More info 0.29 >More info Acetone 24hr root Original data GEO bulk
308 atgsnor1-3-avrB-6h 0.52 >More info 0.27 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
309 Col-0 37C 0.57 >More info 0.22 >More info Col-0 22C Original data GEO bulk
310 CLO 4mM 0.59 >More info 0.19 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
311 Kas2 roots 2hr KNO3 nitrogen 0.54 >More info 0.24 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
312 lug3 leaves 0.58 >More info 0.20 >More info WT-leaves matured rosette leaves Original data GEO bulk
313 atr mitomycin C 0.59 >More info 0.19 >More info WT mitomycin C shoot apical meristem Original data
314 pepr1-1 Pepr2-3 +Pep2 2h -0.51 >More info -0.27 >More info WT +Pep2 2h Pep2 Original data GEO bulk
315 lht1 untreated -0.53 >More info -0.25 >More info WT untreated untreated leaf Original data GEO bulk
316 Col-0-avrB-6h 0.50 >More info 0.28 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
317 arf2 brz -0.56 >More info -0.22 >More info arf2 mock Original data GEO bulk
318 Col-Luc WT 3h antimycin A 0.59 >More info 0.19 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
319 Fenclorim 24hr 0.55 >More info 0.22 >More info Acetone 24hr root Original data GEO bulk
320 SCR-GR Time 12H Dex 0.57 >More info 0.20 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
321 seedling 1.5h after HZE WT 0.59 >More info 0.18 >More info seedling day 1 unirradiated WT 1.5h Original data
322 4C 1h 0.53 >More info 0.24 >More info 22C 1h Original data GEO bulk
323 Dark 3day ivd 0.57 >More info 0.20 >More info 0h ivd Original data
324 amiRAP aerobic -0.50 >More info -0.27 >More info WT aerobic aerobic Original data GEO bulk
325 hai1-2 0.66 >More info 0.11 >More info control control whole seedlings Original data GEO bulk
326 seedling 12h after HZE atm-1 0.66 >More info 0.11 >More info seedling day 1 unirradiated atm-1 12h Original data
327 Dark 6h ivd 0.56 >More info 0.21 >More info 0h ivd Original data
328 Root -K 0.54 >More info 0.23 >More info Control-root Original data GEO bulk
329 col-5 DC3000 12h 0.55 >More info 0.22 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
330 Bur-0-1h IAA 0.65 >More info 0.12 >More info Bur-0h IAA whole plant Original data GEO bulk
331 short 12-degree- 0.54 >More info 0.22 >More info control short Original data GEO bulk
332 VND6 12h 0.59 >More info 0.17 >More info wt 12h Original data GEO bulk
333 Nicotinamide-49hr 0.52 >More info 0.24 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
334 phyABDE 4-day dark- 2 hours Rc50 0.51 >More info 0.25 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
335 ga1-3 1h GA4 -0.57 >More info -0.19 >More info ga1-3 1h water shoots Original data GEO bulk
336 pepr1-1 Pepr2-3 untreated -0.21 >More info -0.55 >More info WT untreated untreated Original data GEO bulk
337 gai MeJA 1h -0.50 >More info -0.25 >More info Laer MeJA 1h leaf discs Original data GEO bulk
338 php 0.67 >More info 0.08 >More info WT Original data GEO bulk
339 auxin and brassinazole seedlings 0.54 >More info 0.21 >More info auxin seedlings Original data GEO bulk
340 ga1-3 SCL3OE -0.54 >More info -0.21 >More info ga1-3 whole root Original data
341 abi4-102 (II) 0.61 >More info 0.13 >More info Col (II) rosette Original data GEO bulk
342 npr1-1 water -0.53 >More info -0.21 >More info Col-0 water complete seedling Original data
343 abh1 +ABA -0.60 >More info -0.14 >More info Col-0 +ABA Original data GEO bulk
344 ulp1c ulp1d 0.52 >More info 0.22 >More info col Original data GEO bulk
345 Bur-0-30min IAA 0.58 >More info 0.16 >More info Bur-0h IAA whole plant Original data GEO bulk
346 oligomycin 4 h 0.51 >More info 0.22 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
347 Sha-3h IAA -0.51 >More info -0.22 >More info Sha-0h IAA whole plant Original data GEO bulk
348 arr10 arr12 -0.64 >More info -0.09 >More info DMSO--WT DMSO roots Original data GEO bulk
349 LTN008-2 aza-dc 0.69 >More info 0.04 >More info LTN012-2 Mock Original data
350 Ts5 roots 2hr KCl control 0.63 >More info 0.09 >More info Col0 roots 2hr KCl control root Original data GEO bulk
351 +1.6 mM Tween 20 1 h. 0.59 >More info 0.13 >More info +distilled water 1 h. Original data GEO bulk
352 mbd11 mutant thaliana 10-day-old seedling 0.55 >More info 0.16 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
353 grf1/grf2/grf3 0.56 >More info 0.15 >More info WS Original data GEO bulk
354 TaFLS overexpression line (OE2) -0.56 >More info -0.15 >More info Col-0 Rosette leaves Original data
355 Col-0 Root 100 mM ATP 30 min 0.58 >More info 0.13 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
356 Nicotinamide-81hr 0.50 >More info 0.21 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
357 gir root 4%glc 0.52 >More info 0.19 >More info Col-7 root 4%glc root Original data GEO bulk
358 root hypoxia total 0.63 >More info 0.08 >More info root control total Original data GEO bulk
359 root cells epidermis 140mM NaCl 1 hour 0.52 >More info 0.19 >More info root cells epidermis standard 1 hour root cells epidermis Original data
360 SCR-GR Time 3H Dex 0.51 >More info 0.20 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
361 root longitudinal zone-2 -Fe -0.21 >More info -0.50 >More info root longitudinal zone-2 standard Original data GEO bulk
362 hira-root -0.54 >More info -0.16 >More info WT-root root Original data
363 eds16 whole leaf 7d UI 0.55 >More info 0.15 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
364 PsJN -0.54 >More info -0.16 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
365 P35S:rGRF3 0.66 >More info 0.04 >More info WS Original data GEO bulk
366 protoplasts T0 [flg22] -0.50 >More info -0.20 >More info protoplasts T0 [CPK] mesophyll protoplasts Original data GEO bulk
367 mutant acs5C (single mutant) -0.59 >More info -0.11 >More info col control (single mutant) Original data GEO bulk
368 NaCl wermyb2 0.50 >More info 0.20 >More info NaCl Col Original data GEO bulk
369 A. halleri -0.55 >More info -0.14 >More info A. thaliana mature leaves before flowering Original data GEO bulk
370 stn7-1 -0.72 >More info 0.03 >More info Col-0 rosette leaves Original data GEO bulk
371 P.p 2.5hai 0.51 >More info 0.18 >More info At-Control roots Original data GEO bulk
372 root hypoxia pPEP 0.51 >More info 0.17 >More info root hypoxia total hypoxia root Original data GEO bulk
373 vte2-1 3d vernalization 0.54 >More info 0.14 >More info WT 3d vernalization Original data GEO bulk
374 AtGATA2ox 0.56 >More info 0.12 >More info Col seedling Original data GEO bulk
375 IRP1-OE-Fe--shoot 0.60 >More info 0.08 >More info COL-0-Fe--shoot shoot Original data
376 seedlings-week-old RECA1-overexpressing
transgenic		 0.50 >More info 0.18 >More info seedlings-week-old Col-0 seedlings Original data
377 IAA7mII over-expressor IAA Treated -0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
378 Col-0 35S:MBS1 HL 3h -0.55 >More info -0.12 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
379 Laer Pst DC3000 12hpi -0.53 >More info -0.14 >More info Laer Control leaf discs Original data GEO bulk
380 root - 04% oxygen - 48h -0.17 >More info -0.50 >More info root - 21% oxygen - 48h Original data GEO bulk
381 Col-0 Mock Shade -0.52 >More info -0.14 >More info Col-0 Mock WL seedlings Original data
382 aln-1 0.50 >More info 0.16 >More info Col-0 Aerial part of seedlings Original data
383 Col-0 low oxygen 0.56 >More info 0.10 >More info Col-0 Original data GEO bulk
384 atr mock 0.50 >More info 0.16 >More info WT mock shoot apical meristem Original data
385 cpctry 0.14 >More info 0.52 >More info Col Original data GEO bulk
386 8 hr nitrate 0.56 >More info 0.09 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
387 Mutant arf2-6 -0.62 >More info -0.03 >More info Col Original data GEO bulk
388 CabpBVR2 0.51 >More info 0.14 >More info WT Original data GEO bulk
389 pnp1-1 1wk +P 0.66 >More info -0.01 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
390 vtc2 (I) 0.57 >More info 0.08 >More info Col (I) rosette Original data GEO bulk
391 Infected Col-0 leaf -0.72 >More info 0.08 >More info Mock Col-0 leaf F. oxysporum leaf Original data GEO bulk
392 pistil 0.5HAP 0.68 >More info -0.04 >More info unpollinated pistil pistil Original data GEO bulk
393 IAA 24h 0.64 >More info -0.00 >More info control 24h root Original data GEO bulk
394 CAX1/CAX3 mutant 0.51 >More info 0.13 >More info Col whole plant Original data GEO bulk
395 Dark 40min pls UV-AB 5min 0.55 >More info 0.09 >More info Dark 45 min Original data Light treatments
396 atmospheric CO2 low Mg shoot 0.50 >More info 0.14 >More info atmospheric CO2 normal Mg shoot Shoot Original data
397 Col-0 9 hpi A. brassicicola 0.56 >More info 0.07 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
398 ataf1-1 mutant Col-0 Bgh inoculated 0.63 >More info 0.00 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
399 gai Control 0.55 >More info 0.07 >More info Laer Control leaf discs Original data GEO bulk
400 dcl2-1 -0.75 >More info 0.13 >More info Col-0 Original data GEO bulk
401 pap1-D 0.52 >More info 0.10 >More info Col-0 aerial part Original data
402 root longitudinal zone-3 low sulfur -0.54 >More info -0.07 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
403 Shoot P recovery 0.55 >More info 0.06 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
404 seed germinating in countinuous light 24h SL -0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
405 P.p 6hai 0.59 >More info 0.02 >More info At-Control roots Original data GEO bulk
406 ga1-3/brm-1 0.65 >More info -0.04 >More info wt shoots Original data GEO bulk
407 Heat 6h -0.51 >More info -0.10 >More info At mock rosettes - 5 leaves stage Original data
408 E.orontii Infection 6 h -0.54 >More info -0.06 >More info Uninfection 6 h Original data Elicitor treatments
409 shoot hypoxia pCER5 0.55 >More info 0.05 >More info shoot hypoxia total Original data GEO bulk
410 WT flg22 2h 0.53 >More info 0.07 >More info WT 0h Leaf tissue Original data GEO bulk
411 wrky33 mock 0.51 >More info 0.09 >More info WT mock 14 hour mock control leaves Original data
412 SLWF infested 0.59 >More info 0.01 >More info SLWF uninfested rosette tissue Original data GEO bulk
413 roottip hypoxia total 0.54 >More info 0.05 >More info roottip control total Original data GEO bulk
414 atr zebularine 0.53 >More info 0.06 >More info WT zebularine shoot apical meristem Original data
415 vte2 leaves 48h LT 0.50 >More info 0.09 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
416 Col0 roots 2hr KNO3 nitrogen 0.03 >More info -0.62 >More info Col0 roots 2hr KCl control root Original data GEO bulk
417 gpa1-4/agb1-2 clean-air 3h 0.51 >More info 0.07 >More info Col clean-air 3h clean-air Original data GEO bulk
418 dcl3-1 -0.67 >More info 0.09 >More info Col-0 Original data GEO bulk
419 phr1 phl1 Root-Pi 0.52 >More info 0.06 >More info WT Shoot+Pi roots Original data GEO bulk
420 dde2-2 9 hpi A. brassicicola 0.63 >More info -0.05 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
421 WT 1wk -P 0.60 >More info -0.02 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
422 ubc13A-es -0.62 >More info 0.04 >More info Col-es root Original data GEO bulk
423 seedlings +5AC 0.51 >More info 0.06 >More info control seedlings 10-day old whole seedling Original data GEO bulk
424 siliques WT hypoxia 0.56 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
425 elevated CO2 high Mg root -0.50 >More info -0.07 >More info atmospheric CO2 high Mg root Root Original data
426 elevated CO2 low Mg root -0.55 >More info -0.02 >More info atmospheric CO2 low Mg root Root Original data
427 seedling 3h after HZE WT 0.54 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
428 arf2 mock 0.54 >More info 0.01 >More info Col mock Original data GEO bulk
429 msh1 albino 0.63 >More info -0.08 >More info WT aerial part Original data GEO bulk
430 CLV3n cells 0.50 >More info 0.05 >More info Protoplast Induced Original data GEO bulk
431 vtc2-1 -0.52 >More info -0.03 >More info Col-0 whole plant Original data GEO bulk
432 gpa1-4/agb1-2 ozone 2d 0.50 >More info 0.05 >More info Col ozone 2d ozone Original data GEO bulk
433 Mutant arf2 (etiol) 0.54 >More info 0.01 >More info Col (etiol) Original data GEO bulk
434 camta1 leaf water -0.52 >More info -0.03 >More info Col-0 leaf water leaf Original data GEO bulk
435 atmospheric CO2 low Mg root 0.62 >More info -0.07 >More info atmospheric CO2 normal Mg root Root Original data
436 35S::ERF104 H2O 4h 0.55 >More info -0.01 >More info Col-0 H2O 4h Original data GEO bulk
437 P.p 30hai 0.52 >More info 0.02 >More info At-Control roots Original data GEO bulk
438 Atwrky40 -0.55 >More info 0.02 >More info Col0 none leaf Original data GEO bulk
439 ARR22-ox (t-zeatin 3 h) 0.58 >More info -0.05 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
440 des1 water -0.56 >More info 0.04 >More info WT water water leaf Original data GEO bulk
441 WT cold 0.57 >More info -0.05 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
442 E.orontii Infection 3 day -0.60 >More info 0.09 >More info Uninfection 3 day Original data Elicitor treatments
443 seedling 24h after Gamma WT 0.58 >More info -0.07 >More info seedling day 2 unirradiated WT 24h Original data
444 anac017-1 AntimycinA 3h 0.52 >More info -0.01 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
445 bri1-116 -0.22 >More info 0.73 >More info Col seedling Original data GEO bulk
446 C24 24h cold -0.52 >More info 0.02 >More info Col 24h cold leaf Original data GEO bulk
447 root - 08% oxygen - 2h 0.09 >More info -0.59 >More info root - 21% oxygen - 2h Original data GEO bulk
448 Col-0 wt Hypoxic 0.57 >More info -0.07 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
449 SA Treated -0.58 >More info 0.08 >More info Water Original data GEO bulk
450 abh1 -ABA -0.54 >More info 0.05 >More info Col-0 -ABA Original data GEO bulk
451 spx1 spx2 resupplied Pi 4h -0.73 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
452 Whole root - S 72H -0.55 >More info 0.07 >More info Whole root - S 0H Original data GEO bulk
453 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
454 shoot hypoxia total 0.62 >More info -0.15 >More info shoot control total Original data GEO bulk
455 root - 04% oxygen - 2h 0.12 >More info -0.59 >More info root - 21% oxygen - 2h Original data GEO bulk
456 Col upon hypoxia 6 hrs 0.50 >More info -0.04 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
457 MYB51 OE -0.51 >More info 0.06 >More info WT for ATR1/MYB51 Original data GEO bulk
458 cop1 Seedling BL+ABA 0.52 >More info -0.09 >More info WT Seedling BL+ABA Original data GEO bulk
459 AsAKiin11 T2 -0.59 >More info 0.16 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
460 F1 whole seedlings root 0.54 >More info -0.12 >More info Col whole seedlings root Seedlings Original data GEO bulk
461 Shoot apex inflorescence (after bolting) -0.23 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
462 gpa1 -ABA LF 0.50 >More info -0.10 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
463 VND6 0h 0.56 >More info -0.17 >More info wt 0h Original data GEO bulk
464 downy mildew cotyledons late stage 0.54 >More info -0.15 >More info mock inoculated Cotyledons Original data GEO bulk
465 overexpresser LBD37 in -N 0.50 >More info -0.13 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
466 P.p 10.5hai 0.53 >More info -0.16 >More info At-Control roots Original data GEO bulk
467 WT Shoot Hypoxia 0.61 >More info -0.24 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
468 TaFLS overexpression line (OE1) -0.52 >More info 0.16 >More info Col-0 Rosette leaves Original data
469 tZ -0.50 >More info 0.14 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
470 Mock pft1 leaf 0.22 >More info -0.58 >More info Mock Col-0 leaf water leaf Original data GEO bulk
471 35S:PCO1 hypoxia -0.14 >More info 0.50 >More info WT hypoxia whole rosette Original data
472 Elevated CO2 fully expanded leaf 0.50 >More info -0.15 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
473 35S:miR396 0.58 >More info -0.23 >More info WT 0 days-old seedlings. Original data GEO bulk
474 Aerobic prt6 0.22 >More info -0.56 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
475 rsl4 -0.57 >More info 0.23 >More info Col-0 Control root Original data GEO bulk
476 Col BTH -0.34 >More info 0.67 >More info Col rosettes Original data GEO bulk
477 Apex octa 18DAS -0.54 >More info 0.22 >More info Apex Col 14DAS Original data GEO bulk
478 WT roots - Fe 0.34 >More info -0.65 >More info WT roots + Fe Roots Original data GEO bulk
479 MPK6 ox Root Hypoxia 0.53 >More info -0.27 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
480 cca1-lhy 60m light -0.24 >More info 0.50 >More info 60m light whole seedlings Original data GEO bulk
481 Chemically -0.31 >More info 0.57 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
482 MPK6 ox Shoot Hypoxia 0.62 >More info -0.37 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
483 JMJ24-IBM1 double knockout -0.52 >More info 0.28 >More info WT Original data GEO bulk
484 B.cinerea 18 h infection 0.32 >More info -0.54 >More info Mock 18 h Original data Botrytis cinerea infection
485 Botrytis cinerea 18h 0.32 >More info -0.54 >More info control 18h Original data GEO bulk
486 Whole root - S 24H -0.52 >More info 0.31 >More info Whole root - S 0H Original data GEO bulk
487 pad4-est1b-1-doublemutant 0.36 >More info -0.55 >More info pad4-mutant developed rosette leaves Original data GEO bulk
488 Whole root - S 48H -0.55 >More info 0.37 >More info Whole root - S 0H Original data GEO bulk
489 Atwrky63 -0.55 >More info 0.38 >More info Col0 none leaf Original data GEO bulk
490 ARR22-ox -0.51 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings