4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-0 ozone- (control genotype tga2 tag5 tga6)
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List of experiments correlated with "Col-0 ozone- (control genotype tga2 tag5 tga6)"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0 ozone- (control genotype tga2 tag5 tga6)		 Correlation to
Col-0 ozone- (control genotype tga2 tag5 tga6)		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0 ozone- (control genotype tga2 tag5 tga6) 1.00 >More info 1.00 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
2 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.92 >More info 0.92 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
3 Col-0 ozone 0.92 >More info 0.92 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
4 Te ozone 0.89 >More info 0.88 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
5 coi1-16 ein2 sid2 ctrl -0.90 >More info -0.87 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
6 CT101 ozone 0.88 >More info 0.88 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
7 coi1-16 ein2 sid2 ozone 0.86 >More info 0.86 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
8 C24 ozone 0.85 >More info 0.84 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
9 wrky33 Bc inoculation 14h 0.83 >More info 0.80 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
10 WT Bc inoculation 14h 0.82 >More info 0.81 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
11 WT Col-0 Bgh inoculated 0.68 >More info 0.86 >More info WT Col-0 Un-inoculated Original data GEO bulk
12 ataf1-1 mutant Col-0 Bgh inoculated 0.67 >More info 0.86 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
13 AvrRpt2 Col-0 6hpi 0.67 >More info 0.83 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
14 Col-0 9 hpi A. brassicicola 0.66 >More info 0.82 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
15 Col ozone 3h 0.62 >More info 0.86 >More info Col clean-air 3h ozone Original data GEO bulk
16 flu over-tAPX 0.62 >More info 0.84 >More info WT Col Original data GEO bulk
17 hrcC 0.64 >More info 0.81 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
18 anac017-2 AntimycinA 3h -0.63 >More info -0.82 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
19 pepr1-1 Pepr2-3 +Pep2 2h -0.63 >More info -0.81 >More info WT +Pep2 2h Pep2 Original data GEO bulk
20 col-5 hrpA 12h 0.63 >More info 0.81 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
21 hrpA 7h 0.64 >More info 0.80 >More info Mock 7h hrpA Original data GEO bulk
22 HopZ1a treated 0.64 >More info 0.80 >More info col Original data GEO bulk
23 flu 0.62 >More info 0.81 >More info WT Col Original data GEO bulk
24 GST NPP1 4 h (leaf) 0.63 >More info 0.80 >More info Mock 4 h (leaf) Original data Elicitor treatments
25 Laer Flg22 1h 0.61 >More info 0.81 >More info Laer Control leaf discs Original data GEO bulk
26 ein2-1 9 hpi A. brassicicola 0.64 >More info 0.78 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
27 Botrytis cinerea 48h 0.65 >More info 0.77 >More info control 48h Original data GEO bulk
28 hrpA fliC 7h 0.63 >More info 0.79 >More info Mock 7h hrpA fliC Original data GEO bulk
29 DFPM 0.62 >More info 0.80 >More info control Original data GEO bulk
30 Shoot -Cs 0.54 >More info 0.87 >More info Control-shoot Original data GEO bulk
31 Fenclorim 4hr 0.63 >More info 0.78 >More info Acetone 4hr root Original data GEO bulk
32 Light 3day wt -0.75 >More info -0.66 >More info 0h wt Original data
33 sid2-2 9 hpi A. brassicicola 0.66 >More info 0.75 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
34 B.cinerea 18 h infection 0.64 >More info 0.77 >More info Mock 18 h Original data Botrytis cinerea infection
35 Botrytis cinerea 18h 0.64 >More info 0.77 >More info control 18h Original data GEO bulk
36 Dark 3day ivd 0.71 >More info 0.70 >More info 0h ivd Original data
37 E.coli TUV86 2 fliC 7h 0.62 >More info 0.78 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
38 CMP 4hr 0.62 >More info 0.78 >More info Acetone 4hr root Original data GEO bulk
39 Col whole leaf 7dpi 0.60 >More info 0.80 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
40 Laer Flg22 2h 0.60 >More info 0.80 >More info Laer Control leaf discs Original data GEO bulk
41 safener treated 0.62 >More info 0.78 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
42 WT flg22 2h 0.59 >More info 0.81 >More info WT 0h Leaf tissue Original data GEO bulk
43 Laer Flg22+GA 2h 0.60 >More info 0.79 >More info Laer Control leaf discs Original data GEO bulk
44 Laer Flg22+GA 1h 0.59 >More info 0.80 >More info Laer Control leaf discs Original data GEO bulk
45 col-5 DC3000-avrRpm 4h 0.59 >More info 0.80 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
46 Cor hrpS 10h 0.60 >More info 0.79 >More info Mock 10h Cor hrpS Original data GEO bulk
47 AgNO3 3 h 0.64 >More info 0.75 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
48 col-5 DC3000 12h 0.60 >More info 0.79 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
49 E.coli 0157 H7 7h 0.60 >More info 0.78 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
50 seedlings protease IV 0.57 >More info 0.81 >More info seedlings nontreated control whole seedling Original data
51 HopZ1a treated ulp1c ulp1d 0.61 >More info 0.77 >More info col Original data GEO bulk
52 WT-SA 0.61 >More info 0.77 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
53 Col whole leaf 5dpi 0.59 >More info 0.79 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
54 35S:RPS4 eds1-2 8h -0.61 >More info -0.77 >More info 35S:RPS4 8h leaves Original data
55 IMI 4mM 0.64 >More info 0.74 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
56 35S:RPS4 eds1-2 24h -0.60 >More info -0.77 >More info 35S:RPS4 24h leaves Original data
57 35S::ERF104 Flg22 4h 0.58 >More info 0.79 >More info 35S::ERF104 H2O 4h Original data GEO bulk
58 Cor 10h 0.59 >More info 0.78 >More info Mock 10h Cor Original data GEO bulk
59 35S::PI ap3-3 35S::AP-GR +DEX 0.51 >More info 0.85 >More info 0hr DEX Original data GEO bulk
60 ceh1 mutant 0.60 >More info 0.76 >More info Parent line Original data
61 Col-Luc WT 3h antimycin A 0.60 >More info 0.76 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
62 cat2-2; 8h switch to ambient CO2 concentrations; 0.54 >More info 0.81 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
63 bak1-3 +Pep2 10h 0.59 >More info 0.76 >More info WT +Pep2 10h Pep2 Original data GEO bulk
64 S58-2 0.55 >More info 0.80 >More info wt Original data GEO bulk
65 miR393 flg22 2h 0.54 >More info 0.81 >More info WT 0h Leaf tissue Original data GEO bulk
66 WT flg22 1h 0.57 >More info 0.78 >More info WT 0h Leaf tissue Original data GEO bulk
67 efr-1 +elf18 10h -0.56 >More info -0.79 >More info WT +elf18 10h elf18 Original data GEO bulk
68 seedlings-week-old RECA1-overexpressing
transgenic		 0.57 >More info 0.78 >More info seedlings-week-old Col-0 seedlings Original data
69 Col-0-avrB-6h 0.58 >More info 0.77 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
70 Elevated CO2 AMPLE N NIGHT 0.54 >More info 0.80 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
71 cpr5npr1svi1 0.55 >More info 0.79 >More info WT(COL) Original data GEO bulk
72 Laer treat paclobutrazol (PAC) 0.56 >More info 0.78 >More info Laer Control leaf discs Original data GEO bulk
73 cpr5scv1 0.60 >More info 0.74 >More info WT(COL) Original data GEO bulk
74 Mutant siz1-3 (Drought) 0.60 >More info 0.74 >More info Col-0 (Drought) Original data GEO bulk
75 siz1-3 drought 0.60 >More info 0.74 >More info Col-0 drought Original data GEO bulk
76 CMP 24hr 0.60 >More info 0.74 >More info Acetone 24hr root Original data GEO bulk
77 mkk1/mkk2 control rep 0.60 >More info 0.74 >More info Col-0 Time 0 rep Original data GEO bulk
78 Phaseolicola 2 h (leaf) 0.53 >More info 0.80 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
79 ice1 control 0.54 >More info 0.79 >More info WT control Original data GEO bulk
80 oligomycin 4 h 0.59 >More info 0.74 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
81 rosette Dark Wounded 0.55 >More info 0.78 >More info rosette Dark Control Original data GEO bulk
82 dde2-2 9 hpi A. brassicicola 0.59 >More info 0.74 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
83 Col-0 C2H4 24h 0.59 >More info 0.74 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
84 mkk1/mkk2 24h BTH rep 0.61 >More info 0.72 >More info Col-0 24h BTH rep Original data GEO bulk
85 WT 2-4h Xanthomonas 0.54 >More info 0.78 >More info WT T0 Original data GEO bulk
86 miR393 flg22 1h 0.54 >More info 0.78 >More info WT 0h Leaf tissue Original data GEO bulk
87 WT AntimycinA 3h 0.56 >More info 0.76 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
88 SA 4mM 0.55 >More info 0.77 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
89 WT-NOCO2 INFECTED 0.59 >More info 0.73 >More info WT-MOCK Original data GEO bulk
90 Sulfometuron EC50 0.62 >More info 0.70 >More info Carrier Original data GEO bulk
91 del1-1 mutant 5d uninfected 0.59 >More info 0.72 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
92 P.p 10.5hai 0.54 >More info 0.77 >More info At-Control roots Original data GEO bulk
93 mil4 BTH 0.58 >More info 0.73 >More info Col BTH rosettes Original data GEO bulk
94 AFB1 flg22 2h 0.57 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
95 WT 3h -P 0.55 >More info 0.76 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
96 mpk6-ko Flg22 4h 0.51 >More info 0.80 >More info mpk6-ko H2O 4h Original data GEO bulk
97 GO5; 8h switch to ambient CO2 concentrations; 0.57 >More info 0.74 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
98 +1.6 mM Tween 20 1 h. 0.46 >More info 0.85 >More info +distilled water 1 h. Original data GEO bulk
99 CLO 4mM 0.55 >More info 0.75 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
100 P.p 6hai 0.56 >More info 0.74 >More info At-Control roots Original data GEO bulk
101 pad4-PsmES4326-24hpi -0.56 >More info -0.74 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
102 pmr5 pmr6 0.54 >More info 0.76 >More info Col-0 Original data GEO bulk
103 ice1 6H Cold 0.54 >More info 0.76 >More info WT 6H Cold Original data GEO bulk
104 rosette Light Wounded 0.55 >More info 0.75 >More info rosette Light Control Original data GEO bulk
105 Flagellin 4 h (leaf) 0.55 >More info 0.75 >More info Mock 4 h (leaf) Original data Elicitor treatments
106 sid2-1 cold -0.53 >More info -0.77 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
107 P.p 30hai 0.53 >More info 0.77 >More info At-Control roots Original data GEO bulk
108 AFB1 flg22 1h 0.55 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
109 DC3000 2 h (leaf) 0.52 >More info 0.77 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
110 Lipopolysaccaride4 h (leaf) 0.51 >More info 0.78 >More info Mock 4 h (leaf) Original data Elicitor treatments
111 CMV-WT 0.54 >More info 0.74 >More info Mock-At Aerial tissues Original data GEO bulk
112 GST 4 h (leaf) 0.47 >More info 0.81 >More info Mock 4 h (leaf) Original data Elicitor treatments
113 Leafminer locally damaged thaliana seedlings 0.58 >More info 0.70 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
114 Primisulfuron EC50 0.57 >More info 0.70 >More info Carrier (primisulfuron) Original data GEO bulk
115 pnp1-1 3h +P 0.62 >More info 0.65 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
116 cpr5npr1 0.55 >More info 0.72 >More info WT(COL) Original data GEO bulk
117 gh3.5-1D 48 hpi 0.56 >More info 0.71 >More info Col-0 uninoculated Original data GEO bulk
118 Elevated CO2 AMPLE N DAY 0.54 >More info 0.73 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
119 ulp1c ulp1d +Pto 0.52 >More info 0.75 >More info ulp1c ulp1d mock Original data GEO bulk
120 WT powdery mildew 0.56 >More info 0.71 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
121 petiole in D 0.51 >More info 0.76 >More info petiole in WL petioles Original data GEO bulk
122 edr1 18 h powdery mildew 0.58 >More info 0.69 >More info Col-0 18 h powdery mildew Original data GEO bulk
123 mkk2 24h BTH rep 0.52 >More info 0.74 >More info Col-0 24h BTH rep Original data GEO bulk
124 Col-0 under 4 days salt 0.58 >More info 0.68 >More info Col-0 under control 4 days salt treatment rosette Original data
125 shoots bhlh100/101 0uM Fe 0.55 >More info 0.71 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
126 WT+H2O2 0.50 >More info 0.76 >More info WT H2O2 Original data GEO bulk
127 vtc2 (I) 0.55 >More info 0.71 >More info Col (I) rosette Original data GEO bulk
128 cpr5 0.56 >More info 0.70 >More info WT seedling Original data GEO bulk
129 Col0-PsmES4326-24hpi 0.65 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
130 Chitosan 3h Treatment 0.58 >More info 0.68 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
131 erf104-ko Flg22 4h 0.46 >More info 0.80 >More info erf104-ko H2O 4h Original data GEO bulk
132 msh1 albino 0.57 >More info 0.69 >More info WT aerial part Original data GEO bulk
133 npr1-1 SA -0.56 >More info -0.69 >More info Col-0 SA complete seedling Original data
134 Seedling KUA1-IOX est 0.55 >More info 0.70 >More info Seedling KUA1-IOX mock Original data
135 WT +elf18 10h 0.56 >More info 0.69 >More info WT untreated elf18 Original data GEO bulk
136 col-5 hrpA 2h 0.50 >More info 0.75 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
137 Col-0 flu HL 3h 0.54 >More info 0.71 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
138 UV Stress 24 h (shoot) 0.50 >More info 0.75 >More info Stress mock 24 h (shoot) Original data Stress treatments
139 gai Control 0.55 >More info 0.70 >More info Laer Control leaf discs Original data GEO bulk
140 TNT-seedlings 0.53 >More info 0.72 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
141 ARR22-ox (t-zeatin 3 h) 0.62 >More info 0.63 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
142 pmr5 0.49 >More info 0.76 >More info Col-0 Original data GEO bulk
143 Pto inoculated 0.56 >More info 0.68 >More info col Original data GEO bulk
144 WT +elf18 2h 0.51 >More info 0.73 >More info WT untreated elf18 Original data GEO bulk
145 AvrRpm1 2 h (leaf) 0.51 >More info 0.73 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
146 P.p 2.5hai 0.52 >More info 0.72 >More info At-Control roots Original data GEO bulk
147 Mutant siz1-3 0.55 >More info 0.69 >More info Col-0 Original data GEO bulk
148 root Dosed gold 0.55 >More info 0.69 >More info root No gold .125 mM gold 24 h roots Original data
149 WT NAA/flg 1h 0.51 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
150 siz1-3 control 0.55 >More info 0.69 >More info Col-0 control Original data GEO bulk
151 0.125 mM gold 24 h 0.55 >More info 0.69 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
152 aba3-1 0.47 >More info 0.77 >More info wt Original data GEO bulk
153 pepr1-1 Pepr2-3 +Pep2 10h -0.50 >More info -0.73 >More info WT +Pep2 10h Pep2 Original data GEO bulk
154 smg7b-1 0.53 >More info 0.70 >More info WT whole plant Original data GEO bulk
155 pvip1 pvip2 0.53 >More info 0.70 >More info Col-0 whole rosettes Original data GEO bulk
156 ice1 3H Cold 0.54 >More info 0.68 >More info WT 3H Cold Original data GEO bulk
157 Col leaves 48h LT 0.54 >More info 0.68 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
158 Pst-DC3000(avrRpm1)-4hpi 0.52 >More info 0.70 >More info Pst-DC3000-4hpi Original data GEO bulk
159 camta1/2/3 warm 0.53 >More info 0.69 >More info WT warm entire aerial part Original data GEO bulk
160 S15-118 0.51 >More info 0.71 >More info wt Original data GEO bulk
161 penta Alternaria 3dpi 0.59 >More info 0.63 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
162 SLWF infested 0.51 >More info 0.71 >More info SLWF uninfested rosette tissue Original data GEO bulk
163 bio4-1 mutant leaves 0.44 >More info 0.78 >More info WT leaves leaves Original data GEO bulk
164 Mutant gh3.5-1D (AvrRpt2) 0.51 >More info 0.70 >More info Col-0 (AvrRpt2) Original data GEO bulk
165 WT roots - Fe 0.51 >More info 0.70 >More info WT roots + Fe Roots Original data GEO bulk
166 8h-DC3000 avrRpm1 0.53 >More info 0.68 >More info 8h-DC3000 leaves Original data GEO bulk
167 edr1 36 h powdery mildew 0.49 >More info 0.72 >More info Col-0 36 h powdery mildew Original data GEO bulk
168 DC3000 7h 0.47 >More info 0.74 >More info Mock 7h DC3000 Original data GEO bulk
169 toc1-1-49hr 0.54 >More info 0.66 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
170 Leaf GLU1-KO 0.54 >More info 0.66 >More info Leaf Col(0) rosette leaves Original data GEO bulk
171 Triazolopyrimidine EC50 0.55 >More info 0.65 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
172 Dex-rga(delta17) 4h GA4+DEX -0.50 >More info -0.70 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
173 leaf blade in D 0.44 >More info 0.76 >More info leaf blade in WL leaf blades Original data GEO bulk
174 ERF96OE 0.48 >More info 0.72 >More info WT leaf Original data
175 abi4 vtc2 (I) 0.50 >More info 0.69 >More info Col (I) rosette Original data GEO bulk
176 Cycloheximide 3 h 0.46 >More info 0.73 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
177 cs26 long day 0.49 >More info 0.70 >More info Leaves-WT-LD leaf Original data GEO bulk
178 Laer pretreat GA+JA Flg22 0h 0.54 >More info 0.64 >More info Laer pretreat water control leaf discs Original data GEO bulk
179 cpr5 0.50 >More info 0.68 >More info WT(COL) Original data GEO bulk
180 Cor 24h 0.51 >More info 0.67 >More info Mock 24h Cor Original data GEO bulk
181 Col-0 low oxygen 0.51 >More info 0.67 >More info Col-0 Original data GEO bulk
182 Atss3 Light4 -0.49 >More info -0.69 >More info Atss3 Dark0.5 Original data GEO bulk
183 UV 0.55 >More info 0.62 >More info WT aerial region Original data GEO bulk
184 Laer pretreat GA Flg22 1h 0.46 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
185 chito-octamer 0.45 >More info 0.72 >More info Col Mock Original data GEO bulk
186 chito-tetramer 0.47 >More info 0.70 >More info Col Mock Original data GEO bulk
187 scrm-D 0.55 >More info 0.61 >More info Col-0 WT whole seedling Original data GEO bulk
188 R. solani AG8 0.52 >More info 0.64 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
189 WT+chitooctaose 0.41 >More info 0.75 >More info WT+water chitooctaose seedlings Original data GEO bulk
190 sni1 0.44 >More info 0.72 >More info WT Original data GEO bulk
191 Laer pretreat JA Flg22 1h 0.53 >More info 0.62 >More info Laer pretreat water control leaf discs Original data GEO bulk
192 ice1 24H Cold 0.50 >More info 0.65 >More info WT 24H Cold Original data GEO bulk
193 pnp1-1 1wk -P 0.54 >More info 0.61 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
194 anac017-1 H2O2 3h -0.52 >More info -0.63 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
195 Got7 UV 0.42 >More info 0.73 >More info Got7 mock UV seedling Original data
196 eds16 whole leaf 5dpi -0.46 >More info -0.69 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
197 RPL18 TuMV inoculated total RNA 0.47 >More info 0.68 >More info mock inoculated total RNA PO Original data GEO bulk
198 camta2/3 warm 0.48 >More info 0.67 >More info WT warm entire aerial part Original data GEO bulk
199 A. thaliana-A. lyrata hybrid -0.42 >More info -0.73 >More info A. thaliana mature leaves before flowering Original data GEO bulk
200 Elevated CO2 fully expanded leaf 0.55 >More info 0.59 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
201 Leafminer damaged seedlings 0.58 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
202 PAHs stress 0.51 >More info 0.63 >More info exp control phenanthrene whole plants Original data GEO bulk
203 DC3000 24h 0.51 >More info 0.63 >More info Mock 24h DC3000 Original data GEO bulk
204 camta1/3 warm 0.47 >More info 0.67 >More info WT warm entire aerial part Original data GEO bulk
205 WT cold 0.49 >More info 0.65 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
206 Dex-rga(delta17) 2h GA4+DEX -0.48 >More info -0.66 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
207 LTN008-2 aza-dc 0.57 >More info 0.57 >More info LTN012-2 Mock Original data
208 Ba1 UV 0.50 >More info 0.63 >More info Ba1 mock UV seedling Original data
209 Mutant coi1(leaf) -0.48 >More info -0.65 >More info Col-0 (leaf) Original data GEO bulk
210 vte2-1 3d vernalization 0.48 >More info 0.65 >More info WT 3d vernalization Original data GEO bulk
211 Osmotic Stress 24 h (shoot) 0.52 >More info 0.60 >More info Stress mock 24 h (shoot) Original data Stress treatments
212 pho1 0.51 >More info 0.61 >More info Col2WT Original data GEO bulk
213 P.syringae AvrRpt2 4 h (leaf) 0.51 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
214 Shoot -K 0.51 >More info 0.61 >More info Control-shoot Original data GEO bulk
215 K starvation (shoot) 0.51 >More info 0.61 >More info Ws (shoot) Original data GEO bulk
216 gpa1 -ABA GC -0.39 >More info -0.73 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
217 WT chitooctaose 0.45 >More info 0.67 >More info WT water Original data GEO bulk
218 OH1 0.43 >More info 0.69 >More info Col-0 leaves Original data GEO bulk
219 vtc1 (II) 0.46 >More info 0.65 >More info Col (II) rosette Original data GEO bulk
220 Col-0 V. longisporum-inoculated 48 hpi 0.44 >More info 0.67 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
221 Mature callus 0.54 >More info 0.57 >More info Young callus hypocotyls Original data GEO bulk
222 Dark 6h ivd 0.50 >More info 0.61 >More info 0h ivd Original data
223 toc1-1-53hr 0.58 >More info 0.53 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
224 Mutant arf2 (etiol) 0.49 >More info 0.62 >More info Col (etiol) Original data GEO bulk
225 arf2 mock 0.49 >More info 0.62 >More info Col mock Original data GEO bulk
226 aerial organ callus inducing medium 12 h 0.42 >More info 0.69 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
227 Imidazolinone EC50 0.50 >More info 0.60 >More info Carrier (Imidazolinone) Original data GEO bulk
228 5-Triiodobenzoic acid3 h 0.52 >More info 0.58 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
229 Laer pretreat JA Flg22 2h 0.54 >More info 0.56 >More info Laer pretreat water control leaf discs Original data GEO bulk
230 atr mock 0.55 >More info 0.55 >More info WT mock shoot apical meristem Original data
231 WT NAA/flg 2h 0.44 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
232 RPL18 TuMV inoculated polysomal RNA 0.45 >More info 0.65 >More info mock inoculated polysomal RNA PO Original data GEO bulk
233 6h +Pi -0.48 >More info -0.62 >More info 6h -Pi root Original data GEO bulk
234 wavy 0.47 >More info 0.63 >More info WT Original data GEO bulk
235 Col ozone 2d 0.40 >More info 0.70 >More info Col clean-air 2d ozone Original data GEO bulk
236 col-5 hrpA 4h 0.38 >More info 0.72 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
237 gun1gun5 far-red pretreated -0.41 >More info -0.69 >More info WT far-red pretreated Original data GEO bulk
238 Mutant ein2(leaf) -0.42 >More info -0.67 >More info Col-0 (leaf) Original data GEO bulk
239 Col-0 INA 48h 0.45 >More info 0.64 >More info Col-0 MOCK 48h Original data GEO bulk
240 R. solani AG2-1 0.51 >More info 0.58 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
241 WT 30μM arsenate 8 hours. 0.51 >More info 0.58 >More info WT control (not supplemented). Original data
242 ataf1-1 mutant Col-0 Un-inoculated -0.48 >More info -0.61 >More info WT Col-0 Un-inoculated Original data GEO bulk
243 gpa1 +ABA GC -0.39 >More info -0.70 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
244 aerial organ callus inducing medium 48 h 0.49 >More info 0.60 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
245 abh1 -ABA 0.39 >More info 0.70 >More info Col-0 -ABA Original data GEO bulk
246 tt4 0.40 >More info 0.69 >More info Col-0 aerial part Original data
247 atr zebularine 0.56 >More info 0.52 >More info WT zebularine shoot apical meristem Original data
248 atmospheric CO2 low Mg shoot 0.51 >More info 0.57 >More info atmospheric CO2 normal Mg shoot Shoot Original data
249 Col-0 Flg22 4h 0.40 >More info 0.68 >More info Col-0 H2O 4h Original data GEO bulk
250 oas-a1.1 Cd 18h 0.37 >More info 0.71 >More info Cd 18h root Root Original data GEO bulk
251 sid2 -0.45 >More info -0.63 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
252 rcf1-1 cold 24h 0.46 >More info 0.62 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
253 MIL4 ox BTH 0.46 >More info 0.62 >More info Col BTH Original data GEO bulk
254 camta3-1 0.39 >More info 0.68 >More info WT Original data GEO bulk
255 npr1-3 DCA 48h 0.40 >More info 0.67 >More info npr1-3 MOCK 48h Original data GEO bulk
256 8hr-pH4.5 0.46 >More info 0.61 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
257 Cd 24h root -0.43 >More info -0.64 >More info WT-Untreated Shoot Original data GEO bulk
258 Nicotinamide-53hr 0.43 >More info 0.64 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
259 Shoot submergence 24h 0.40 >More info 0.67 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
260 camta1/2/3 24h cold 0.41 >More info 0.66 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
261 1 h Light IP RNA -0.37 >More info -0.70 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
262 Laer pretreat GA Flg22 0h 0.53 >More info 0.53 >More info Laer pretreat water control leaf discs Original data GEO bulk
263 Laer pretreat GA+JA Flg22 1h 0.50 >More info 0.56 >More info Laer pretreat water control leaf discs Original data GEO bulk
264 Col whole leaf amplified 5 dpi 0.37 >More info 0.69 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
265 D2O 0.49 >More info 0.57 >More info H2O seedling Original data GEO bulk
266 Fenclorim 24hr 0.44 >More info 0.62 >More info Acetone 24hr root Original data GEO bulk
267 OE WRKY63.3 high light 0.37 >More info 0.69 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
268 Col-0 48 hpi 0.45 >More info 0.61 >More info Col-0 uninoculated Original data GEO bulk
269 leaf13 0.45 >More info 0.61 >More info unwounded leaves none Original data GEO bulk
270 IRP1-OE-Fe--shoot 0.48 >More info 0.58 >More info COL-0-Fe--shoot shoot Original data
271 mbd6 mutant thaliana 10-day-old seedling 0.44 >More info 0.62 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
272 pnp1-1 1wk +P 0.52 >More info 0.53 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
273 plant (tga2-5-6) 4h phytoprostane A1 0.51 >More info 0.54 >More info plant (tga2-5-6) 4h control Original data GEO bulk
274 ABA DFPM 0.51 >More info 0.54 >More info control Original data GEO bulk
275 Wounding Stress3 h (shoot) 0.44 >More info 0.61 >More info Stress mock 3 h (shoot) Original data Stress treatments
276 inhibitor A Treated 0.39 >More info 0.66 >More info Negative Control Original data GEO bulk
277 Heat shock optimum 0.40 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
278 sta1 0.45 >More info 0.60 >More info WT Original data GEO bulk
279 Hydrogen Peroxide 500 uM 0.39 >More info 0.66 >More info Control RB and PER Hydrogen Peroxide Original data
280 ACC 3 h 0.37 >More info 0.67 >More info Mock 3 h Original data Basic hormone treatment of seedlings
281 tunicamycin -0.44 >More info -0.60 >More info DMF Original data GEO bulk
282 Col(gl) leaf 0mM NaCl 0.43 >More info 0.61 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
283 miR393 0h -0.39 >More info -0.65 >More info WT 0h Leaf tissue Original data GEO bulk
284 Nicotinamide-73hr 0.42 >More info 0.62 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
285 npr1 sni1 brca2a SA -0.38 >More info -0.66 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
286 Col(gl) 0mM NaCl 0.43 >More info 0.61 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
287 aerial organ callus inducing medium 96 h 0.42 >More info 0.62 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
288 aerial organ callus inducing medium 24h 0.40 >More info 0.64 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
289 1 h Light Total RNA -0.36 >More info -0.68 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
290 nia1nia2 0.48 >More info 0.56 >More info Col-0 whole seedlings Original data GEO bulk
291 mbd4 mutant thaliana 10-day-old seedling 0.43 >More info 0.61 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
292 del1-1 5dpi 0.50 >More info 0.53 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
293 toc1-1-77hr 0.61 >More info 0.42 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
294 Phytoprostane A1 4 h 0.48 >More info 0.55 >More info Col-0 Original data GEO bulk
295 rosette leaves fdh 0.44 >More info 0.59 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
296 coi1-2 0.39 >More info 0.64 >More info Col-0 mock Whole seedling Original data GEO bulk
297 (Col-0)+100 uM As 0.42 >More info 0.61 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
298 smg5-2 0.44 >More info 0.59 >More info WT whole plant Original data GEO bulk
299 Col-0 DCA 48h 0.36 >More info 0.66 >More info Col-0 MOCK 48h Original data GEO bulk
300 WT in -N 0.43 >More info 0.59 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
301 atgsnor1-1 -0.41 >More info -0.61 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
302 Nicotinamide-69hr 0.37 >More info 0.65 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
303 JA 0.42 >More info 0.60 >More info Col-0 mock Whole seedling Original data GEO bulk
304 OsSAP11 expressing -0.39 >More info -0.63 >More info WT seedlings Original data GEO bulk
305 4d red light grown hmr-5 seedlings 0.43 >More info 0.59 >More info 4d red light grown WT(Col-0) seedlings Original data
306 CeO2 germinant -0.30 >More info -0.72 >More info Millipore Water germinant CeO2 seedling Original data
307 Cocultivation 8 hrs root 0.47 >More info 0.55 >More info Mock cocultivation 8 hrs root Root Original data
308 PNO8 3 h 0.43 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
309 CAX1/CAX3 mutant 0.41 >More info 0.60 >More info Col whole plant Original data GEO bulk
310 col-5 DC3000 4h 0.27 >More info 0.74 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
311 ani1 T0.5 -0.35 >More info -0.66 >More info WT T0.5 root tissue Original data GEO bulk
312 35S:RPS4 eds1-2 2h -0.34 >More info -0.67 >More info 35S:RPS4 2h leaves Original data
313 ein5-1 ski2-3 0.43 >More info 0.57 >More info Col-0 aerial tissue Original data
314 Col leaf 100mM NaCl 0.42 >More info 0.58 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
315 Laer pretreat GA+JA Flg22 2h 0.47 >More info 0.53 >More info Laer pretreat water control leaf discs Original data GEO bulk
316 Col leaf 100mM NaCl 0.42 >More info 0.58 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
317 Col 100mM NaCl 0.42 >More info 0.58 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
318 myb3 myb3r4d 0.37 >More info 0.63 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
319 (Col-0)+200 uM As 0.41 >More info 0.59 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
320 20d after anthesis 0.47 >More info 0.53 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
321 Col BTH 0.33 >More info 0.67 >More info Col rosettes Original data GEO bulk
322 Col-0 SA 0.50 >More info 0.49 >More info Col-0 Original data GEO bulk
323 aba2 1% sucrose 12-day-old 0.43 >More info 0.56 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
324 Col whole leaf 3dpi 0.37 >More info 0.62 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
325 leaf rlt1-1rlt2-1 -0.40 >More info -0.59 >More info leaf Col-0 leaf Original data GEO bulk
326 35S:VND7-VP16-GR+CHX 0.36 >More info 0.63 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
327 M6PR transgenic 0mM NaCl 0.41 >More info 0.58 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
328 rao2 H2O2 3h -0.42 >More info -0.57 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
329 bHLH122 ox -0.37 >More info -0.62 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
330 sfr3 cold 0.39 >More info 0.60 >More info WT cold All aerial tissue Original data GEO bulk
331 Glyphosate EC50 0.49 >More info 0.50 >More info Carrier (Glyphosate) Original data GEO bulk
332 NJ15 0.28 >More info 0.71 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
333 SCR-GR Time 1H Dex 0.44 >More info 0.54 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
334 cs26 short-day -0.41 >More info -0.57 >More info Leaves-WT-SD leaf Original data GEO bulk
335 upf3 0.40 >More info 0.58 >More info WT whole plant Original data GEO bulk
336 npr1 sni1 SA 0.40 >More info 0.58 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
337 oligomycin 1 h 0.36 >More info 0.62 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
338 WT H2O2 3h 0.38 >More info 0.60 >More info WT water 3h 3h_H2O2 Original data GEO bulk
339 INA 0.36 >More info 0.62 >More info CK INA seedling Original data
340 atmospheric CO2 high Mg shoot 0.44 >More info 0.53 >More info atmospheric CO2 normal Mg shoot Shoot Original data
341 WT 1wk -P 0.47 >More info 0.50 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
342 ein2-PsmES4326-24hpi -0.41 >More info -0.56 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
343 lht1 PstDC3000 48h 0.41 >More info 0.56 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
344 toc1-1-57hr 0.47 >More info 0.50 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
345 PBZ 0.47 >More info 0.50 >More info none PBZ Rosette Original data GEO bulk
346 low CO2 + light 0.43 >More info 0.54 >More info normal CO2 + light Original data GEO bulk
347 GSH 0.39 >More info 0.58 >More info control GSH treated seedlings Original data GEO bulk
348 9 hr Hypoxia 1 hr recovery IP RNA 0.41 >More info 0.56 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
349 sav1-1 light 0.41 >More info 0.56 >More info Col-0 light seedlings Original data GEO bulk
350 WT seedlings MV 0.37 >More info 0.60 >More info WT seedlings control Seedlings Original data GEO bulk
351 Seedling-HeatStressed TOTALmRNA 0.38 >More info 0.59 >More info Seedling-control TOTALmRNA seedling Original data
352 Nicotinamide-49hr 0.40 >More info 0.56 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
353 dor drought 0.44 >More info 0.52 >More info WT drought Original data GEO bulk
354 rosette leaves lcr 0.36 >More info 0.60 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
355 Col whole leaf 5 dpi 0.31 >More info 0.65 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
356 M6PR transgenic leaf 0mM NaCl 0.38 >More info 0.58 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
357 gpa1 -ABA LF 0.43 >More info 0.53 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
358 agb1 gpa1 -ABA GC -0.29 >More info -0.67 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
359 MPK6 ox Shoot Hypoxia 0.43 >More info 0.53 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
360 rao1-1 3h antimycin A -0.43 >More info -0.53 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
361 Cold Stress 24 h (shoot) 0.43 >More info 0.52 >More info Stress mock 24 h (shoot) Original data Stress treatments
362 DC3000 hrcC 2 h (leaf) 0.31 >More info 0.64 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
363 Selenate (root) 0.37 >More info 0.58 >More info Ws (root) Original data GEO bulk
364 RGA-GR-DEX 0.30 >More info 0.65 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
365 cell culture 4 h phytoprostane A1 0.34 >More info 0.61 >More info cell culture 4 h control Original data GEO bulk
366 Stem tissue 5 days NAA 0.33 >More info 0.62 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
367 ckh1 CK200 0.38 >More info 0.57 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
368 Root Selenate 0.37 >More info 0.58 >More info Root control 40 micromolar selenate Root Original data GEO bulk
369 pap1-D/tt4 0.37 >More info 0.58 >More info Col-0 aerial part Original data
370 Uniconazole 12 h 0.40 >More info 0.54 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
371 9 hr Hypoxia IP RNA 0.40 >More info 0.54 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
372 E.orontii Infection 3 day 0.22 >More info 0.72 >More info Uninfection 3 day Original data Elicitor treatments
373 camta3-2 0.35 >More info 0.59 >More info WT Original data GEO bulk
374 arf2 brz -0.42 >More info -0.52 >More info arf2 mock Original data GEO bulk
375 atgsnor1-3-avrB-6h 0.44 >More info 0.50 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
376 Shoot dark control 7h 0.31 >More info 0.63 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
377 Whole root - low pH 12H 0.34 >More info 0.60 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
378 tor mutant glucose 0.43 >More info 0.51 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
379 csn5 (csn5a-2 csn5b) light 0.42 >More info 0.52 >More info WT light Original data GEO bulk
380 vte2 leaves 48h LT 0.44 >More info 0.50 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
381 Elevated CO2 expanding leaf 0.36 >More info 0.58 >More info Ambient CO2 expanding leaf expanding leaf Original data
382 Col laser microdissected 5 dpi 0.26 >More info 0.67 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
383 bZIP1ko mutant N+Light- 0.38 >More info 0.55 >More info WT-sib N+Light- whole plant Original data GEO bulk
384 Truncated AC2 T2 -0.50 >More info -0.43 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
385 WT +Pep2 2h 0.58 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
386 Salt Stress 24 h (root) 0.42 >More info 0.51 >More info Stress mock 24 h (root) Original data Stress treatments
387 protoplasts T2 [flg22] 0.29 >More info 0.64 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
388 gpa1-4/agb1-2 ozone 2d -0.34 >More info -0.59 >More info Col ozone 2d ozone Original data GEO bulk
389 Col 3d 0.32 >More info 0.61 >More info Col CA Leaves Original data
390 aox1a(line) MLD stressed 0.43 >More info 0.50 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
391 npr1-PsmES4326-24hpi -0.36 >More info -0.56 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
392 Nicotinamide-93hr 0.39 >More info 0.53 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
393 Nicotinamide-81hr 0.40 >More info 0.52 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
394 rcf1-1 cold 0h 0.36 >More info 0.56 >More info WT cold 0h Control seedlings Original data GEO bulk
395 sfr2 control -0.36 >More info -0.56 >More info WT control All aerial tissue Original data GEO bulk
396 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.39 >More info 0.53 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
397 Rose Bengal 0.5 uM 0.28 >More info 0.64 >More info Control RB and PER Rose Bengal Original data
398 til1-1 22C 0.35 >More info 0.57 >More info Col-0 22C Original data GEO bulk
399 eto1-4 0.32 >More info 0.60 >More info Col-0 whole seedling Original data GEO bulk
400 Col-0 low oxygen 0.34 >More info 0.58 >More info Col-0 control low oxygen root Original data GEO bulk
401 S14-150 0.35 >More info 0.57 >More info wt Original data GEO bulk
402 AtLysM RLK1 mutant chitooctaose -0.35 >More info -0.57 >More info WT chitooctaose Original data GEO bulk
403 WT no Pi 0.41 >More info 0.51 >More info WT complete seedlings Original data
404 Time-0 chr11-1chr17-1 -0.41 >More info -0.51 >More info Time-0 Col-0 leaf explants Original data
405 Methyl Jasmonate 1 h 0.37 >More info 0.54 >More info Mock 1 h Original data Basic hormone treatment of seedlings
406 phr1 phl1 Root-Pi 0.39 >More info 0.52 >More info WT Shoot+Pi roots Original data GEO bulk
407 clf-28 swn-7 0.40 >More info 0.51 >More info Col whole plant Original data GEO bulk
408 Col upon hypoxia 6 hrs 0.39 >More info 0.52 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
409 GA 0.24 >More info 0.67 >More info none GA Rosette Original data GEO bulk
410 rcf1-1 cold 12h 0.40 >More info 0.51 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
411 9 hr Hypoxia 1 hr recovery Total RNA 0.36 >More info 0.55 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
412 Leafminer systemically damaged thaliana seedlings 0.37 >More info 0.54 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
413 AsAKiin11 T2 0.25 >More info 0.66 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
414 Laer Alternaria 3dpi -0.34 >More info -0.57 >More info Laer Control leaf discs Original data GEO bulk
415 root protoplasts 40 mM NaCl 0.33 >More info 0.58 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
416 fls1-3 0.34 >More info 0.57 >More info Col-0 Rosette leaves Original data
417 Nicotinamide-57hr 0.35 >More info 0.55 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
418 9m.KNO3 0.27 >More info 0.63 >More info To. KNO3 14 day old Roots Original data GEO bulk
419 ced1 -0.40 >More info -0.50 >More info WT PEG 6hr seedlings Original data GEO bulk
420 Seedling-HeatStressed POLYSOMESmRNA 0.36 >More info 0.54 >More info Seedling-control POLYSOMESmRNA seedling Original data
421 bio4-1 mutant watered00µM biotin leaves -0.29 >More info -0.61 >More info bio4-1 mutant leaves leaves Original data GEO bulk
422 Rsch 1d 0.33 >More info 0.57 >More info Rsch CA Leaves Original data
423 Rsch 3d 0.33 >More info 0.56 >More info Rsch CA Leaves Original data
424 Dark 4 h pls RedLight 1min -0.25 >More info -0.64 >More info Dark 4 h Original data Light treatments
425 Ws leaf 100mM NaCl 0.35 >More info 0.54 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
426 ppi2 0.37 >More info 0.52 >More info WT whole plant Original data GEO bulk
427 9m.KCl 0.26 >More info 0.63 >More info To. KCl 14 day old Roots Original data GEO bulk
428 hst5 0.35 >More info 0.54 >More info Col-0 Original data GEO bulk
429 Ws 100mM NaCl 0.35 >More info 0.54 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
430 Compost 0.37 >More info 0.52 >More info Perlite Compost Original data GEO bulk
431 rpoTmp(line) MLD stressed 0.37 >More info 0.52 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
432 C24 UV1 -0.60 >More info -0.29 >More info C24 mock UV seedling Original data
433 0h hml 0.52 >More info 0.36 >More info 0h wt Original data
434 Bur-0-3h IAA 0.37 >More info 0.51 >More info Bur-0h IAA whole plant Original data GEO bulk
435 dense canopy 0.28 >More info 0.60 >More info single (control) petiole Original data GEO bulk
436 eds16 whole leaf 6hpi -0.29 >More info -0.59 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
437 ORS1 induced 0.31 >More info 0.56 >More info mock-induced rosette leaves Original data GEO bulk
438 Norflurazon 0.27 >More info 0.60 >More info Col-0 Original data GEO bulk
439 Nicotinamide-65hr 0.37 >More info 0.50 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
440 Norflurazon 0.27 >More info 0.60 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
441 rGRF 0.25 >More info 0.62 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
442 Col-0 norflurazon 0.26 >More info 0.60 >More info Col-0 control Original data GEO bulk
443 leaf blade in FRD 0.27 >More info 0.59 >More info leaf blade in WL leaf blades Original data GEO bulk
444 Light 0.26 >More info 0.60 >More info Control Original data GEO bulk
445 pmr5 0.22 >More info 0.64 >More info Col-0 rosette Original data GEO bulk
446 Dex-rga(delta17) 4h GA4 -0.24 >More info -0.62 >More info Vector 4h GA4 shoots Original data GEO bulk
447 WT 90-105 min Xanthomonas 0.25 >More info 0.61 >More info WT T0 Original data GEO bulk
448 rsa3-1 Na 24h 0.29 >More info 0.57 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
449 gh3.5D uninoculated -0.31 >More info -0.54 >More info Col-0 48 hpi Original data GEO bulk
450 IRP1-OE-Ctrl--root 0.29 >More info 0.56 >More info COL-0-Ctrl--root root Original data
451 Te 1d 0.33 >More info 0.52 >More info Te CA Leaves Original data
452 Rsch 8h 0.30 >More info 0.55 >More info Rsch CA Leaves Original data
453 IAA/inhibitor A Treated 0.28 >More info 0.57 >More info IAA Treated Original data GEO bulk
454 15m.KCl 0.23 >More info 0.62 >More info To. KCl 14 day old Roots Original data GEO bulk
455 TA induced 0.30 >More info 0.54 >More info Methanol TA Suspension cells Original data GEO bulk
456 oas-a1.1 Cd 24h 0.31 >More info 0.53 >More info Cd 24h root Shoot Original data GEO bulk
457 abi4-102 (II) 0.31 >More info 0.53 >More info Col (II) rosette Original data GEO bulk
458 WT light -0.32 >More info -0.52 >More info WT dark Original data GEO bulk
459 MYB12OX/tt4 0.29 >More info 0.55 >More info Col-0 aerial part Original data
460 hira-root -0.33 >More info -0.51 >More info WT-root root Original data
461 Col in Pi deficiency medium 0.22 >More info 0.62 >More info Col in control medium root Original data GEO bulk
462 Col-0 +lincomycin 0.22 >More info 0.62 >More info Col-0 -lincomycin Original data GEO bulk
463 6-trichlorophenoxyacetic acid 3 h 0.28 >More info 0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
464 siliques AtHb1 control 0.31 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
465 IAA7mII over-expressor IAA Treated 0.14 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
466 Aerobic e1 ate2 0.21 >More info 0.62 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
467 aba1 hypocotyl 0.24 >More info 0.59 >More info Ler hypocotyl hypocotyl Original data GEO bulk
468 lht1 untreated 0.30 >More info 0.52 >More info WT untreated untreated leaf Original data GEO bulk
469 shoot-10 μM DEX- 6 hr 0.26 >More info 0.56 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
470 Shoot dark control 24h 0.22 >More info 0.60 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
471 Protoplast Induced 0.17 >More info 0.64 >More info Uninduced Original data GEO bulk
472 ein2-1 +Pep2 2h -0.28 >More info -0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
473 OE WRKY63.3 0.26 >More info 0.55 >More info OE WRKY40.4 none leaf Original data GEO bulk
474 sfr6 control -0.26 >More info -0.55 >More info WT control All aerial tissue Original data GEO bulk
475 Cambium 5 days NAA 0.22 >More info 0.59 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
476 abi1 hypocotyl 0.21 >More info 0.60 >More info Ler hypocotyl hypocotyl Original data GEO bulk
477 coi1-PsmES4326-24hpi -0.29 >More info -0.51 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
478 cat2-short-day 2d 0.29 >More info 0.51 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
479 9 hr Hypoxia Total RNA 0.30 >More info 0.50 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
480 Mutant sav3-2 (SH) 0.19 >More info 0.60 >More info Col-0 (SH) Original data GEO bulk
481 whole roots -Fe 48 hour 0.29 >More info 0.50 >More info whole roots standard Original data GEO bulk
482 PRR5-VP 12h light on -0.28 >More info -0.51 >More info WT 12h light on whole plant Original data GEO bulk
483 sav3-2 shade 0.19 >More info 0.60 >More info Col-0 shade seedlings Original data GEO bulk
484 Aerobic prt6 0.26 >More info 0.52 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
485 WT-elf18 0.28 >More info 0.50 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
486 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.26 >More info -0.52 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
487 Col 1d 0.27 >More info 0.51 >More info Col CA Leaves Original data
488 Salicylic Acid 3 h 0.21 >More info 0.55 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
489 Col-0 2HS 0.14 >More info 0.62 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
490 WT leaves - Fe 0.21 >More info 0.54 >More info WT leaves + Fe Leaves Original data GEO bulk
491 opr3 OPDA 2 h 0.17 >More info 0.58 >More info opr3 0 h Original data GEO bulk
492 Col-O high light 0.25 >More info 0.50 >More info Col-O bule light Original data GEO bulk
493 FarRed Light 45min -0.05 >More info -0.69 >More info White Light 45min Original data Light treatments
494 Infected pft1 leaf 0.14 >More info 0.60 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
495 ein3-1eil1-1 dark -0.24 >More info -0.50 >More info Wt dark whole 4-day old etiolated seedlings Original data GEO bulk
496 atgsnor1-1-avrB-6h 0.19 >More info 0.55 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
497 sicy-192 cotyledons 0.17 >More info 0.57 >More info WT cotyledons cotyledons Original data
498 ein2 1% sucrose 14-day-old -0.22 >More info -0.51 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
499 eds16 whole leaf 7dpi -0.19 >More info -0.54 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
500 pil5 red light 0.16 >More info 0.57 >More info Col-0 red light Original data GEO bulk
501 phyB mutant 22C 10hrs -0.19 >More info -0.54 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
502 sex1-3 0.14 >More info 0.59 >More info Col-WT leaves Original data GEO bulk
503 Chitin 0.21 >More info 0.52 >More info Col C Original data GEO bulk
504 Tsu-1 -Fe 24h 0.20 >More info 0.53 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
505 Tsu -Fe 24h Roots 0.20 >More info 0.53 >More info Tsu +Fe 24h Roots Original data GEO bulk
506 opr3 JA 2 h 0.15 >More info 0.58 >More info opr3 0 h Original data GEO bulk
507 vte2-1 1d vernalization 0.19 >More info 0.54 >More info WT 1d vernalization Original data GEO bulk
508 aox1a:rpoTmp untreated 0.23 >More info 0.50 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
509 pif4pif5 mut dark -0.21 >More info -0.51 >More info WT dark Original data GEO bulk
510 WUS-GR DEX Cycloheximide DEX -0.20 >More info -0.52 >More info WUS-GR DEX Cycloheximide Cycloheximide Dexamethasone Original data GEO bulk
511 Wt-BA-sample 0.18 >More info 0.54 >More info Wt-dmso-sample seedling Original data
512 FLIGHT TAGESB plate6 ROOTS 0.21 >More info 0.51 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
513 flu dark 8hours/30 minute light 0.09 >More info 0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
514 Root GLU1-KO -0.16 >More info -0.54 >More info Root Col(0) roots Original data GEO bulk
515 WT Red light 18h -0.17 >More info -0.52 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
516 WT-Dry 0.17 >More info 0.52 >More info WT-CK dehydration treatment 1h Original data
517 wnk8-1 untreated -0.18 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
518 Light 3day hml -0.66 >More info -0.02 >More info 0h hml Original data
519 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.52 >More info -0.16 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
520 OsRLCK253 expressing -0.16 >More info -0.52 >More info WT seedlings Original data GEO bulk
521 Mock pft1 leaf 0.06 >More info 0.62 >More info Mock Col-0 leaf water leaf Original data GEO bulk
522 agb1 -ABA GC -0.07 >More info -0.61 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
523 WT NAA 2h -0.14 >More info -0.53 >More info WT 0h Leaf tissue Original data GEO bulk
524 IAA/inhibitor B Treated 0.10 >More info 0.57 >More info IAA Treated Original data GEO bulk
525 cat2-short-day 4d 0.08 >More info 0.59 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
526 Col-0 24hpi A. brassicicola 0.64 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
527 HARAP aerobic -0.15 >More info -0.51 >More info WT aerobic aerobic Original data GEO bulk
528 xyl-grown cell culture- 1h 1mM Suc 0.00 >More info -0.66 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
529 Red/FR Light45min -0.04 >More info 0.70 >More info FarRed Light 45min Original data Light treatments
530 JA 3h 0.13 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
531 cat2-long-day 4d 0.08 >More info 0.57 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
532 Leaf wounded 0.04 >More info 0.60 >More info Leaf control vegetative leaf Original data GEO bulk
533 eds16 whole leaf 0h UI -0.07 >More info -0.57 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
534 12m.KCl 0.06 >More info 0.58 >More info To. KCl 14 day old Roots Original data GEO bulk
535 24h light (+Lincomycin) 0.08 >More info 0.55 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
536 bri1-116 -0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
537 seed germinating in countinuous light 24h SL -0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
538 4C 1h 0.02 >More info 0.59 >More info 4C 0h Original data GEO bulk
539 15m.KNO3 0.08 >More info 0.52 >More info To. KNO3 14 day old Roots Original data GEO bulk
540 T101D 10mM NH4NO3 0.08 >More info 0.52 >More info col 10mM NH4NO3 Root Original data
541 HairpinZ 4 h (leaf) 0.62 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
542 amiRAP aerobic -0.02 >More info -0.56 >More info WT aerobic aerobic Original data GEO bulk
543 shoot hypoxia total -0.00 >More info 0.58 >More info shoot control total Original data GEO bulk
544 dorn1-1 Root 100 mM ATP 30 min -0.07 >More info -0.50 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
545 atmyc2 Seedling BL 0.01 >More info -0.56 >More info WT Seedling BL Original data GEO bulk
546 -Sulfate 24 h 0.02 >More info 0.52 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
547 Lip0 UV 0.66 >More info -0.14 >More info Lip0 mock UV seedling Original data
548 P. infestans 6 h (leaf) 0.66 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
549 Shoot submergence 7h 0.51 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
550 Col PSTDC3000 24h 0.63 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
551 root - 08% oxygen - 2h -0.08 >More info 0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
552 2hr transitory KNO3 ECR cell -0.07 >More info 0.55 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
553 opr3 JA 0.5 h -0.03 >More info 0.51 >More info opr3 0 h Original data GEO bulk
554 Shoot apex inflorescence (after bolting) -0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
555 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
556 4h decapitation 0.08 >More info -0.53 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
557 Mh0 UV -0.58 >More info 0.17 >More info Mh0 mock UV seedling Original data
558 WT NAA 1h 0.20 >More info -0.54 >More info WT 0h Leaf tissue Original data GEO bulk