4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on rosette Dark Wounded
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List of experiments correlated with "rosette Dark Wounded"  Help Download transcriptome of top 30
Score Experiment Correlation from
rosette Dark Wounded		 Correlation to
rosette Dark Wounded		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 rosette Dark Wounded 1.00 >More info 1.00 >More info rosette Dark Control Original data GEO bulk
2 rosette Light Wounded 0.92 >More info 0.89 >More info rosette Light Control Original data GEO bulk
3 WT seedlings MV 0.82 >More info 0.76 >More info WT seedlings control Seedlings Original data GEO bulk
4 leaf13 0.77 >More info 0.80 >More info unwounded leaves none Original data GEO bulk
5 Wounding Stress3 h (shoot) 0.77 >More info 0.80 >More info Stress mock 3 h (shoot) Original data Stress treatments
6 flu 0.78 >More info 0.78 >More info WT Col Original data GEO bulk
7 flu over-tAPX 0.78 >More info 0.77 >More info WT Col Original data GEO bulk
8 WT flg22 2h 0.76 >More info 0.78 >More info WT 0h Leaf tissue Original data GEO bulk
9 HopZ1a treated 0.80 >More info 0.73 >More info col Original data GEO bulk
10 WT-Dry 0.72 >More info 0.80 >More info WT-CK dehydration treatment 1h Original data
11 ataf1-1 mutant Col-0 Bgh inoculated 0.80 >More info 0.72 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
12 AvrRpt2 Col-0 6hpi 0.80 >More info 0.71 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
13 current injection 0.68 >More info 0.83 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
14 Leaf wounded 0.71 >More info 0.80 >More info Leaf control vegetative leaf Original data GEO bulk
15 Rsch 8h 0.69 >More info 0.82 >More info Rsch CA Leaves Original data
16 oas-a1.1 Cd 24h 0.77 >More info 0.73 >More info Cd 24h root Shoot Original data GEO bulk
17 Pst-DC3000(avrRpm1)-4hpi 0.73 >More info 0.77 >More info Pst-DC3000-4hpi Original data GEO bulk
18 anac017-2 AntimycinA 3h -0.78 >More info -0.72 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
19 Methyl Jasmonate 1 h 0.71 >More info 0.79 >More info Mock 1 h Original data Basic hormone treatment of seedlings
20 Col-Luc WT 3h antimycin A 0.78 >More info 0.71 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
21 HopZ1a treated ulp1c ulp1d 0.79 >More info 0.69 >More info col Original data GEO bulk
22 WT Col-0 Bgh inoculated 0.75 >More info 0.73 >More info WT Col-0 Un-inoculated Original data GEO bulk
23 Leafminer locally damaged thaliana seedlings 0.78 >More info 0.69 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
24 chito-octamer 0.72 >More info 0.74 >More info Col Mock Original data GEO bulk
25 WT flg22 1h 0.70 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
26 chito-tetramer 0.70 >More info 0.74 >More info Col Mock Original data GEO bulk
27 ein2-1 9 hpi A. brassicicola 0.74 >More info 0.70 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
28 WT 6H Cold 0.75 >More info 0.69 >More info WT control Original data GEO bulk
29 Col-0-avrB-6h 0.71 >More info 0.73 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
30 col-5 hrpA 12h 0.71 >More info 0.72 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
31 WT+chitooctaose 0.70 >More info 0.72 >More info WT+water chitooctaose seedlings Original data GEO bulk
32 Pto inoculated 0.75 >More info 0.66 >More info col Original data GEO bulk
33 Botrytis cinerea 48h 0.75 >More info 0.66 >More info control 48h Original data GEO bulk
34 col-5 DC3000-avrRpm 4h 0.66 >More info 0.75 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
35 Col 1d 0.66 >More info 0.75 >More info Col CA Leaves Original data
36 DC3000 24h 0.74 >More info 0.67 >More info Mock 24h DC3000 Original data GEO bulk
37 ice1 control 0.66 >More info 0.74 >More info WT control Original data GEO bulk
38 miR393 flg22 1h 0.66 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
39 AtLysM RLK1 mutant chitooctaose -0.74 >More info -0.66 >More info WT chitooctaose Original data GEO bulk
40 irradiated leaf (WT 5d) 0.75 >More info 0.65 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
41 WT no Pi 0.82 >More info 0.58 >More info WT complete seedlings Original data
42 Cor 10h 0.75 >More info 0.65 >More info Mock 10h Cor Original data GEO bulk
43 col-5 DC3000 12h 0.70 >More info 0.70 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
44 sid2-2 9 hpi A. brassicicola 0.75 >More info 0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
45 Selenate (root) 0.68 >More info 0.71 >More info Ws (root) Original data GEO bulk
46 Root Selenate 0.68 >More info 0.71 >More info Root control 40 micromolar selenate Root Original data GEO bulk
47 Methyl Jasmonate 0.5 h 0.67 >More info 0.72 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
48 ulp1c ulp1d +Pto 0.73 >More info 0.66 >More info ulp1c ulp1d mock Original data GEO bulk
49 Col 8h 0.66 >More info 0.73 >More info Col CA Leaves Original data
50 WT resupplied Pi 4h 0.82 >More info 0.57 >More info WT complete seedlings Original data
51 Cycloheximide 3 h 0.69 >More info 0.69 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
52 hrpA 7h 0.69 >More info 0.69 >More info Mock 7h hrpA Original data GEO bulk
53 Col leaf 100mM NaCl 0.76 >More info 0.61 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
54 Col leaf 100mM NaCl 0.76 >More info 0.61 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
55 WT+H2O2 0.65 >More info 0.72 >More info WT H2O2 Original data GEO bulk
56 Col 100mM NaCl 0.76 >More info 0.61 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
57 Laer Flg22+GA 1h 0.65 >More info 0.72 >More info Laer Control leaf discs Original data GEO bulk
58 hrpA fliC 7h 0.72 >More info 0.65 >More info Mock 7h hrpA fliC Original data GEO bulk
59 gun1gun5 far-red pretreated -0.68 >More info -0.69 >More info WT far-red pretreated Original data GEO bulk
60 WT AntimycinA 3h 0.72 >More info 0.65 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
61 hrcC 0.70 >More info 0.66 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
62 Col0-PsmES4326-24hpi 0.75 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
63 GA 0.64 >More info 0.71 >More info none GA Rosette Original data GEO bulk
64 B.cinerea 18 h infection 0.71 >More info 0.64 >More info Mock 18 h Original data Botrytis cinerea infection
65 Botrytis cinerea 18h 0.71 >More info 0.64 >More info control 18h Original data GEO bulk
66 wt systemic wounding 0.64 >More info 0.71 >More info wt control leaves Original data GEO bulk
67 WT 3H Cold 0.55 >More info 0.79 >More info WT control Original data GEO bulk
68 Leafminer damaged seedlings 0.78 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
69 DC3000 7h 0.64 >More info 0.70 >More info Mock 7h DC3000 Original data GEO bulk
70 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.77 >More info 0.56 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
71 Col-0 under 4 days salt 0.78 >More info 0.55 >More info Col-0 under control 4 days salt treatment rosette Original data
72 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.78 >More info 0.55 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
73 Col-0 ozone 0.77 >More info 0.56 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
74 WT chitooctaose 0.68 >More info 0.65 >More info WT water Original data GEO bulk
75 root protoplasts 40 mM NaCl 0.67 >More info 0.65 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
76 Col-0 9 hpi A. brassicicola 0.68 >More info 0.64 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
77 35S:VND7-VP16-GR+CHX 0.55 >More info 0.77 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
78 9 hr Hypoxia 1 hr recovery IP RNA 0.76 >More info 0.56 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
79 AFB1 flg22 1h 0.65 >More info 0.67 >More info WT 0h Leaf tissue Original data GEO bulk
80 IMI 4mM 0.76 >More info 0.56 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
81 Laer Flg22 1h 0.63 >More info 0.69 >More info Laer Control leaf discs Original data GEO bulk
82 WT 24H Cold 0.70 >More info 0.62 >More info WT control Original data GEO bulk
83 Shoot -Cs 0.58 >More info 0.73 >More info Control-shoot Original data GEO bulk
84 WT 2-4h Xanthomonas 0.62 >More info 0.69 >More info WT T0 Original data GEO bulk
85 GST NPP1 4 h (leaf) 0.69 >More info 0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
86 AgNO3 3 h 0.63 >More info 0.68 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
87 Shoot -K 0.68 >More info 0.62 >More info Control-shoot Original data GEO bulk
88 K starvation (shoot) 0.68 >More info 0.62 >More info Ws (shoot) Original data GEO bulk
89 Te 8h 0.59 >More info 0.71 >More info Te CA Leaves Original data
90 Light 0.59 >More info 0.71 >More info Control Original data GEO bulk
91 Col-0 flu HL 3h 0.72 >More info 0.58 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
92 Rsch 1d 0.57 >More info 0.73 >More info Rsch CA Leaves Original data
93 short 12-degree- 0.60 >More info 0.69 >More info control short Original data GEO bulk
94 Transgenic LEC2GR Seedling 1h Dex 0.63 >More info 0.66 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
95 Te ozone 0.74 >More info 0.55 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
96 FLIGHT TAGESB plate6 ROOTS 0.56 >More info 0.73 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
97 Protoplast Induced 0.55 >More info 0.74 >More info Uninduced Original data GEO bulk
98 atmospheric CO2 high Mg shoot 0.79 >More info 0.49 >More info atmospheric CO2 normal Mg shoot Shoot Original data
99 seedlings protease IV 0.54 >More info 0.74 >More info seedlings nontreated control whole seedling Original data
100 WT NAA/flg 1h 0.55 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
101 WT 90-105 min Xanthomonas 0.56 >More info 0.72 >More info WT T0 Original data GEO bulk
102 coi1-16 ein2 sid2 ctrl -0.73 >More info -0.55 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
103 aba1 hypocotyl 0.58 >More info 0.69 >More info Ler hypocotyl hypocotyl Original data GEO bulk
104 pepr1-1 Pepr2-3 +Pep2 2h -0.67 >More info -0.60 >More info WT +Pep2 2h Pep2 Original data GEO bulk
105 mpk6-ko Flg22 4h 0.68 >More info 0.59 >More info mpk6-ko H2O 4h Original data GEO bulk
106 CLO 4mM 0.64 >More info 0.62 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
107 Leaf systemic 0.59 >More info 0.67 >More info Leaf control vegetative leaf Original data GEO bulk
108 CMP 4hr 0.66 >More info 0.60 >More info Acetone 4hr root Original data GEO bulk
109 bHLH122 ox -0.64 >More info -0.62 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
110 CMP 24hr 0.66 >More info 0.60 >More info Acetone 24hr root Original data GEO bulk
111 M6PR transgenic leaf 100mM NaCl -0.69 >More info -0.57 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
112 msh1 albino 0.70 >More info 0.55 >More info WT aerial part Original data GEO bulk
113 Fenclorim 4hr 0.67 >More info 0.58 >More info Acetone 4hr root Original data GEO bulk
114 Cold Stress 24 h (shoot) 0.70 >More info 0.55 >More info Stress mock 24 h (shoot) Original data Stress treatments
115 35S:RPS4 eds1-2 8h -0.67 >More info -0.58 >More info 35S:RPS4 8h leaves Original data
116 Flagellin 4 h (leaf) 0.68 >More info 0.56 >More info Mock 4 h (leaf) Original data Elicitor treatments
117 Phaseolicola 2 h (leaf) 0.51 >More info 0.73 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
118 short 8-degree- 0.65 >More info 0.59 >More info control short Original data GEO bulk
119 root stele 40 mM NaCls 0.72 >More info 0.52 >More info root stele Original data GEO bulk
120 ppi2 0.65 >More info 0.59 >More info WT whole plant Original data GEO bulk
121 Hydrogen Peroxide 500 uM 0.54 >More info 0.70 >More info Control RB and PER Hydrogen Peroxide Original data
122 TNT-seedlings 0.47 >More info 0.77 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
123 abi1 hypocotyl 0.48 >More info 0.76 >More info Ler hypocotyl hypocotyl Original data GEO bulk
124 Laer pretreat GA+JA Flg22 0h 0.67 >More info 0.56 >More info Laer pretreat water control leaf discs Original data GEO bulk
125 short 10-degree- 0.64 >More info 0.59 >More info control short Original data GEO bulk
126 IRP1-OE-Fe--shoot 0.71 >More info 0.52 >More info COL-0-Fe--shoot shoot Original data
127 inhibitor A Treated 0.64 >More info 0.59 >More info Negative Control Original data GEO bulk
128 npr1 sni1 SA 0.69 >More info 0.54 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
129 coronatine 0.70 >More info 0.53 >More info control rosette leaves Original data
130 Atss3 Dark8 -0.67 >More info -0.55 >More info Atss3 Dark0.5 Original data GEO bulk
131 npr1-1 SA -0.74 >More info -0.48 >More info Col-0 SA complete seedling Original data
132 gai MeJA 1h -0.66 >More info -0.55 >More info Laer MeJA 1h leaf discs Original data GEO bulk
133 ein5-1 ski2-3 0.69 >More info 0.52 >More info Col-0 aerial tissue Original data
134 rcf1-1 cold 12h 0.68 >More info 0.53 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
135 ASL9-ox -0.72 >More info -0.49 >More info WT aerial parts of seedlings Original data GEO bulk
136 Heat shock optimum 0.56 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
137 Seedling KUA1-IOX est 0.49 >More info 0.72 >More info Seedling KUA1-IOX mock Original data
138 del1-1 mutant 5d uninfected 0.65 >More info 0.55 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
139 35S:RPS4 eds1-2 2h -0.53 >More info -0.67 >More info 35S:RPS4 2h leaves Original data
140 35S:RPS4 eds1-2 24h -0.67 >More info -0.53 >More info 35S:RPS4 24h leaves Original data
141 WT-NOCO2 INFECTED 0.65 >More info 0.55 >More info WT-MOCK Original data GEO bulk
142 Dex-rga(delta17) 4h GA4+DEX -0.61 >More info -0.59 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
143 pnp1-1 1wk +P 0.76 >More info 0.44 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
144 Col-0 drought 0.63 >More info 0.57 >More info Col-0 control Original data GEO bulk
145 JA 0.59 >More info 0.60 >More info Col-0 mock Whole seedling Original data GEO bulk
146 9 hr Hypoxia 1 hr recovery Total RNA 0.67 >More info 0.52 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
147 Mutant gh3.5-1D (AvrRpt2) 0.66 >More info 0.53 >More info Col-0 (AvrRpt2) Original data GEO bulk
148 Cd 24h root -0.66 >More info -0.53 >More info WT-Untreated Shoot Original data GEO bulk
149 inhibitor B Treated 0.63 >More info 0.56 >More info Negative Control Original data GEO bulk
150 Chitosan 3h Treatment 0.65 >More info 0.54 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
151 dTLEc systemic wounding -0.56 >More info -0.62 >More info wt systemic wounding leaves Original data GEO bulk
152 Laer pretreat JA Flg22 1h 0.56 >More info 0.62 >More info Laer pretreat water control leaf discs Original data GEO bulk
153 oligomycin 4 h 0.62 >More info 0.56 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
154 Mutant cry1 (High Light) -0.65 >More info -0.53 >More info Col-0 (High Light) Original data GEO bulk
155 Col-0 low oxygen 0.67 >More info 0.51 >More info Col-0 Original data GEO bulk
156 cry1 high light -0.65 >More info -0.53 >More info Col-O high light Original data GEO bulk
157 Kas -Fe 24h Roots -0.58 >More info -0.60 >More info Kas +Fe 24h Roots Original data GEO bulk
158 ceh1 mutant 0.69 >More info 0.49 >More info Parent line Original data
159 Kas-1 -Fe 24h -0.58 >More info -0.60 >More info Kas-1 +Fe 24h roots Original data GEO bulk
160 rao2 H2O2 3h -0.75 >More info -0.43 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
161 OsSAP11 expressing -0.57 >More info -0.61 >More info WT seedlings Original data GEO bulk
162 coi1-16 ein2 sid2 ozone 0.69 >More info 0.49 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
163 Sulfometuron EC50 0.71 >More info 0.47 >More info Carrier Original data GEO bulk
164 AFB1 flg22 2h 0.66 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
165 atr mitomycin C 0.67 >More info 0.50 >More info WT mitomycin C shoot apical meristem Original data
166 sid2-avrB-6h 0.55 >More info 0.62 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
167 Col-0 SA 0.69 >More info 0.48 >More info Col-0 Original data GEO bulk
168 DFPM 0.57 >More info 0.60 >More info control Original data GEO bulk
169 Laer pretreat GA Flg22 1h 0.46 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
170 Methyl Jasmonate 3 h 0.62 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
171 miR393 flg22 2h 0.53 >More info 0.63 >More info WT 0h Leaf tissue Original data GEO bulk
172 CT101 ozone 0.69 >More info 0.47 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
173 E.coli TUV86 2 fliC 7h 0.58 >More info 0.58 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
174 Col-0 DCA 48h 0.71 >More info 0.45 >More info Col-0 MOCK 48h Original data GEO bulk
175 Col-0 WT HL 3h 0.69 >More info 0.46 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
176 seedling 12h after HZE WT 0.71 >More info 0.44 >More info seedling day 1 unirradiated WT 12h Original data
177 C24 ozone 0.66 >More info 0.49 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
178 safener treated 0.65 >More info 0.50 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
179 ref6-1 0.60 >More info 0.55 >More info Col whole seedling Original data GEO bulk
180 arf2 brz -0.61 >More info -0.54 >More info arf2 mock Original data GEO bulk
181 Salt Stress 24 h (root) 0.68 >More info 0.47 >More info Stress mock 24 h (root) Original data Stress treatments
182 WT 24h cold 0.58 >More info 0.56 >More info WT warm 24h cold entire aerial part Original data GEO bulk
183 E.coli 0157 H7 7h 0.56 >More info 0.58 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
184 plant (Col-0) 4h OPDA 0.59 >More info 0.55 >More info plant (Col-0) 4h control Original data GEO bulk
185 Dex-rga(delta17) 2h GA4+DEX -0.62 >More info -0.52 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
186 pXVE:HA-EDM2-a untreated -0.53 >More info -0.61 >More info Col-0 untreated seedlings Original data GEO bulk
187 NJ15 0.62 >More info 0.52 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
188 CMV-A2b mutant 0.62 >More info 0.52 >More info Mock-At Aerial tissues Original data GEO bulk
189 HARAP hypoxic 0.62 >More info 0.52 >More info hypoxic hypoxia Original data GEO bulk
190 OPDA 4 h 0.59 >More info 0.55 >More info Col-0 Original data GEO bulk
191 HSP90 Reduced RNAi-A2 0.64 >More info 0.50 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
192 FarRed Light 45min -0.46 >More info -0.68 >More info White Light 45min Original data Light treatments
193 dor drought 0.69 >More info 0.45 >More info WT drought Original data GEO bulk
194 WT powdery mildew 0.69 >More info 0.45 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
195 gh3.5-1D 48 hpi 0.68 >More info 0.45 >More info Col-0 uninoculated Original data GEO bulk
196 wrky33 Bc inoculation 14h 0.71 >More info 0.42 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
197 ws 24h4c q8ws 0.71 >More info 0.42 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
198 shoots bhlh100/101 0uM Fe 0.61 >More info 0.52 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
199 Heat and anoxia 0.69 >More info 0.44 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
200 col 24h4c set4 0.69 >More info 0.44 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
201 seedling 24h after Gamma WT 0.65 >More info 0.48 >More info seedling day 2 unirradiated WT 24h Original data
202 elevated CO2 high Mg shoot -0.75 >More info -0.38 >More info atmospheric CO2 high Mg shoot Shoot Original data
203 atgsnor1-3-avrB-6h 0.64 >More info 0.49 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
204 Lipopolysaccaride4 h (leaf) 0.64 >More info 0.49 >More info Mock 4 h (leaf) Original data Elicitor treatments
205 coi1-PsmES4326-24hpi -0.51 >More info -0.62 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
206 Laer Flg22+GA 2h 0.58 >More info 0.54 >More info Laer Control leaf discs Original data GEO bulk
207 plant (tga2-5-6) 4h OPDA 0.56 >More info 0.56 >More info plant (tga2-5-6) 4h control Original data GEO bulk
208 Col whole leaf 7dpi 0.59 >More info 0.53 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
209 Mature callus 0.67 >More info 0.45 >More info Young callus hypocotyls Original data GEO bulk
210 erf104-ko Flg22 4h 0.56 >More info 0.56 >More info erf104-ko H2O 4h Original data GEO bulk
211 myb61 cork 0.47 >More info 0.65 >More info wt cork cork Original data GEO bulk
212 LTN008-2 aza-dc 0.66 >More info 0.45 >More info LTN012-2 Mock Original data
213 Laer Flg22 2h 0.65 >More info 0.46 >More info Laer Control leaf discs Original data GEO bulk
214 IRP1-OE-Ctrl--root 0.55 >More info 0.56 >More info COL-0-Ctrl--root root Original data
215 root callus inducing medium 96 h -0.73 >More info -0.38 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
216 nia1nia2 0.63 >More info 0.48 >More info Col-0 whole seedlings Original data GEO bulk
217 npr1 sni1 brca2a SA -0.64 >More info -0.47 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
218 ARR22-ox (t-zeatin 3 h) 0.69 >More info 0.42 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
219 RRE2 Chitin 0.63 >More info 0.47 >More info Chitin Original data GEO bulk
220 myb61 xylem 0.50 >More info 0.60 >More info wt xylem xylem Original data GEO bulk
221 whole roots 140 mM NaCl 30 minutes 0.52 >More info 0.58 >More info whole roots standard Original data GEO bulk
222 Infected pft1 leaf 0.53 >More info 0.57 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
223 root protophloem 40 mM NaCl 0.71 >More info 0.39 >More info root protophloem Original data GEO bulk
224 anac017-2 H2O2 3h -0.65 >More info -0.45 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
225 Rose Bengal 0.5 uM 0.46 >More info 0.64 >More info Control RB and PER Rose Bengal Original data
226 Atss3 Light4 -0.54 >More info -0.55 >More info Atss3 Dark0.5 Original data GEO bulk
227 Col-0 +ABA LF 0.64 >More info 0.45 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
228 col-5 hrpA 2h 0.53 >More info 0.56 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
229 cop1 Seedling BL+ABA 0.68 >More info 0.41 >More info WT Seedling BL+ABA Original data GEO bulk
230 efr-1 +elf18 10h -0.53 >More info -0.56 >More info WT +elf18 10h elf18 Original data GEO bulk
231 Laer Alternaria 3dpi -0.59 >More info -0.50 >More info Laer Control leaf discs Original data GEO bulk
232 Laer pretreat GA+JA Flg22 1h 0.62 >More info 0.47 >More info Laer pretreat water control leaf discs Original data GEO bulk
233 camta1/2 warm -0.57 >More info -0.52 >More info WT 24h cold entire aerial part Original data GEO bulk
234 A. thaliana-A. lyrata hybrid -0.61 >More info -0.48 >More info A. thaliana mature leaves before flowering Original data GEO bulk
235 WUSp cells 0.60 >More info 0.49 >More info Protoplast Induced Original data GEO bulk
236 Laer treat paclobutrazol (PAC) 0.62 >More info 0.47 >More info Laer Control leaf discs Original data GEO bulk
237 Salt Stress 24 h (shoot) 0.66 >More info 0.42 >More info Stress mock 24 h (shoot) Original data Stress treatments
238 ABA 1 h 0.50 >More info 0.58 >More info Mock 1 h Original data Basic hormone treatment of seedlings
239 IAA/inhibitor A Treated 0.54 >More info 0.54 >More info IAA Treated Original data GEO bulk
240 Col-0 37C 0.69 >More info 0.39 >More info Col-0 22C Original data GEO bulk
241 rosettes WT drought 0.65 >More info 0.43 >More info rosettes WT watered Original data GEO bulk
242 vte2-1 3d vernalization 0.59 >More info 0.49 >More info WT 3d vernalization Original data GEO bulk
243 csn5 (csn5a-2 csn5b) light 0.71 >More info 0.37 >More info WT light Original data GEO bulk
244 root callus inducing medium 24h -0.71 >More info -0.37 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
245 vte2 leaves 48h LT 0.67 >More info 0.41 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
246 rosette leaves lcr 0.45 >More info 0.63 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
247 wnk8-2 untreated -0.39 >More info -0.69 >More info Col-0 untreated seedlings Original data GEO bulk
248 IXB induced 0.45 >More info 0.63 >More info Methanol IXB Suspension cells Original data GEO bulk
249 seedling 24h after HZE WT 0.75 >More info 0.32 >More info seedling day 2 unirradiated WT 24h Original data
250 WT-SA 0.68 >More info 0.39 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
251 ABA DFPM 0.55 >More info 0.52 >More info control Original data GEO bulk
252 Ws 100mM NaCl 0.57 >More info 0.50 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
253 Ws leaf 100mM NaCl 0.57 >More info 0.50 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
254 root callus inducing medium 48 h -0.72 >More info -0.35 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
255 anac017-1 H2O2 3h -0.53 >More info -0.53 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
256 Bur-0-3h IAA 0.60 >More info 0.46 >More info Bur-0h IAA whole plant Original data GEO bulk
257 Light 0.5h steady-state 0.57 >More info 0.49 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
258 spx1 spx2 complete 0.64 >More info 0.41 >More info WT complete seedlings Original data
259 npr1-3 MOCK 48h -0.63 >More info -0.42 >More info Col-0 MOCK 48h Original data GEO bulk
260 ga1-3/brm-1 0.72 >More info 0.33 >More info wt shoots Original data GEO bulk
261 low water potential 0.67 >More info 0.38 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
262 nia1nia2noa1-2 0.61 >More info 0.44 >More info Col-0 whole seedlings Original data GEO bulk
263 atr mock 0.66 >More info 0.39 >More info WT mock shoot apical meristem Original data
264 bak1-3 +Pep2 10h 0.57 >More info 0.48 >More info WT +Pep2 10h Pep2 Original data GEO bulk
265 ex2 flu dark 8hours/30 minute light 0.35 >More info 0.70 >More info col dark 8hours/30 minute light Original data GEO bulk
266 Light 0.5h polysome-bound 0.57 >More info 0.47 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
267 WT Bc inoculation 14h 0.59 >More info 0.45 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
268 WT +elf18 10h 0.61 >More info 0.43 >More info WT untreated elf18 Original data GEO bulk
269 pnp1-1 3h +P 0.65 >More info 0.39 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
270 ckh1 CK200 0.54 >More info 0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
271 Cor hrpS 10h 0.72 >More info 0.32 >More info Mock 10h Cor hrpS Original data GEO bulk
272 pmr5 0.55 >More info 0.49 >More info Col-0 Original data GEO bulk
273 penta Alternaria 3dpi 0.58 >More info 0.46 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
274 35S::ERF104 Flg22 4h 0.52 >More info 0.52 >More info 35S::ERF104 H2O 4h Original data GEO bulk
275 gpa1 -ABA GC -0.37 >More info -0.67 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
276 Col ozone 3h 0.48 >More info 0.56 >More info Col clean-air 3h ozone Original data GEO bulk
277 cat2-2; 8h switch to ambient CO2 concentrations; 0.47 >More info 0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
278 9 hr Hypoxia IP RNA 0.55 >More info 0.48 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
279 whole roots 140 mM NaCl 1 hour 0.50 >More info 0.53 >More info whole roots standard Original data GEO bulk
280 toc1-1-77hr 0.68 >More info 0.35 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
281 SOS1 0mM NaCl 0.66 >More info 0.37 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
282 Dark 3day ivd 0.67 >More info 0.36 >More info 0h ivd Original data
283 Col whole leaf 5dpi 0.60 >More info 0.43 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
284 CMV-WT 0.60 >More info 0.42 >More info Mock-At Aerial tissues Original data GEO bulk
285 Laer pretreat JA Flg22 0h 0.53 >More info 0.49 >More info Laer pretreat water control leaf discs Original data GEO bulk
286 Col-0-3h IAA 0.64 >More info 0.38 >More info Col-0-0h IAA whole plant Original data GEO bulk
287 upf3 0.58 >More info 0.44 >More info WT whole plant Original data GEO bulk
288 atr zebularine 0.61 >More info 0.41 >More info WT zebularine shoot apical meristem Original data
289 GST 4 h (leaf) 0.53 >More info 0.49 >More info Mock 4 h (leaf) Original data Elicitor treatments
290 JA 3h 0.33 >More info 0.69 >More info EtOH 3h 3hr Original data GEO bulk
291 max4 hypocotyl 0.49 >More info 0.53 >More info wt hypocotyl hypocotyl Original data GEO bulk
292 aox1a:rpoTmp MLD stressed -0.54 >More info -0.47 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
293 Fenclorim 24hr 0.58 >More info 0.43 >More info Acetone 24hr root Original data GEO bulk
294 npr1 sni1 brca2a 0.60 >More info 0.41 >More info npr1 sni1 water water seedling Original data GEO bulk
295 Col-0 Flg22 4h 0.50 >More info 0.51 >More info Col-0 H2O 4h Original data GEO bulk
296 edm2-2 untreated -0.53 >More info -0.48 >More info Col-0 untreated seedlings Original data GEO bulk
297 HSP90 Reduced RNAi-A3 0.61 >More info 0.40 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
298 Col-O high light 0.58 >More info 0.43 >More info Col-O bule light Original data GEO bulk
299 UV 0.65 >More info 0.36 >More info WT aerial region Original data GEO bulk
300 rli 0.65 >More info 0.36 >More info WT whole plant Original data GEO bulk
301 TA induced 0.40 >More info 0.61 >More info Methanol TA Suspension cells Original data GEO bulk
302 1h +Pi -0.35 >More info -0.66 >More info 1h -Pi root Original data GEO bulk
303 0.125 mM gold 24 h 0.49 >More info 0.52 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
304 opr3 JA 0.5 h 0.30 >More info 0.71 >More info opr3 0 h Original data GEO bulk
305 root Dosed gold 0.49 >More info 0.52 >More info root No gold .125 mM gold 24 h roots Original data
306 Osmotic Stress 24 h (shoot) 0.63 >More info 0.37 >More info Stress mock 24 h (shoot) Original data Stress treatments
307 arr-dmso-sample 0.68 >More info 0.32 >More info Wt-dmso-sample seedling Original data
308 seedling 6h after HZE WT 0.67 >More info 0.33 >More info seedling day 1 unirradiated WT 6h Original data
309 Leaf GLU1-KO 0.55 >More info 0.45 >More info Leaf Col(0) rosette leaves Original data GEO bulk
310 WT 3h -P 0.55 >More info 0.45 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
311 WT Shoot-Pi 0.71 >More info 0.29 >More info WT Shoot+Pi shoots Original data GEO bulk
312 shoot-10 μM DEX- 3 hr 0.48 >More info 0.52 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
313 treated group 0.60 >More info 0.39 >More info Control group Original data
314 axr1 hypocotyl 0.54 >More info 0.45 >More info wt hypocotyl hypocotyl Original data GEO bulk
315 WT Seedling BL+ABA 0.63 >More info 0.36 >More info WT Seedling BL Original data GEO bulk
316 Laer pretreat GA+JA Flg22 2h 0.61 >More info 0.38 >More info Laer pretreat water control leaf discs Original data GEO bulk
317 DC3000 2 h (leaf) 0.42 >More info 0.57 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
318 P.p 30hai 0.41 >More info 0.58 >More info At-Control roots Original data GEO bulk
319 P.p 6hai 0.45 >More info 0.54 >More info At-Control roots Original data GEO bulk
320 ice1 6H Cold 0.38 >More info 0.61 >More info WT 6H Cold Original data GEO bulk
321 gpa1-4/agb1-2 clean-air 3h -0.49 >More info -0.50 >More info Col clean-air 3h clean-air Original data GEO bulk
322 Imidazolinone EC50 0.59 >More info 0.39 >More info Carrier (Imidazolinone) Original data GEO bulk
323 pmr5 pmr6 0.53 >More info 0.45 >More info Col-0 Original data GEO bulk
324 NahG 0.51 >More info 0.47 >More info Col-0 Leaves Original data GEO bulk
325 Mutant siz1-3 (Drought) 0.61 >More info 0.37 >More info Col-0 (Drought) Original data GEO bulk
326 Cor 24h 0.62 >More info 0.36 >More info Mock 24h Cor Original data GEO bulk
327 21h-DC3000 avrRpm1 -0.60 >More info -0.38 >More info 21h-DC3000 leaves Original data GEO bulk
328 WT cold 0.54 >More info 0.44 >More info WT control All aerial tissue Original data GEO bulk
329 Anoxia 0.56 >More info 0.42 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
330 siz1-3 drought 0.61 >More info 0.37 >More info Col-0 drought Original data GEO bulk
331 phr1 phl1 Root-Pi 0.64 >More info 0.34 >More info WT Shoot+Pi roots Original data GEO bulk
332 shoots bhlh100/101 100uM Fe 0.58 >More info 0.40 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
333 SLWF infested 0.56 >More info 0.42 >More info SLWF uninfested rosette tissue Original data GEO bulk
334 8h-DC3000 hrpA 0.34 >More info 0.64 >More info 8h-DC3000 leaves Original data GEO bulk
335 bZIP1ko mutant N+Light- 0.42 >More info 0.56 >More info WT-sib N+Light- whole plant Original data GEO bulk
336 opr3 JA 2 h 0.28 >More info 0.70 >More info opr3 0 h Original data GEO bulk
337 Elevated CO2 fully expanded leaf 0.60 >More info 0.37 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
338 35S::MBF1c 0.60 >More info 0.37 >More info control Original data GEO bulk
339 ein3 eil1 0.58 >More info 0.39 >More info Col-0 mock Whole seedling Original data GEO bulk
340 smg7b-1 0.60 >More info 0.37 >More info WT whole plant Original data GEO bulk
341 WT H2O2 3h 0.54 >More info 0.43 >More info WT water 3h 3h_H2O2 Original data GEO bulk
342 penta Pst DC3000 12hpi 0.65 >More info 0.32 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
343 CDB1-Knockout -0.51 >More info -0.46 >More info WT Original data GEO bulk
344 60m light 0.53 >More info 0.44 >More info before light whole seedlings Original data GEO bulk
345 short 14-degree- 0.57 >More info 0.40 >More info control short Original data GEO bulk
346 rdr6-15 -0.63 >More info -0.34 >More info Col-0 Original data GEO bulk
347 SA 4mM 0.63 >More info 0.34 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
348 P.syringae AvrRpt2 4 h (leaf) 0.42 >More info 0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
349 flu dark 8hours/30 minute light 0.23 >More info 0.74 >More info col dark 8hours/30 minute light Original data GEO bulk
350 miR393 0h -0.41 >More info -0.56 >More info WT 0h Leaf tissue Original data GEO bulk
351 pho1 0.61 >More info 0.35 >More info Col2WT Original data GEO bulk
352 RRE1 Chitin 0.63 >More info 0.33 >More info Chitin Original data GEO bulk
353 Mutant coi1(leaf) -0.53 >More info -0.43 >More info Col-0 (leaf) Original data GEO bulk
354 gai Control 0.53 >More info 0.43 >More info Laer Control leaf discs Original data GEO bulk
355 Glyphosate EC50 0.63 >More info 0.33 >More info Carrier (Glyphosate) Original data GEO bulk
356 WT NAA 2h -0.51 >More info -0.45 >More info WT 0h Leaf tissue Original data GEO bulk
357 sicy-192 gun1-101 cotyledons 0.57 >More info 0.39 >More info WT cotyledons cotyledons Original data
358 1 h Light IP RNA -0.43 >More info -0.53 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
359 albino Ds13-2198-1 -0.46 >More info -0.50 >More info control Original data GEO bulk
360 fls1-3 0.33 >More info 0.63 >More info Col-0 Rosette leaves Original data
361 35S::PI ap3-3 35S::AP-GR +DEX 0.40 >More info 0.55 >More info 0hr DEX Original data GEO bulk
362 8hr-pH4.5 0.52 >More info 0.43 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
363 rosettes myoox drought 0.58 >More info 0.37 >More info rosettes myoox watered Original data GEO bulk
364 shoots WT 0uM Fe 0.58 >More info 0.37 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
365 Heat no recovery 0.61 >More info 0.34 >More info Mock no recovery seedling Original data GEO bulk
366 Heat 0.60 >More info 0.35 >More info Control 90 minutes at 38°C. Original data GEO bulk
367 35:SUB1A 0.59 >More info 0.36 >More info WT whole seedling Original data GEO bulk
368 4C 2h(SOIL) 0.22 >More info 0.73 >More info 4C 0h(SOIL) Original data GEO bulk
369 scrm-D 0.55 >More info 0.39 >More info Col-0 WT whole seedling Original data GEO bulk
370 Ws-2 high light 0.62 >More info 0.32 >More info Ws-2 low light Original data GEO bulk
371 clf-28 swn-7 0.59 >More info 0.35 >More info Col whole plant Original data GEO bulk
372 5-Triiodobenzoic acid3 h 0.50 >More info 0.44 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
373 ABA 3 h 0.53 >More info 0.41 >More info Mock 3 h Original data Basic hormone treatment of seedlings
374 Cold Stress 24 h (root) 0.51 >More info 0.43 >More info Stress mock 24 h (root) Original data Stress treatments
375 toc1-1-53hr 0.51 >More info 0.43 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
376 Whole root - S 3H 0.42 >More info 0.52 >More info Whole root - S 0H Original data GEO bulk
377 csn3-1 light 0.66 >More info 0.27 >More info WT light Original data GEO bulk
378 atgsnor1-1 -0.53 >More info -0.40 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
379 WT 1wk -P 0.67 >More info 0.26 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
380 FHY3p dark+DEX -0.54 >More info -0.39 >More info FHY3p dark+mock Original data GEO bulk
381 ced1 -0.56 >More info -0.37 >More info WT PEG 6hr seedlings Original data GEO bulk
382 Red/FR Light45min 0.25 >More info 0.68 >More info FarRed Light 45min Original data Light treatments
383 shoot hypoxia pSUC2 0.63 >More info 0.30 >More info shoot hypoxia total Original data GEO bulk
384 root cells stele -Fe 0.50 >More info 0.43 >More info whole roots standard Original data GEO bulk
385 6-trichlorophenoxyacetic acid 3 h 0.33 >More info 0.60 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
386 plant (tga2-5-6) 4h phytoprostane A1 0.43 >More info 0.50 >More info plant (tga2-5-6) 4h control Original data GEO bulk
387 GiantCell Root -0.43 >More info -0.50 >More info Control Root laser captured giant cells Original data GEO bulk
388 sta1 0.56 >More info 0.36 >More info WT Original data GEO bulk
389 Laer pretreat GA Flg22 0h 0.54 >More info 0.38 >More info Laer pretreat water control leaf discs Original data GEO bulk
390 root columella root cap 40 mM NaCl 0.53 >More info 0.39 >More info root columella root cap Original data GEO bulk
391 mkk1/mkk2 24h BTH rep 0.54 >More info 0.38 >More info Col-0 24h BTH rep Original data GEO bulk
392 coi1-2 0.39 >More info 0.53 >More info Col-0 mock Whole seedling Original data GEO bulk
393 Col leaf scrape 5 dpi 0.63 >More info 0.29 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
394 Col-7 Sucrose 0.57 >More info 0.35 >More info col-7 Original data GEO bulk
395 aox1a(line) MLD stressed 0.57 >More info 0.35 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
396 cop1 Seedling BL 0.51 >More info 0.41 >More info WT Seedling BL Original data GEO bulk
397 long 17-degree- 0.41 >More info 0.51 >More info control long Original data GEO bulk
398 wnk8-1 untreated -0.29 >More info -0.63 >More info Col-0 untreated seedlings Original data GEO bulk
399 wrky72-1-MOCK 0.52 >More info 0.39 >More info WT-MOCK Original data GEO bulk
400 eif3h polysome 0.60 >More info 0.31 >More info WT polysome Original data GEO bulk
401 irradiated leaf (cmt 5d) 0.56 >More info 0.34 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
402 Seedling-HeatStressed POLYSOMESmRNA 0.56 >More info 0.34 >More info Seedling-control POLYSOMESmRNA seedling Original data
403 vte2 leaves 0h LT -0.56 >More info -0.34 >More info Col leaves 0h LT h 9-11th adult leaves Original data
404 IRP1-OE-Ctrl--shoot 0.53 >More info 0.37 >More info COL-0-Ctrl--shoot shoot Original data
405 root callus inducing medium 12 h -0.60 >More info -0.30 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
406 Kas-1 -Fe 48h -0.58 >More info -0.32 >More info Kas-1 +Fe 24h roots Original data GEO bulk
407 Kas -Fe 48h Roots -0.58 >More info -0.32 >More info Kas +Fe 24h Roots Original data GEO bulk
408 Heat shock 20%Inhibition 0.56 >More info 0.33 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
409 Col(gl) leaf 100mM NaCl -0.61 >More info -0.28 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
410 MYB29 OE 0.51 >More info 0.38 >More info WT for MYB29/76 Original data GEO bulk
411 C2 leaf-drought 0.52 >More info 0.37 >More info C2 leaf-well watered Original data GEO bulk
412 MPK6 ox Shoot Hypoxia 0.52 >More info 0.37 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
413 MYB76 OE 0.50 >More info 0.39 >More info WT for MYB29/76 Original data GEO bulk
414 Col(gl) 100mM NaCl -0.61 >More info -0.28 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
415 toc1-1-57hr 0.52 >More info 0.37 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
416 P.p 2.5hai 0.28 >More info 0.61 >More info At-Control roots Original data GEO bulk
417 naxillin 3h 0.38 >More info 0.51 >More info before treatment naxillin root Original data GEO bulk
418 downy mildew cotyledons late stage 0.69 >More info 0.20 >More info mock inoculated Cotyledons Original data GEO bulk
419 Te 1d 0.32 >More info 0.57 >More info Te CA Leaves Original data
420 ABA 0.5 h 0.55 >More info 0.33 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
421 IRP1-OE-Fe--root 0.53 >More info 0.35 >More info COL-0-Fe--root root Original data
422 21h-DC3000 hrpA -0.53 >More info -0.35 >More info 21h-DC3000 leaves Original data GEO bulk
423 4h decapitation 0.52 >More info 0.36 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
424 opr3 OPDA 2 h 0.26 >More info 0.62 >More info opr3 0 h Original data GEO bulk
425 D2O 0.57 >More info 0.31 >More info H2O seedling Original data GEO bulk
426 Bay-0-3h IAA -0.56 >More info -0.31 >More info Bay-0-0h IAA whole plant Original data GEO bulk
427 Seedling-HeatStressed TOTALmRNA 0.55 >More info 0.32 >More info Seedling-control TOTALmRNA seedling Original data
428 1hr-pH4.5 0.34 >More info 0.53 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
429 seedlings-week-old RECA1-overexpressing
transgenic		 0.31 >More info 0.56 >More info seedlings-week-old Col-0 seedlings Original data
430 Primisulfuron EC50 0.50 >More info 0.37 >More info Carrier (primisulfuron) Original data GEO bulk
431 stn7-1 -0.75 >More info -0.12 >More info Col-0 rosette leaves Original data GEO bulk
432 35S-MIF1 dark grown 0.59 >More info 0.28 >More info Dark-grown WT control Original data GEO bulk
433 root cells columella root cap -Fe 0.50 >More info 0.37 >More info whole roots standard Original data GEO bulk
434 +1.6 mM Tween 20 1 h. 0.37 >More info 0.50 >More info +distilled water 1 h. Original data GEO bulk
435 Atwrky63 -0.57 >More info -0.30 >More info Col0 none leaf Original data GEO bulk
436 upf1 0.52 >More info 0.34 >More info WT whole plant Original data GEO bulk
437 Elevated CO2 AMPLE N DAY 0.55 >More info 0.31 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
438 P.syringae vir 4 h (leaf) 0.68 >More info 0.18 >More info Mock 4 h (leaf) Original data Elicitor treatments
439 atmyc2 Seedling BL -0.18 >More info -0.68 >More info WT Seedling BL Original data GEO bulk
440 tunicamycin -0.36 >More info -0.50 >More info DMF Original data GEO bulk
441 Ws HS 0.54 >More info 0.31 >More info Ws control heat shocked seedling Original data GEO bulk
442 cpr5scv1 0.54 >More info 0.31 >More info WT(COL) Original data GEO bulk
443 P.p 10.5hai 0.30 >More info 0.55 >More info At-Control roots Original data GEO bulk
444 Col 3d 0.34 >More info 0.51 >More info Col CA Leaves Original data
445 WT cold 12 h 0.57 >More info 0.28 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
446 csn4-1 dark 0.63 >More info 0.22 >More info WT light Original data GEO bulk
447 WT in -N 0.52 >More info 0.32 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
448 WT light -0.55 >More info -0.29 >More info WT dark Original data GEO bulk
449 RGA-GR-DEX 0.29 >More info 0.55 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
450 rgs1+no sugars -0.29 >More info -0.55 >More info WT+no sugars rosette leaves Original data GEO bulk
451 GV3101 3hpi -0.57 >More info -0.27 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
452 ani1 T0.5 -0.24 >More info -0.60 >More info WT T0.5 root tissue Original data GEO bulk
453 phr1 Shoot-Pi -0.54 >More info -0.29 >More info WT Root-Pi shoots Original data GEO bulk
454 P35S:rGRF3 0.52 >More info 0.31 >More info WS Original data GEO bulk
455 Laer pretreat JA Flg22 2h 0.55 >More info 0.28 >More info Laer pretreat water control leaf discs Original data GEO bulk
456 root epidermis and lateral root cap 40 mM NaCl 0.51 >More info 0.32 >More info root epidermis and lateral root cap Original data GEO bulk
457 siliques AtHb1 control 0.31 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
458 Col-0 2HS 0.30 >More info 0.53 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
459 Elevated CO2 AMPLE N NIGHT 0.30 >More info 0.53 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
460 hst5 0.59 >More info 0.24 >More info Col-0 Original data GEO bulk
461 SHR-GR Time 1H Dex 0.57 >More info 0.26 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
462 35S:ATR1 like miR -0.57 >More info -0.26 >More info WT for miR Original data GEO bulk
463 penta MeJA 1h 0.63 >More info 0.19 >More info Laer MeJA 1h leaf discs Original data GEO bulk
464 lug3 flowers 0.55 >More info 0.27 >More info WT-flowers flowers Original data GEO bulk
465 msh1 recA3 heat shock 0.50 >More info 0.32 >More info WT heat shock above-ground parts Original data GEO bulk
466 Laer Pst DC3000 12hpi -0.54 >More info -0.28 >More info Laer Control leaf discs Original data GEO bulk
467 Heat shock 30%Inhibition 0.51 >More info 0.31 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
468 Col in Pi deficiency medium 0.16 >More info 0.66 >More info Col in control medium root Original data GEO bulk
469 seedlings +5AC 0.51 >More info 0.30 >More info control seedlings 10-day old whole seedling Original data GEO bulk
470 wrky33 mock 0.66 >More info 0.15 >More info WT mock 14 hour mock control leaves Original data
471 FLIGHT TAGESB plate 0.63 >More info 0.18 >More info GROUND CONTROL TAGESB plate Original data
472 GO5; 8h switch to ambient CO2 concentrations; 0.30 >More info 0.51 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
473 seedling -S Exp 0.57 >More info 0.24 >More info seedling FN Exp seedling Original data
474 Mutant lwd1_lwd2 0.53 >More info 0.27 >More info Wildtype for phy mutants Original data GEO bulk
475 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.53 >More info 0.27 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
476 myb50 xylem 0.50 >More info 0.30 >More info wt xylem xylem Original data GEO bulk
477 camta1 root water -0.50 >More info -0.30 >More info Col-0 root water root Original data GEO bulk
478 Laer MeJA 1h 0.51 >More info 0.29 >More info Laer Control leaf discs Original data GEO bulk
479 gpa1 +ABA GC -0.22 >More info -0.58 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
480 pistil 0.5HAP 0.62 >More info 0.17 >More info unpollinated pistil pistil Original data GEO bulk
481 E.orontii Infection 6 h -0.65 >More info -0.14 >More info Uninfection 6 h Original data Elicitor treatments
482 auxin and brassinazole seedlings 0.51 >More info 0.28 >More info auxin seedlings Original data GEO bulk
483 Leaf -0.55 >More info -0.23 >More info Control for tissue data leaf Original data GEO bulk
484 penta Flg22 1h 0.59 >More info 0.19 >More info Laer Flg22 1h leaf discs Original data GEO bulk
485 48 h S Attim 17-1 1 -0.54 >More info -0.23 >More info 0 h Attim 17-1 1 seed Original data
486 camta1 leaf drought -0.55 >More info -0.22 >More info Col-0 leaf drought leaf Original data GEO bulk
487 Col light-dark EtOH 0.56 >More info 0.21 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
488 mkk1/mkk2 control rep 0.51 >More info 0.26 >More info Col-0 Time 0 rep Original data GEO bulk
489 GST-overexpression seedlings control 0.62 >More info 0.15 >More info WT seedlings control Seedlings Original data
490 edr1 18 h powdery mildew 0.53 >More info 0.24 >More info Col-0 18 h powdery mildew Original data GEO bulk
491 FAMA induced 48h 0.54 >More info 0.22 >More info control 48h Whole seedling Original data GEO bulk
492 ML (Mature leaves) 35DAS -0.51 >More info -0.25 >More info Control for tissue data Original data GEO bulk
493 Expanding leaf -0.50 >More info -0.26 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
494 pnp1-1 3h -P 0.54 >More info 0.22 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
495 IAA/inhibitor B Treated 0.20 >More info 0.56 >More info IAA Treated Original data GEO bulk
496 ALC Toc1 light-dark Mock 0.52 >More info 0.23 >More info Col light-dark Mock no ethanol Original data GEO bulk
497 pnp1-1 1wk -P 0.59 >More info 0.16 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
498 Shoot P recovery 0.58 >More info 0.17 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
499 12h Col-0 0.50 >More info 0.25 >More info 00h Col-0 Original data GEO bulk
500 rosettes atx drought 0.57 >More info 0.18 >More info rosettes atx watered Original data GEO bulk
501 hsfa1 quadruple mutant 0.64 >More info 0.11 >More info WT (Col-0) whole seedling Original data GEO bulk
502 atmyc2 cop1 Seedling BL 0.53 >More info 0.22 >More info WT Seedling BL Original data GEO bulk
503 IAA7mII over-expressor IAA Treated 0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
504 WT NAA/flg 2h 0.23 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
505 desiccated mature pollen grains -0.09 >More info -0.66 >More info hydrated pollen grains Original data GEO bulk
506 WT cold 24h 0.50 >More info 0.24 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
507 bZIP1ko mutant N+Light+ 0.66 >More info 0.08 >More info WT-sib N+Light+ whole plant Original data GEO bulk
508 phr1 phl1 Shoot-Pi -0.51 >More info -0.23 >More info WT Shoot-Pi shoots Original data GEO bulk
509 scrm-D:mute 0.51 >More info 0.23 >More info Col-0 WT whole seedling Original data GEO bulk
510 long 14-degree- 0.51 >More info 0.23 >More info control long Original data GEO bulk
511 dcl1-7 0.56 >More info 0.18 >More info Ler Original data GEO bulk
512 CeO2 germinant -0.23 >More info -0.51 >More info Millipore Water germinant CeO2 seedling Original data
513 eds16 whole leaf 5dpi -0.50 >More info -0.23 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
514 Te 3d 0.21 >More info 0.52 >More info Te CA Leaves Original data
515 AsAKiin11 T3 -0.67 >More info -0.05 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
516 phyABDE Dark 0.57 >More info 0.15 >More info WT Dark Dark whole seedling Original data GEO bulk
517 penta Control 0.52 >More info 0.20 >More info Laer Control leaf discs Original data GEO bulk
518 cdpk6-yfp 0.52 >More info 0.20 >More info Kan seedlings Original data GEO bulk
519 WT cotyledons -0.52 >More info -0.20 >More info Control for tissue data cotyledons Original data
520 gul2-1 bri1-5 mutant 0.51 >More info 0.21 >More info WT 7 day-old whole seedlings Original data
521 SPT4-R3 seedlings0 DAS 0.54 >More info 0.17 >More info Col-0 seedlings0 DAS seedlings Original data
522 sid2 -0.50 >More info -0.21 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
523 pmr4-1 control 0.53 >More info 0.17 >More info WT control uninoculated Original data GEO bulk
524 AvrRpm1 2 h (leaf) 0.17 >More info 0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
525 6 h SL Attim 17-1 1 -0.51 >More info -0.19 >More info 0 h Attim 17-1 1 seed Original data
526 aln-1 0.69 >More info -0.00 >More info Col-0 Aerial part of seedlings Original data
527 SA 0.52 >More info 0.16 >More info WT mock Whole seedling Original data GEO bulk
528 hai1-2 0.51 >More info 0.17 >More info control control whole seedlings Original data GEO bulk
529 HairpinZ 4 h (leaf) 0.71 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
530 bri1-116 -0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
531 6 h SL WT -0.53 >More info -0.14 >More info 0 h WT seed Original data
532 Col-0 24hpi A. brassicicola 0.65 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
533 root - 08% oxygen - 30min 0.12 >More info 0.55 >More info root - 21% oxygen - 30min Original data GEO bulk
534 eif3h non-polysome 0.57 >More info 0.10 >More info WT non-polysome Original data GEO bulk
535 35S-GSH1 4C -0.12 >More info -0.54 >More info Col-0 4C seeds Original data GEO bulk
536 gpa1-4/agb1-2 ozone 2d -0.02 >More info -0.63 >More info Col ozone 2d ozone Original data GEO bulk
537 24h SL Attim 17-1 1 -0.50 >More info -0.14 >More info 0 h Attim 17-1 1 seed Original data
538 ATR1 OE -0.56 >More info -0.08 >More info WT for ATR1/MYB51 Original data GEO bulk
539 oligomycin 1 h 0.14 >More info 0.50 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
540 col-5 DC3000 4h 0.12 >More info 0.51 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
541 Col BTH -0.04 >More info 0.67 >More info Col rosettes Original data GEO bulk
542 Nicotinamide-89hr 0.50 >More info 0.12 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
543 tbf1-mock spray 0.52 >More info 0.10 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
544 vte2 leaves 120h LT 0.58 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
545 Ambient CO2 LIMITING N NIGHT -0.51 >More info -0.11 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
546 AsAKiin11 T1 -0.60 >More info -0.01 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
547 phyABCDE Dark 0.53 >More info 0.07 >More info WT Dark Dark whole seedling Original data GEO bulk
548 P. infestans 6 h (leaf) 0.75 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
549 AtMYB30-ox 2-4h Xanthomonas 0.53 >More info 0.06 >More info WT 2-4h Xanthomonas Original data GEO bulk
550 eif3h 0.56 >More info 0.03 >More info WT Original data GEO bulk
551 shoot control pSultr2:2 -0.56 >More info -0.03 >More info shoot control total Original data GEO bulk
552 swn-7 -0.55 >More info -0.04 >More info Col whole plant Original data GEO bulk
553 GRX-overexpression seedlings MV -0.62 >More info 0.03 >More info WT seedlings MV Seedlings Original data GEO bulk
554 Elevated CO2 LIMITING N DAY -0.04 >More info -0.54 >More info Elevated CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
555 Col PSTDC3000 24h 0.69 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
556 rao2 AntimycinA 3h -0.51 >More info -0.04 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
557 4C 1h -0.14 >More info 0.69 >More info 4C 0h Original data GEO bulk
558 Differentiation 24h -0.52 >More info -0.02 >More info Differentiation 0h leaves Original data
559 siliques WT hypoxia 0.52 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
560 WT salt 12 h 0.50 >More info 0.03 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
561 ex1 flu dark 8hours/30 minute light -0.04 >More info 0.57 >More info col dark 8hours/30 minute light Original data GEO bulk
562 seedling 1.5h after HZE WT 0.50 >More info 0.01 >More info seedling day 1 unirradiated WT 1.5h Original data
563 Differentiation 36h -0.53 >More info 0.02 >More info Differentiation 0h leaves Original data
564 Differentiation 48h -0.53 >More info 0.02 >More info Differentiation 0h leaves Original data
565 epiF3 -0.01 >More info 0.52 >More info WT Col-0 aerial part Original data
566 hy5 low light -0.52 >More info 0.02 >More info Col-O low light Original data GEO bulk
567 Mutant hy5 -0.52 >More info 0.02 >More info Col-0 Original data GEO bulk
568 seed germinating in countinuous light 24h SL -0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
569 dorn1-1 Root 100 mM ATP 30 min 0.05 >More info -0.54 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
570 35S:MYB28 like miR -0.54 >More info 0.06 >More info WT for miR Original data GEO bulk
571 rdr2-1 -0.53 >More info 0.05 >More info Col-0 Original data GEO bulk
572 CCA1-ox 6am non-polysomal -0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
573 phyB mutant 16C 10hrs -0.08 >More info 0.50 >More info 16C 10h whole plant excluding roots Original data GEO bulk
574 spx1 spx2 resupplied Pi 4h -0.64 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
575 Shoot apex inflorescence (after bolting) -0.25 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
576 eds16 whole leaf 7d UI -0.13 >More info 0.53 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
577 rdr1-1 -0.57 >More info 0.17 >More info Col-0 Original data GEO bulk
578 eds16 whole leaf 3dpi -0.18 >More info 0.54 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
579 FAMA induced 4h 0.50 >More info -0.16 >More info control 4h Whole seedling Original data GEO bulk
580 pad4-est1b-1-doublemutant 0.52 >More info -0.19 >More info pad4-mutant developed rosette leaves Original data GEO bulk
581 35S:RPS4 rrs1-11 24h -0.59 >More info 0.27 >More info 35S:RPS4 24h leaves Original data
582 sex4-3 -0.56 >More info 0.27 >More info Col-WT leaves Original data GEO bulk