4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT 3h -P
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List of experiments correlated with "WT 3h -P"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT 3h -P		 Correlation to
WT 3h -P		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT 3h -P 1.00 >More info 1.00 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
2 pnp1-1 3h +P 0.89 >More info 0.75 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
3 WT 2-4h Xanthomonas 0.83 >More info 0.76 >More info WT T0 Original data GEO bulk
4 UV Stress 24 h (shoot) 0.84 >More info 0.73 >More info Stress mock 24 h (shoot) Original data Stress treatments
5 ataf1-1 mutant Col-0 Bgh inoculated 0.82 >More info 0.68 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
6 cat2-2; 8h switch to ambient CO2 concentrations; 0.73 >More info 0.74 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
7 Leaf GLU1-KO 0.80 >More info 0.66 >More info Leaf Col(0) rosette leaves Original data GEO bulk
8 cpr5 0.78 >More info 0.68 >More info WT seedling Original data GEO bulk
9 WT Col-0 Bgh inoculated 0.79 >More info 0.66 >More info WT Col-0 Un-inoculated Original data GEO bulk
10 WT+H2O2 0.74 >More info 0.70 >More info WT H2O2 Original data GEO bulk
11 sid2-1 cold -0.77 >More info -0.66 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
12 aba3-1 0.69 >More info 0.74 >More info wt Original data GEO bulk
13 Mutant siz1-3 (Drought) 0.81 >More info 0.61 >More info Col-0 (Drought) Original data GEO bulk
14 siz1-3 drought 0.81 >More info 0.61 >More info Col-0 drought Original data GEO bulk
15 msh1 albino 0.79 >More info 0.62 >More info WT aerial part Original data GEO bulk
16 35S:RPS4 eds1-2 2h -0.74 >More info -0.67 >More info 35S:RPS4 2h leaves Original data
17 camta1/3 warm 0.87 >More info 0.54 >More info WT warm entire aerial part Original data GEO bulk
18 anac017-2 AntimycinA 3h -0.76 >More info -0.65 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
19 pho1 0.78 >More info 0.62 >More info Col2WT Original data GEO bulk
20 Elevated CO2 AMPLE N NIGHT 0.68 >More info 0.71 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
21 cpr5scv1 0.73 >More info 0.65 >More info WT(COL) Original data GEO bulk
22 dde2-2 9 hpi A. brassicicola 0.70 >More info 0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
23 Col ozone 3h 0.74 >More info 0.64 >More info Col clean-air 3h ozone Original data GEO bulk
24 seedlings-week-old RECA1-overexpressing
transgenic		 0.76 >More info 0.62 >More info seedlings-week-old Col-0 seedlings Original data
25 Col-Luc WT 3h antimycin A 0.79 >More info 0.59 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
26 cpr5npr1svi1 0.63 >More info 0.73 >More info WT(COL) Original data GEO bulk
27 WT+chitooctaose 0.73 >More info 0.63 >More info WT+water chitooctaose seedlings Original data GEO bulk
28 Col-0-avrB-6h 0.63 >More info 0.73 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
29 IMI 4mM 0.74 >More info 0.62 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
30 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.82 >More info 0.53 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
31 GA 0.67 >More info 0.68 >More info none GA Rosette Original data GEO bulk
32 WT 90-105 min Xanthomonas 0.66 >More info 0.69 >More info WT T0 Original data GEO bulk
33 coi1-16 ein2 sid2 ctrl -0.80 >More info -0.55 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
34 35S:RPS4 eds1-2 8h -0.73 >More info -0.62 >More info 35S:RPS4 8h leaves Original data
35 cpr5npr1 0.66 >More info 0.68 >More info WT(COL) Original data GEO bulk
36 Te ozone 0.81 >More info 0.53 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
37 del1-1 mutant 5d uninfected 0.70 >More info 0.64 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
38 WT seedlings NaCl -0.71 >More info -0.63 >More info WT seedlings control Seedlings Original data GEO bulk
39 inhibitor A Treated 0.71 >More info 0.63 >More info Negative Control Original data GEO bulk
40 mkk1/mkk2 control rep 0.69 >More info 0.65 >More info Col-0 Time 0 rep Original data GEO bulk
41 CT101 ozone 0.80 >More info 0.53 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
42 camta3-2 0.66 >More info 0.67 >More info WT Original data GEO bulk
43 CMP 4hr 0.80 >More info 0.53 >More info Acetone 4hr root Original data GEO bulk
44 Col whole leaf 7dpi 0.67 >More info 0.66 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
45 WT-NOCO2 INFECTED 0.74 >More info 0.59 >More info WT-MOCK Original data GEO bulk
46 flu over-tAPX 0.63 >More info 0.70 >More info WT Col Original data GEO bulk
47 anac017-1 H2O2 3h -0.75 >More info -0.57 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
48 gun1gun5 far-red pretreated -0.69 >More info -0.63 >More info WT far-red pretreated Original data GEO bulk
49 Col whole leaf 5dpi 0.75 >More info 0.57 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
50 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.76 >More info 0.55 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
51 Col-0 9 hpi A. brassicicola 0.72 >More info 0.59 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
52 Light 3day wt -0.65 >More info -0.66 >More info 0h wt Original data
53 mkk1/mkk2 24h BTH rep 0.72 >More info 0.59 >More info Col-0 24h BTH rep Original data GEO bulk
54 Shoot -Cs 0.52 >More info 0.78 >More info Control-shoot Original data GEO bulk
55 Mutant siz1-3 0.78 >More info 0.52 >More info Col-0 Original data GEO bulk
56 siz1-3 control 0.78 >More info 0.52 >More info Col-0 control Original data GEO bulk
57 Flagellin 4 h (leaf) 0.77 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
58 +1.6 mM Tween 20 1 h. 0.75 >More info 0.55 >More info +distilled water 1 h. Original data GEO bulk
59 flu 0.61 >More info 0.69 >More info WT Col Original data GEO bulk
60 Col-0 ozone 0.82 >More info 0.48 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
61 cs26 long day 0.72 >More info 0.58 >More info Leaves-WT-LD leaf Original data GEO bulk
62 irradiated leaf (WT 1d) 0.79 >More info 0.50 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
63 rsa3-1 Na 24h 0.63 >More info 0.66 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
64 E.coli TUV86 2 fliC 7h 0.71 >More info 0.58 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
65 seedlings protease IV 0.67 >More info 0.62 >More info seedlings nontreated control whole seedling Original data
66 5-Triiodobenzoic acid3 h 0.63 >More info 0.66 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
67 OE WRKY63.3 high light 0.73 >More info 0.56 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
68 camta3-1 0.72 >More info 0.56 >More info WT Original data GEO bulk
69 pnp1-1 1wk -P 0.82 >More info 0.46 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
70 WT chitooctaose 0.73 >More info 0.55 >More info WT water Original data GEO bulk
71 edr1 36 h powdery mildew 0.74 >More info 0.54 >More info Col-0 36 h powdery mildew Original data GEO bulk
72 npr1 sni1 brca2a SA -0.63 >More info -0.65 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
73 S15-118 0.71 >More info 0.57 >More info wt Original data GEO bulk
74 GST 4 h (leaf) 0.69 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
75 chito-octamer 0.72 >More info 0.55 >More info Col Mock Original data GEO bulk
76 WT-SA 0.72 >More info 0.55 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
77 camta1/2/3 warm 0.77 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
78 coi1-16 ein2 sid2 ozone 0.80 >More info 0.47 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
79 GO5; 8h switch to ambient CO2 concentrations; 0.69 >More info 0.58 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
80 CLO 4mM 0.68 >More info 0.58 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
81 mkk2 24h BTH rep 0.61 >More info 0.65 >More info Col-0 24h BTH rep Original data GEO bulk
82 pad4-PsmES4326-24hpi -0.81 >More info -0.45 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
83 R. solani AG8 0.70 >More info 0.56 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
84 Col-0 DCA 48h 0.59 >More info 0.67 >More info Col-0 MOCK 48h Original data GEO bulk
85 coi1-2 0.68 >More info 0.57 >More info Col-0 mock Whole seedling Original data GEO bulk
86 E.coli 0157 H7 7h 0.65 >More info 0.60 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
87 GST NPP1 4 h (leaf) 0.71 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
88 oas-a1.1 Cd 18h 0.67 >More info 0.58 >More info Cd 18h root Root Original data GEO bulk
89 ceh1 mutant 0.59 >More info 0.66 >More info Parent line Original data
90 vte2-1 3d vernalization 0.76 >More info 0.49 >More info WT 3d vernalization Original data GEO bulk
91 C24 ozone 0.77 >More info 0.48 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
92 CAX1/CAX3 mutant 0.75 >More info 0.50 >More info Col whole plant Original data GEO bulk
93 UV 0.75 >More info 0.50 >More info WT aerial region Original data GEO bulk
94 AgNO3 3 h 0.73 >More info 0.52 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
95 oligomycin 1 h 0.68 >More info 0.57 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
96 chito-tetramer 0.73 >More info 0.51 >More info Col Mock Original data GEO bulk
97 mbd4 mutant thaliana 10-day-old seedling 0.73 >More info 0.51 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
98 Selenate (root) 0.69 >More info 0.55 >More info Ws (root) Original data GEO bulk
99 4C 2h(SOIL) 0.63 >More info 0.61 >More info 4C 0h(SOIL) Original data GEO bulk
100 Root Selenate 0.69 >More info 0.55 >More info Root control 40 micromolar selenate Root Original data GEO bulk
101 smg7b-1 0.73 >More info 0.51 >More info WT whole plant Original data GEO bulk
102 bio4-1 mutant leaves 0.69 >More info 0.55 >More info WT leaves leaves Original data GEO bulk
103 nia1nia2noa1-2 0.67 >More info 0.57 >More info Col-0 whole seedlings Original data GEO bulk
104 Hydrogen Peroxide 500 uM 0.55 >More info 0.69 >More info Control RB and PER Hydrogen Peroxide Original data
105 ice1 control 0.73 >More info 0.50 >More info WT control Original data GEO bulk
106 WT +elf18 2h 0.71 >More info 0.52 >More info WT untreated elf18 Original data GEO bulk
107 Transgenic LEC2GR Seedling 1h Dex 0.64 >More info 0.59 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
108 mbd6 mutant thaliana 10-day-old seedling 0.70 >More info 0.53 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
109 cdpk6-yfp 0.71 >More info 0.52 >More info Kan seedlings Original data GEO bulk
110 Cycloheximide 3 h 0.70 >More info 0.53 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
111 pvip1 pvip2 0.69 >More info 0.54 >More info Col-0 whole rosettes Original data GEO bulk
112 pmr5 pmr6 0.68 >More info 0.54 >More info Col-0 Original data GEO bulk
113 plant (tga2-5-6) 4h phytoprostane A1 0.67 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
114 sid2 -0.61 >More info -0.61 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
115 A. thaliana-A. lyrata hybrid -0.62 >More info -0.60 >More info A. thaliana mature leaves before flowering Original data GEO bulk
116 pnp1-1 1wk +P 0.75 >More info 0.47 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
117 Elevated CO2 AMPLE N DAY 0.60 >More info 0.62 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
118 pepr1-1 Pepr2-3 +Pep2 2h -0.72 >More info -0.50 >More info WT +Pep2 2h Pep2 Original data GEO bulk
119 hrpA 7h 0.70 >More info 0.52 >More info Mock 7h hrpA Original data GEO bulk
120 Laer Alternaria 3dpi -0.58 >More info -0.63 >More info Laer Control leaf discs Original data GEO bulk
121 Col-0 INA 48h 0.64 >More info 0.57 >More info Col-0 MOCK 48h Original data GEO bulk
122 wavy 0.67 >More info 0.54 >More info WT Original data GEO bulk
123 Light 0.71 >More info 0.50 >More info Control Original data GEO bulk
124 WT +elf18 10h 0.72 >More info 0.49 >More info WT untreated elf18 Original data GEO bulk
125 sni1 0.58 >More info 0.63 >More info WT Original data GEO bulk
126 ppi2 0.69 >More info 0.52 >More info WT whole plant Original data GEO bulk
127 6h +Pi -0.68 >More info -0.53 >More info 6h -Pi root Original data GEO bulk
128 Lipopolysaccaride4 h (leaf) 0.63 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
129 tunicamycin -0.54 >More info -0.66 >More info DMF Original data GEO bulk
130 WT leaves - Fe 0.67 >More info 0.53 >More info WT leaves + Fe Leaves Original data GEO bulk
131 HopZ1a treated 0.55 >More info 0.65 >More info col Original data GEO bulk
132 wrky33 Bc inoculation 14h 0.78 >More info 0.42 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
133 AvrRpt2 Col-0 6hpi 0.62 >More info 0.58 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
134 camta2/3 warm 0.75 >More info 0.45 >More info WT warm entire aerial part Original data GEO bulk
135 WT Bc inoculation 14h 0.77 >More info 0.43 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
136 eds16 whole leaf 5dpi -0.70 >More info -0.50 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
137 9 hr Hypoxia 1 hr recovery Total RNA 0.74 >More info 0.46 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
138 WT powdery mildew 0.62 >More info 0.58 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
139 Col-0 C2H4 24h 0.72 >More info 0.48 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
140 Col leaves 48h LT 0.53 >More info 0.66 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
141 miR393 flg22 1h 0.64 >More info 0.55 >More info WT 0h Leaf tissue Original data GEO bulk
142 aba1 hypocotyl 0.59 >More info 0.60 >More info Ler hypocotyl hypocotyl Original data GEO bulk
143 col-5 hrpA 12h 0.59 >More info 0.60 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
144 Col0-PsmES4326-24hpi 0.58 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
145 35S::PI ap3-3 35S::AP-GR +DEX 0.51 >More info 0.67 >More info 0hr DEX Original data GEO bulk
146 1h +Pi -0.55 >More info -0.63 >More info 1h -Pi root Original data GEO bulk
147 P.syringae AvrRpt2 4 h (leaf) 0.65 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
148 pmr5 0.58 >More info 0.60 >More info Col-0 Original data GEO bulk
149 iron minus 24h -0.41 >More info -0.77 >More info iron +24h root Original data GEO bulk
150 Atwrky63 -0.84 >More info -0.33 >More info Col0 none leaf Original data GEO bulk
151 IAA/inhibitor A Treated 0.60 >More info 0.57 >More info IAA Treated Original data GEO bulk
152 Col(gl) 0mM NaCl 0.69 >More info 0.48 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
153 Col(gl) leaf 0mM NaCl 0.69 >More info 0.48 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
154 vtc1 (II) 0.65 >More info 0.52 >More info Col (II) rosette Original data GEO bulk
155 Homozygous-AtcesA4 -0.76 >More info -0.41 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
156 Cocultivation 8 hrs root 0.69 >More info 0.48 >More info Mock cocultivation 8 hrs root Root Original data
157 ein2-1 9 hpi A. brassicicola 0.61 >More info 0.55 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
158 albino Ds13-2198-1 -0.68 >More info -0.48 >More info control Original data GEO bulk
159 cpr5 0.52 >More info 0.64 >More info WT(COL) Original data GEO bulk
160 efr-1 +elf18 10h -0.61 >More info -0.55 >More info WT +elf18 10h elf18 Original data GEO bulk
161 safener treated 0.68 >More info 0.48 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
162 inhibitor B Treated 0.67 >More info 0.49 >More info Negative Control Original data GEO bulk
163 M6PR transgenic leaf 0mM NaCl 0.65 >More info 0.51 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
164 Col BTH 0.49 >More info 0.67 >More info Col rosettes Original data GEO bulk
165 Primisulfuron EC50 0.69 >More info 0.47 >More info Carrier (primisulfuron) Original data GEO bulk
166 Laer Flg22+GA 1h 0.71 >More info 0.45 >More info Laer Control leaf discs Original data GEO bulk
167 LTN008-2 aza-dc 0.74 >More info 0.42 >More info LTN012-2 Mock Original data
168 9 hr Hypoxia 1 hr recovery IP RNA 0.73 >More info 0.43 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
169 CMV-WT 0.65 >More info 0.50 >More info Mock-At Aerial tissues Original data GEO bulk
170 S58-2 0.62 >More info 0.53 >More info wt Original data GEO bulk
171 35S:RPS4 eds1-2 24h -0.70 >More info -0.45 >More info 35S:RPS4 24h leaves Original data
172 hrcC 0.61 >More info 0.54 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
173 FLIGHT TAGESB plate6 ROOTS 0.63 >More info 0.52 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
174 aba2 1% sucrose 12-day-old 0.64 >More info 0.51 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
175 INA 0.58 >More info 0.56 >More info CK INA seedling Original data
176 PNO8 3 h 0.63 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
177 BLM+INA 0.77 >More info 0.37 >More info CK BLM and INA seedling Original data
178 npr1 sni1 SA 0.59 >More info 0.55 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
179 nia1nia2 0.58 >More info 0.56 >More info Col-0 whole seedlings Original data GEO bulk
180 edr1 18 h powdery mildew 0.64 >More info 0.50 >More info Col-0 18 h powdery mildew Original data GEO bulk
181 Laer Flg22 1h 0.71 >More info 0.42 >More info Laer Control leaf discs Original data GEO bulk
182 Elevated CO2 fully expanded leaf 0.65 >More info 0.48 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
183 L2.5 mutant -0.65 >More info -0.48 >More info Wt Original data GEO bulk
184 Phytoprostane A1 4 h 0.56 >More info 0.57 >More info Col-0 Original data GEO bulk
185 ice1 6H Cold 0.57 >More info 0.56 >More info WT 6H Cold Original data GEO bulk
186 OH1 0.65 >More info 0.48 >More info Col-0 leaves Original data GEO bulk
187 ARR22-ox (t-zeatin 3 h) 0.74 >More info 0.39 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
188 flu dark 8hours/30 minute light 0.49 >More info 0.64 >More info col dark 8hours/30 minute light Original data GEO bulk
189 Dex-rga(delta17) 4h GA4 -0.65 >More info -0.47 >More info Vector 4h GA4 shoots Original data GEO bulk
190 Col-0 Flg22 4h 0.74 >More info 0.38 >More info Col-0 H2O 4h Original data GEO bulk
191 Fenclorim 4hr 0.65 >More info 0.47 >More info Acetone 4hr root Original data GEO bulk
192 Col-0 low oxygen 0.61 >More info 0.51 >More info Col-0 Original data GEO bulk
193 lht1 untreated 0.50 >More info 0.62 >More info WT untreated untreated leaf Original data GEO bulk
194 wnk8-1 untreated -0.52 >More info -0.60 >More info Col-0 untreated seedlings Original data GEO bulk
195 D2O 0.67 >More info 0.44 >More info H2O seedling Original data GEO bulk
196 Sulfometuron EC50 0.65 >More info 0.46 >More info Carrier Original data GEO bulk
197 irradiated leaf (cmt 1d) 0.61 >More info 0.50 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
198 IXB induced 0.59 >More info 0.52 >More info Methanol IXB Suspension cells Original data GEO bulk
199 miR393 flg22 2h 0.61 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
200 (Ws-2)+100 uM As 0.69 >More info 0.42 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
201 TNT-seedlings 0.72 >More info 0.39 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
202 35S::ERF104 Flg22 4h 0.69 >More info 0.42 >More info 35S::ERF104 H2O 4h Original data GEO bulk
203 AFB1 flg22 1h 0.64 >More info 0.47 >More info WT 0h Leaf tissue Original data GEO bulk
204 ice1 24H Cold 0.62 >More info 0.48 >More info WT 24H Cold Original data GEO bulk
205 Mutant ein2(leaf) -0.53 >More info -0.57 >More info Col-0 (leaf) Original data GEO bulk
206 Stem tissue 5 days NAA 0.52 >More info 0.58 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
207 hrpA fliC 7h 0.66 >More info 0.44 >More info Mock 7h hrpA fliC Original data GEO bulk
208 WT +Pep2 10h 0.76 >More info 0.34 >More info WT untreated Pep2 Original data GEO bulk
209 WT flg22 2h 0.61 >More info 0.49 >More info WT 0h Leaf tissue Original data GEO bulk
210 sid2-2 9 hpi A. brassicicola 0.67 >More info 0.43 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
211 petiole in D 0.55 >More info 0.54 >More info petiole in WL petioles Original data GEO bulk
212 Cor 10h 0.53 >More info 0.56 >More info Mock 10h Cor Original data GEO bulk
213 WT seedlings MV 0.51 >More info 0.58 >More info WT seedlings control Seedlings Original data GEO bulk
214 aerial organ callus inducing medium 12 h 0.60 >More info 0.49 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
215 ice1 3H Cold 0.59 >More info 0.50 >More info WT 3H Cold Original data GEO bulk
216 msh1 variegation Col-0 0.59 >More info 0.50 >More info WT Col-0 above ground part of plant Original data GEO bulk
217 WT 1wk -P 0.61 >More info 0.48 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
218 WT cold 0.52 >More info 0.57 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
219 WT flg22 1h 0.61 >More info 0.48 >More info WT 0h Leaf tissue Original data GEO bulk
220 WT +Pep2 2h 0.74 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
221 gpa1 -ABA GC -0.68 >More info -0.40 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
222 Mutant arf2-6 -0.57 >More info -0.51 >More info Col Original data GEO bulk
223 WT mitomycin C 0.62 >More info 0.46 >More info WT mock shoot apical meristem Original data
224 FAMA induced 4h -0.61 >More info -0.47 >More info control 4h Whole seedling Original data GEO bulk
225 (Col-0)+100 uM As 0.65 >More info 0.43 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
226 IAA/inhibitor B Treated 0.57 >More info 0.51 >More info IAA Treated Original data GEO bulk
227 mpk6-ko Flg22 4h 0.65 >More info 0.43 >More info mpk6-ko H2O 4h Original data GEO bulk
228 downy mildew cotyledons late stage 0.46 >More info 0.62 >More info mock inoculated Cotyledons Original data GEO bulk
229 rao2 H2O2 3h -0.46 >More info -0.62 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
230 pXVE:HA-EDM2-a untreated -0.52 >More info -0.55 >More info Col-0 untreated seedlings Original data GEO bulk
231 vtc2 (I) 0.64 >More info 0.43 >More info Col (I) rosette Original data GEO bulk
232 WT AntimycinA 3h 0.63 >More info 0.44 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
233 toc1-1-57hr 0.51 >More info 0.56 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
234 8hr-pH4.5 0.59 >More info 0.48 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
235 eds16 whole leaf 7dpi -0.69 >More info -0.38 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
236 bHLH122 ox -0.49 >More info -0.58 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
237 Rose Bengal 0.5 uM 0.48 >More info 0.59 >More info Control RB and PER Rose Bengal Original data
238 HARAP aerobic -0.63 >More info -0.43 >More info WT aerobic aerobic Original data GEO bulk
239 FOX line K19624 0.62 >More info 0.44 >More info empty vector control (T3) FOX lines Original data GEO bulk
240 Wounding Stress3 h (shoot) 0.49 >More info 0.57 >More info Stress mock 3 h (shoot) Original data Stress treatments
241 B.cinerea 18 h infection 0.42 >More info 0.64 >More info Mock 18 h Original data Botrytis cinerea infection
242 Botrytis cinerea 18h 0.42 >More info 0.64 >More info control 18h Original data GEO bulk
243 Mutant ufo-1(flower) 0.64 >More info 0.41 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
244 eds16 whole leaf 3dpi -0.71 >More info -0.34 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
245 amiRAP aerobic -0.64 >More info -0.41 >More info WT aerobic aerobic Original data GEO bulk
246 abi4-102 (II) 0.64 >More info 0.41 >More info Col (II) rosette Original data GEO bulk
247 gh3.5-1D 48 hpi 0.60 >More info 0.45 >More info Col-0 uninoculated Original data GEO bulk
248 (Col-0)+200 uM As 0.66 >More info 0.39 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
249 Triazolopyrimidine EC50 0.65 >More info 0.40 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
250 rosette Light Wounded 0.41 >More info 0.64 >More info rosette Light Control Original data GEO bulk
251 Whole root - low pH 12H 0.57 >More info 0.48 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
252 phyB mutant 22C 10hrs -0.57 >More info -0.48 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
253 oligomycin 4 h 0.58 >More info 0.46 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
254 pepr1-1 Pepr2-3 +Pep2 10h -0.62 >More info -0.42 >More info WT +Pep2 10h Pep2 Original data GEO bulk
255 4tga safener -0.51 >More info -0.53 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
256 cop1 Seedling BL 0.64 >More info 0.40 >More info WT Seedling BL Original data GEO bulk
257 ein2 1% sucrose 14-day-old -0.57 >More info -0.47 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
258 sng1 0.60 >More info 0.44 >More info WT aerial region Original data GEO bulk
259 wnk8-2 untreated -0.57 >More info -0.47 >More info Col-0 untreated seedlings Original data GEO bulk
260 Total RNA 35S:HF-RPL18 0.48 >More info 0.56 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
261 Col upon hypoxia 6 hrs 0.62 >More info 0.41 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
262 SA 0.60 >More info 0.43 >More info WT mock Whole seedling Original data GEO bulk
263 ein5-1 ski2-3 0.58 >More info 0.45 >More info Col-0 aerial tissue Original data
264 ckh1 CK200 0.69 >More info 0.34 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
265 gun1gun5 drak pretreated -0.55 >More info -0.48 >More info WT drak pretreated Original data GEO bulk
266 Whole root - low pH 1H 0.50 >More info 0.53 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
267 Laer treat paclobutrazol (PAC) 0.53 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
268 toc1-1-49hr 0.45 >More info 0.58 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
269 WT-Dry 0.46 >More info 0.57 >More info WT-CK dehydration treatment 1h Original data
270 Elevated CO2 leaf primordia 0.43 >More info 0.60 >More info Ambient CO2 leaf primordia leaf primordia Original data
271 shoots bhlh100/101 0uM Fe 0.56 >More info 0.46 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
272 WT NAA/flg 1h 0.57 >More info 0.45 >More info WT 0h Leaf tissue Original data GEO bulk
273 Bur-0-3h IAA 0.60 >More info 0.42 >More info Bur-0h IAA whole plant Original data GEO bulk
274 aerial organ callus inducing medium 24h 0.60 >More info 0.42 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
275 Mutant NahG(leaf) -0.53 >More info -0.49 >More info Col-0 (leaf) Original data GEO bulk
276 CMP 24hr 0.61 >More info 0.41 >More info Acetone 24hr root Original data GEO bulk
277 Col-0 SA 0.48 >More info 0.54 >More info Col-0 Original data GEO bulk
278 hst5 0.55 >More info 0.46 >More info Col-0 Original data GEO bulk
279 sta1 0.67 >More info 0.34 >More info WT Original data GEO bulk
280 20d after anthesis 0.68 >More info 0.33 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
281 rosette leaves fdh 0.52 >More info 0.49 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
282 AFB1 flg22 2h 0.61 >More info 0.40 >More info WT 0h Leaf tissue Original data GEO bulk
283 camta1/2/3 24h cold 0.53 >More info 0.48 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
284 cs26 short-day -0.63 >More info -0.38 >More info Leaves-WT-SD leaf Original data GEO bulk
285 root Dosed gold 0.55 >More info 0.46 >More info root No gold .125 mM gold 24 h roots Original data
286 Col-0 INA 6d 0.70 >More info 0.31 >More info Col-0 MOCK 6d Original data GEO bulk
287 DFPM 0.58 >More info 0.43 >More info control Original data GEO bulk
288 IRP1-OE-Ctrl--root 0.58 >More info 0.43 >More info COL-0-Ctrl--root root Original data
289 C24-3h IAA 0.67 >More info 0.34 >More info C24-0h IAA whole plant Original data GEO bulk
290 0.125 mM gold 24 h 0.55 >More info 0.46 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
291 gai Control 0.43 >More info 0.58 >More info Laer Control leaf discs Original data GEO bulk
292 leaf blade in D 0.49 >More info 0.52 >More info leaf blade in WL leaf blades Original data GEO bulk
293 SLWF infested 0.47 >More info 0.54 >More info SLWF uninfested rosette tissue Original data GEO bulk
294 ORS1 induced 0.68 >More info 0.32 >More info mock-induced rosette leaves Original data GEO bulk
295 Homozygous-AtcesA6 -0.67 >More info -0.33 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
296 HARAP hypoxic 0.60 >More info 0.40 >More info hypoxic hypoxia Original data GEO bulk
297 rcf1-1 cold 12h 0.56 >More info 0.44 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
298 SA 4mM 0.57 >More info 0.43 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
299 rosette Dark Wounded 0.45 >More info 0.55 >More info rosette Dark Control Original data GEO bulk
300 Imidazolinone EC50 0.46 >More info 0.54 >More info Carrier (Imidazolinone) Original data GEO bulk
301 Glyphosate EC50 0.37 >More info 0.63 >More info Carrier (Glyphosate) Original data GEO bulk
302 Chitin 0.64 >More info 0.35 >More info Col C Original data GEO bulk
303 AtLysM RLK1 mutant chitooctaose -0.67 >More info -0.32 >More info WT chitooctaose Original data GEO bulk
304 WUSp cells 0.56 >More info 0.43 >More info Protoplast Induced Original data GEO bulk
305 ubc13A-es -0.70 >More info -0.29 >More info Col-es root Original data GEO bulk
306 abi4 vtc2 (I) 0.56 >More info 0.43 >More info Col (I) rosette Original data GEO bulk
307 lht1 PstDC3000 48h 0.47 >More info 0.52 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
308 max4 hypocotyl 0.56 >More info 0.42 >More info wt hypocotyl hypocotyl Original data GEO bulk
309 WT in -N 0.59 >More info 0.39 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
310 seedling 24h after Gamma atm-1 0.54 >More info 0.44 >More info seedling day 2 unirradiated atm-1 24h Original data
311 bZIP1ko mutant N+Light- 0.54 >More info 0.44 >More info WT-sib N+Light- whole plant Original data GEO bulk
312 6-trichlorophenoxyacetic acid 3 h 0.46 >More info 0.52 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
313 amiR-tor induced 3d 0.48 >More info 0.50 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
314 mil4 BTH 0.41 >More info 0.57 >More info Col BTH rosettes Original data GEO bulk
315 Seedling KUA1-IOX est 0.48 >More info 0.50 >More info Seedling KUA1-IOX mock Original data
316 toc1-1-65hr 0.69 >More info 0.28 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
317 CMV-A2b mutant 0.51 >More info 0.46 >More info Mock-At Aerial tissues Original data GEO bulk
318 ex2 flu dark 8hours/30 minute light 0.63 >More info 0.34 >More info col dark 8hours/30 minute light Original data GEO bulk
319 Tsu -Fe 24h Roots 0.62 >More info 0.35 >More info Tsu +Fe 24h Roots Original data GEO bulk
320 WT 30μM arsenate 8 hours. 0.57 >More info 0.40 >More info WT control (not supplemented). Original data
321 Tsu-1 -Fe 24h 0.62 >More info 0.35 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
322 expressing C2 MeJA -0.56 >More info -0.41 >More info LUC2T Original data GEO bulk
323 Stem tissue 2 days NAA 0.36 >More info 0.61 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
324 nhx5-1/nhx6 -0.43 >More info -0.54 >More info WT Rosette leaf Original data GEO bulk
325 col-5 hrpA 4h 0.44 >More info 0.53 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
326 gai MeJA 1h -0.62 >More info -0.34 >More info Laer MeJA 1h leaf discs Original data GEO bulk
327 hira-root -0.54 >More info -0.42 >More info WT-root root Original data
328 total mRNA eif3k 0.75 >More info 0.21 >More info total mRNA WT aerial part Original data GEO bulk
329 auxin and brassinazole seedlings 0.61 >More info 0.35 >More info auxin seedlings Original data GEO bulk
330 TA induced 0.53 >More info 0.43 >More info Methanol TA Suspension cells Original data GEO bulk
331 Col ozone 2d 0.54 >More info 0.42 >More info Col clean-air 2d ozone Original data GEO bulk
332 Laer Flg22 2h 0.65 >More info 0.31 >More info Laer Control leaf discs Original data GEO bulk
333 Laer Pst DC3000 12hpi -0.52 >More info -0.44 >More info Laer Control leaf discs Original data GEO bulk
334 gh3.5D uninoculated -0.54 >More info -0.42 >More info Col-0 48 hpi Original data GEO bulk
335 HopZ1a treated ulp1c ulp1d 0.39 >More info 0.57 >More info col Original data GEO bulk
336 abi1 hypocotyl 0.42 >More info 0.54 >More info Ler hypocotyl hypocotyl Original data GEO bulk
337 bio4-1 mutant watered00µM biotin leaves -0.55 >More info -0.40 >More info bio4-1 mutant leaves leaves Original data GEO bulk
338 rosette leaves lcr 0.39 >More info 0.56 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
339 sicy-192 gun1-101 cotyledons 0.40 >More info 0.55 >More info WT cotyledons cotyledons Original data
340 NAA 3h 0.60 >More info 0.35 >More info before treatment NAA root Original data GEO bulk
341 csn3-1 light 0.58 >More info 0.37 >More info WT light Original data GEO bulk
342 aerial organ callus inducing medium 48 h 0.59 >More info 0.36 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
343 csn5 (csn5a-2 csn5b) light 0.53 >More info 0.42 >More info WT light Original data GEO bulk
344 npr1-3 DCA 48h 0.37 >More info 0.58 >More info npr1-3 MOCK 48h Original data GEO bulk
345 NJ15 0.26 >More info 0.68 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
346 Dex-rga(delta17) 4h GA4+DEX -0.60 >More info -0.34 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
347 PstDC3000 48h 0.51 >More info 0.43 >More info WT untreated 48hr leaf Original data GEO bulk
348 gir flower 33d 0.61 >More info 0.33 >More info Col-7 flower 33d flower Original data GEO bulk
349 Bur-0-1h IAA 0.59 >More info 0.35 >More info Bur-0h IAA whole plant Original data GEO bulk
350 tt4 0.34 >More info 0.60 >More info Col-0 aerial part Original data
351 MYB12OX 0.41 >More info 0.53 >More info Col-0 aerial part Original data
352 upf1 0.66 >More info 0.27 >More info WT whole plant Original data GEO bulk
353 tga2 tga5 tga6 ctrl -0.77 >More info -0.16 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
354 Cor hrpS 10h 0.68 >More info 0.25 >More info Mock 10h Cor hrpS Original data GEO bulk
355 Col leaf 100mM NaCl 0.39 >More info 0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
356 Col leaf 100mM NaCl 0.39 >More info 0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
357 Col 100mM NaCl 0.39 >More info 0.54 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
358 npr1 sni1 ssn2 SA -0.57 >More info -0.36 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
359 Laer Flg22+GA 2h 0.61 >More info 0.32 >More info Laer Control leaf discs Original data GEO bulk
360 35:SUB1A 0.61 >More info 0.32 >More info WT whole seedling Original data GEO bulk
361 OsSAP11 expressing -0.52 >More info -0.41 >More info WT seedlings Original data GEO bulk
362 Phaseolicola 2 h (leaf) 0.42 >More info 0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
363 Laer pretreat GA Flg22 1h 0.22 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
364 Cd 24h root -0.42 >More info -0.51 >More info WT-Untreated Shoot Original data GEO bulk
365 gacA 0.67 >More info 0.25 >More info PA14 seedlings Original data GEO bulk
366 M6PR transgenic leaf 100mM NaCl -0.52 >More info -0.40 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
367 Shoot -K 0.55 >More info 0.37 >More info Control-shoot Original data GEO bulk
368 K starvation (shoot) 0.55 >More info 0.37 >More info Ws (shoot) Original data GEO bulk
369 Heat shock optimum 0.27 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
370 seedlings +5AC 0.61 >More info 0.31 >More info control seedlings 10-day old whole seedling Original data GEO bulk
371 35S::ERF104 H2O 4h 0.70 >More info 0.22 >More info Col-0 H2O 4h Original data GEO bulk
372 MPK6 ox Shoot Hypoxia 0.51 >More info 0.41 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
373 shoots bhlh100/101 100uM Fe 0.73 >More info 0.19 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
374 seedling 24h after HZE WT 0.68 >More info 0.23 >More info seedling day 2 unirradiated WT 24h Original data
375 Nicotinamide-57hr 0.55 >More info 0.36 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
376 Protoplast Induced 0.40 >More info 0.51 >More info Uninduced Original data GEO bulk
377 calcicole ecotype Cal-0 0.73 >More info 0.18 >More info Col-4 1 mM CaCl2 Original data GEO bulk
378 ein2-1 +Pep2 2h -0.57 >More info -0.34 >More info WT +Pep2 2h Pep2 Original data GEO bulk
379 S14-150 0.52 >More info 0.38 >More info wt Original data GEO bulk
380 M6PR transgenic 0mM NaCl 0.55 >More info 0.35 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
381 rdo3 siliques 0.53 >More info 0.37 >More info WT Ler siliques Original data GEO bulk
382 Nicotinamide-53hr 0.40 >More info 0.50 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
383 Kas-1 -Fe 24h -0.40 >More info -0.50 >More info Kas-1 +Fe 24h roots Original data GEO bulk
384 Kas -Fe 24h Roots -0.40 >More info -0.50 >More info Kas +Fe 24h Roots Original data GEO bulk
385 Rsch 8h 0.36 >More info 0.54 >More info Rsch CA Leaves Original data
386 ataf1-1 mutant Col-0 Un-inoculated -0.59 >More info -0.31 >More info WT Col-0 Un-inoculated Original data GEO bulk
387 Mutant cry1 -0.58 >More info -0.32 >More info Col-0 Original data GEO bulk
388 DUO1 induced 12h -0.69 >More info -0.21 >More info 12hr-not-induced whole plant Original data GEO bulk
389 seedling 1.5h after Gamma WT 0.58 >More info 0.32 >More info seedling day 1 unirradiated WT 1.5h Original data
390 cry1 low light -0.58 >More info -0.32 >More info Col-O low light Original data GEO bulk
391 Cor 24h 0.63 >More info 0.26 >More info Mock 24h Cor Original data GEO bulk
392 CLV3p cells 0.53 >More info 0.36 >More info Protoplast Induced Original data GEO bulk
393 atgsnor1-3-avrB-6h 0.52 >More info 0.37 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
394 dcl1-7 0.53 >More info 0.36 >More info Ler Original data GEO bulk
395 aerial organ callus inducing medium 96 h 0.52 >More info 0.37 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
396 8h-DC3000 avrRpm1 0.57 >More info 0.32 >More info 8h-DC3000 leaves Original data GEO bulk
397 oas-a1.1 shoot -0.70 >More info -0.19 >More info WT-Untreated Shoot Original data GEO bulk
398 myb61 cork 0.32 >More info 0.57 >More info wt cork cork Original data GEO bulk
399 E2Fa-Dpa 0.61 >More info 0.27 >More info WT Original data GEO bulk
400 P.p 30hai 0.51 >More info 0.37 >More info At-Control roots Original data GEO bulk
401 Laer pretreat JA Flg22 1h 0.53 >More info 0.34 >More info Laer pretreat water control leaf discs Original data GEO bulk
402 cat2-hCO2 -0.53 >More info -0.34 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
403 Whole root - S 3H 0.55 >More info 0.32 >More info Whole root - S 0H Original data GEO bulk
404 1h light (+Lincomycin) 0.51 >More info 0.36 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
405 Dark 40min pls UV-AB 5min 0.62 >More info 0.25 >More info Dark 45 min Original data Light treatments
406 C24 UV1 -0.70 >More info -0.17 >More info C24 mock UV seedling Original data
407 siliques AtHb1 control 0.35 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
408 Col-0 48 hpi 0.57 >More info 0.30 >More info Col-0 uninoculated Original data GEO bulk
409 9 hr Hypoxia IP RNA 0.56 >More info 0.30 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
410 shoots WT 0uM Fe 0.55 >More info 0.31 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
411 vtc2-1 -0.54 >More info -0.32 >More info Col-0 whole plant Original data GEO bulk
412 npr1-PsmES4326-24hpi -0.54 >More info -0.32 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
413 dense canopy 0.54 >More info 0.32 >More info single (control) petiole Original data GEO bulk
414 GiantCell Root -0.56 >More info -0.30 >More info Control Root laser captured giant cells Original data GEO bulk
415 seedling 12h after HZE WT 0.51 >More info 0.35 >More info seedling day 1 unirradiated WT 12h Original data
416 P35S:rGRF3 0.59 >More info 0.27 >More info WS Original data GEO bulk
417 pmr4-1 powdery mildew 0.35 >More info 0.51 >More info WT powdery mildew uninoculated Original data GEO bulk
418 IRP1-OE-Fe--shoot 0.36 >More info 0.50 >More info COL-0-Fe--shoot shoot Original data
419 Kas-1 -Fe 48h -0.57 >More info -0.29 >More info Kas-1 +Fe 24h roots Original data GEO bulk
420 Kas -Fe 48h Roots -0.57 >More info -0.29 >More info Kas +Fe 24h Roots Original data GEO bulk
421 root longitudinal zone-1 -Fe -0.29 >More info -0.57 >More info root longitudinal zone-1 standard Original data GEO bulk
422 sdg2 0.52 >More info 0.33 >More info wt seedling Original data GEO bulk
423 ani1 T16 -0.67 >More info -0.18 >More info WT T16 root tissue Original data GEO bulk
424 Dex-rga(delta17) 2h GA4+DEX -0.61 >More info -0.24 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
425 P.p 6hai 0.51 >More info 0.33 >More info At-Control roots Original data GEO bulk
426 Mutant ag-12(flower) 0.53 >More info 0.31 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
427 SCR-GR Time 12H Dex 0.64 >More info 0.20 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
428 cell culture 4 h phytoprostane A1 0.50 >More info 0.34 >More info cell culture 4 h control Original data GEO bulk
429 sav1-1 shade 0.56 >More info 0.28 >More info Col-0 shade seedlings Original data GEO bulk
430 naxillin 3h 0.52 >More info 0.32 >More info before treatment naxillin root Original data GEO bulk
431 nas4x leaves + Fe 0.52 >More info 0.32 >More info WT leaves + Fe Leaves Original data GEO bulk
432 atmospheric CO2 low Mg shoot 0.53 >More info 0.31 >More info atmospheric CO2 normal Mg shoot Shoot Original data
433 seed germinating in countinuous light 24h SL 0.17 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
434 4C 1h 0.33 >More info 0.51 >More info 4C 0h Original data GEO bulk
435 Kas2 roots 2hr KNO3 nitrogen 0.60 >More info 0.24 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
436 rpl24 total 0.60 >More info 0.24 >More info WT total seedling shoot/aerial seedling Original data
437 Aerobic prt6 0.60 >More info 0.24 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
438 phr1 Root-Pi 0.56 >More info 0.27 >More info WT Root+Pi roots Original data GEO bulk
439 OE WRKY40.4 -0.61 >More info -0.22 >More info OE WRKY40.4 none leaf Original data GEO bulk
440 Mature callus 0.50 >More info 0.32 >More info Young callus hypocotyls Original data GEO bulk
441 -Sulfate 2 h 0.56 >More info 0.26 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
442 Col-0-3h IAA 0.56 >More info 0.26 >More info Col-0-0h IAA whole plant Original data GEO bulk
443 FILp cells 0.52 >More info 0.30 >More info Protoplast Induced Original data GEO bulk
444 Col in Pi deficiency medium 0.20 >More info 0.62 >More info Col in control medium root Original data GEO bulk
445 Col-0 V. longisporum-inoculated 48 hpi 0.57 >More info 0.25 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
446 Mutant coi1(leaf) -0.60 >More info -0.22 >More info Col-0 (leaf) Original data GEO bulk
447 rcf1-1 cold 24h 0.67 >More info 0.14 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
448 Col-0 wt Hypoxic 0.54 >More info 0.27 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
449 root hypoxia total 0.52 >More info 0.29 >More info root control total Original data GEO bulk
450 ACC 3 h 0.57 >More info 0.24 >More info Mock 3 h Original data Basic hormone treatment of seedlings
451 3.5h KNO3 Whole root 0.50 >More info 0.30 >More info 3.5h KCl control Whole root Whole root Original data GEO bulk
452 irradiated leaf (cmt 5d) 0.50 >More info 0.30 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
453 ein2-PsmES4326-24hpi -0.56 >More info -0.24 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
454 pap1-D/tt4 0.30 >More info 0.50 >More info Col-0 aerial part Original data
455 erf104-ko H2O 4h 0.57 >More info 0.23 >More info Col-0 H2O 4h Original data GEO bulk
456 Dex-rga(delta17) 2h GA4 -0.59 >More info -0.21 >More info Vector 4h GA4 shoots Original data GEO bulk
457 axr1 hypocotyl 0.50 >More info 0.29 >More info wt hypocotyl hypocotyl Original data GEO bulk
458 psae1-3 stn7-1 0.59 >More info 0.20 >More info WS rosette leaves Original data GEO bulk
459 Col-0-1h IAA 0.50 >More info 0.29 >More info Col-0-0h IAA whole plant Original data GEO bulk
460 Polysomal RNA 35S:HF-RPL18 0.52 >More info 0.27 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
461 Nicotinamide-65hr 0.52 >More info 0.27 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
462 mp-B4149 mutant IAA -0.52 >More info -0.27 >More info GR-bdl IAA Original data GEO bulk
463 GO5; harvested 8h continiously maintained in high
CO2;		 0.27 >More info 0.52 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
464 sav1-1 light 0.52 >More info 0.26 >More info Col-0 light seedlings Original data GEO bulk
465 Truncated AC2 T2 -0.63 >More info -0.15 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
466 FLIGHT TAGESB plate6 SHOOTS 0.58 >More info 0.20 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
467 C24 24h cold -0.53 >More info -0.25 >More info Col 24h cold leaf Original data GEO bulk
468 spx1 spx2 complete 0.51 >More info 0.26 >More info WT complete seedlings Original data
469 Hypoxic prt6 0.54 >More info 0.23 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
470 Norflurazon 0.17 >More info 0.60 >More info Col-0 Original data GEO bulk
471 Norflurazon 0.17 >More info 0.60 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
472 gis5 seedlings 0.54 >More info 0.22 >More info WT seedlings Whole seedlings (leaves + roots) Original data
473 9 hr Hypoxia Total RNA 0.51 >More info 0.25 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
474 prmt5-5 -0.60 >More info -0.16 >More info WT Col continuous light Aerial tissue Original data GEO bulk
475 IAA7mII over-expressor IAA Treated 0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
476 Leafminer damaged seedlings 0.20 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
477 Rsch 3d 0.20 >More info 0.56 >More info Rsch CA Leaves Original data
478 gun1-1 +lincomycin -0.58 >More info -0.17 >More info Col-0 +lincomycin Original data GEO bulk
479 root longitudinal zone-2 pH 4.6 0.52 >More info 0.22 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
480 endosperm ABA -0.61 >More info -0.13 >More info endosperm-control ABA endosperm Original data GEO bulk
481 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.75 >More info 0.01 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
482 toc1-1-53hr 0.56 >More info 0.17 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
483 mature endodermis glcal 0.54 >More info 0.19 >More info Control for tissue data endodermis Original data GEO bulk
484 HairpinZ 4 h (leaf) 0.76 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
485 Roots Cd -0.65 >More info -0.08 >More info Roots control Cd Root Original data GEO bulk
486 8-DAC chr11-1chr17-1 0.51 >More info 0.22 >More info 8-DAC Col-0 leaf explants Original data
487 pvip1 pvip2 seedling 0.75 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
488 ein2-1 24hpi A. brassicicola -0.54 >More info -0.19 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
489 miR393 0h -0.22 >More info -0.51 >More info WT 0h Leaf tissue Original data GEO bulk
490 Uniconazole 3 h 0.55 >More info 0.17 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
491 AFB1 0h 0.55 >More info 0.17 >More info WT 0h Leaf tissue Original data GEO bulk
492 Hypoxic e1 ate 0.56 >More info 0.16 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
493 Col-0 2h NAA 0.58 >More info 0.14 >More info Col-0 6h MOCK Original data GEO bulk
494 seedling 3h after Gamma WT 0.71 >More info 0.01 >More info seedling day 1 unirradiated WT 3h Original data
495 DUO1 induced 6h -0.58 >More info -0.14 >More info 6hr-not-induced whole plant Original data GEO bulk
496 Control KNO3 roots - 2days -0.57 >More info -0.15 >More info Control KCl roots - 2days 5mM KNO3 on both sides for 2 days roots Original data GEO bulk
497 Red/FR Light45min 0.01 >More info 0.71 >More info FarRed Light 45min Original data Light treatments
498 iron minus 6 h -0.21 >More info -0.51 >More info iron +6 h root Original data GEO bulk
499 grf1/grf2/grf3 0.54 >More info 0.17 >More info WS Original data GEO bulk
500 rosettes drought -0.50 >More info -0.21 >More info rosettes watered Original data GEO bulk
501 eds16 whole leaf 6hpi -0.60 >More info -0.11 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
502 cngc19 0.57 >More info 0.14 >More info Col-0 root Original data GEO bulk
503 del1-1 5dpi 0.54 >More info 0.16 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
504 FarRed Light 45min -0.05 >More info -0.65 >More info White Light 45min Original data Light treatments
505 OE WRKY40.4 high light 0.19 >More info 0.51 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
506 root cells stele -Fe 0.53 >More info 0.16 >More info whole roots standard Original data GEO bulk
507 ein3-1eil1-1 dark -0.52 >More info -0.17 >More info Wt dark whole 4-day old etiolated seedlings Original data GEO bulk
508 npr1-3 MOCK 48h -0.11 >More info -0.58 >More info Col-0 MOCK 48h Original data GEO bulk
509 T6 leaf-drought -0.52 >More info -0.16 >More info T6 leaf-well watered Original data GEO bulk
510 endosperm paclobutrazol -0.53 >More info -0.15 >More info endosperm-control paclobutrazol endosperm Original data GEO bulk
511 sps1 -0.53 >More info -0.15 >More info WT seedling Original data GEO bulk
512 nd-1 V. longisporum-inoculated 48 hpi -0.50 >More info -0.18 >More info Col-0 V. longisporum-inoculated 48 hpi Pool of >50 individual roots Original data
513 Cold Stress 24 h (root) 0.50 >More info 0.18 >More info Stress mock 24 h (root) Original data Stress treatments
514 bri1-116 -0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
515 24h volatiles Sm. R3089 -0.67 >More info -0.00 >More info 24h untreated whole seedling Original data GEO bulk
516 long 17-degree- 0.16 >More info 0.51 >More info control long Original data GEO bulk
517 oas-a1.1 Cd 24h 0.12 >More info 0.55 >More info Cd 24h root Shoot Original data GEO bulk
518 seedling 6h after Gamma WT 0.71 >More info -0.04 >More info seedling day 1 unirradiated WT 6h Original data
519 Elevated CO2 expanding leaf 0.69 >More info -0.02 >More info Ambient CO2 expanding leaf expanding leaf Original data
520 AtMYB30-as 90-105 min Xanthomonas 0.61 >More info 0.05 >More info WT 90-105 min Xanthomonas Original data GEO bulk
521 anti-sense for AtAOX1a 0.56 >More info 0.10 >More info WT Original data GEO bulk
522 atsf1-2 mutant seedling 0.16 >More info 0.50 >More info Col-0 seedling seedlings Original data
523 phyB mutant 16C 4hrs 0.55 >More info 0.10 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
524 Shoot apex inflorescence (after bolting) -0.00 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
525 glk1 glk2 GLK1-GR +DEX 24h -0.59 >More info -0.06 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
526 cat2-long-day 4d 0.08 >More info 0.57 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
527 SHR-GR Time 1H Dex 0.66 >More info -0.02 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
528 toc1-1-69hr 0.56 >More info 0.08 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
529 whole roots -Fe 48 hour 0.50 >More info 0.14 >More info whole roots standard Original data GEO bulk
530 nas4x roots - Fe -0.55 >More info -0.08 >More info WT roots - Fe Roots Original data GEO bulk
531 seedling 3h after HZE WT 0.60 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
532 control leaf (cmt 5d) -0.54 >More info -0.08 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
533 wermyb2 0.54 >More info 0.07 >More info Col Original data GEO bulk
534 Ler hypocotyl 0.51 >More info 0.10 >More info wt hypocotyl hypocotyl Original data GEO bulk
535 AFB1 0h 0.50 >More info 0.10 >More info Col 0h Leaf Original data GEO bulk
536 penta MeJA 1h 0.67 >More info -0.08 >More info Laer MeJA 1h leaf discs Original data GEO bulk
537 atgsnor1-1 -0.62 >More info 0.04 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
538 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.54 >More info -0.03 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
539 F1 whole seedlings root 0.66 >More info -0.09 >More info Col whole seedlings root Seedlings Original data GEO bulk
540 ddm1 F6 inflorescence 0.54 >More info 0.03 >More info wt Col inflorescence unopened flower buds Original data
541 Mutant iaa17-6 (IAA) 0.50 >More info 0.07 >More info Col (IAA) Original data GEO bulk
542 ahg1-1 -0.07 >More info -0.50 >More info ABA control Original data GEO bulk
543 Shoot P recovery 0.56 >More info 0.00 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
544 desiccated mature pollen grains -0.04 >More info -0.52 >More info hydrated pollen grains Original data GEO bulk
545 cat2-short-day 4d -0.03 >More info 0.59 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
546 epiF3 -0.66 >More info 0.11 >More info WT Col-0 aerial part Original data
547 Brz220 12 h -0.05 >More info -0.50 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
548 COL-0-Fe--root 0.54 >More info -0.00 >More info COL-0-Ctrl--root root Original data
549 2hr continuous KCl and MSX control PeR cell 0.58 >More info -0.05 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
550 Mh0 UV -0.51 >More info -0.01 >More info Mh0 mock UV seedling Original data
551 Shoot submergence 7h 0.52 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
552 protoplasts T1 [flg22] 0.53 >More info -0.01 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
553 WT roots - Fe 0.55 >More info -0.03 >More info WT roots + Fe Roots Original data GEO bulk
554 17 0h total -0.50 >More info -0.01 >More info 27 0h total whole seedlings floating on MS medium Original data
555 Light 3day hml -0.60 >More info 0.09 >More info 0h hml Original data
556 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
557 xrn4-5 flower -0.50 >More info -0.00 >More info Col-0 flower inflorescence Original data GEO bulk
558 FLIGHT TAGESB plate 0.51 >More info -0.01 >More info GROUND CONTROL TAGESB plate Original data
559 seedling -S Exp 0.55 >More info -0.06 >More info seedling FN Exp seedling Original data
560 Got7 UV -0.15 >More info 0.64 >More info Got7 mock UV seedling Original data
561 rgs1+no sugars 0.05 >More info -0.52 >More info WT+no sugars rosette leaves Original data GEO bulk
562 Mutant axr3-1 (IAA) 0.50 >More info -0.03 >More info Col (IAA) Original data GEO bulk
563 Shoot -P -0.53 >More info 0.07 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
564 shoot control p35S 0.52 >More info -0.07 >More info shoot control total Original data GEO bulk
565 2hr continuous KNO3 LRCR cell -0.51 >More info 0.08 >More info 2hr KCl control LRCR cell Lateral Root Cap root cells Original data GEO bulk
566 stn7-1 -0.54 >More info 0.13 >More info Col-0 rosette leaves Original data GEO bulk
567 P. infestans 6 h (leaf) 0.55 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
568 shoot control pRBCS 0.51 >More info -0.12 >More info shoot control total Original data GEO bulk
569 Col PSTDC3000 24h 0.52 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
570 Differentiation 12h -0.13 >More info 0.52 >More info Differentiation 0h leaves Original data
571 seedling h S Exp -0.51 >More info 0.14 >More info seedling -S Exp seedling Original data
572 AAF-OX 0.54 >More info -0.18 >More info Col-0 Rosette leaf Original data GEO bulk
573 0h hml 0.55 >More info -0.20 >More info 0h wt Original data
574 GA3 0.5 h (ga1) 0.15 >More info -0.50 >More info Mock 0.5 h (ga1) Original data Basic hormone treatment of seedlings
575 2hr transitory KNO3 LRCR cell -0.53 >More info 0.24 >More info 2hr KCl control LRCR cell Lateral Root Cap root cells Original data GEO bulk
576 TaFLS overexpression line (OE1) -0.52 >More info 0.24 >More info Col-0 Rosette leaves Original data
577 Infected Col-0 leaf -0.57 >More info 0.30 >More info Mock Col-0 leaf F. oxysporum leaf Original data GEO bulk