4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Botrytis cinerea 18h
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Botrytis cinerea 18h"  Help Download transcriptome of top 30
Score Experiment Correlation from
Botrytis cinerea 18h		 Correlation to
Botrytis cinerea 18h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Botrytis cinerea 18h 1.00 >More info 1.00 >More info control 18h Original data GEO bulk
2 B.cinerea 18 h infection 1.00 >More info 1.00 >More info Mock 18 h Original data Botrytis cinerea infection
3 Shoot -Cs 0.88 >More info 0.90 >More info Control-shoot Original data GEO bulk
4 Botrytis cinerea 48h 0.87 >More info 0.86 >More info control 48h Original data GEO bulk
5 Glyphosate EC50 0.84 >More info 0.81 >More info Carrier (Glyphosate) Original data GEO bulk
6 Pst-DC3000(avrRpm1)-4hpi 0.81 >More info 0.83 >More info Pst-DC3000-4hpi Original data GEO bulk
7 WT Col-0 Bgh inoculated 0.81 >More info 0.83 >More info WT Col-0 Un-inoculated Original data GEO bulk
8 ataf1-1 mutant Col-0 Bgh inoculated 0.84 >More info 0.79 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
9 cpr5npr1svi1 0.83 >More info 0.78 >More info WT(COL) Original data GEO bulk
10 PAHs stress 0.83 >More info 0.77 >More info exp control phenanthrene whole plants Original data GEO bulk
11 Sulfometuron EC50 0.85 >More info 0.75 >More info Carrier Original data GEO bulk
12 DFPM 0.85 >More info 0.73 >More info control Original data GEO bulk
13 col-5 hrpA 12h 0.77 >More info 0.80 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
14 IMI 4mM 0.78 >More info 0.79 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
15 ice1 control 0.83 >More info 0.74 >More info WT control Original data GEO bulk
16 Imidazolinone EC50 0.83 >More info 0.74 >More info Carrier (Imidazolinone) Original data GEO bulk
17 del1-1 mutant 5d uninfected 0.84 >More info 0.73 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
18 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.82 >More info 0.75 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
19 ein2-1 9 hpi A. brassicicola 0.78 >More info 0.78 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
20 HopZ1a treated 0.77 >More info 0.79 >More info col Original data GEO bulk
21 Col whole leaf 7dpi 0.81 >More info 0.74 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
22 Col-0 9 hpi A. brassicicola 0.76 >More info 0.79 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
23 flu over-tAPX 0.77 >More info 0.78 >More info WT Col Original data GEO bulk
24 R. solani AG2-1 0.88 >More info 0.66 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
25 Fenclorim 4hr 0.77 >More info 0.77 >More info Acetone 4hr root Original data GEO bulk
26 ERF96OE 0.70 >More info 0.84 >More info WT leaf Original data
27 P.p 30hai 0.79 >More info 0.75 >More info At-Control roots Original data GEO bulk
28 AvrRpt2 Col-0 6hpi 0.78 >More info 0.75 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
29 Col-0 under 4 days salt 0.76 >More info 0.77 >More info Col-0 under control 4 days salt treatment rosette Original data
30 cat2-2; 8h switch to ambient CO2 concentrations; 0.78 >More info 0.75 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
31 apk1 apk2 0.86 >More info 0.67 >More info Col0-control whole rosette Original data GEO bulk
32 bZIP1ko mutant N+Light- 0.73 >More info 0.80 >More info WT-sib N+Light- whole plant Original data GEO bulk
33 Cor 10h 0.78 >More info 0.75 >More info Mock 10h Cor Original data GEO bulk
34 35S::PI ap3-3 35S::AP-GR +DEX 0.69 >More info 0.84 >More info 0hr DEX Original data GEO bulk
35 Elevated CO2 AMPLE N NIGHT 0.74 >More info 0.78 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
36 gh3.5-1D 48 hpi 0.74 >More info 0.78 >More info Col-0 uninoculated Original data GEO bulk
37 Col whole leaf 5dpi 0.76 >More info 0.76 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
38 col-5 DC3000 12h 0.72 >More info 0.80 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
39 SLWF infested 0.73 >More info 0.79 >More info SLWF uninfested rosette tissue Original data GEO bulk
40 GST NPP1 4 h (leaf) 0.77 >More info 0.74 >More info Mock 4 h (leaf) Original data Elicitor treatments
41 Pto inoculated 0.76 >More info 0.75 >More info col Original data GEO bulk
42 Mutant gh3.5-1D (AvrRpt2) 0.70 >More info 0.81 >More info Col-0 (AvrRpt2) Original data GEO bulk
43 WT powdery mildew 0.80 >More info 0.71 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
44 AgNO3 3 h 0.82 >More info 0.69 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
45 DC3000 24h 0.69 >More info 0.82 >More info Mock 24h DC3000 Original data GEO bulk
46 ice1 6H Cold 0.82 >More info 0.68 >More info WT 6H Cold Original data GEO bulk
47 mil4 BTH 0.77 >More info 0.73 >More info Col BTH rosettes Original data GEO bulk
48 HopZ1a treated ulp1c ulp1d 0.74 >More info 0.76 >More info col Original data GEO bulk
49 sid2-2 9 hpi A. brassicicola 0.76 >More info 0.74 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
50 Triazolopyrimidine EC50 0.81 >More info 0.68 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
51 npr1-1 SA -0.83 >More info -0.66 >More info Col-0 SA complete seedling Original data
52 Primisulfuron EC50 0.78 >More info 0.71 >More info Carrier (primisulfuron) Original data GEO bulk
53 PBZ 0.79 >More info 0.70 >More info none PBZ Rosette Original data GEO bulk
54 WT-SA 0.78 >More info 0.71 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
55 R. solani AG8 0.84 >More info 0.65 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
56 Leafminer locally damaged thaliana seedlings 0.76 >More info 0.72 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
57 WT Bc inoculation 14h 0.83 >More info 0.65 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
58 Col leaves 48h LT 0.78 >More info 0.70 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
59 hrcC 0.73 >More info 0.75 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
60 Elevated CO2 AMPLE N DAY 0.74 >More info 0.74 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
61 ABA DFPM 0.76 >More info 0.72 >More info control Original data GEO bulk
62 CLO 4mM 0.68 >More info 0.79 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
63 Chitosan 3h Treatment 0.80 >More info 0.67 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
64 Osmotic Stress 24 h (shoot) 0.77 >More info 0.70 >More info Stress mock 24 h (shoot) Original data Stress treatments
65 flu 0.69 >More info 0.78 >More info WT Col Original data GEO bulk
66 ceh1 mutant 0.77 >More info 0.70 >More info Parent line Original data
67 gun1gun5 far-red pretreated -0.75 >More info -0.72 >More info WT far-red pretreated Original data GEO bulk
68 cpr5scv1 0.77 >More info 0.69 >More info WT(COL) Original data GEO bulk
69 shoots bhlh100/101 0uM Fe 0.83 >More info 0.63 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
70 P.p 10.5hai 0.73 >More info 0.73 >More info At-Control roots Original data GEO bulk
71 anac017-2 AntimycinA 3h -0.74 >More info -0.72 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
72 Col ozone 2d 0.72 >More info 0.74 >More info Col clean-air 2d ozone Original data GEO bulk
73 lht1 PstDC3000 48h 0.81 >More info 0.65 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
74 hrpA 7h 0.74 >More info 0.72 >More info Mock 7h hrpA Original data GEO bulk
75 WT-NOCO2 INFECTED 0.78 >More info 0.67 >More info WT-MOCK Original data GEO bulk
76 MIL4 ox BTH 0.81 >More info 0.64 >More info Col BTH Original data GEO bulk
77 bak1-3 +Pep2 10h 0.69 >More info 0.76 >More info WT +Pep2 10h Pep2 Original data GEO bulk
78 Cor hrpS 10h 0.82 >More info 0.63 >More info Mock 10h Cor hrpS Original data GEO bulk
79 Laer Flg22 2h 0.75 >More info 0.70 >More info Laer Control leaf discs Original data GEO bulk
80 Laer pretreat GA+JA Flg22 0h 0.79 >More info 0.65 >More info Laer pretreat water control leaf discs Original data GEO bulk
81 WT 1wk -P 0.85 >More info 0.59 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
82 pvip1 pvip2 0.73 >More info 0.71 >More info Col-0 whole rosettes Original data GEO bulk
83 penta Alternaria 3dpi 0.79 >More info 0.65 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
84 col-5 hrpA 2h 0.79 >More info 0.64 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
85 mpk6-ko Flg22 4h 0.68 >More info 0.75 >More info mpk6-ko H2O 4h Original data GEO bulk
86 edr1 18 h powdery mildew 0.80 >More info 0.63 >More info Col-0 18 h powdery mildew Original data GEO bulk
87 cpr5npr1 0.71 >More info 0.72 >More info WT(COL) Original data GEO bulk
88 S15-118 0.72 >More info 0.71 >More info wt Original data GEO bulk
89 nia1nia2 0.74 >More info 0.69 >More info Col-0 whole seedlings Original data GEO bulk
90 CMP 24hr 0.69 >More info 0.74 >More info Acetone 24hr root Original data GEO bulk
91 WT 2-4h Xanthomonas 0.78 >More info 0.64 >More info WT T0 Original data GEO bulk
92 ice1 24H Cold 0.75 >More info 0.67 >More info WT 24H Cold Original data GEO bulk
93 miR393 flg22 2h 0.72 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
94 Differentiation 12h 0.73 >More info 0.69 >More info Differentiation 0h leaves Original data
95 col-5 DC3000-avrRpm 4h 0.74 >More info 0.68 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
96 35S:RPS4 eds1-2 8h -0.74 >More info -0.68 >More info 35S:RPS4 8h leaves Original data
97 Elevated CO2 fully expanded leaf 0.85 >More info 0.56 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
98 wrky33 Bc inoculation 14h 0.80 >More info 0.61 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
99 P.p 6hai 0.73 >More info 0.68 >More info At-Control roots Original data GEO bulk
100 ice1 3H Cold 0.80 >More info 0.61 >More info WT 3H Cold Original data GEO bulk
101 sid2 -0.75 >More info -0.66 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
102 Seedling KUA1-IOX est 0.67 >More info 0.74 >More info Seedling KUA1-IOX mock Original data
103 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.77 >More info 0.64 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
104 smg7b-1 0.76 >More info 0.65 >More info WT whole plant Original data GEO bulk
105 CMP 4hr 0.68 >More info 0.73 >More info Acetone 4hr root Original data GEO bulk
106 Cor 24h 0.68 >More info 0.73 >More info Mock 24h Cor Original data GEO bulk
107 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.77 >More info 0.64 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
108 Laer Flg22 1h 0.72 >More info 0.69 >More info Laer Control leaf discs Original data GEO bulk
109 Laer treat paclobutrazol (PAC) 0.70 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
110 Col-Luc WT 3h antimycin A 0.72 >More info 0.69 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
111 essp4/sdg8-5 mutant 0.78 >More info 0.62 >More info wild type leaf Original data GEO bulk
112 Laer Flg22+GA 2h 0.73 >More info 0.67 >More info Laer Control leaf discs Original data GEO bulk
113 Col-0 flu HL 3h 0.73 >More info 0.67 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
114 leaf13 0.64 >More info 0.76 >More info unwounded leaves none Original data GEO bulk
115 TNT-seedlings 0.65 >More info 0.75 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
116 coi1-16 ein2 sid2 ctrl -0.75 >More info -0.65 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
117 Col whole leaf amplified 5 dpi 0.78 >More info 0.62 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
118 S58-2 0.67 >More info 0.72 >More info wt Original data GEO bulk
119 DC3000 2 h (leaf) 0.64 >More info 0.75 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
120 Col0-PsmES4326-24hpi 0.78 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
121 rcf1-1 cold 12h 0.75 >More info 0.64 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
122 GO5; 8h switch to ambient CO2 concentrations; 0.73 >More info 0.66 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
123 mkk1/mkk2 24h BTH rep 0.71 >More info 0.68 >More info Col-0 24h BTH rep Original data GEO bulk
124 35S:RPS4 eds1-2 24h -0.69 >More info -0.70 >More info 35S:RPS4 24h leaves Original data
125 Mature callus 0.70 >More info 0.69 >More info Young callus hypocotyls Original data GEO bulk
126 safener treated 0.69 >More info 0.70 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
127 aba3-1 0.76 >More info 0.62 >More info wt Original data GEO bulk
128 miR393 flg22 1h 0.73 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
129 Leaf GLU1-KO 0.73 >More info 0.65 >More info Leaf Col(0) rosette leaves Original data GEO bulk
130 root Dosed gold 0.75 >More info 0.63 >More info root No gold .125 mM gold 24 h roots Original data
131 vte2-1 3d vernalization 0.78 >More info 0.60 >More info WT 3d vernalization Original data GEO bulk
132 pnp1-1 1wk +P 0.74 >More info 0.64 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
133 Col-0 ozone 0.77 >More info 0.61 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
134 lht1 untreated 0.73 >More info 0.65 >More info WT untreated untreated leaf Original data GEO bulk
135 WT flg22 2h 0.72 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
136 0.125 mM gold 24 h 0.75 >More info 0.63 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
137 ASL9-ox -0.72 >More info -0.66 >More info WT aerial parts of seedlings Original data GEO bulk
138 Phaseolicola 2 h (leaf) 0.62 >More info 0.75 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
139 Col-0 INA 48h 0.76 >More info 0.61 >More info Col-0 MOCK 48h Original data GEO bulk
140 msh1 albino 0.75 >More info 0.62 >More info WT aerial part Original data GEO bulk
141 det2 light-dark -0.84 >More info -0.53 >More info det2 light light-dark Original data GEO bulk
142 PNO8 3 h 0.66 >More info 0.71 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
143 Laer Flg22+GA 1h 0.70 >More info 0.67 >More info Laer Control leaf discs Original data GEO bulk
144 hrpA fliC 7h 0.73 >More info 0.64 >More info Mock 7h hrpA fliC Original data GEO bulk
145 35S::ERF104 Flg22 4h 0.65 >More info 0.72 >More info 35S::ERF104 H2O 4h Original data GEO bulk
146 GSH 0.72 >More info 0.65 >More info control GSH treated seedlings Original data GEO bulk
147 Time-0 chr11-1chr17-1 -0.81 >More info -0.55 >More info Time-0 Col-0 leaf explants Original data
148 UV 0.80 >More info 0.56 >More info WT aerial region Original data GEO bulk
149 seedlings-week-old RECA1-overexpressing
transgenic		 0.68 >More info 0.68 >More info seedlings-week-old Col-0 seedlings Original data
150 pnp1-1 3h +P 0.79 >More info 0.57 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
151 dor drought 0.63 >More info 0.73 >More info WT drought Original data GEO bulk
152 IRP1-OE-Fe--shoot 0.72 >More info 0.64 >More info COL-0-Fe--shoot shoot Original data
153 WT flg22 1h 0.70 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
154 Col ozone 3h 0.73 >More info 0.63 >More info Col clean-air 3h ozone Original data GEO bulk
155 ARR22-ox (t-zeatin 3 h) 0.76 >More info 0.60 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
156 oligomycin 4 h 0.73 >More info 0.62 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
157 rosette Dark Wounded 0.64 >More info 0.71 >More info rosette Dark Control Original data GEO bulk
158 Te ozone 0.72 >More info 0.63 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
159 LTN008-2 aza-dc 0.78 >More info 0.57 >More info LTN012-2 Mock Original data
160 Compost 0.73 >More info 0.62 >More info Perlite Compost Original data GEO bulk
161 aerial organ callus inducing medium 48 h 0.75 >More info 0.60 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
162 Laer pretreat GA+JA Flg22 2h 0.75 >More info 0.60 >More info Laer pretreat water control leaf discs Original data GEO bulk
163 cpr5 0.68 >More info 0.66 >More info WT(COL) Original data GEO bulk
164 Shoot -K 0.67 >More info 0.67 >More info Control-shoot Original data GEO bulk
165 K starvation (shoot) 0.67 >More info 0.67 >More info Ws (shoot) Original data GEO bulk
166 DC3000 7h 0.62 >More info 0.72 >More info Mock 7h DC3000 Original data GEO bulk
167 Laer pretreat GA+JA Flg22 1h 0.74 >More info 0.60 >More info Laer pretreat water control leaf discs Original data GEO bulk
168 pepr1-1 Pepr2-3 +Pep2 10h -0.72 >More info -0.62 >More info WT +Pep2 10h Pep2 Original data GEO bulk
169 AFB1 flg22 2h 0.72 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
170 WT NAA/flg 1h 0.70 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
171 UV Stress 24 h (shoot) 0.73 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
172 cop1 Seedling BL 0.65 >More info 0.69 >More info WT Seedling BL Original data GEO bulk
173 low water potential 0.70 >More info 0.64 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
174 AvrRpm1 2 h (leaf) 0.66 >More info 0.67 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
175 camta1/3 warm 0.73 >More info 0.60 >More info WT warm entire aerial part Original data GEO bulk
176 Ba1 UV 0.77 >More info 0.56 >More info Ba1 mock UV seedling Original data
177 erf104-ko Flg22 4h 0.63 >More info 0.70 >More info erf104-ko H2O 4h Original data GEO bulk
178 Col-0-avrB-6h 0.65 >More info 0.68 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
179 sta1 0.66 >More info 0.66 >More info WT Original data GEO bulk
180 CT101 ozone 0.76 >More info 0.56 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
181 Leafminer damaged seedlings 0.76 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
182 pepr1-1 Pepr2-3 +Pep2 2h -0.64 >More info -0.68 >More info WT +Pep2 2h Pep2 Original data GEO bulk
183 arf2 brz -0.73 >More info -0.59 >More info arf2 mock Original data GEO bulk
184 anac017-1 H2O2 3h -0.71 >More info -0.60 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
185 WT H2O2 3h 0.72 >More info 0.59 >More info WT water 3h 3h_H2O2 Original data GEO bulk
186 sdg2 0.79 >More info 0.52 >More info wt seedling Original data GEO bulk
187 cdpk6-yfp 0.78 >More info 0.53 >More info Kan seedlings Original data GEO bulk
188 mkk1/mkk2 control rep 0.70 >More info 0.61 >More info Col-0 Time 0 rep Original data GEO bulk
189 Wounding Stress3 h (shoot) 0.62 >More info 0.69 >More info Stress mock 3 h (shoot) Original data Stress treatments
190 AFB1 flg22 1h 0.65 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
191 atgsnor1-1 -0.65 >More info -0.65 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
192 pmr5 0.63 >More info 0.67 >More info Col-0 Original data GEO bulk
193 WT AntimycinA 3h 0.67 >More info 0.63 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
194 toc1-1-49hr 0.70 >More info 0.60 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
195 toc1-1-77hr 0.71 >More info 0.59 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
196 Blue Light 4 h 0.82 >More info 0.48 >More info White Light 4 h Original data Light treatments
197 pmr5 pmr6 0.66 >More info 0.63 >More info Col-0 Original data GEO bulk
198 Mutant siz1-3 0.72 >More info 0.57 >More info Col-0 Original data GEO bulk
199 apum23 0.75 >More info 0.54 >More info WT (Col-3) aerial parts Original data GEO bulk
200 Mutant coi1(leaf) -0.62 >More info -0.67 >More info Col-0 (leaf) Original data GEO bulk
201 siz1-3 control 0.72 >More info 0.57 >More info Col-0 control Original data GEO bulk
202 dde2-2 9 hpi A. brassicicola 0.72 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
203 35S-MIF1 dark grown 0.72 >More info 0.56 >More info Dark-grown WT control Original data GEO bulk
204 RPL18 TuMV inoculated total RNA 0.63 >More info 0.65 >More info mock inoculated total RNA PO Original data GEO bulk
205 Col-0 DCA 48h 0.71 >More info 0.57 >More info Col-0 MOCK 48h Original data GEO bulk
206 oas-a1.1 Cd 24h 0.61 >More info 0.66 >More info Cd 24h root Shoot Original data GEO bulk
207 WT +Pep2 10h 0.77 >More info 0.50 >More info WT untreated Pep2 Original data GEO bulk
208 toc1-1-53hr 0.75 >More info 0.52 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
209 treated group 0.60 >More info 0.66 >More info Control group Original data
210 downy mildew cotyledons late stage 0.83 >More info 0.43 >More info mock inoculated Cotyledons Original data GEO bulk
211 csn5 (csn5a-2 csn5b) light 0.67 >More info 0.59 >More info WT light Original data GEO bulk
212 Laer pretreat GA Flg22 1h 0.54 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
213 E.coli TUV86 2 fliC 7h 0.64 >More info 0.61 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
214 cat2-hCO2 -0.82 >More info -0.43 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
215 ataf1-1 mutant Col-0 Un-inoculated -0.71 >More info -0.54 >More info WT Col-0 Un-inoculated Original data GEO bulk
216 Stem tissue 5 days NAA 0.74 >More info 0.51 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
217 CHS-silenced type -0.81 >More info -0.44 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
218 gai Control 0.72 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
219 sid2-1 cold -0.69 >More info -0.56 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
220 WT roots - Fe 0.59 >More info 0.66 >More info WT roots + Fe Roots Original data GEO bulk
221 amiR-tor induced 6d 0.52 >More info 0.73 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
222 IRP1-OE-Ctrl--shoot 0.68 >More info 0.57 >More info COL-0-Ctrl--shoot shoot Original data
223 myb3 myb3r4d 0.68 >More info 0.56 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
224 short 12-degree- 0.58 >More info 0.66 >More info control short Original data GEO bulk
225 C24 ozone 0.69 >More info 0.55 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
226 ARR22-ox 0.76 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
227 vtc1 (II) 0.74 >More info 0.50 >More info Col (II) rosette Original data GEO bulk
228 cpr5 0.65 >More info 0.59 >More info WT seedling Original data GEO bulk
229 5-Triiodobenzoic acid3 h 0.67 >More info 0.57 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
230 edr1 36 h powdery mildew 0.72 >More info 0.52 >More info Col-0 36 h powdery mildew Original data GEO bulk
231 abi4 vtc2 (I) 0.67 >More info 0.57 >More info Col (I) rosette Original data GEO bulk
232 WT NAA/flg 2h 0.65 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
233 WT +elf18 10h 0.63 >More info 0.60 >More info WT untreated elf18 Original data GEO bulk
234 seedlings protease IV 0.57 >More info 0.66 >More info seedlings nontreated control whole seedling Original data
235 eds16 whole leaf 5dpi -0.57 >More info -0.66 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
236 M6PR transgenic leaf 100mM NaCl -0.50 >More info -0.73 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
237 efr-1 +elf18 10h -0.58 >More info -0.65 >More info WT +elf18 10h elf18 Original data GEO bulk
238 vtc2 (I) 0.67 >More info 0.55 >More info Col (I) rosette Original data GEO bulk
239 WT no Pi 0.66 >More info 0.56 >More info WT complete seedlings Original data
240 E.coli 0157 H7 7h 0.63 >More info 0.59 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
241 35S:LOB-GR mock 0.69 >More info 0.53 >More info Col mock mock seedling Original data GEO bulk
242 8h-DC3000 avrRpm1 0.63 >More info 0.59 >More info 8h-DC3000 leaves Original data GEO bulk
243 Laer pretreat JA Flg22 2h 0.73 >More info 0.49 >More info Laer pretreat water control leaf discs Original data GEO bulk
244 npr1 sni1 brca2a 0.71 >More info 0.50 >More info npr1 sni1 water water seedling Original data GEO bulk
245 P.p 2.5hai 0.60 >More info 0.61 >More info At-Control roots Original data GEO bulk
246 Col whole leaf 5 dpi 0.59 >More info 0.62 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
247 bio4-1 mutant watered00µM biotin leaves -0.66 >More info -0.55 >More info bio4-1 mutant leaves leaves Original data GEO bulk
248 long 17-degree- 0.58 >More info 0.63 >More info control long Original data GEO bulk
249 coi1-16 ein2 sid2 ozone 0.72 >More info 0.49 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
250 sfr3 control 0.68 >More info 0.53 >More info WT control All aerial tissue Original data GEO bulk
251 Col whole leaf 3dpi 0.65 >More info 0.56 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
252 aerial organ callus inducing medium 96 h 0.58 >More info 0.63 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
253 aox1a(line) MLD stressed 0.53 >More info 0.67 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
254 Col-0 C2H4 24h 0.67 >More info 0.53 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
255 WT cold 0.70 >More info 0.50 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
256 CeO2 germinant -0.57 >More info -0.63 >More info Millipore Water germinant CeO2 seedling Original data
257 upf3 0.61 >More info 0.59 >More info WT whole plant Original data GEO bulk
258 short 17-degree- 0.58 >More info 0.62 >More info control short Original data GEO bulk
259 Methyl Jasmonate 1 h 0.50 >More info 0.70 >More info Mock 1 h Original data Basic hormone treatment of seedlings
260 arf2 mock 0.67 >More info 0.52 >More info Col mock Original data GEO bulk
261 WT+H2O2 0.51 >More info 0.68 >More info WT H2O2 Original data GEO bulk
262 Col-0 48 hpi 0.55 >More info 0.64 >More info Col-0 uninoculated Original data GEO bulk
263 sni1 0.60 >More info 0.59 >More info WT Original data GEO bulk
264 abh1 -ABA 0.54 >More info 0.65 >More info Col-0 -ABA Original data GEO bulk
265 Mutant arf2 (etiol) 0.67 >More info 0.52 >More info Col (etiol) Original data GEO bulk
266 WT resupplied Pi 4h 0.58 >More info 0.61 >More info WT complete seedlings Original data
267 long 14-degree- 0.62 >More info 0.57 >More info control long Original data GEO bulk
268 pmr4-1 control 0.54 >More info 0.65 >More info WT control uninoculated Original data GEO bulk
269 GST-overexpression seedlings control 0.72 >More info 0.47 >More info WT seedlings control Seedlings Original data
270 SA 4mM 0.65 >More info 0.54 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
271 Methyl Jasmonate 3 h 0.50 >More info 0.68 >More info Mock 3 h Original data Basic hormone treatment of seedlings
272 Col-0 V. longisporum-inoculated 48 hpi 0.63 >More info 0.55 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
273 Mutant siz1-3 (Drought) 0.63 >More info 0.55 >More info Col-0 (Drought) Original data GEO bulk
274 gpa1-4/agb1-2 ozone 2d -0.65 >More info -0.53 >More info Col ozone 2d ozone Original data GEO bulk
275 WT in -N 0.54 >More info 0.64 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
276 siz1-3 drought 0.63 >More info 0.55 >More info Col-0 drought Original data GEO bulk
277 root endodermis and quiescent center 40 mM NaCl 0.52 >More info 0.66 >More info root endodermis and quiescent center Original data GEO bulk
278 Col-0 drought 0.53 >More info 0.65 >More info Col-0 control Original data GEO bulk
279 ani1 T0.5 -0.72 >More info -0.46 >More info WT T0.5 root tissue Original data GEO bulk
280 24h volatiles Sm. R3089 -0.61 >More info -0.57 >More info 24h untreated whole seedling Original data GEO bulk
281 ulp1c ulp1d +Pto 0.48 >More info 0.70 >More info ulp1c ulp1d mock Original data GEO bulk
282 Fenclorim 24hr 0.49 >More info 0.69 >More info Acetone 24hr root Original data GEO bulk
283 Laer pretreat JA Flg22 1h 0.63 >More info 0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
284 rao1-2 3h antimycin A -0.74 >More info -0.43 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
285 RPL18 TuMV inoculated polysomal RNA 0.54 >More info 0.63 >More info mock inoculated polysomal RNA PO Original data GEO bulk
286 edr1 0 h powdery mildew 0.71 >More info 0.46 >More info Col-0 0 h powdery mildew Original data GEO bulk
287 GO5; 0h switch to ambient CO2 concentrations; -0.65 >More info -0.52 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
288 plant (tga2-5-6) 4h phytoprostane A1 0.67 >More info 0.50 >More info plant (tga2-5-6) 4h control Original data GEO bulk
289 npr1-3 DCA 48h 0.55 >More info 0.62 >More info npr1-3 MOCK 48h Original data GEO bulk
290 Light 3day wt -0.69 >More info -0.48 >More info 0h wt Original data
291 Tsu -Fe 24h Shoots 0.68 >More info 0.49 >More info Tsu +Fe 24h Shoots Original data GEO bulk
292 agb1 gpa1 +ABA LF -0.68 >More info -0.49 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
293 toc1-1-57hr 0.71 >More info 0.46 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
294 short 10-degree- 0.60 >More info 0.56 >More info control short Original data GEO bulk
295 8hr-pH4.5 0.60 >More info 0.56 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
296 Oxidative Stress 3 h (root) -0.68 >More info -0.48 >More info Stress mock 3 h (root) Original data Stress treatments
297 smg5-2 0.63 >More info 0.53 >More info WT whole plant Original data GEO bulk
298 bio4-1 mutant leaves 0.68 >More info 0.48 >More info WT leaves leaves Original data GEO bulk
299 gh3.5D uninoculated -0.60 >More info -0.56 >More info Col-0 48 hpi Original data GEO bulk
300 Tsu -Fe 48h Shoots 0.49 >More info 0.67 >More info Tsu +Fe 24h Shoots Original data GEO bulk
301 Laer pretreat GA Flg22 0h 0.71 >More info 0.45 >More info Laer pretreat water control leaf discs Original data GEO bulk
302 pho1 0.70 >More info 0.46 >More info Col2WT Original data GEO bulk
303 16h Col-0 0.74 >More info 0.42 >More info 00h Col-0 Original data GEO bulk
304 Salt Stress 24 h (shoot) 0.47 >More info 0.69 >More info Stress mock 24 h (shoot) Original data Stress treatments
305 coi1-PsmES4326-24hpi -0.44 >More info -0.72 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
306 plant (tga2-5-6) 4h OPDA 0.60 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
307 tmm1-inflorescence-tips 0.78 >More info 0.37 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
308 OE WRKY40.4 high light 0.56 >More info 0.59 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
309 AsAKiin11 T2 0.51 >More info 0.64 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
310 Bur-0-3h IAA 0.70 >More info 0.45 >More info Bur-0h IAA whole plant Original data GEO bulk
311 des1 water 0.60 >More info 0.55 >More info WT water water leaf Original data GEO bulk
312 D2O 0.57 >More info 0.58 >More info H2O seedling Original data GEO bulk
313 cs26 long day 0.69 >More info 0.46 >More info Leaves-WT-LD leaf Original data GEO bulk
314 Cambium 5 days NAA 0.65 >More info 0.50 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
315 Heat shock optimum 0.50 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
316 NJ15 0.44 >More info 0.71 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
317 CMV-WT 0.52 >More info 0.62 >More info Mock-At Aerial tissues Original data GEO bulk
318 plant (Col-0) 4h OPDA 0.53 >More info 0.61 >More info plant (Col-0) 4h control Original data GEO bulk
319 OPDA 4 h 0.53 >More info 0.61 >More info Col-0 Original data GEO bulk
320 RRE2 Chitin 0.46 >More info 0.68 >More info Chitin Original data GEO bulk
321 albino Ds13-2198-1 -0.72 >More info -0.42 >More info control Original data GEO bulk
322 cdkf:1-2 0.69 >More info 0.45 >More info wt seedling young seedlings Original data GEO bulk
323 root cells cortex 140mM NaCl 3 hours 0.69 >More info 0.45 >More info root cells cortex standard 1 hour root cells cortex Original data
324 GRX-overexpression seedlings control 0.71 >More info 0.43 >More info WT seedlings control Seedlings Original data GEO bulk
325 mkk2 24h BTH rep 0.64 >More info 0.49 >More info Col-0 24h BTH rep Original data GEO bulk
326 Phytoprostane A1 4 h 0.54 >More info 0.59 >More info Col-0 Original data GEO bulk
327 9 hr Hypoxia IP RNA 0.64 >More info 0.49 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
328 rcf1-1 cold 24h 0.51 >More info 0.62 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
329 NAA -AA 0.63 >More info 0.50 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
330 Mutant cry1 (High Light) -0.57 >More info -0.56 >More info Col-0 (High Light) Original data GEO bulk
331 til1-1 22C 0.53 >More info 0.60 >More info Col-0 22C Original data GEO bulk
332 cry1 high light -0.57 >More info -0.56 >More info Col-O high light Original data GEO bulk
333 IAA7mII over-expressor IAA Treated 0.44 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
334 Ibuprofen 3 h 0.56 >More info 0.56 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
335 elf3-7-16ºC 0.56 >More info 0.56 >More info WT-16ºC Original data GEO bulk
336 SAB 0.61 >More info 0.51 >More info COL seedling Original data
337 Flagellin 4 h (leaf) 0.48 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
338 cop1 Seedling BL+ABA 0.48 >More info 0.64 >More info WT Seedling BL+ABA Original data GEO bulk
339 Col BTH 0.45 >More info 0.67 >More info Col rosettes Original data GEO bulk
340 scrm-D 0.68 >More info 0.43 >More info Col-0 WT whole seedling Original data GEO bulk
341 12h Col-0 0.55 >More info 0.56 >More info 00h Col-0 Original data GEO bulk
342 ein2-PsmES4326-24hpi -0.44 >More info -0.67 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
343 upf1 0.60 >More info 0.51 >More info WT whole plant Original data GEO bulk
344 miR 0h 0.57 >More info 0.54 >More info Col 0h Leaf Original data GEO bulk
345 WT 90-105 min Xanthomonas 0.57 >More info 0.54 >More info WT T0 Original data GEO bulk
346 Propiconazole 3 h 0.61 >More info 0.50 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
347 Salt Stress 24 h (root) 0.61 >More info 0.50 >More info Stress mock 24 h (root) Original data Stress treatments
348 Dex-rga(delta17) 2h GA4+DEX -0.49 >More info -0.62 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
349 WT 24h cold 0.50 >More info 0.60 >More info WT warm 24h cold entire aerial part Original data GEO bulk
350 root cells endodermis 140mM NaCl 3 hours 0.74 >More info 0.36 >More info root cells endodermis standard 1 hour root cells endodermis Original data
351 Col-0 Flg22 4h 0.52 >More info 0.58 >More info Col-0 H2O 4h Original data GEO bulk
352 1h light (+Lincomycin) 0.70 >More info 0.40 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
353 rpoTmp(line) MLD stressed 0.54 >More info 0.56 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
354 6-trichlorophenoxyacetic acid 3 h 0.56 >More info 0.54 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
355 camta1/2/3 24h cold 0.62 >More info 0.48 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
356 ckh1 CK200 0.51 >More info 0.59 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
357 P.syringae AvrRpt2 4 h (leaf) 0.55 >More info 0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
358 atsf1-2 mutant seedling 0.62 >More info 0.48 >More info Col-0 seedling seedlings Original data
359 aerial organ callus inducing medium 24h 0.56 >More info 0.54 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
360 sdg8-2 mutant 0.63 >More info 0.47 >More info wild type leaf Original data GEO bulk
361 nia1nia2noa1-2 0.59 >More info 0.51 >More info Col-0 whole seedlings Original data GEO bulk
362 Whole root - S 3H 0.43 >More info 0.67 >More info Whole root - S 0H Original data GEO bulk
363 del1-1 5dpi 0.77 >More info 0.32 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
364 A. thaliana-A. lyrata hybrid -0.55 >More info -0.54 >More info A. thaliana mature leaves before flowering Original data GEO bulk
365 col-5 DC3000 4h 0.55 >More info 0.54 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
366 opr3 JA 2 h 0.42 >More info 0.67 >More info opr3 0 h Original data GEO bulk
367 camta3-2 0.61 >More info 0.48 >More info WT Original data GEO bulk
368 OE-HRA1 2HS  0.71 >More info 0.38 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
369 Col-0-3h IAA 0.69 >More info 0.40 >More info Col-0-0h IAA whole plant Original data GEO bulk
370 brm-101 0.61 >More info 0.47 >More info Ler Original data GEO bulk
371 Col-0 WT HL 3h 0.51 >More info 0.57 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
372 camta2/3 warm 0.71 >More info 0.37 >More info WT warm entire aerial part Original data GEO bulk
373 20d after anthesis 0.58 >More info 0.50 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
374 penta Control 0.74 >More info 0.34 >More info Laer Control leaf discs Original data GEO bulk
375 E.orontii Infection 3 day 0.66 >More info 0.42 >More info Uninfection 3 day Original data Elicitor treatments
376 WT mitomycin C 0.70 >More info 0.38 >More info WT mock shoot apical meristem Original data
377 Col-0 mbs1-1 HL 0h 0.56 >More info 0.52 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
378 Col-0 +ABA LF 0.44 >More info 0.64 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
379 seedling 24h after Gamma WT 0.49 >More info 0.59 >More info seedling day 2 unirradiated WT 24h Original data
380 WT +elf18 2h 0.51 >More info 0.56 >More info WT untreated elf18 Original data GEO bulk
381 20h Col-0 0.62 >More info 0.45 >More info 00h Col-0 Original data GEO bulk
382 35S:RPS4 rrs1-11 8h -0.63 >More info -0.44 >More info 35S:RPS4 8h leaves Original data
383 camta1/2/3 warm 0.60 >More info 0.47 >More info WT warm entire aerial part Original data GEO bulk
384 anac017-2 H2O2 3h -0.69 >More info -0.38 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
385 Got7 UV 0.47 >More info 0.60 >More info Got7 mock UV seedling Original data
386 35S-MIF1 light grown 0.49 >More info 0.58 >More info Light-grown WT control Original data GEO bulk
387 csn3-1 light 0.51 >More info 0.55 >More info WT light Original data GEO bulk
388 ORS1 induced 0.60 >More info 0.46 >More info mock-induced rosette leaves Original data GEO bulk
389 irradiated leaf (cmt 1d) 0.69 >More info 0.37 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
390 gpa1 -ABA GC -0.51 >More info -0.55 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
391 Selenate (root) 0.61 >More info 0.45 >More info Ws (root) Original data GEO bulk
392 Root Selenate 0.61 >More info 0.45 >More info Root control 40 micromolar selenate Root Original data GEO bulk
393 aox1a:rpoTmp untreated 0.50 >More info 0.56 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
394 Dark 3day ivd 0.52 >More info 0.54 >More info 0h ivd Original data
395 WT 3h -P 0.64 >More info 0.42 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
396 inhibitor A Treated 0.42 >More info 0.64 >More info Negative Control Original data GEO bulk
397 rosettes WT drought 0.49 >More info 0.57 >More info rosettes WT watered Original data GEO bulk
398 atgsnor1-1-avrB-6h 0.42 >More info 0.64 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
399 aerial organ callus inducing medium 12 h 0.48 >More info 0.58 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
400 Dex-rga(delta17) 4h GA4+DEX -0.49 >More info -0.57 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
401 atmyc2 cop1 Seedling BL 0.48 >More info 0.58 >More info WT Seedling BL Original data GEO bulk
402 spx1 spx2 complete 0.54 >More info 0.51 >More info WT complete seedlings Original data
403 short 8-degree- 0.61 >More info 0.44 >More info control short Original data GEO bulk
404 Mutant nph4-1_arf19-1 0.60 >More info 0.45 >More info Col Original data GEO bulk
405 SCR-GR Time 12H Dex 0.63 >More info 0.42 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
406 SCR-GR Time 1H Dex 0.66 >More info 0.39 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
407 Col-0 overexpressing At1g54160 control 0.79 >More info 0.26 >More info WT no treatement Original data GEO bulk
408 At1g54160 ox 0.79 >More info 0.26 >More info Col-0 Original data GEO bulk
409 short 14-degree- 0.49 >More info 0.56 >More info control short Original data GEO bulk
410 cell culture 4 h phytoprostane A1 0.37 >More info 0.68 >More info cell culture 4 h control Original data GEO bulk
411 miR393 0h -0.43 >More info -0.62 >More info WT 0h Leaf tissue Original data GEO bulk
412 oas-a1.1 Cd 18h 0.48 >More info 0.57 >More info Cd 18h root Root Original data GEO bulk
413 A6 mutant 0.63 >More info 0.41 >More info WT rosette leaves Rosette leaves Original data GEO bulk
414 leaf rlt1-1rlt2-1 -0.59 >More info -0.45 >More info leaf Col-0 leaf Original data GEO bulk
415 hira-root -0.67 >More info -0.37 >More info WT-root root Original data
416 24h +Pi -0.71 >More info -0.33 >More info 24h -Pi root Original data GEO bulk
417 abi4-102 (II) 0.63 >More info 0.41 >More info Col (II) rosette Original data GEO bulk
418 pnp1-1 3h -P 0.54 >More info 0.50 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
419 Elevated CO2 expanding leaf 0.62 >More info 0.42 >More info Ambient CO2 expanding leaf expanding leaf Original data
420 GST 4 h (leaf) 0.37 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
421 Col laser microdissected 5 dpi 0.47 >More info 0.57 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
422 msh1 recA3 untreated 0.47 >More info 0.57 >More info WT untreated above-ground parts Original data GEO bulk
423 Transgenic LEC2GR Seedling 1h Dex 0.48 >More info 0.56 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
424 current injection 0.37 >More info 0.67 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
425 seedling 1.5h after Gamma atm-1 0.44 >More info 0.60 >More info seedling day 1 unirradiated atm-1 1.5h Original data
426 Col-0 5dpi 0.64 >More info 0.39 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
427 hypoxic 0.52 >More info 0.51 >More info WT aerobic hypoxia Original data GEO bulk
428 pif3 Dark 0h -0.66 >More info -0.37 >More info WT Dark 0h etiolated seedling Original data GEO bulk
429 WT chitooctaose 0.55 >More info 0.48 >More info WT water Original data GEO bulk
430 Mutant bri1 -0.62 >More info -0.41 >More info Ws-2 Original data Comparison of plant hormone related mutant
431 Lipopolysaccaride4 h (leaf) 0.51 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
432 WT+sucrose 0.49 >More info 0.54 >More info WT+no sugars rosette leaves Original data GEO bulk
433 rao2 H2O2 3h -0.35 >More info -0.68 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
434 WT seedlings MV 0.43 >More info 0.60 >More info WT seedlings control Seedlings Original data GEO bulk
435 TiO2 germinant -0.60 >More info -0.42 >More info Millipore Water germinant TiO2 seedling Original data
436 rosettes myoox drought 0.54 >More info 0.48 >More info rosettes myoox watered Original data GEO bulk
437 root cells cortex 140mM NaCl 20 hours 0.60 >More info 0.42 >More info root cells cortex standard 1 hour root cells cortex Original data
438 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.64 >More info 0.38 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
439 WT +Pep2 2h 0.67 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
440 ARR21C-ox 0.63 >More info 0.39 >More info Col-0 Original data ARR21C overexpression
441 IRP1-OE-Ctrl--root 0.52 >More info 0.50 >More info COL-0-Ctrl--root root Original data
442 Col whole leaf 6hpi 0.49 >More info 0.53 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
443 JMJ24 knockout 0.61 >More info 0.40 >More info WT Original data GEO bulk
444 Heat shock 20%Inhibition 0.58 >More info 0.43 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
445 JA 3h 0.28 >More info 0.73 >More info EtOH 3h 3hr Original data GEO bulk
446 COL-0-Fe--shoot 0.46 >More info 0.55 >More info COL-0-Ctrl--shoot shoot Original data
447 35S:LOB-GR DEX 0.57 >More info 0.43 >More info Col DEX dexamethasone seedling Original data GEO bulk
448 irradiated leaf (WT 1d) 0.59 >More info 0.41 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
449 mbd6 mutant thaliana 10-day-old seedling 0.61 >More info 0.39 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
450 FarRed Light 4 h 0.63 >More info 0.37 >More info White Light 4 h Original data Light treatments
451 tor mutant 0.59 >More info 0.41 >More info WT (Col) none seedlings Original data GEO bulk
452 Mutant ein2(leaf) -0.57 >More info -0.43 >More info Col-0 (leaf) Original data GEO bulk
453 root cells endodermis 140mM NaCl 8 hours 0.70 >More info 0.30 >More info root cells endodermis standard 1 hour root cells endodermis Original data
454 cca1-lhy before light -0.75 >More info -0.25 >More info before light whole seedlings Original data GEO bulk
455 tt4 0.62 >More info 0.38 >More info Col-0 aerial part Original data
456 OE-HRA1 NS  0.63 >More info 0.37 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
457 AAF-OX 0.65 >More info 0.35 >More info Col-0 Rosette leaf Original data GEO bulk
458 ubc13A-es -0.53 >More info -0.47 >More info Col-es root Original data GEO bulk
459 FOX line K16331 0.47 >More info 0.53 >More info empty vector control (T3) FOX lines Original data GEO bulk
460 Laer pretreat JA Flg22 0h 0.46 >More info 0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
461 WT NAA 2h -0.43 >More info -0.57 >More info WT 0h Leaf tissue Original data GEO bulk
462 6h +Pi -0.42 >More info -0.58 >More info 6h -Pi root Original data GEO bulk
463 amiRAP hypoxic -0.37 >More info -0.63 >More info hypoxic hypoxia Original data GEO bulk
464 WT-Dry 0.44 >More info 0.56 >More info WT-CK dehydration treatment 1h Original data
465 total mRNA eif3k 0.50 >More info 0.49 >More info total mRNA WT aerial part Original data GEO bulk
466 Mutant nph4-1 0.51 >More info 0.48 >More info Col Original data GEO bulk
467 pad4-PsmES4326-24hpi -0.45 >More info -0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
468 WT cold 0.38 >More info 0.61 >More info WT control All aerial tissue Original data GEO bulk
469 Col leaves 120h LT 0.60 >More info 0.38 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
470 root cells cortex 140mM NaCl 8 hours 0.58 >More info 0.40 >More info root cells cortex standard 1 hour root cells cortex Original data
471 SPT4-R3 seedlings0 DAS 0.51 >More info 0.47 >More info Col-0 seedlings0 DAS seedlings Original data
472 SIZ 0.65 >More info 0.33 >More info COL seedling Original data
473 swn-7 -0.54 >More info -0.44 >More info Col whole plant Original data GEO bulk
474 gpa1 +ABA GC -0.56 >More info -0.42 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
475 t-zeatin 0.5 h -0.26 >More info -0.72 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
476 long 12-degree- 0.48 >More info 0.50 >More info control long Original data GEO bulk
477 Atwrky63 -0.74 >More info -0.23 >More info Col0 none leaf Original data GEO bulk
478 S14-150 0.55 >More info 0.42 >More info wt Original data GEO bulk
479 Norflurazon 0.56 >More info 0.41 >More info Col-0 Original data GEO bulk
480 cs26 short-day -0.57 >More info -0.40 >More info Leaves-WT-SD leaf Original data GEO bulk
481 dor control 0.62 >More info 0.35 >More info WT control Original data GEO bulk
482 9m.KCl 0.52 >More info 0.45 >More info To. KCl 14 day old Roots Original data GEO bulk
483 Norflurazon 0.56 >More info 0.41 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
484 WT 1mM phosphate 8 hours. -0.51 >More info -0.46 >More info WT control (not supplemented). Original data
485 KAN1-GR 30min 0.58 >More info 0.39 >More info KAN1-GR 0min Original data GEO bulk
486 G3P 0.82 >More info 0.15 >More info Mock distal leaves Original data GEO bulk
487 Cycloheximide 3 h 0.43 >More info 0.54 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
488 Octopus overexpressor 35SDYG25 0.46 >More info 0.51 >More info WS Original data GEO bulk
489 wt systemic wounding 0.45 >More info 0.52 >More info wt control leaves Original data GEO bulk
490 9 hr Hypoxia 1 hr recovery IP RNA 0.44 >More info 0.53 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
491 light-hs 0.56 >More info 0.40 >More info light-control seedling Original data
492 C24-3h IAA 0.58 >More info 0.38 >More info C24-0h IAA whole plant Original data GEO bulk
493 Mutant iaa5_6_19 0.31 >More info 0.65 >More info Col Original data GEO bulk
494 pmr4-1 powdery mildew 0.39 >More info 0.57 >More info WT powdery mildew uninoculated Original data GEO bulk
495 des1 Na2S -0.64 >More info -0.31 >More info WT Na2S Na2S leaf Original data GEO bulk
496 WT leaves - Fe 0.60 >More info 0.35 >More info WT leaves + Fe Leaves Original data GEO bulk
497 Bur-0-1h IAA 0.59 >More info 0.36 >More info Bur-0h IAA whole plant Original data GEO bulk
498 GO5; harvested 8h continiously maintained in high
CO2;		 -0.45 >More info -0.50 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
499 toc1-1-65hr 0.68 >More info 0.26 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
500 pnp1-1 1wk -P 0.67 >More info 0.27 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
501 seedlings +5AC 0.53 >More info 0.41 >More info control seedlings 10-day old whole seedling Original data GEO bulk
502 tunicamycin -0.51 >More info -0.43 >More info DMF Original data GEO bulk
503 ALC Toc1 light-light EtOH -0.65 >More info -0.29 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
504 Whole root - low pH 12H 0.53 >More info 0.41 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
505 MG132 3 h 0.59 >More info 0.35 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
506 scl3 0.75 >More info 0.19 >More info Col-0 whole root Original data GEO bulk
507 Mock pft1 leaf 0.37 >More info 0.57 >More info Mock Col-0 leaf water leaf Original data GEO bulk
508 Nicotinamide-53hr 0.42 >More info 0.52 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
509 JA 0.24 >More info 0.70 >More info Col-0 mock Whole seedling Original data GEO bulk
510 35S:VND7-VP16-GR+CHX 0.33 >More info 0.61 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
511 control leaf (cmt 5d) 0.35 >More info 0.59 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
512 Differentiation 24h 0.54 >More info 0.39 >More info Differentiation 0h leaves Original data
513 35S:GIF -0.57 >More info -0.36 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
514 sid2-1 warm -0.36 >More info -0.57 >More info WT warm entire aerial part Original data GEO bulk
515 bZIP1ko mutant N+Light+ 0.68 >More info 0.24 >More info WT-sib N+Light+ whole plant Original data GEO bulk
516 mutant acs6E (single mutant) 0.53 >More info 0.39 >More info col control (single mutant) Original data GEO bulk
517 Col-7 Sucrose 0.39 >More info 0.53 >More info col-7 Original data GEO bulk
518 AsAKiin11 T1 0.37 >More info 0.55 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
519 bbx24 in Simulated Shade -0.70 >More info -0.22 >More info WT in simulated shade shade seedling Original data
520 P-chlorophenoxy- isobutyric acid 3 h 0.50 >More info 0.42 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
521 Cd 24h root -0.41 >More info -0.51 >More info WT-Untreated Shoot Original data GEO bulk
522 dense canopy 0.41 >More info 0.51 >More info single (control) petiole Original data GEO bulk
523 Col-O high light 0.29 >More info 0.63 >More info Col-O bule light Original data GEO bulk
524 Whole root - low pH 24H 0.40 >More info 0.51 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
525 35S::KLU 0.33 >More info 0.58 >More info WT Shoot Original data
526 L2.5 mutant -0.67 >More info -0.23 >More info Wt Original data GEO bulk
527 WUS-GR DEX Cycloheximide DEX -0.64 >More info -0.26 >More info WUS-GR DEX Cycloheximide Cycloheximide Dexamethasone Original data GEO bulk
528 WT Shoot-Pi 0.52 >More info 0.38 >More info WT Shoot+Pi shoots Original data GEO bulk
529 0h light (+Lincomycin) 0.64 >More info 0.26 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
530 naxillin 3h 0.50 >More info 0.40 >More info before treatment naxillin root Original data GEO bulk
531 Methyl Jasmonate 0.5 h 0.25 >More info 0.65 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
532 Stem wox4 -0.36 >More info -0.54 >More info Stem Col first internode of stem Original data GEO bulk
533 Mutant iaa17-6 0.50 >More info 0.39 >More info Col Original data GEO bulk
534 Col-0 INA 6d 0.63 >More info 0.26 >More info Col-0 MOCK 6d Original data GEO bulk
535 WT Red light 1h 0.80 >More info 0.09 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
536 root cells endodermis 140mM NaCl 48 hours 0.65 >More info 0.24 >More info root cells endodermis standard 1 hour root cells endodermis Original data
537 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.79 >More info -0.10 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
538 35:SUB1A 0.38 >More info 0.51 >More info WT whole seedling Original data GEO bulk
539 amiR-tor induced 3d 0.39 >More info 0.50 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
540 WT+chitooctaose 0.32 >More info 0.57 >More info WT+water chitooctaose seedlings Original data GEO bulk
541 Wounding Stress3 h (root) -0.56 >More info -0.32 >More info Stress mock 3 h (root) Original data Stress treatments
542 chl1-9 10mM NH4NO3 -0.54 >More info -0.34 >More info col 10mM NH4NO3 Root Original data
543 root cells stele 140mM NaCl 3 hours 0.56 >More info 0.32 >More info root cells stele standard 1 hour root cells stele Original data
544 rao1-1 3h antimycin A -0.61 >More info -0.27 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
545 Ws seedlings 0.69 >More info 0.19 >More info ged1 seedlings Original data GEO bulk
546 ged1 seedlings -0.69 >More info -0.19 >More info Ws seedlings Original data GEO bulk
547 express RfBP -0.68 >More info -0.19 >More info WT green part of the whole plant Original data GEO bulk
548 sav1-1 light 0.62 >More info 0.25 >More info Col-0 light seedlings Original data GEO bulk
549 KCl germinant -0.59 >More info -0.28 >More info Millipore Water germinant KCl seedling Original data
550 P35S:rGRF3 0.50 >More info 0.37 >More info WS Original data GEO bulk
551 plant (Col-0) 4h phytoprostane A1 0.36 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
552 Col-0 +ABA GC 0.35 >More info 0.52 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
553 shoot-10 μM DEX- 3 hr 0.37 >More info 0.50 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
554 HSP90 Reduced hsp90.2 0.56 >More info 0.30 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
555 Homozygous-AtcesA6 0.30 >More info 0.56 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
556 MYB29 OE 0.30 >More info 0.56 >More info WT for MYB29/76 Original data GEO bulk
557 Mutant ufo-1(flower) 0.60 >More info 0.26 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
558 shoots WT 0uM Fe 0.74 >More info 0.12 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
559 SCR-GR Time 3H Dex 0.63 >More info 0.23 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
560 rpl24 total 0.53 >More info 0.32 >More info WT total seedling shoot/aerial seedling Original data
561 C2 leaf-drought 0.32 >More info 0.53 >More info C2 leaf-well watered Original data GEO bulk
562 wavy 0.29 >More info 0.56 >More info WT Original data GEO bulk
563 pab polysome 0.33 >More info 0.52 >More info WT polysome seedling shoot/aerial seedling Original data
564 Shoot -P -0.75 >More info -0.10 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
565 ALC Toc1 light-light Mock -0.61 >More info -0.24 >More info Col light-light Mock no ethanol Original data GEO bulk
566 penta Pst DC3000 12hpi 0.59 >More info 0.26 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
567 rsa3-1 Na 24h 0.51 >More info 0.33 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
568 sps1 -0.52 >More info -0.32 >More info WT seedling Original data GEO bulk
569 WT+mannitol 0.67 >More info 0.17 >More info WT+no sugars rosette leaves Original data GEO bulk
570 FarRed Light 45min -0.28 >More info -0.56 >More info White Light 45min Original data Light treatments
571 root cells stele 140mM NaCl 8 hours 0.61 >More info 0.23 >More info root cells stele standard 1 hour root cells stele Original data
572 ms1 unpollinated -0.62 >More info -0.22 >More info WT 8h-pollinated pistil Original data GEO bulk
573 shoot control pSultr2:2 -0.73 >More info -0.11 >More info shoot control total Original data GEO bulk
574 Col-0 24hpi A. brassicicola 0.82 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
575 rdr6-11 ein5-1 ski2-3 -0.63 >More info -0.20 >More info Col-0 aerial tissue Original data
576 prmt5-5 -0.66 >More info -0.17 >More info WT Col continuous light Aerial tissue Original data GEO bulk
577 chito-octamer 0.29 >More info 0.54 >More info Col Mock Original data GEO bulk
578 fls1-3 0.33 >More info 0.50 >More info Col-0 Rosette leaves Original data
579 Hydrogen Peroxide 500 uM 0.21 >More info 0.62 >More info Control RB and PER Hydrogen Peroxide Original data
580 +GA-60mins -0.56 >More info -0.26 >More info -60mins whole plant Original data GEO bulk
581 phr1 phl1 Root-Pi 0.32 >More info 0.50 >More info WT Shoot+Pi roots Original data GEO bulk
582 agb1 gpa1 -ABA GC -0.28 >More info -0.54 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
583 OH1 0.28 >More info 0.54 >More info Col-0 leaves Original data GEO bulk
584 cov1 cov2 stem Base 0.57 >More info 0.25 >More info WT stem Base stem Base Original data GEO bulk
585 Lip0 UV 0.73 >More info 0.09 >More info Lip0 mock UV seedling Original data
586 toc1-1-61hr 0.61 >More info 0.21 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
587 gtl1 0.54 >More info 0.27 >More info WT trichome Original data GEO bulk
588 gul2-1 mutant 0.52 >More info 0.29 >More info WT 7 day-old whole seedlings Original data
589 gtl1-1 0.54 >More info 0.27 >More info WT trichome Original data GEO bulk
590 pistil 8.0HAP 0.65 >More info 0.16 >More info unpollinated pistil pistil Original data GEO bulk
591 abi4-102 (I) 0.60 >More info 0.20 >More info Col (I) rosette Original data GEO bulk
592 seedling 3h after Gamma WT 0.55 >More info 0.25 >More info seedling day 1 unirradiated WT 3h Original data
593 penta mutant (higher order mutant) -0.50 >More info -0.30 >More info col control (higher order mutant) Original data GEO bulk
594 iae1 -0.54 >More info -0.26 >More info B179 Original data GEO bulk
595 vte2 leaves 48h LT 0.56 >More info 0.24 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
596 Starch sheath 5 days MS incubation 0.25 >More info 0.55 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
597 +1.6 mM Tween 20 1 h. 0.19 >More info 0.61 >More info +distilled water 1 h. Original data GEO bulk
598 root cells endodermis 140mM NaCl 20 hours 0.55 >More info 0.24 >More info root cells endodermis standard 1 hour root cells endodermis Original data
599 WT-drought 0.53 >More info 0.26 >More info WT-control leaf Original data
600 Shoot P recovery 0.61 >More info 0.18 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
601 root cells endodermis 140mM NaCl 32 hours 0.59 >More info 0.20 >More info root cells endodermis standard 1 hour root cells endodermis Original data
602 PRR5-VP 6h light on 0.52 >More info 0.27 >More info WT 6h light on whole plant Original data GEO bulk
603 C58 35dpi 0.63 >More info 0.16 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
604 glk1 glk2 GLK1-GR +DEX 24h -0.59 >More info -0.20 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
605 ced1 -0.27 >More info -0.52 >More info WT PEG 6hr seedlings Original data GEO bulk
606 gpa1-4/agb1-2 clean-air 2d 0.26 >More info 0.53 >More info Col clean-air 2d clean-air Original data GEO bulk
607 35S::HRE2 Aerobic -0.57 >More info -0.22 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
608 GV3101 6dpi 0.59 >More info 0.19 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
609 pepr1-1 Pepr2-3 untreated 0.60 >More info 0.18 >More info WT untreated untreated Original data GEO bulk
610 Cold Stress 24 h (shoot) 0.23 >More info 0.55 >More info Stress mock 24 h (shoot) Original data Stress treatments
611 rosette Light Wounded 0.13 >More info 0.65 >More info rosette Light Control Original data GEO bulk
612 siliques AtHb1 control 0.26 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
613 agb1 +ABA LF -0.57 >More info -0.21 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
614 C24 UV1 -0.64 >More info -0.13 >More info C24 mock UV seedling Original data
615 ex1ex2flu dark 8hours/30 minute light -0.66 >More info -0.10 >More info col dark 8hours/30 minute light Original data GEO bulk
616 Red Light 45min -0.65 >More info -0.11 >More info White Light 45min Original data Light treatments
617 DUO1 induced 6h -0.52 >More info -0.24 >More info 6hr-not-induced whole plant Original data GEO bulk
618 tumour 0.62 >More info 0.14 >More info non-tumor tumour Original data GEO bulk
619 MPK6 ox Shoot Hypoxia 0.67 >More info 0.09 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
620 toc1-1-81hr 0.58 >More info 0.18 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
621 atmyc2 Seedling BL 0.08 >More info -0.83 >More info WT Seedling BL Original data GEO bulk
622 Callus 0.58 >More info 0.16 >More info Control for tissue data callus Original data GEO bulk
623 sid2-2 mock 0.64 >More info 0.10 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
624 arr10 arr12 -0.61 >More info -0.13 >More info DMSO--WT DMSO roots Original data GEO bulk
625 cys-c1 leaf -0.66 >More info -0.08 >More info Leaf-WT leaves Original data GEO bulk
626 syd-2 0.51 >More info 0.23 >More info Ler Original data GEO bulk
627 MYB46-GR DEX 0.15 >More info 0.59 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
628 ex1 flu dark 8hours/30 minute light -0.54 >More info -0.19 >More info col dark 8hours/30 minute light Original data GEO bulk
629 Mutant ag-12(flower) 0.60 >More info 0.13 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
630 dcl1-7 0.57 >More info 0.16 >More info Ler Original data GEO bulk
631 MYB76 OE 0.16 >More info 0.57 >More info WT for MYB29/76 Original data GEO bulk
632 P. infestans 6 h (leaf) 0.87 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
633 Full AC2 T1 -0.50 >More info -0.22 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
634 eif3h 0.51 >More info 0.21 >More info WT Original data GEO bulk
635 HairpinZ 4 h (leaf) 0.75 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
636 light -0.54 >More info -0.18 >More info dark light seedling Original data GEO bulk
637 C58 6dpi 0.63 >More info 0.09 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
638 tt4 -0.54 >More info -0.18 >More info WT aerial region Original data GEO bulk
639 Ambient CO2 LIMITING N DAY 0.50 >More info 0.22 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
640 rosettes drought 0.09 >More info 0.63 >More info rosettes watered Original data GEO bulk
641 ptpks2 0.10 >More info 0.62 >More info Col-WT leaves Original data GEO bulk
642 bri1-5 mutant -0.66 >More info -0.05 >More info WT 7 day-old whole seedlings Original data
643 Sha-3h IAA 0.54 >More info 0.17 >More info Sha-0h IAA whole plant Original data GEO bulk
644 Uniconazole 12 h 0.55 >More info 0.16 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
645 Te CA -0.51 >More info -0.20 >More info Col CA Leaves Original data
646 ABA control 0.21 >More info 0.50 >More info No ABA control Original data GEO bulk
647 chl1-5 10mM NH4NO3 -0.54 >More info -0.16 >More info col 10mM NH4NO3 Root Original data
648 LFYGR -0.66 >More info -0.04 >More info WT shoot apices Original data GEO bulk
649 seed germinating in countinuous light 24h SL 0.03 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
650 OE WRKY40.4 -0.58 >More info -0.12 >More info OE WRKY40.4 none leaf Original data GEO bulk
651 pvip1 pvip2 seedling 0.72 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
652 ABA JA 3h 0.08 >More info 0.62 >More info EtOH 3h 3hr Original data GEO bulk
653 Tsu-1 -Fe 24h 0.20 >More info 0.50 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
654 Tsu -Fe 24h Roots 0.20 >More info 0.50 >More info Tsu +Fe 24h Roots Original data GEO bulk
655 col 24h4c set4 0.16 >More info 0.53 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
656 Col-0 Mock Shade -0.51 >More info -0.18 >More info Col-0 Mock WL seedlings Original data
657 Aerobic e1 ate2 0.58 >More info 0.11 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
658 CHLD reduction 0.54 >More info 0.14 >More info Col-0 dex green tissue Original data GEO bulk
659 F1 whole seedlings root 0.56 >More info 0.12 >More info Col whole seedlings root Seedlings Original data GEO bulk
660 Uniconazole 3 h 0.51 >More info 0.17 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
661 des1.1 0.14 >More info 0.54 >More info Leaves-WT leaf Original data GEO bulk
662 shoot control pKAT1 -0.59 >More info -0.09 >More info shoot control total Original data GEO bulk
663 root columella root cap -S -0.50 >More info -0.18 >More info root columella root cap pH5.7 Original data GEO bulk
664 bZIP1ko mutant N-Light- -0.58 >More info -0.10 >More info WT-sib N-Light- whole plant Original data GEO bulk
665 dcl2-1 0.18 >More info 0.50 >More info Col-0 Original data GEO bulk
666 iron minus 1 h -0.52 >More info -0.15 >More info iron +1 h root Original data GEO bulk
667 chito-tetramer 0.14 >More info 0.53 >More info Col Mock Original data GEO bulk
668 nas4x leaves + Fe 0.69 >More info -0.02 >More info WT leaves + Fe Leaves Original data GEO bulk
669 12h-DC3000 hrpA -0.56 >More info -0.10 >More info 12h-DC3000 leaves Original data GEO bulk
670 elf3-7-23ºC 0.10 >More info 0.56 >More info WT-23ºC Original data GEO bulk
671 CCA1-ox 6am non-polysomal 0.15 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
672 elevated CO2 low Mg shoot 0.58 >More info 0.08 >More info atmospheric CO2 low Mg shoot Shoot Original data
673 WT Shoot Hypoxia 0.51 >More info 0.14 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
674 SA Treated 0.57 >More info 0.08 >More info Water Original data GEO bulk
675 AtMYB30-ox 2-4h Xanthomonas 0.54 >More info 0.10 >More info WT 2-4h Xanthomonas Original data GEO bulk
676 iron minus 0 h 0.51 >More info 0.13 >More info iron +0 h root Original data GEO bulk
677 bam7 untreated -0.50 >More info -0.14 >More info WT untreated none shoot Original data
678 Dark 6h hml -0.62 >More info -0.02 >More info 0h hml Original data
679 pad4-est1b-1-doublemutant 0.65 >More info -0.01 >More info pad4-mutant developed rosette leaves Original data GEO bulk
680 15m.KNO3 0.51 >More info 0.13 >More info To. KNO3 14 day old Roots Original data GEO bulk
681 Dark 6h wt -0.62 >More info -0.02 >More info 0h wt Original data
682 npr1-3 MOCK 48h -0.12 >More info -0.52 >More info Col-0 MOCK 48h Original data GEO bulk
683 Col PSTDC3000 24h 0.76 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
684 Dark 1day wt -0.69 >More info 0.06 >More info 0h wt Original data
685 4tga mock 0.62 >More info 0.00 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
686 Kas -Fe 48h Shoots 0.54 >More info 0.07 >More info Kas +Fe 24h Shoots Original data GEO bulk
687 Dark 1day hml -0.66 >More info 0.05 >More info 0h hml Original data
688 iron minus 24h -0.52 >More info -0.08 >More info iron +24h root Original data GEO bulk
689 cngc1-3 0.10 >More info 0.50 >More info Col-0 root Original data GEO bulk
690 ABA SA 3h 0.03 >More info 0.57 >More info EtOH 3h 3hr Original data GEO bulk
691 hda9 dryseed 0.52 >More info 0.07 >More info Col dryseed dry seeds Original data
692 ABA 1 h 0.05 >More info 0.54 >More info Mock 1 h Original data Basic hormone treatment of seedlings
693 triplod male excess 0.51 >More info 0.08 >More info tetraploid Original data GEO bulk
694 Rsch 8h 0.08 >More info 0.51 >More info Rsch CA Leaves Original data
695 vte2 leaves 120h LT 0.53 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
696 Ws-2 high light 0.03 >More info 0.54 >More info Ws-2 low light Original data GEO bulk
697 HSP90 Reduced Salk hsp90.2 0.55 >More info 0.01 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
698 Rose Bengal 0.5 uM 0.03 >More info 0.53 >More info Control RB and PER Rose Bengal Original data
699 MYB51 OE -0.60 >More info 0.04 >More info WT for ATR1/MYB51 Original data GEO bulk
700 RRE1 -0.51 >More info -0.03 >More info Col C Original data GEO bulk
701 upf2i -0.50 >More info -0.04 >More info WT whole plant Original data GEO bulk
702 vtc2-1 -0.52 >More info -0.02 >More info Col-0 whole plant Original data GEO bulk
703 HSP90 Reduced Salk hsp90.3 0.55 >More info -0.01 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
704 60m light -0.06 >More info 0.60 >More info before light whole seedlings Original data GEO bulk
705 Root -P -0.52 >More info -0.00 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
706 calcicole ecotype Cal-0 0.55 >More info -0.03 >More info Col-4 1 mM CaCl2 Original data GEO bulk
707 gpa1 -ABA LF 0.02 >More info 0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
708 Polysomal RNA 35S:HF-RPL18 0.53 >More info -0.02 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
709 agb1 -ABA GC 0.07 >More info -0.58 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
710 lec2-1 12 DAF Seed -0.54 >More info 0.04 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
711 Heat and anoxia -0.02 >More info 0.52 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
712 Dark 1day ivd -0.55 >More info 0.06 >More info 0h ivd Original data
713 Homozygous-AtcesA4 -0.04 >More info 0.53 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
714 root longitudinal zone-2 -Fe -0.07 >More info 0.54 >More info root longitudinal zone-2 standard Original data GEO bulk
715 eto1-4 + AVG -0.53 >More info 0.09 >More info eto1-4 whole seedling Original data GEO bulk
716 Shoot apex inflorescence (after bolting) -0.29 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
717 opr3 OPDA 2 h -0.19 >More info 0.55 >More info opr3 0 h Original data GEO bulk
718 Atss3 Dark4 0.50 >More info -0.14 >More info Atss3 Dark0.5 Original data GEO bulk
719 Red/FR Light45min -0.39 >More info 0.75 >More info FarRed Light 45min Original data Light treatments
720 WT leaf-drought -0.14 >More info 0.50 >More info WT leaf-well watered Original data GEO bulk
721 Mh0 UV -0.53 >More info 0.18 >More info Mh0 mock UV seedling Original data
722 anac017-2 water 3h -0.51 >More info 0.17 >More info WT water 3h 3h_water Original data GEO bulk
723 hai1-2 low water potential -0.59 >More info 0.26 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
724 bri1-116 -0.40 >More info 0.73 >More info Col seedling Original data GEO bulk
725 WT 3H Cold -0.54 >More info 0.32 >More info WT control Original data GEO bulk
726 Light 3day hml -0.65 >More info 0.46 >More info 0h hml Original data
727 rao2 water 3h 0.51 >More info -0.32 >More info WT water 3h 3h_water Original data GEO bulk
728 iron minus 6 h -0.61 >More info 0.43 >More info iron +6 h root Original data GEO bulk
729 high R/FR JA spray -0.51 >More info 0.48 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk