4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 5-Triiodobenzoic acid3 h
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List of experiments correlated with "5-Triiodobenzoic acid3 h"  Help Download transcriptome of top 30
Score Experiment Correlation from
5-Triiodobenzoic acid3 h		 Correlation to
5-Triiodobenzoic acid3 h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 5-Triiodobenzoic acid3 h 1.00 >More info 1.00 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
2 inhibitor B Treated 0.89 >More info 0.86 >More info Negative Control Original data GEO bulk
3 Phytoprostane A1 4 h 0.88 >More info 0.85 >More info Col-0 Original data GEO bulk
4 6-trichlorophenoxyacetic acid 3 h 0.83 >More info 0.88 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
5 TNT-seedlings 0.85 >More info 0.86 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
6 IAA/inhibitor B Treated 0.86 >More info 0.84 >More info IAA Treated Original data GEO bulk
7 AgNO3 3 h 0.82 >More info 0.86 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
8 PNO8 3 h 0.78 >More info 0.88 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
9 plant (Col-0) 4h phytoprostane A1 0.85 >More info 0.79 >More info plant (tga2-5-6) 4h control Original data GEO bulk
10 plant (tga2-5-6) 4h phytoprostane A1 0.84 >More info 0.79 >More info plant (tga2-5-6) 4h control Original data GEO bulk
11 WT+H2O2 0.77 >More info 0.81 >More info WT H2O2 Original data GEO bulk
12 Fenclorim 4hr 0.81 >More info 0.77 >More info Acetone 4hr root Original data GEO bulk
13 SA 0.84 >More info 0.72 >More info WT mock Whole seedling Original data GEO bulk
14 35S::PI ap3-3 35S::AP-GR +DEX 0.75 >More info 0.81 >More info 0hr DEX Original data GEO bulk
15 CMP 4hr 0.81 >More info 0.75 >More info Acetone 4hr root Original data GEO bulk
16 Ibuprofen 3 h 0.72 >More info 0.84 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
17 (Ws-2)+100 uM As 0.79 >More info 0.76 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
18 Col-0 low oxygen 0.82 >More info 0.73 >More info Col-0 control low oxygen root Original data GEO bulk
19 bbx24 in Simulated Shade -0.79 >More info -0.75 >More info WT in simulated shade shade seedling Original data
20 R. solani AG8 0.79 >More info 0.75 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
21 inhibitor A Treated 0.72 >More info 0.80 >More info Negative Control Original data GEO bulk
22 root Dosed gold 0.84 >More info 0.67 >More info root No gold .125 mM gold 24 h roots Original data
23 P-chlorophenoxy- isobutyric acid 3 h 0.61 >More info 0.90 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
24 0.125 mM gold 24 h 0.84 >More info 0.67 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
25 rcf1-1 cold 24h 0.71 >More info 0.77 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
26 Cocultivation 8 hrs root 0.78 >More info 0.70 >More info Mock cocultivation 8 hrs root Root Original data
27 dicamba 0.80 >More info 0.68 >More info WT mock whole seedling Original data GEO bulk
28 oligomycin 4 h 0.75 >More info 0.72 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
29 oligomycin 1 h 0.69 >More info 0.78 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
30 9 hr Hypoxia 1 hr recovery Total RNA 0.78 >More info 0.68 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
31 Naphthyl- phthalamic acid 3 h 0.61 >More info 0.84 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
32 (Col-0)+200 uM As 0.72 >More info 0.73 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
33 NJ15 0.70 >More info 0.74 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
34 Cycloheximide 3 h 0.73 >More info 0.71 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
35 Whole root - S 3H 0.67 >More info 0.76 >More info Whole root - S 0H Original data GEO bulk
36 flu 0.69 >More info 0.73 >More info WT Col Original data GEO bulk
37 (Col-0)+100 uM As 0.69 >More info 0.73 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
38 Chemically 0.62 >More info 0.80 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
39 DFPM 0.81 >More info 0.60 >More info control Original data GEO bulk
40 P.p 30hai 0.76 >More info 0.65 >More info At-Control roots Original data GEO bulk
41 Fenclorim 24hr 0.74 >More info 0.66 >More info Acetone 24hr root Original data GEO bulk
42 WT H2O2 3h 0.76 >More info 0.64 >More info WT water 3h 3h_H2O2 Original data GEO bulk
43 IAA/inhibitor A Treated 0.74 >More info 0.65 >More info IAA Treated Original data GEO bulk
44 Seedling KUA1-IOX est 0.72 >More info 0.66 >More info Seedling KUA1-IOX mock Original data
45 Shoot -Cs 0.53 >More info 0.85 >More info Control-shoot Original data GEO bulk
46 9 hr Hypoxia Total RNA 0.78 >More info 0.60 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
47 Propiconazole 3 h 0.57 >More info 0.81 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
48 WT seedlings MV 0.72 >More info 0.65 >More info WT seedlings control Seedlings Original data GEO bulk
49 Anoxia 0.74 >More info 0.63 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
50 chito-tetramer 0.71 >More info 0.64 >More info Col Mock Original data GEO bulk
51 WT 30μM arsenate 8 hours. 0.75 >More info 0.60 >More info WT control (not supplemented). Original data
52 flu over-tAPX 0.65 >More info 0.70 >More info WT Col Original data GEO bulk
53 WT AntimycinA 3h 0.66 >More info 0.68 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
54 Heat and anoxia 0.68 >More info 0.65 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
55 MG132 3 h 0.68 >More info 0.64 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
56 P.p 6hai 0.77 >More info 0.54 >More info At-Control roots Original data GEO bulk
57 cat2-2; 8h switch to ambient CO2 concentrations; 0.62 >More info 0.69 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
58 bak1-3 +Pep2 10h 0.72 >More info 0.59 >More info WT +Pep2 10h Pep2 Original data GEO bulk
59 Whole root - low pH 12H 0.68 >More info 0.63 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
60 Salicylic Acid 3 h 0.64 >More info 0.67 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
61 P.p 2.5hai 0.67 >More info 0.63 >More info At-Control roots Original data GEO bulk
62 9m.KCl 0.68 >More info 0.62 >More info To. KCl 14 day old Roots Original data GEO bulk
63 9 hr Hypoxia 1 hr recovery IP RNA 0.73 >More info 0.57 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
64 root cells endodermis 140mM NaCl 3 hours 0.66 >More info 0.63 >More info root cells endodermis standard 1 hour root cells endodermis Original data
65 P.p 10.5hai 0.70 >More info 0.59 >More info At-Control roots Original data GEO bulk
66 Selenate (root) 0.69 >More info 0.60 >More info Ws (root) Original data GEO bulk
67 Root Selenate 0.69 >More info 0.60 >More info Root control 40 micromolar selenate Root Original data GEO bulk
68 anac017-2 AntimycinA 3h -0.63 >More info -0.66 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
69 WT 3h -P 0.66 >More info 0.63 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
70 CeO2 germinant -0.58 >More info -0.71 >More info Millipore Water germinant CeO2 seedling Original data
71 gun1gun5 far-red pretreated -0.65 >More info -0.63 >More info WT far-red pretreated Original data GEO bulk
72 GO5; 8h switch to ambient CO2 concentrations; 0.55 >More info 0.73 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
73 CMP 24hr 0.75 >More info 0.53 >More info Acetone 24hr root Original data GEO bulk
74 Col-Luc WT 3h antimycin A 0.62 >More info 0.66 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
75 toc1-1-53hr 0.64 >More info 0.64 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
76 Root -K 0.59 >More info 0.69 >More info Control-root Original data GEO bulk
77 Whole root - low pH 24H 0.63 >More info 0.64 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
78 K starvation (root) 0.59 >More info 0.68 >More info Ws (root) Original data GEO bulk
79 safener treated 0.66 >More info 0.61 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
80 seedlings-week-old RECA1-overexpressing
transgenic		 0.65 >More info 0.62 >More info seedlings-week-old Col-0 seedlings Original data
81 seedling -S Exp 0.61 >More info 0.66 >More info seedling FN Exp seedling Original data
82 Sulfometuron EC50 0.66 >More info 0.61 >More info Carrier Original data GEO bulk
83 chito-octamer 0.61 >More info 0.65 >More info Col Mock Original data GEO bulk
84 toc1-1-85hr 0.62 >More info 0.64 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
85 Col-0 9 hpi A. brassicicola 0.61 >More info 0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
86 pepr1-1 Pepr2-3 +Pep2 2h -0.58 >More info -0.68 >More info WT +Pep2 2h Pep2 Original data GEO bulk
87 cell culture 4 h phytoprostane A1 0.61 >More info 0.65 >More info cell culture 4 h control Original data GEO bulk
88 Col ozone 3h 0.55 >More info 0.71 >More info Col clean-air 3h ozone Original data GEO bulk
89 ABA DFPM 0.72 >More info 0.54 >More info control Original data GEO bulk
90 6h +Pi -0.63 >More info -0.63 >More info 6h -Pi root Original data GEO bulk
91 Hydrogen Peroxide 500 uM 0.64 >More info 0.62 >More info Control RB and PER Hydrogen Peroxide Original data
92 whole roots -Fe 72 hour 0.69 >More info 0.57 >More info whole roots standard Original data GEO bulk
93 Fe starvation 72 h 0.69 >More info 0.57 >More info Control Original data GEO bulk
94 9 hr Hypoxia IP RNA 0.73 >More info 0.52 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
95 ahg1-1 0.70 >More info 0.54 >More info ABA control Original data GEO bulk
96 whole roots -Fe 48 hour 0.69 >More info 0.55 >More info whole roots standard Original data GEO bulk
97 B.cinerea 18 h infection 0.57 >More info 0.67 >More info Mock 18 h Original data Botrytis cinerea infection
98 Botrytis cinerea 18h 0.57 >More info 0.67 >More info control 18h Original data GEO bulk
99 toc1-1-49hr 0.66 >More info 0.57 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
100 Col-0 HS 0.60 >More info 0.63 >More info Col-0 control heat shocked seedling Original data GEO bulk
101 WT (Col-0) heat shock 0.60 >More info 0.63 >More info WT (Col-0) whole seedling Original data GEO bulk
102 Botrytis cinerea 48h 0.63 >More info 0.60 >More info control 48h Original data GEO bulk
103 coi1-2 0.71 >More info 0.51 >More info Col-0 mock Whole seedling Original data GEO bulk
104 WT NAA/flg 1h 0.63 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
105 sid2-2 9 hpi A. brassicicola 0.59 >More info 0.63 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
106 ani1 T0.5 -0.67 >More info -0.54 >More info WT T0.5 root tissue Original data GEO bulk
107 plant (Col-0) 4h OPDA 0.77 >More info 0.44 >More info plant (Col-0) 4h control Original data GEO bulk
108 Col upon hypoxia 6 hrs 0.73 >More info 0.48 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
109 Nicotinamide-53hr 0.63 >More info 0.58 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
110 OPDA 4 h 0.77 >More info 0.44 >More info Col-0 Original data GEO bulk
111 Nicotinamide-57hr 0.65 >More info 0.56 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
112 toc1-1-73hr 0.55 >More info 0.65 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
113 WT flg22 2h 0.64 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
114 cpctry 0.53 >More info 0.67 >More info Col Original data GEO bulk
115 arf2 mock 0.73 >More info 0.47 >More info Col mock Original data GEO bulk
116 embryo paclobutrazol 0.71 >More info 0.49 >More info embryo-control paclobutrazol embryo Original data GEO bulk
117 Mutant arf2 (etiol) 0.73 >More info 0.47 >More info Col (etiol) Original data GEO bulk
118 toc1-1-57hr 0.73 >More info 0.47 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
119 hira-root -0.67 >More info -0.52 >More info WT-root root Original data
120 anac017-2 water 3h 0.54 >More info 0.65 >More info WT water 3h 3h_water Original data GEO bulk
121 gai Control 0.68 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
122 cat2-short-day 2d 0.56 >More info 0.63 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
123 ein2-1 9 hpi A. brassicicola 0.54 >More info 0.64 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
124 Laer treat paclobutrazol (PAC) 0.66 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
125 Salt Stress 24 h (root) 0.63 >More info 0.55 >More info Stress mock 24 h (root) Original data Stress treatments
126 root stele 40 mM NaCls 0.72 >More info 0.46 >More info root stele Original data GEO bulk
127 Col0-PsmES4326-24hpi 0.57 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
128 toc1-1-65hr 0.64 >More info 0.53 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
129 dde2-2 9 hpi A. brassicicola 0.61 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
130 Col-0 2h NAA 0.68 >More info 0.49 >More info Col-0 6h MOCK Original data GEO bulk
131 Col-0 overexpressing At1g54160 control 0.68 >More info 0.49 >More info WT no treatement Original data GEO bulk
132 At1g54160 ox 0.68 >More info 0.49 >More info Col-0 Original data GEO bulk
133 Heat shock optimum 0.52 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
134 Ws HS 0.60 >More info 0.56 >More info Ws control heat shocked seedling Original data GEO bulk
135 Nicotinamide-81hr 0.62 >More info 0.54 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
136 35S:RPS4 eds1-2 8h -0.61 >More info -0.55 >More info 35S:RPS4 8h leaves Original data
137 WT Col-0 Bgh inoculated 0.52 >More info 0.64 >More info WT Col-0 Un-inoculated Original data GEO bulk
138 Primisulfuron EC50 0.59 >More info 0.57 >More info Carrier (primisulfuron) Original data GEO bulk
139 Mutant axr3-1 (IAA) 0.41 >More info 0.75 >More info Col (IAA) Original data GEO bulk
140 WT 2-4h Xanthomonas 0.59 >More info 0.56 >More info WT T0 Original data GEO bulk
141 GST NPP1 4 h (leaf) 0.58 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
142 DC3000 2 h (leaf) 0.62 >More info 0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
143 plant (tga2-5-6) 4h OPDA 0.71 >More info 0.44 >More info plant (tga2-5-6) 4h control Original data GEO bulk
144 JA 0.61 >More info 0.54 >More info Col-0 mock Whole seedling Original data GEO bulk
145 root cells cortex 140mM NaCl 3 hours 0.62 >More info 0.53 >More info root cells cortex standard 1 hour root cells cortex Original data
146 cop1 Seedling BL+ABA 0.62 >More info 0.53 >More info WT Seedling BL+ABA Original data GEO bulk
147 Triazolopyrimidine EC50 0.61 >More info 0.54 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
148 root endodermis and quiescent center 40 mM NaCl 0.62 >More info 0.53 >More info root endodermis and quiescent center Original data GEO bulk
149 Col-0 0h NAA 0.62 >More info 0.52 >More info Col-0 6h MOCK Original data GEO bulk
150 seedlings protease IV 0.52 >More info 0.62 >More info seedlings nontreated control whole seedling Original data
151 Col-0 flu HL 3h 0.60 >More info 0.54 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
152 WT flg22 1h 0.55 >More info 0.59 >More info WT 0h Leaf tissue Original data GEO bulk
153 Tsu -Fe 24h Roots 0.64 >More info 0.50 >More info Tsu +Fe 24h Roots Original data GEO bulk
154 Tsu-1 -Fe 24h 0.64 >More info 0.50 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
155 4C 1h 0.46 >More info 0.68 >More info 4C 0h Original data GEO bulk
156 seedlings +5AC 0.67 >More info 0.46 >More info control seedlings 10-day old whole seedling Original data GEO bulk
157 embryo ABA 0.67 >More info 0.46 >More info embryo-control ABA embryo Original data GEO bulk
158 Root -Cs 0.61 >More info 0.52 >More info Control-root Original data GEO bulk
159 root protoplasts 40 mM NaCl 0.64 >More info 0.49 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
160 GA4 3 h (ga1 seed) 0.76 >More info 0.37 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
161 C24 ozone 0.62 >More info 0.51 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
162 ataf1-1 mutant Col-0 Bgh inoculated 0.50 >More info 0.63 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
163 IMI 4mM 0.65 >More info 0.48 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
164 sicy-192 gun1-101 cotyledons 0.62 >More info 0.51 >More info WT cotyledons cotyledons Original data
165 AvrRpt2 Col-0 6hpi 0.59 >More info 0.53 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
166 Col-0 37C 0.53 >More info 0.59 >More info Col-0 22C Original data GEO bulk
167 oas-a1.1 Cd 18h 0.53 >More info 0.59 >More info Cd 18h root Root Original data GEO bulk
168 Leaf GLU1-KO 0.59 >More info 0.53 >More info Leaf Col(0) rosette leaves Original data GEO bulk
169 2 hr Hypoxia Total RNA 0.68 >More info 0.44 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
170 Col-0 ozone 0.61 >More info 0.51 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
171 seedling 1.5h after Gamma WT 0.68 >More info 0.44 >More info seedling day 1 unirradiated WT 1.5h Original data
172 nia1nia2noa1-2 0.67 >More info 0.45 >More info Col-0 whole seedlings Original data GEO bulk
173 AvrRpm1 2 h (leaf) 0.65 >More info 0.46 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
174 root cells stele 140mM NaCl 3 hours 0.56 >More info 0.55 >More info root cells stele standard 1 hour root cells stele Original data
175 Phaseolicola 2 h (leaf) 0.54 >More info 0.57 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
176 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.61 >More info 0.50 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
177 aox1a:rpoTmp untreated 0.60 >More info 0.51 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
178 GST 4 h (leaf) 0.61 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
179 SCR-GR Time 3H Dex 0.63 >More info 0.48 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
180 -Sulfate 24 h 0.47 >More info 0.64 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
181 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.58 >More info 0.52 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
182 ani1 T16 -0.71 >More info -0.39 >More info WT T16 root tissue Original data GEO bulk
183 rao2 H2O2 3h -0.53 >More info -0.57 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
184 Mutant iaa17-6 (IAA) 0.56 >More info 0.54 >More info Col (IAA) Original data GEO bulk
185 Laer Flg22 1h 0.56 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
186 toc1-1-77hr 0.63 >More info 0.46 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
187 8hr-pH4.5 0.52 >More info 0.57 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
188 CT101 ozone 0.59 >More info 0.50 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
189 csn5 (csn5a-2 csn5b) light 0.61 >More info 0.48 >More info WT light Original data GEO bulk
190 Osmotic Stress 24 h (shoot) 0.60 >More info 0.48 >More info Stress mock 24 h (shoot) Original data Stress treatments
191 Rose Bengal 0.5 uM 0.52 >More info 0.56 >More info Control RB and PER Rose Bengal Original data
192 upb1-1 elongation zone -0.60 >More info -0.48 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
193 Col-0 INA 48h 0.62 >More info 0.46 >More info Col-0 MOCK 48h Original data GEO bulk
194 root cells endodermis 140mM NaCl 8 hours 0.55 >More info 0.53 >More info root cells endodermis standard 1 hour root cells endodermis Original data
195 WT-SA 0.54 >More info 0.54 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
196 Te ozone 0.57 >More info 0.51 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
197 BLM+INA 0.62 >More info 0.46 >More info CK BLM and INA seedling Original data
198 UV 0.53 >More info 0.55 >More info WT aerial region Original data GEO bulk
199 nia1nia2 0.59 >More info 0.49 >More info Col-0 whole seedlings Original data GEO bulk
200 toc1-1-81hr 0.64 >More info 0.44 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
201 15m.KCl 0.63 >More info 0.45 >More info To. KCl 14 day old Roots Original data GEO bulk
202 atgsnor1-3-avrB-6h 0.54 >More info 0.53 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
203 miR393 flg22 1h 0.43 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
204 ckh1 CK200 0.45 >More info 0.62 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
205 Laer Flg22+GA 2h 0.57 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
206 root longitudinal zone-4 pH 4.6 0.47 >More info 0.60 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
207 Cor 10h 0.49 >More info 0.58 >More info Mock 10h Cor Original data GEO bulk
208 Col-0 under 4 days salt 0.56 >More info 0.50 >More info Col-0 under control 4 days salt treatment rosette Original data
209 Nicotinamide-61hr 0.61 >More info 0.45 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
210 R. solani AG2-1 0.57 >More info 0.49 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
211 COL-0-Fe--root 0.64 >More info 0.42 >More info COL-0-Ctrl--root root Original data
212 root cells cortex 140mM NaCl 8 hours 0.55 >More info 0.51 >More info root cells cortex standard 1 hour root cells cortex Original data
213 Heat 0.50 >More info 0.56 >More info Control 90 minutes at 38°C. Original data GEO bulk
214 root cells endodermis 140mM NaCl 48 hours 0.60 >More info 0.46 >More info root cells endodermis standard 1 hour root cells endodermis Original data
215 root cells columella root cap -Fe 0.69 >More info 0.37 >More info whole roots standard Original data GEO bulk
216 FHY3p dark+DEX -0.67 >More info -0.39 >More info FHY3p dark+mock Original data GEO bulk
217 Col-0-avrB-6h 0.50 >More info 0.56 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
218 whole roots 140 mM NaCl 1 hour 0.55 >More info 0.50 >More info whole roots standard Original data GEO bulk
219 columella auxin 0.51 >More info 0.54 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
220 root cells cortex 140mM NaCl 1 hour 0.56 >More info 0.49 >More info root cells cortex standard 1 hour root cells cortex Original data
221 root cells epidermis 140mM NaCl 3 hours 0.60 >More info 0.45 >More info root cells epidermis standard 1 hour root cells epidermis Original data
222 WT 30μM phosphate 8 hours. -0.61 >More info -0.44 >More info WT control (not supplemented). Original data
223 atsf1-2 mutant seedling 0.53 >More info 0.52 >More info Col-0 seedling seedlings Original data
224 coi1-16 ein2 sid2 ctrl -0.56 >More info -0.49 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
225 ARR22-ox (t-zeatin 3 h) 0.55 >More info 0.50 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
226 Transgenic LEC2GR Seedling 1h Dex 0.57 >More info 0.47 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
227 pepr1-1 Pepr2-3 +Pep2 10h -0.55 >More info -0.49 >More info WT +Pep2 10h Pep2 Original data GEO bulk
228 root columella root cap 40 mM NaCl 0.67 >More info 0.37 >More info root columella root cap Original data GEO bulk
229 Whole root - low pH 3H 0.52 >More info 0.52 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
230 root hypoxia total 0.72 >More info 0.32 >More info root control total Original data GEO bulk
231 til1-1 22C 0.62 >More info 0.42 >More info Col-0 22C Original data GEO bulk
232 root epidermis and lateral root cap pH4.6 0.59 >More info 0.45 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
233 HopZ1a treated 0.48 >More info 0.56 >More info col Original data GEO bulk
234 npr1-1 SA -0.63 >More info -0.40 >More info Col-0 SA complete seedling Original data
235 Wounding Stress3 h (root) -0.57 >More info -0.46 >More info Stress mock 3 h (root) Original data Stress treatments
236 Cor 24h 0.57 >More info 0.46 >More info Mock 24h Cor Original data GEO bulk
237 root cells epidermis 140mM NaCl 48 hours 0.63 >More info 0.40 >More info root cells epidermis standard 1 hour root cells epidermis Original data
238 +1.6 mM Tween 20 1 h. 0.66 >More info 0.37 >More info +distilled water 1 h. Original data GEO bulk
239 WT chitooctaose 0.49 >More info 0.54 >More info WT water Original data GEO bulk
240 Cold Stress 24 h (root) 0.52 >More info 0.50 >More info Stress mock 24 h (root) Original data Stress treatments
241 Col-0 6h NAA 0.64 >More info 0.38 >More info Col-0 6h MOCK Original data GEO bulk
242 glk1 glk2 GLK1-GR +DEX 24h -0.52 >More info -0.50 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
243 root - 04% oxygen - 2h -0.49 >More info -0.53 >More info root - 21% oxygen - 2h Original data GEO bulk
244 C24-3h IAA 0.47 >More info 0.55 >More info C24-0h IAA whole plant Original data GEO bulk
245 Seedling-HeatStressed TOTALmRNA 0.42 >More info 0.60 >More info Seedling-control TOTALmRNA seedling Original data
246 Elevated CO2 AMPLE N NIGHT 0.53 >More info 0.48 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
247 3m.KCl 0.54 >More info 0.47 >More info To. KCl 14 day old Roots Original data GEO bulk
248 shoots bhlh100/101 0uM Fe 0.68 >More info 0.33 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
249 Mutant siz1-3 (Drought) 0.56 >More info 0.45 >More info Col-0 (Drought) Original data GEO bulk
250 Mutant arf19-1 (IAA) -0.53 >More info -0.48 >More info Col (IAA) Original data GEO bulk
251 FLIGHT TAGESB plate6 ROOTS 0.54 >More info 0.47 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
252 siz1-3 drought 0.56 >More info 0.45 >More info Col-0 drought Original data GEO bulk
253 Col whole leaf 5dpi 0.47 >More info 0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
254 npr1-3 DCA 48h 0.46 >More info 0.55 >More info npr1-3 MOCK 48h Original data GEO bulk
255 Laer Flg22+GA 1h 0.48 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
256 Whole root - S 12H 0.47 >More info 0.54 >More info Whole root - S 0H Original data GEO bulk
257 NaCl cpctry 0.42 >More info 0.59 >More info NaCl Col Original data GEO bulk
258 Imidazolinone EC50 0.51 >More info 0.49 >More info Carrier (Imidazolinone) Original data GEO bulk
259 msh1 albino 0.54 >More info 0.46 >More info WT aerial part Original data GEO bulk
260 Nicotinamide-49hr 0.63 >More info 0.37 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
261 Dex-rga(delta17) 2h GA4+DEX -0.52 >More info -0.48 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
262 Laer Flg22 2h 0.58 >More info 0.42 >More info Laer Control leaf discs Original data GEO bulk
263 amiR-tor induced 6d 0.53 >More info 0.47 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
264 Mutant axr3-1 0.35 >More info 0.65 >More info Col Original data GEO bulk
265 gabaculin 0.47 >More info 0.53 >More info WT Col-0 seedling Original data GEO bulk
266 Whole root - S 48H 0.43 >More info 0.57 >More info Whole root - S 0H Original data GEO bulk
267 Seedling-HeatStressed POLYSOMESmRNA 0.42 >More info 0.58 >More info Seedling-control POLYSOMESmRNA seedling Original data
268 root cells stele 140mM NaCl 8 hours 0.50 >More info 0.49 >More info root cells stele standard 1 hour root cells stele Original data
269 TiO2 germinant -0.57 >More info -0.42 >More info Millipore Water germinant TiO2 seedling Original data
270 sta1 0.57 >More info 0.42 >More info WT Original data GEO bulk
271 35:SUB1C -0.54 >More info -0.45 >More info WT whole seedling Original data GEO bulk
272 cdpk6-yfp 0.59 >More info 0.40 >More info Kan seedlings Original data GEO bulk
273 WT-Dry 0.53 >More info 0.46 >More info WT-CK dehydration treatment 1h Original data
274 root cells endodermis and quiescent center -Fe 0.60 >More info 0.39 >More info whole roots standard Original data GEO bulk
275 LTN008-2 aza-dc 0.54 >More info 0.45 >More info LTN012-2 Mock Original data
276 WT 24H Cold 0.54 >More info 0.45 >More info WT control Original data GEO bulk
277 1h +Pi -0.55 >More info -0.44 >More info 1h -Pi root Original data GEO bulk
278 Osmotic Stress 24 h (root) 0.56 >More info 0.43 >More info Stress mock 24 h (root) Original data Stress treatments
279 siliques AtHb1 control 0.47 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
280 S58-2 0.36 >More info 0.63 >More info wt Original data GEO bulk
281 Col-0 2HS 0.67 >More info 0.31 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
282 phr1 Shoot-Pi 0.61 >More info 0.37 >More info WT Root-Pi shoots Original data GEO bulk
283 line J1551-5 days control + 2 days salt s 0.58 >More info 0.40 >More info line J1551-7 days-control Original data
284 8-DAC chr11-1chr17-1 0.56 >More info 0.42 >More info 8-DAC Col-0 leaf explants Original data
285 roottip hypoxia total 0.69 >More info 0.29 >More info roottip control total Original data GEO bulk
286 col-5 DC3000-avrRpm 4h 0.50 >More info 0.48 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
287 coi1-16 ein2 sid2 ozone 0.57 >More info 0.41 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
288 gul2-1 mutant 0.62 >More info 0.36 >More info WT 7 day-old whole seedlings Original data
289 Col in Pi deficiency medium 0.30 >More info 0.68 >More info Col in control medium root Original data GEO bulk
290 AFB1 flg22 1h 0.40 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
291 hrcC 0.48 >More info 0.50 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
292 IAA 0h -0.43 >More info -0.55 >More info control 0h root Original data GEO bulk
293 Nicotinamide-85hr 0.54 >More info 0.43 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
294 wrky33 Bc inoculation 14h 0.58 >More info 0.39 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
295 anac017-1 H2O2 3h -0.57 >More info -0.40 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
296 Roots Cd -0.73 >More info -0.24 >More info Roots control Cd Root Original data GEO bulk
297 SCR-GR Time 12H Dex 0.67 >More info 0.30 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
298 root cells stele 140mM NaCl 1 hour 0.56 >More info 0.41 >More info root cells stele standard 1 hour root cells stele Original data
299 hrpA 7h 0.50 >More info 0.47 >More info Mock 7h hrpA Original data GEO bulk
300 sfr3 control 0.56 >More info 0.41 >More info WT control All aerial tissue Original data GEO bulk
301 Oxidative Stress 3 h (root) -0.37 >More info -0.60 >More info Stress mock 3 h (root) Original data Stress treatments
302 ANAC102 knock-out low oxygen -0.43 >More info -0.54 >More info Col-0 low oxygen Original data GEO bulk
303 rdr6-15 -0.47 >More info -0.50 >More info Col-0 Original data GEO bulk
304 Whole root - S 24H 0.44 >More info 0.53 >More info Whole root - S 0H Original data GEO bulk
305 efr-1 +elf18 10h -0.45 >More info -0.52 >More info WT +elf18 10h elf18 Original data GEO bulk
306 low CO2 + light 0.54 >More info 0.42 >More info normal CO2 + light Original data GEO bulk
307 OXUPB1-2 meristematic zone 0.52 >More info 0.44 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
308 Nicotinamide-65hr 0.58 >More info 0.38 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
309 mp-B4149 mutant IAA 0.65 >More info 0.31 >More info GR-bdl IAA Original data GEO bulk
310 ABA control 0.59 >More info 0.36 >More info No ABA control Original data GEO bulk
311 seedling 3h after Gamma WT 0.66 >More info 0.29 >More info seedling day 1 unirradiated WT 3h Original data
312 Col-0 C2H4 24h 0.53 >More info 0.42 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
313 Col whole leaf 5 dpi 0.43 >More info 0.52 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
314 ein2-PsmES4326-24hpi -0.42 >More info -0.53 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
315 Whole root - low pH 6H 0.45 >More info 0.50 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
316 epidermis auxin 0.43 >More info 0.52 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
317 NaCl Col 0.55 >More info 0.39 >More info Col Original data GEO bulk
318 cpr5npr1 0.54 >More info 0.40 >More info WT(COL) Original data GEO bulk
319 AtGATA2ox 0.55 >More info 0.39 >More info Col seedling Original data GEO bulk
320 rosette Light Wounded 0.39 >More info 0.55 >More info rosette Light Control Original data GEO bulk
321 Col-0 Root 100 mM ATP 30 min 0.57 >More info 0.37 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
322 cdkf:1-2 0.52 >More info 0.42 >More info wt seedling young seedlings Original data GEO bulk
323 root columella root cap pH4.6 0.50 >More info 0.44 >More info root columella root cap pH5.7 Original data GEO bulk
324 rosette Dark Wounded 0.44 >More info 0.50 >More info rosette Dark Control Original data GEO bulk
325 pmr5 0.41 >More info 0.53 >More info Col-0 Original data GEO bulk
326 ice1 control 0.56 >More info 0.37 >More info WT control Original data GEO bulk
327 Brz220 12 h 0.54 >More info 0.39 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
328 arf2 brz -0.53 >More info -0.40 >More info arf2 mock Original data GEO bulk
329 ahg2-1sid2-2 0.40 >More info 0.53 >More info WT (Col) control Original data GEO bulk
330 anac017-1 AntimycinA 3h -0.38 >More info -0.55 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
331 col-5 hrpA 12h 0.37 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
332 WT NAA 1h 0.58 >More info 0.35 >More info WT 0h Leaf tissue Original data GEO bulk
333 ARR21C-ox 0.64 >More info 0.29 >More info Col-0 Original data ARR21C overexpression
334 iae1 -0.51 >More info -0.42 >More info B179 Original data GEO bulk
335 Laer pretreat GA Flg22 1h 0.22 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
336 root longitudinal zone-4 NaCl 0.43 >More info 0.50 >More info root longitudinal zone-4 Original data GEO bulk
337 Col-0 V. longisporum-inoculated 48 hpi 0.33 >More info 0.60 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
338 KAN1-GR 60min 0.64 >More info 0.28 >More info KAN1-GR 0min Original data GEO bulk
339 24h +Pi -0.54 >More info -0.38 >More info 24h -Pi root Original data GEO bulk
340 Root dark control 24h 0.56 >More info 0.36 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
341 SA 4mM 0.58 >More info 0.34 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
342 ex2 flu dark 8hours/30 minute light 0.32 >More info 0.60 >More info col dark 8hours/30 minute light Original data GEO bulk
343 BLM 0.52 >More info 0.39 >More info CK BLM seedling Original data
344 Mutant arf2-6 (IAA) 0.53 >More info 0.38 >More info Col (IAA) Original data GEO bulk
345 whole roots -Fe 6 hour 0.37 >More info 0.54 >More info whole roots standard Original data GEO bulk
346 Fei-0-3h IAA 0.38 >More info 0.53 >More info Fei-0-0h IAA whole plant Original data GEO bulk
347 col-5 DC3000 12h 0.38 >More info 0.53 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
348 vte2-1 3d vernalization 0.59 >More info 0.32 >More info WT 3d vernalization Original data GEO bulk
349 UV Stress 24 h (shoot) 0.58 >More info 0.33 >More info Stress mock 24 h (shoot) Original data Stress treatments
350 penta Alternaria 3dpi 0.59 >More info 0.32 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
351 4d red light grown hmr-5 seedlings 0.57 >More info 0.34 >More info 4d red light grown WT(Col-0) seedlings Original data
352 cat2-short-day 4d 0.32 >More info 0.59 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
353 Laer pretreat GA+JA Flg22 0h 0.54 >More info 0.36 >More info Laer pretreat water control leaf discs Original data GEO bulk
354 sni1 0.51 >More info 0.39 >More info WT Original data GEO bulk
355 root cells epidermis and lateral root cap -Fe 0.62 >More info 0.28 >More info whole roots standard Original data GEO bulk
356 S14-150 0.36 >More info 0.54 >More info wt Original data GEO bulk
357 NAA 6h 0.57 >More info 0.33 >More info before treatment NAA root Original data GEO bulk
358 protoplasted roots pH4.6 0.60 >More info 0.30 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
359 Nicotinamide-73hr 0.58 >More info 0.32 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
360 root longitudinal zone-3 pH 4.6 0.33 >More info 0.57 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
361 Col-0 SA 0.55 >More info 0.34 >More info Col-0 water complete seedling Original data
362 Brz220 3 h 0.50 >More info 0.39 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
363 root cells epidermis 140mM NaCl 8 hours 0.50 >More info 0.39 >More info root cells epidermis standard 1 hour root cells epidermis Original data
364 csn3-1 light 0.50 >More info 0.39 >More info WT light Original data GEO bulk
365 cpr5scv1 0.50 >More info 0.39 >More info WT(COL) Original data GEO bulk
366 root cells epidermis 140mM NaCl 20 hours 0.58 >More info 0.31 >More info root cells epidermis standard 1 hour root cells epidermis Original data
367 Uniconazole 3 h 0.33 >More info 0.55 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
368 Leafminer damaged seedlings 0.32 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
369 KAN1-GR 30min 0.62 >More info 0.26 >More info KAN1-GR 0min Original data GEO bulk
370 ANOXIA -0.26 >More info -0.62 >More info ANOXIA+SUCROSE Original data GEO bulk
371 dark-hs 0.29 >More info 0.59 >More info dark-control seedling Original data
372 amiR-tor induced 3d 0.53 >More info 0.34 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
373 ice1 6H Cold 0.52 >More info 0.35 >More info WT 6H Cold Original data GEO bulk
374 Lipopolysaccaride4 h (leaf) 0.62 >More info 0.25 >More info Mock 4 h (leaf) Original data Elicitor treatments
375 phyABDE Dark 0.57 >More info 0.30 >More info WT Dark Dark whole seedling Original data GEO bulk
376 rgs1+no sugars -0.30 >More info -0.57 >More info WT+no sugars rosette leaves Original data GEO bulk
377 WT +elf18 2h 0.33 >More info 0.53 >More info WT untreated elf18 Original data GEO bulk
378 2 hr Hypoxia IP RNA 0.62 >More info 0.24 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
379 phyABCDE Dark 0.60 >More info 0.26 >More info WT Dark Dark whole seedling Original data GEO bulk
380 Col-0 wt Hypoxic 0.69 >More info 0.17 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
381 WT 90-105 min Xanthomonas 0.36 >More info 0.50 >More info WT T0 Original data GEO bulk
382 Dark 40min pls UV-AB 5min 0.57 >More info 0.29 >More info Dark 45 min Original data Light treatments
383 Root dark control 7h 0.54 >More info 0.31 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
384 tor mutant 0.51 >More info 0.34 >More info WT (Col) none seedlings Original data GEO bulk
385 Blue Light 45 min -0.29 >More info -0.56 >More info White Light 45min Original data Light treatments
386 shoot-10 μM DEX- 3 hr 0.60 >More info 0.25 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
387 WT-16ºC -0.61 >More info -0.24 >More info WT-23ºC Original data GEO bulk
388 TAMM27 roots 2hr KNO3 nitrogen 0.58 >More info 0.27 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
389 HARAP aerobic -0.24 >More info -0.61 >More info WT aerobic aerobic Original data GEO bulk
390 Dark 4 h pls UV-AB 5min 0.51 >More info 0.33 >More info Dark 4 h Original data Light treatments
391 Paclobutrazol 3 h 0.05 >More info 0.79 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
392 Bur-0-3h IAA 0.28 >More info 0.56 >More info Bur-0h IAA whole plant Original data GEO bulk
393 root protophloem 40 mM NaCl 0.55 >More info 0.28 >More info root protophloem Original data GEO bulk
394 ceh1 mutant 0.50 >More info 0.33 >More info Parent line Original data
395 root endodermis and quiescent center pH4.6 0.33 >More info 0.50 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
396 spch 0.57 >More info 0.26 >More info Col-0 WT whole seedling Original data GEO bulk
397 WT+chitooctaose 0.17 >More info 0.65 >More info WT+water chitooctaose seedlings Original data GEO bulk
398 Whole root - S 72H 0.32 >More info 0.50 >More info Whole root - S 0H Original data GEO bulk
399 Col BTH 0.15 >More info 0.67 >More info Col rosettes Original data GEO bulk
400 IAA 3 h 0.23 >More info 0.59 >More info Mock 3 h Original data Basic hormone treatment of seedlings
401 abh1 -ABA 0.25 >More info 0.57 >More info Col-0 -ABA Original data GEO bulk
402 QK HS 0.50 >More info 0.31 >More info QK control heat shocked seedling Original data GEO bulk
403 root cells stele -Fe 0.60 >More info 0.21 >More info whole roots standard Original data GEO bulk
404 2hr continuous KNO3 PeR cell -0.53 >More info -0.27 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
405 GR-REV 60min 0.52 >More info 0.28 >More info Col 60min Original data GEO bulk
406 root cells -Fe 0.58 >More info 0.22 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
407 shoot-10 μM DEX- 6 hr 0.56 >More info 0.23 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
408 WT (Ler) CK25 0.22 >More info 0.57 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
409 ARF10 -0.51 >More info -0.27 >More info Col-0 Original data GEO bulk
410 Nicotinamide-69hr 0.53 >More info 0.25 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
411 coi1-2 JA 0.50 >More info 0.28 >More info JA Whole seedling Original data GEO bulk
412 C58 3hpi 0.25 >More info 0.53 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
413 gpa1-4/agb1-2 ozone 2d -0.24 >More info -0.54 >More info Col ozone 2d ozone Original data GEO bulk
414 Kas2 roots 2hr KNO3 nitrogen 0.27 >More info 0.51 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
415 root cells cortex -Fe 0.51 >More info 0.26 >More info whole roots standard Original data GEO bulk
416 root cells epidermis 140mM NaCl 1 hour 0.52 >More info 0.25 >More info root cells epidermis standard 1 hour root cells epidermis Original data
417 SA Treated 0.69 >More info 0.08 >More info Water Original data GEO bulk
418 Ws 100mM NaCl 0.53 >More info 0.23 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
419 Ws leaf 100mM NaCl 0.53 >More info 0.23 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
420 noa1-2 0.57 >More info 0.19 >More info Col-0 whole seedlings Original data GEO bulk
421 Daminozide 3 h -0.03 >More info 0.79 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
422 arr-dmso-sample 0.58 >More info 0.17 >More info Wt-dmso-sample seedling Original data
423 E2Fa-Dpa 0.51 >More info 0.24 >More info WT Original data GEO bulk
424 rrd1 IBA -0.54 >More info -0.21 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
425 Nicotinamide-89hr 0.51 >More info 0.24 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
426 Prohexadione 3 h 0.19 >More info 0.56 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
427 flu dark 8hours/30 minute light 0.19 >More info 0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
428 msh1 stunt 0.50 >More info 0.24 >More info WT Col-0 above ground part of plant Original data GEO bulk
429 WT roots - Fe 0.60 >More info 0.14 >More info WT roots + Fe Roots Original data GEO bulk
430 Bur-0-1h IAA 0.23 >More info 0.51 >More info Bur-0h IAA whole plant Original data GEO bulk
431 OXUPB1-2 elongation zone 0.24 >More info 0.50 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
432 A. halleri highZn-root -0.22 >More info -0.52 >More info A. petraea highZn-root Original data GEO bulk
433 SCR-GR Time 1H Dex 0.56 >More info 0.17 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
434 KCl germinant -0.54 >More info -0.19 >More info Millipore Water germinant KCl seedling Original data
435 Col-0 SA 0.54 >More info 0.19 >More info Col-0 Original data GEO bulk
436 bHLH122 ox -0.20 >More info -0.53 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
437 10min Reillumination Total RNA -0.56 >More info -0.16 >More info 1h Dark Total RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
438 Nicotinamide-93hr 0.53 >More info 0.19 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
439 AFB1 0h 0.54 >More info 0.18 >More info WT 0h Leaf tissue Original data GEO bulk
440 Fei-0-1h IAA 0.22 >More info 0.50 >More info Fei-0-0h IAA whole plant Original data GEO bulk
441 desiccated mature pollen grains -0.22 >More info -0.50 >More info hydrated pollen grains Original data GEO bulk
442 roots bhlh100/101 0uM Fe 0.56 >More info 0.15 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
443 toc1-1-61hr 0.61 >More info 0.10 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
444 miR393 flg22 2h 0.19 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
445 essp4/sdg8-5 mutant 0.51 >More info 0.19 >More info wild type leaf Original data GEO bulk
446 L2.5 mutant -0.72 >More info 0.03 >More info Wt Original data GEO bulk
447 atmyc2 cop1 Seedling Dark 0.54 >More info 0.14 >More info WT Seedling Dark Original data GEO bulk
448 Mutant iaa5_6_19(IAA) 0.55 >More info 0.13 >More info Col (IAA) Original data GEO bulk
449 ein3 eil1 0.63 >More info 0.05 >More info Col-0 mock Whole seedling Original data GEO bulk
450 arp6-10 24h at 27 ºC 0.52 >More info 0.16 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
451 downy mildew cotyledons late stage 0.52 >More info 0.16 >More info mock inoculated Cotyledons Original data GEO bulk
452 Shoot apex inflorescence (after bolting) 0.03 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
453 2xX6x interploidy cross 0.17 >More info 0.51 >More info 2xX2x cross Original data GEO bulk
454 CLO 4mM 0.62 >More info 0.06 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
455 Dex-rga(delta17) 4h GA4 -0.50 >More info -0.18 >More info Vector 4h GA4 shoots Original data GEO bulk
456 WT drought 0.15 >More info 0.52 >More info WT control All aerial tissue Original data GEO bulk
457 shoots WT 0uM Fe 0.62 >More info 0.04 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
458 shoot-10 μM DEX- 12 hr 0.51 >More info 0.15 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
459 long 17-degree- 0.02 >More info 0.63 >More info control long Original data GEO bulk
460 35S:RPS4 eds1-2 T0 0.14 >More info 0.51 >More info 35S:RPS4 T0 leaves Original data
461 -Sulfate 2 h 0.51 >More info 0.13 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
462 2hr transitory KNO3 PrR cell 0.56 >More info 0.08 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
463 CCA1-ox 6am non-polysomal 0.13 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
464 Red/FR Light45min -0.09 >More info 0.72 >More info FarRed Light 45min Original data Light treatments
465 ANAC102 over-expressor 0.13 >More info 0.50 >More info C24 Original data GEO bulk
466 seed germinating in countinuous light 24h SL -0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
467 ERF115OE roottip5days -0.56 >More info -0.06 >More info Col-0 roottip5days root tips Original data
468 HSP90 Reduced RNAi-B1 0.52 >More info 0.10 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
469 dorn1-1 Root 100 mM ATP 30 min -0.04 >More info -0.58 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
470 rcf1-1 cold 0h 0.54 >More info 0.07 >More info WT cold 0h Control seedlings Original data GEO bulk
471 miR 0h 0.50 >More info 0.11 >More info Col 0h Leaf Original data GEO bulk
472 npr1-3 MOCK 48h -0.04 >More info -0.56 >More info Col-0 MOCK 48h Original data GEO bulk
473 Col-0 24hpi A. brassicicola 0.58 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
474 ACC 3 h 0.02 >More info 0.58 >More info Mock 3 h Original data Basic hormone treatment of seedlings
475 erf104-ko H2O 4h 0.51 >More info 0.08 >More info Col-0 H2O 4h Original data GEO bulk
476 HairpinZ 4 h (leaf) 0.61 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
477 SIV pollen tube 0.50 >More info 0.08 >More info drypollen Semi in vivo-grown pollen tubes Original data GEO bulk
478 35S::ERF104 H2O 4h 0.54 >More info 0.03 >More info Col-0 H2O 4h Original data GEO bulk
479 PRR5-VP 6h light on 0.55 >More info 0.02 >More info WT 6h light on whole plant Original data GEO bulk
480 sng1 UV 0.54 >More info 0.02 >More info UV aerial region Original data GEO bulk
481 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.62 >More info -0.06 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
482 bri1-116 -0.18 >More info 0.73 >More info Col seedling Original data GEO bulk
483 IRP1-OE-Fe--root -0.50 >More info -0.04 >More info COL-0-Fe--root root Original data
484 rao1-2 0.50 >More info 0.03 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
485 BAM7-Lig Ox untreated 0.02 >More info 0.50 >More info WT untreated none shoot Original data
486 IAA7mII over-expressor IAA Treated -0.17 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
487 pip3 At2g19270 TDNA 9 0.53 >More info -0.02 >More info Col-0 whole plant Original data GEO bulk
488 Ba1 UV 0.51 >More info -0.01 >More info Ba1 mock UV seedling Original data
489 siliques AtHb1 hypoxia 0.50 >More info -0.01 >More info siliques WT hypoxia hypoxia silique Original data GEO bulk
490 2hr transitory KNO3 PeR cell -0.51 >More info 0.03 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
491 eds16 whole leaf 7d UI 0.03 >More info -0.50 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
492 Col PSTDC3000 24h 0.59 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
493 ahg3-1 0.64 >More info -0.22 >More info ABA control Original data GEO bulk
494 PNO8 12 h 0.53 >More info -0.11 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
495 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.53 >More info -0.13 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
496 FarRed Light 45min 0.16 >More info -0.51 >More info White Light 45min Original data Light treatments
497 elf3-7-23ºC -0.54 >More info 0.20 >More info WT-23ºC Original data GEO bulk
498 pif4pif5 mut 24h FR 0.52 >More info -0.19 >More info WT 24h FR Original data GEO bulk
499 mpk6-ko H2O 4h 0.59 >More info -0.26 >More info Col-0 H2O 4h Original data GEO bulk
500 LEAFY-GR DEX 0.50 >More info -0.17 >More info Mock Dexamethasone seedlings Original data GEO bulk
501 OxPHR1 -Pi-DEX-CHX -0.51 >More info 0.19 >More info phr1 -Pi-DEX-CHX Original data GEO bulk
502 ein2 1% sucrose 14-day-old 0.52 >More info -0.25 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk