4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on MPK6 ox Shoot Hypoxia
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List of experiments correlated with "MPK6 ox Shoot Hypoxia"  Help Download transcriptome of top 30
Score Experiment Correlation from
MPK6 ox Shoot Hypoxia		 Correlation to
MPK6 ox Shoot Hypoxia		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 MPK6 ox Shoot Hypoxia 1.00 >More info 1.00 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
2 MPK6 ox Root Hypoxia 0.94 >More info 0.90 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
3 WT Shoot Hypoxia 0.85 >More info 0.94 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
4 shoot hypoxia total 0.85 >More info 0.87 >More info shoot control total Original data GEO bulk
5 Col-0 2HS 0.83 >More info 0.86 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
6 WT Root Hypoxia 0.83 >More info 0.81 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
7 mdh -0.90 >More info -0.73 >More info Col Original data GEO bulk
8 Col-0 wt Hypoxic 0.81 >More info 0.81 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
9 Ws seedlings -0.91 >More info -0.70 >More info ged1 seedlings Original data GEO bulk
10 ged1 seedlings 0.91 >More info 0.70 >More info Ws seedlings Original data GEO bulk
11 roottip hypoxia total 0.84 >More info 0.75 >More info roottip control total Original data GEO bulk
12 Aerobic prt6 0.81 >More info 0.77 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
13 root hypoxia total 0.85 >More info 0.72 >More info root control total Original data GEO bulk
14 root - 08% oxygen - 2h 0.74 >More info 0.82 >More info root - 21% oxygen - 2h Original data GEO bulk
15 9 hr Hypoxia IP RNA 0.81 >More info 0.75 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
16 2 hr Hypoxia Total RNA 0.77 >More info 0.79 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
17 9 hr Hypoxia Total RNA 0.84 >More info 0.71 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
18 root - 04% oxygen - 2h 0.72 >More info 0.83 >More info root - 21% oxygen - 2h Original data GEO bulk
19 root - 01% oxygen - 2h 0.67 >More info 0.86 >More info root - 21% oxygen - 2h Original data GEO bulk
20 9 hr Hypoxia 1 hr recovery IP RNA 0.86 >More info 0.65 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
21 2 hr Hypoxia IP RNA 0.73 >More info 0.76 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
22 Mutant cry1 -0.91 >More info -0.58 >More info Col-0 Original data GEO bulk
23 cry1 low light -0.91 >More info -0.58 >More info Col-O low light Original data GEO bulk
24 Aerobic e1 ate2 0.81 >More info 0.67 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
25 root - 04% oxygen - 30min 0.71 >More info 0.76 >More info root - 21% oxygen - 30min Original data GEO bulk
26 9 hr Hypoxia 1 hr recovery Total RNA 0.86 >More info 0.60 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
27 root - 08% oxygen - 30min 0.68 >More info 0.77 >More info root - 21% oxygen - 30min Original data GEO bulk
28 pab polysome -0.74 >More info -0.70 >More info WT polysome seedling shoot/aerial seedling Original data
29 sav3-2 shade 0.69 >More info 0.74 >More info Col-0 shade seedlings Original data GEO bulk
30 Mutant sav3-2 (SH) 0.69 >More info 0.74 >More info Col-0 (SH) Original data GEO bulk
31 root - 01% oxygen - 30min 0.71 >More info 0.69 >More info root - 21% oxygen - 30min Original data GEO bulk
32 Col-0 low oxygen 0.78 >More info 0.61 >More info Col-0 control low oxygen root Original data GEO bulk
33 hsfa1 quadruple mutant heat shock -0.81 >More info -0.56 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
34 ABA control -0.62 >More info -0.74 >More info No ABA control Original data GEO bulk
35 sav3-2 light 0.60 >More info 0.71 >More info Col-0 light seedlings Original data GEO bulk
36 root - 04% oxygen - 48h 0.63 >More info 0.68 >More info root - 21% oxygen - 48h Original data GEO bulk
37 Mutant sav3-2 (WL) 0.60 >More info 0.71 >More info Col-0 (WL) Original data GEO bulk
38 Anoxia 0.56 >More info 0.72 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
39 35S:PCO1 hypoxia -0.72 >More info -0.56 >More info WT hypoxia whole rosette Original data
40 ahg1-1 -0.66 >More info -0.61 >More info ABA control Original data GEO bulk
41 Col upon hypoxia 6 hrs 0.79 >More info 0.48 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
42 GA4 3 h (ga1 seed) -0.75 >More info -0.51 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
43 gun5 control 0.82 >More info 0.43 >More info Col-0 control Original data GEO bulk
44 estradiol induced LEC1 -0.71 >More info -0.53 >More info control Original data GEO bulk
45 Estradiol4 days -0.71 >More info -0.53 >More info Col Original data GEO bulk
46 hypoxic 0.71 >More info 0.52 >More info WT aerobic hypoxia Original data GEO bulk
47 CeO2 germinant -0.67 >More info -0.56 >More info Millipore Water germinant CeO2 seedling Original data
48 phyABCDE Dark -0.66 >More info -0.55 >More info WT Dark Dark whole seedling Original data GEO bulk
49 Light 0.65 >More info 0.56 >More info Control Original data GEO bulk
50 Mutant arf2-6 -0.67 >More info -0.54 >More info Col Original data GEO bulk
51 piffq 2d WL -0.58 >More info -0.63 >More info WT 2d WL whole seedling Original data GEO bulk
52 gun1-9 control 0.79 >More info 0.42 >More info Col-0 control Original data GEO bulk
53 rsa1 salt 12 h -0.64 >More info -0.56 >More info WT salt 12 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
54 shoot control pGL2 0.80 >More info 0.40 >More info shoot control total Original data GEO bulk
55 OE-HRA1 2HS  -0.78 >More info -0.42 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
56 Stem tissue 5 days NAA 0.73 >More info 0.47 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
57 ACN1-2 0.61 >More info 0.59 >More info col-7 Original data GEO bulk
58 TA induced 0.75 >More info 0.45 >More info Methanol TA Suspension cells Original data GEO bulk
59 20m.KCl -0.62 >More info -0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
60 P.p 2.5hai 0.73 >More info 0.46 >More info At-Control roots Original data GEO bulk
61 shoot-10 μM DEX- 12 hr 0.65 >More info 0.54 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
62 clf-28 swn-7 -0.65 >More info -0.53 >More info Col whole plant Original data GEO bulk
63 seedlings-week-old RECA1-overexpressing
transgenic		 0.56 >More info 0.62 >More info seedlings-week-old Col-0 seedlings Original data
64 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.75 >More info 0.42 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
65 P.p 6hai 0.68 >More info 0.48 >More info At-Control roots Original data GEO bulk
66 pab nonpolysome -0.67 >More info -0.48 >More info WT nonpolysome seedling shoot/aerial seedling Original data
67 phyABDE Dark -0.59 >More info -0.55 >More info WT Dark Dark whole seedling Original data GEO bulk
68 Seedling KUA1-IOX est 0.59 >More info 0.55 >More info Seedling KUA1-IOX mock Original data
69 Mature callus 0.51 >More info 0.63 >More info Young callus hypocotyls Original data GEO bulk
70 TNT-seedlings 0.62 >More info 0.52 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
71 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.75 >More info 0.39 >More info 2d dark-grown WT seedling Original data GEO bulk
72 root - 01% oxygen - 48h 0.69 >More info 0.45 >More info root - 21% oxygen - 48h Original data GEO bulk
73 1.5 hr ammonium 0.73 >More info 0.41 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
74 dark +H2O2 -0.72 >More info -0.41 >More info dark 5 mM H2O2 seedling Original data GEO bulk
75 P.p 10.5hai 0.60 >More info 0.53 >More info At-Control roots Original data GEO bulk
76 sav1-1 light 0.62 >More info 0.51 >More info Col-0 light seedlings Original data GEO bulk
77 A2hsfa1-ox in quadruple mutant heat shock 0.73 >More info 0.40 >More info hsfa1 quadruple mutant heat shock whole seedling Original data GEO bulk
78 oas-a1.1 Cd 18h 0.61 >More info 0.51 >More info Cd 18h root Root Original data GEO bulk
79 SIZ 0.61 >More info 0.51 >More info COL seedling Original data
80 Col-0 low oxygen 0.70 >More info 0.42 >More info Col-0 Original data GEO bulk
81 gabaculin 0.70 >More info 0.42 >More info WT Col-0 seedling Original data GEO bulk
82 sav1-1 shade 0.71 >More info 0.41 >More info Col-0 shade seedlings Original data GEO bulk
83 FarRed Light 45min -0.41 >More info -0.71 >More info White Light 45min Original data Light treatments
84 IAA/inhibitor A Treated 0.59 >More info 0.52 >More info IAA Treated Original data GEO bulk
85 gul2-1 mutant -0.72 >More info -0.39 >More info WT 7 day-old whole seedlings Original data
86 shoot-10 μM DEX- 24hr 0.48 >More info 0.63 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
87 IRP1-OE-Fe--shoot 0.56 >More info 0.54 >More info COL-0-Fe--shoot shoot Original data
88 DFPM 0.54 >More info 0.56 >More info control Original data GEO bulk
89 Propiconazole 3 h 0.55 >More info 0.55 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
90 Shoot apex inflorescence (after bolting) 0.45 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
91 root callus inducing medium 24h -0.66 >More info -0.43 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
92 pif3 Dark 1h 0.73 >More info 0.36 >More info WT Dark 1h etiolated seedling Original data GEO bulk
93 ALC Toc1 light-light Mock -0.74 >More info -0.35 >More info Col light-light Mock no ethanol Original data GEO bulk
94 SCR-GR Time 12H Dex 0.62 >More info 0.47 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
95 hsfa1 quadruple mutant -0.72 >More info -0.37 >More info WT (Col-0) whole seedling Original data GEO bulk
96 pepr1-1 Pepr2-3 untreated 0.59 >More info 0.50 >More info WT untreated untreated Original data GEO bulk
97 bri1-116 0.36 >More info 0.73 >More info Col seedling Original data GEO bulk
98 WT seedlings MV 0.53 >More info 0.55 >More info WT seedlings control Seedlings Original data GEO bulk
99 fri-flc -0.61 >More info -0.47 >More info WT Original data GEO bulk
100 root - 08% oxygen - 48h 0.46 >More info 0.62 >More info root - 21% oxygen - 48h Original data GEO bulk
101 shoot control pRBCS 0.76 >More info 0.31 >More info shoot control total Original data GEO bulk
102 estradiole-induced ANAC059 -0.65 >More info -0.42 >More info transgenic (empty vector inducible system) Original data GEO bulk
103 mbd6 mutant thaliana 10-day-old seedling 0.72 >More info 0.35 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
104 root callus inducing medium 12 h -0.68 >More info -0.38 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
105 shoot control pKAT1 0.70 >More info 0.36 >More info shoot control total Original data GEO bulk
106 wavy 0.57 >More info 0.49 >More info WT Original data GEO bulk
107 empty vector IAA Treated -0.56 >More info -0.50 >More info empty vector mock Original data GEO bulk
108 root cap pGL2 8h BL -0.68 >More info -0.38 >More info root cap pGL2 0h BL brassinosteroid root Original data
109 Tsu -Fe 24h Roots 0.71 >More info 0.34 >More info Tsu +Fe 24h Roots Original data GEO bulk
110 R. solani AG8 0.63 >More info 0.42 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
111 Tsu-1 -Fe 24h 0.71 >More info 0.34 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
112 npr1-1 SA -0.53 >More info -0.51 >More info Col-0 SA complete seedling Original data
113 WT Red light 18h 0.68 >More info 0.36 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
114 coi1-16 ein2 sid2 ctrl -0.59 >More info -0.45 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
115 root callus inducing medium 48 h -0.63 >More info -0.41 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
116 cngc19 0.65 >More info 0.39 >More info Col-0 root Original data GEO bulk
117 RRE2 Chitin 0.60 >More info 0.43 >More info Chitin Original data GEO bulk
118 Imbibed 24 h ABA 30uM (seed) -0.69 >More info -0.34 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
119 gul2-1 bri1-5 mutant -0.70 >More info -0.33 >More info WT 7 day-old whole seedlings Original data
120 pvip1 pvip2 0.51 >More info 0.52 >More info Col-0 whole rosettes Original data GEO bulk
121 Col-0 (t-zeatin 3 h) -0.58 >More info -0.45 >More info Col-0 Original data Cytokinin treatment of seedlings
122 edr1 18 h powdery mildew 0.46 >More info 0.57 >More info Col-0 18 h powdery mildew Original data GEO bulk
123 shoot control pSultr2:2 0.71 >More info 0.31 >More info shoot control total Original data GEO bulk
124 Mutant arf2-6 (IAA) -0.67 >More info -0.35 >More info Col (IAA) Original data GEO bulk
125 etiolated atbzip16 -0.65 >More info -0.37 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
126 rsa3-1 Na 24h 0.47 >More info 0.55 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
127 RRE1 Chitin 0.65 >More info 0.35 >More info Chitin Original data GEO bulk
128 Cs root -0.57 >More info -0.43 >More info control root Original data GEO bulk
129 GST 4 h (leaf) 0.42 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
130 Bay-0-1h IAA -0.44 >More info -0.56 >More info Bay-0-0h IAA whole plant Original data GEO bulk
131 ABI3GR +DEX +CHX -0.48 >More info -0.52 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
132 cngc1 -0.62 >More info -0.37 >More info Ws-2 Seedlings Original data GEO bulk
133 estradiole-induced ANAC092 -0.66 >More info -0.33 >More info transgenic (empty vector inducible system) Original data GEO bulk
134 cngc1-3 0.61 >More info 0.38 >More info Col-0 root Original data GEO bulk
135 shoot-10 μM DEX- 6 hr 0.52 >More info 0.47 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
136 bHLH122 ox -0.44 >More info -0.55 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
137 Shoot -Cs 0.22 >More info 0.77 >More info Control-shoot Original data GEO bulk
138 pab total -0.75 >More info -0.23 >More info WT total seedling shoot/aerial seedling Original data
139 frb1 mutant -0.61 >More info -0.37 >More info WT whole seedling Original data GEO bulk
140 Fei-0-30min IAA -0.58 >More info -0.39 >More info Fei-0-0h IAA whole plant Original data GEO bulk
141 root callus inducing medium 96 h -0.54 >More info -0.43 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
142 AAF-OX 0.45 >More info 0.52 >More info Col-0 Rosette leaf Original data GEO bulk
143 Col BTH 0.30 >More info 0.67 >More info Col rosettes Original data GEO bulk
144 Rose Bengal 0.5 uM 0.32 >More info 0.65 >More info Control RB and PER Rose Bengal Original data
145 Genotoxic Stress 3 h (root) -0.58 >More info -0.38 >More info Stress mock 3 h (root) Original data Stress treatments
146 Hypoxic prt6 0.59 >More info 0.37 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
147 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.53 >More info 0.43 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
148 ani1 T16 -0.66 >More info -0.30 >More info WT T16 root tissue Original data GEO bulk
149 pif3 Dark 0h 0.53 >More info 0.43 >More info WT Dark 0h etiolated seedling Original data GEO bulk
150 Col0 roots 2hr KNO3 nitrogen -0.61 >More info -0.35 >More info Col0 roots 2hr KCl control root Original data GEO bulk
151 Hypoxic e1 ate 0.62 >More info 0.34 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
152 flu 0.33 >More info 0.63 >More info WT Col Original data GEO bulk
153 shoot hypoxia pGL2 0.80 >More info 0.15 >More info shoot hypoxia total Original data GEO bulk
154 CCA14 dark late -0.50 >More info -0.45 >More info Col dark late Original data GEO bulk
155 tumour 0.70 >More info 0.25 >More info non-tumor tumour Original data GEO bulk
156 amiRAP hypoxic -0.60 >More info -0.35 >More info hypoxic hypoxia Original data GEO bulk
157 IRP1-OE-Ctrl--shoot 0.66 >More info 0.29 >More info COL-0-Ctrl--shoot shoot Original data
158 seedlings protease IV 0.43 >More info 0.52 >More info seedlings nontreated control whole seedling Original data
159 hy5 low light -0.77 >More info -0.17 >More info Col-O low light Original data GEO bulk
160 Mutant hy5 -0.77 >More info -0.17 >More info Col-0 Original data GEO bulk
161 Sha-1h IAA -0.54 >More info -0.40 >More info Sha-0h IAA whole plant Original data GEO bulk
162 mbd4 mutant thaliana 10-day-old seedling 0.63 >More info 0.30 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
163 GV3101 6dpi 0.61 >More info 0.32 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
164 CMP 4hr 0.30 >More info 0.63 >More info Acetone 4hr root Original data GEO bulk
165 max4 hypocotyl 0.56 >More info 0.36 >More info wt hypocotyl hypocotyl Original data GEO bulk
166 Cambium 5 days NAA 0.56 >More info 0.36 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
167 Heat shock optimum 0.27 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
168 total mRNA eif3k 0.50 >More info 0.42 >More info total mRNA WT aerial part Original data GEO bulk
169 WT 3h -P 0.41 >More info 0.51 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
170 pmr5 0.30 >More info 0.62 >More info Col-0 Original data GEO bulk
171 WT Seedling BL+ABA -0.66 >More info -0.25 >More info WT Seedling BL Original data GEO bulk
172 shoot hypoxia pCER5 0.77 >More info 0.14 >More info shoot hypoxia total Original data GEO bulk
173 P.syringae AvrRpt2 4 h (leaf) 0.39 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
174 Laer pretreat GA+JA Flg22 0h 0.60 >More info 0.31 >More info Laer pretreat water control leaf discs Original data GEO bulk
175 gai Control 0.58 >More info 0.33 >More info Laer Control leaf discs Original data GEO bulk
176 CT101 ozone 0.51 >More info 0.39 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
177 msh1 albino 0.54 >More info 0.36 >More info WT aerial part Original data GEO bulk
178 250uM K-nitrate 20min roots -0.67 >More info -0.23 >More info 250uM KCl 20min roots Roots Original data GEO bulk
179 JA 0.55 >More info 0.35 >More info Col-0 mock Whole seedling Original data GEO bulk
180 IMI 4mM 0.25 >More info 0.65 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
181 ceh1 mutant 0.36 >More info 0.54 >More info Parent line Original data
182 Ba1 UV 0.59 >More info 0.31 >More info Ba1 mock UV seedling Original data
183 35S::Zat12+H2O2 -0.60 >More info -0.30 >More info WT+H2O2 H2O2 Original data GEO bulk
184 ARR22-ox (t-zeatin 3 h) 0.59 >More info 0.31 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
185 elf3-7-23ºC 0.33 >More info 0.57 >More info WT-23ºC Original data GEO bulk
186 ACN1-2 Sucrose 0.30 >More info 0.60 >More info Col-7 Sucrose Original data GEO bulk
187 Root submergence 24h 0.62 >More info 0.27 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
188 35S-MIF1 light grown -0.53 >More info -0.36 >More info Light-grown WT control Original data GEO bulk
189 35S::Zat12 -0.65 >More info -0.24 >More info WT Original data GEO bulk
190 ubc13A-es -0.67 >More info -0.22 >More info Col-es root Original data GEO bulk
191 rosette Dark Wounded 0.37 >More info 0.52 >More info rosette Dark Control Original data GEO bulk
192 SAB 0.38 >More info 0.51 >More info COL seedling Original data
193 eif3h -0.71 >More info -0.18 >More info WT Original data GEO bulk
194 GST NPP1 4 h (leaf) 0.29 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
195 A. thaliana-A. lyrata hybrid -0.32 >More info -0.57 >More info A. thaliana mature leaves before flowering Original data GEO bulk
196 gir flower 33d 0.51 >More info 0.37 >More info Col-7 flower 33d flower Original data GEO bulk
197 PIF5ox high R/FR -0.53 >More info -0.35 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
198 C24 24h cold -0.59 >More info -0.29 >More info Col 24h cold leaf Original data GEO bulk
199 A2hsfa1-ox in quadruple mutant 0.54 >More info 0.33 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
200 PRR5-VP 12h light on -0.68 >More info -0.19 >More info WT 12h light on whole plant Original data GEO bulk
201 Heat and anoxia 0.31 >More info 0.56 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
202 hrpA fliC 7h 0.20 >More info 0.67 >More info Mock 7h hrpA fliC Original data GEO bulk
203 35S::ZAT12 -0.75 >More info -0.12 >More info gl1 Original data GEO bulk
204 eto1-4 -0.62 >More info -0.25 >More info Col-0 whole seedling Original data GEO bulk
205 eto1-4 +370 0.68 >More info 0.18 >More info eto1-4 whole seedling Original data GEO bulk
206 UV Stress 24 h (shoot) 0.33 >More info 0.53 >More info Stress mock 24 h (shoot) Original data Stress treatments
207 Mutant axr3-1 0.55 >More info 0.30 >More info Col Original data GEO bulk
208 Lipopolysaccaride4 h (leaf) 0.32 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
209 WT Col-0 Bgh inoculated 0.31 >More info 0.54 >More info WT Col-0 Un-inoculated Original data GEO bulk
210 Elevated CO2 AMPLE N NIGHT 0.32 >More info 0.53 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
211 rcf1-1 cold 12h 0.59 >More info 0.26 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
212 P35S:rGRF3 0.57 >More info 0.28 >More info WS Original data GEO bulk
213 piffq FR 24h -0.35 >More info -0.50 >More info WT FR 24h whole seedling Original data GEO bulk
214 Col ozone 3h 0.12 >More info 0.73 >More info Col clean-air 3h ozone Original data GEO bulk
215 S15-118 0.25 >More info 0.60 >More info wt Original data GEO bulk
216 GR:KAN1 DEX Shade 0.50 >More info 0.34 >More info GR:KAN1 Mock Shade seedlings Original data
217 ein3 eil1 0.50 >More info 0.34 >More info Col-0 mock Whole seedling Original data GEO bulk
218 det2 light-dark -0.52 >More info -0.32 >More info det2 light light-dark Original data GEO bulk
219 ex2 flu dark 8hours/30 minute light 0.53 >More info 0.31 >More info col dark 8hours/30 minute light Original data GEO bulk
220 Mutant iaa5_6_19 0.50 >More info 0.34 >More info Col Original data GEO bulk
221 Mutant iaa17-6 0.30 >More info 0.54 >More info Col Original data GEO bulk
222 rrd1 IBA -0.69 >More info -0.15 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
223 Tsu-1 -Fe 48h 0.72 >More info 0.12 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
224 Tsu -Fe 48h Roots 0.72 >More info 0.12 >More info Tsu +Fe 24h Roots Original data GEO bulk
225 ataf1-1 mutant Col-0 Bgh inoculated 0.27 >More info 0.57 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
226 bZIP1ko mutant N+Light- 0.27 >More info 0.57 >More info WT-sib N+Light- whole plant Original data GEO bulk
227 max3GR24 (1 uM) -0.55 >More info -0.28 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
228 shoot control pSUC2 0.66 >More info 0.17 >More info shoot control total Original data GEO bulk
229 sid2-1 cold -0.20 >More info -0.63 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
230 OE WRKY63.3 high light 0.30 >More info 0.53 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
231 Leaf wounded 0.29 >More info 0.54 >More info Leaf control vegetative leaf Original data GEO bulk
232 Col-0 9 hpi A. brassicicola 0.27 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
233 Elevated CO2 leaf primordia 0.31 >More info 0.52 >More info Ambient CO2 leaf primordia leaf primordia Original data
234 9m.KCl 0.55 >More info 0.27 >More info To. KCl 14 day old Roots Original data GEO bulk
235 eto1-4 +393 0.66 >More info 0.16 >More info eto1-4 whole seedling Original data GEO bulk
236 aba3-1 0.28 >More info 0.54 >More info wt Original data GEO bulk
237 pmr5 pmr6 0.20 >More info 0.62 >More info Col-0 Original data GEO bulk
238 shoot hypoxia pRBCS 0.74 >More info 0.08 >More info shoot hypoxia total Original data GEO bulk
239 anac017-2 AntimycinA 3h -0.25 >More info -0.57 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
240 Col-0 SA 0.50 >More info 0.31 >More info Col-0 water complete seedling Original data
241 pnp1-1 1wk -P 0.64 >More info 0.17 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
242 elevated CO2 high Mg root -0.63 >More info -0.18 >More info atmospheric CO2 high Mg root Root Original data
243 upf1 0.29 >More info 0.52 >More info WT whole plant Original data GEO bulk
244 35S:RPS4 eds1-2 8h -0.28 >More info -0.53 >More info 35S:RPS4 8h leaves Original data
245 ckh1 CK25 0.57 >More info 0.24 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
246 ckh2 CK25 0.61 >More info 0.19 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
247 pil5 dark 0.65 >More info 0.15 >More info Col-0 dark Original data GEO bulk
248 scl3 0.55 >More info 0.25 >More info Col-0 whole root Original data GEO bulk
249 shoot hypoxia pKAT1 0.54 >More info 0.26 >More info shoot hypoxia total Original data GEO bulk
250 Col-0 Flg22 4h 0.29 >More info 0.51 >More info Col-0 H2O 4h Original data GEO bulk
251 Col whole leaf 5dpi 0.19 >More info 0.61 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
252 ptpks2 -0.15 >More info -0.65 >More info Col-WT leaves Original data GEO bulk
253 Col-Luc WT 3h antimycin A 0.26 >More info 0.54 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
254 Tsu -Fe 48h Shoots 0.26 >More info 0.54 >More info Tsu +Fe 24h Shoots Original data GEO bulk
255 rcf1-1 cold 0h 0.72 >More info 0.08 >More info WT cold 0h Control seedlings Original data GEO bulk
256 CMP 24hr 0.22 >More info 0.58 >More info Acetone 24hr root Original data GEO bulk
257 cpr5 0.23 >More info 0.57 >More info WT(COL) Original data GEO bulk
258 A6 mutant 0.52 >More info 0.27 >More info WT rosette leaves Rosette leaves Original data GEO bulk
259 RRE1 0.65 >More info 0.14 >More info Col C Original data GEO bulk
260 rsl4 -0.64 >More info -0.15 >More info Col-0 Control root Original data GEO bulk
261 C58 35dpi 0.73 >More info 0.06 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
262 Root submergence 7h 0.53 >More info 0.26 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
263 Phaseolicola 2 h (leaf) 0.24 >More info 0.55 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
264 camta1/3 warm 0.19 >More info 0.60 >More info WT warm entire aerial part Original data GEO bulk
265 WT+H2O2 0.18 >More info 0.61 >More info WT H2O2 Original data GEO bulk
266 abi3-6 12 DAF Seed 0.58 >More info 0.21 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
267 myb50 xylem 0.67 >More info 0.11 >More info wt xylem xylem Original data GEO bulk
268 ddm1 mutant seedlings -0.80 >More info 0.02 >More info control seedlings 10-day old whole seedling Original data GEO bulk
269 flu over-tAPX 0.17 >More info 0.61 >More info WT Col Original data GEO bulk
270 SA 4mM 0.12 >More info 0.66 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
271 ice1 control 0.22 >More info 0.56 >More info WT control Original data GEO bulk
272 endosperm paclobutrazol -0.54 >More info -0.23 >More info endosperm-control paclobutrazol endosperm Original data GEO bulk
273 CMV-WT 0.24 >More info 0.53 >More info Mock-At Aerial tissues Original data GEO bulk
274 bak1-3 +Pep2 10h 0.15 >More info 0.62 >More info WT +Pep2 10h Pep2 Original data GEO bulk
275 35S:RPS4 eds1-2 2h -0.21 >More info -0.56 >More info 35S:RPS4 2h leaves Original data
276 Elevated CO2 AMPLE N DAY 0.27 >More info 0.50 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
277 spx1 spx2 complete -0.63 >More info -0.13 >More info WT complete seedlings Original data
278 Imbibed 24 h ABA 3uM (seed) -0.63 >More info -0.13 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
279 Truncated AC2 T1 -0.56 >More info -0.20 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
280 WT light 0.79 >More info -0.03 >More info WT dark Original data GEO bulk
281 elf3-7-16ºC 0.54 >More info 0.22 >More info WT-16ºC Original data GEO bulk
282 6m.KNO3 -0.67 >More info -0.09 >More info To. KNO3 14 day old Roots Original data GEO bulk
283 B.cinerea 18 h infection 0.09 >More info 0.67 >More info Mock 18 h Original data Botrytis cinerea infection
284 safener treated 0.18 >More info 0.58 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
285 seed germinating in countinuous light 24h SL 0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
286 Botrytis cinerea 18h 0.09 >More info 0.67 >More info control 18h Original data GEO bulk
287 ein2-1 9 hpi A. brassicicola 0.15 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
288 AsAKiin11 T2 0.19 >More info 0.57 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
289 embryo ABA -0.53 >More info -0.22 >More info embryo-control ABA embryo Original data GEO bulk
290 abi3-6 16 DAF Seed 0.57 >More info 0.18 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
291 cell culture 4 h phytoprostane A1 0.22 >More info 0.53 >More info cell culture 4 h control Original data GEO bulk
292 Col0-PsmES4326-24hpi 0.14 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
293 sni1 0.22 >More info 0.53 >More info WT Original data GEO bulk
294 Callus 0.72 >More info 0.02 >More info Control for tissue data callus Original data GEO bulk
295 elevated CO2 normal Mg root -0.60 >More info -0.14 >More info atmospheric CO2 normal Mg root Root Original data
296 ahg3-1 -0.57 >More info -0.17 >More info ABA control Original data GEO bulk
297 C58 3hpi 0.64 >More info 0.10 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
298 Col-0 INA 48h 0.15 >More info 0.59 >More info Col-0 MOCK 48h Original data GEO bulk
299 inhibitor A Treated 0.21 >More info 0.53 >More info Negative Control Original data GEO bulk
300 WT-NOCO2 INFECTED 0.24 >More info 0.50 >More info WT-MOCK Original data GEO bulk
301 4C 2h(SOIL) 0.19 >More info 0.55 >More info 4C 0h(SOIL) Original data GEO bulk
302 Col-O low light 0.53 >More info 0.20 >More info Col-O bule light Original data GEO bulk
303 vtc2 day 7 induction 0.69 >More info 0.04 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
304 miR393 0h -0.09 >More info -0.64 >More info WT 0h Leaf tissue Original data GEO bulk
305 mtf1-1 0.56 >More info 0.16 >More info Col0 root Original data
306 Leafminer damaged seedlings 0.16 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
307 GA3 1 h (ga1) 0.63 >More info 0.09 >More info Mock 1 h (ga1) Original data Basic hormone treatment of seedlings
308 ckh2 CK0 0.63 >More info 0.09 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
309 afb3-1 2h KCl -0.51 >More info -0.21 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
310 atmyc2 Seedling BL+ABA -0.50 >More info -0.22 >More info WT Seedling BL+ABA Original data GEO bulk
311 shoot control pCER5 0.74 >More info -0.02 >More info shoot control total Original data GEO bulk
312 ft-1 10C long-day -0.51 >More info -0.21 >More info Ler 10C long-day seeds Original data GEO bulk
313 PRR5-VP 6h light on -0.51 >More info -0.21 >More info WT 6h light on whole plant Original data GEO bulk
314 Mutant siz1-3 0.20 >More info 0.52 >More info Col-0 Original data GEO bulk
315 root epidermis and lateral root cap -S -0.18 >More info -0.54 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
316 siz1-3 control 0.20 >More info 0.52 >More info Col-0 control Original data GEO bulk
317 VND6 0h -0.50 >More info -0.21 >More info wt 0h Original data GEO bulk
318 eif3h non-polysome -0.60 >More info -0.11 >More info WT non-polysome Original data GEO bulk
319 ga1-3/brm-1 0.57 >More info 0.14 >More info wt shoots Original data GEO bulk
320 endosperm ABA -0.58 >More info -0.13 >More info endosperm-control ABA endosperm Original data GEO bulk
321 8 hr ammonium 0.57 >More info 0.14 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
322 WT H2O2 3h 0.12 >More info 0.59 >More info WT water 3h 3h_H2O2 Original data GEO bulk
323 opr3 JA 0.5 h 0.19 >More info 0.52 >More info opr3 0 h Original data GEO bulk
324 eds16 whole leaf 6hpi -0.16 >More info -0.54 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
325 1.5 hr nitrate 0.71 >More info -0.01 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
326 pkl Mutant Uniconazole -0.61 >More info -0.09 >More info pkl Mutant mock Original data GEO bulk
327 S58-2 0.19 >More info 0.51 >More info wt Original data GEO bulk
328 Night Time Treatment 0.53 >More info 0.16 >More info Night Time Control 1hr white light pulse aerial rosette Original data
329 24h +Pi -0.65 >More info -0.04 >More info 24h -Pi root Original data GEO bulk
330 cct-1 mutant 9-day-old seedlings above-ground
portions		 -0.67 >More info -0.02 >More info WT 7-day-old seedlings above-ground portions seedling Original data
331 Protoplast Induced 0.04 >More info 0.65 >More info Uninduced Original data GEO bulk
332 Col-0 DCA 48h 0.14 >More info 0.55 >More info Col-0 MOCK 48h Original data GEO bulk
333 embryo paclobutrazol -0.51 >More info -0.18 >More info embryo-control paclobutrazol embryo Original data GEO bulk
334 35:SUB1A -0.60 >More info -0.09 >More info WT whole seedling Original data GEO bulk
335 dry seed 0 h -0.50 >More info -0.19 >More info Control for tissue data seed Original data GEO bulk
336 IAA7mII over-expressor IAA Treated -0.00 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
337 desiccated mature pollen grains -0.19 >More info -0.50 >More info hydrated pollen grains Original data GEO bulk
338 WT 2-4h Xanthomonas 0.18 >More info 0.51 >More info WT T0 Original data GEO bulk
339 xyl-grown cell culture- 1h 1mM Fru 0.06 >More info 0.63 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
340 ago4-1 0.53 >More info 0.15 >More info WT La-er whole plants Original data GEO bulk
341 gct-2 mutant 9-day-old seedlings above-ground
portions		 -0.68 >More info 0.00 >More info WT 7-day-old seedlings above-ground portions seedling Original data
342 camta1/2/3 24h cold 0.16 >More info 0.52 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
343 phr1 Shoot-Pi -0.70 >More info 0.02 >More info WT Root-Pi shoots Original data GEO bulk
344 6m.KCl -0.58 >More info -0.10 >More info To. KCl 14 day old Roots Original data GEO bulk
345 seed freshly harvested H -0.50 >More info -0.18 >More info Control for tissue data seed Original data GEO bulk
346 seed during stratification 1 h S -0.50 >More info -0.18 >More info Control for tissue data seed Original data GEO bulk
347 21h-DC3000 hrpA -0.11 >More info -0.57 >More info 21h-DC3000 leaves Original data GEO bulk
348 Light 0.5h polysome-bound 0.11 >More info 0.57 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
349 toc1-1-69hr 0.51 >More info 0.16 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
350 ein2 mutant roots mock -0.63 >More info -0.04 >More info roots mock Original data GEO bulk
351 +GA-30mins -0.69 >More info 0.02 >More info -30mins whole plant Original data GEO bulk
352 AgNO3 3 h 0.06 >More info 0.61 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
353 Dark 0.55 >More info 0.11 >More info Control Original data GEO bulk
354 Var2-1 roots 2hr KCl control -0.51 >More info -0.15 >More info Col0 roots 2hr KCl control root Original data GEO bulk
355 atsf1-2 mutant seedling 0.56 >More info 0.10 >More info Col-0 seedling seedlings Original data
356 per1 in Pi deficiency medium 0.51 >More info 0.15 >More info Col in Pi deficiency medium root Original data GEO bulk
357 hrpA 7h 0.14 >More info 0.52 >More info Mock 7h hrpA Original data GEO bulk
358 Brz220 12 h -0.53 >More info -0.12 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
359 pip3 At2g19270 TDNA 6h-5 -0.66 >More info 0.01 >More info Col-0 whole plant Original data GEO bulk
360 csn4-1 dark -0.79 >More info 0.14 >More info WT light Original data GEO bulk
361 pXVE:HA-EDM2-a untreated -0.13 >More info -0.52 >More info Col-0 untreated seedlings Original data GEO bulk
362 smg7b-1 0.14 >More info 0.51 >More info WT whole plant Original data GEO bulk
363 amiRAP aerobic -0.08 >More info -0.57 >More info WT aerobic aerobic Original data GEO bulk
364 Cor 24h 0.08 >More info 0.57 >More info Mock 24h Cor Original data GEO bulk
365 WT (Col-0) inflorescence drought day 10 -0.54 >More info -0.10 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
366 coi1-2 0.11 >More info 0.53 >More info Col-0 mock Whole seedling Original data GEO bulk
367 camta1/2/3 warm 0.14 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
368 shoot hypoxia pSUC2 0.58 >More info 0.06 >More info shoot hypoxia total Original data GEO bulk
369 cpr5npr1svi1 0.07 >More info 0.56 >More info WT(COL) Original data GEO bulk
370 hni9 low nitrogen -0.50 >More info -0.13 >More info WT low nitrogen roots Original data GEO bulk
371 mutant acs9B (single mutant) -0.55 >More info -0.08 >More info col control (single mutant) Original data GEO bulk
372 bbx24 in With Light 0.58 >More info 0.05 >More info WT in With Light light seedling Original data
373 abi4-102 -lincomycin 0.52 >More info 0.11 >More info Col-0 -lincomycin Original data GEO bulk
374 pip3 At2g19270 TDNA 6h-1 -0.67 >More info 0.04 >More info Col-0 whole plant Original data GEO bulk
375 root hypoxia pSCR 0.54 >More info 0.09 >More info root hypoxia total hypoxia root Original data GEO bulk
376 Light 0.5h steady-state 0.02 >More info 0.61 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
377 dense canopy 0.08 >More info 0.55 >More info single (control) petiole Original data GEO bulk
378 elevated CO2 low Mg root -0.50 >More info -0.12 >More info atmospheric CO2 low Mg root Root Original data
379 ALC Toc1 light-light EtOH -0.53 >More info -0.09 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
380 Octopus mutant DYG25 -0.54 >More info -0.08 >More info WS Original data GEO bulk
381 15m light -0.54 >More info -0.08 >More info before light whole seedlings Original data GEO bulk
382 Col whole leaf 7dpi 0.12 >More info 0.50 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
383 col-5 hrpA 12h 0.12 >More info 0.50 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
384 aerial organ callus inducing medium 96 h 0.64 >More info -0.03 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
385 WT AntimycinA 3h 0.00 >More info 0.61 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
386 bio4-1 mutant watered00µM biotin leaves -0.07 >More info -0.53 >More info bio4-1 mutant leaves leaves Original data GEO bulk
387 cpr5 0.09 >More info 0.51 >More info WT seedling Original data GEO bulk
388 CCA1-ox 6am non-polysomal 0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
389 KCl germinant -0.55 >More info -0.04 >More info Millipore Water germinant KCl seedling Original data
390 pho1 0.04 >More info 0.55 >More info Col2WT Original data GEO bulk
391 Mutant ap2-6(shoot apex) 0.51 >More info 0.08 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
392 ein2 mutant roots IAA -0.51 >More info -0.08 >More info roots ethylene Original data GEO bulk
393 WT-Dry 0.08 >More info 0.51 >More info WT-CK dehydration treatment 1h Original data
394 WT(Ler) Rc15 -0.67 >More info 0.09 >More info WT(Ler) Dark Original data GEO bulk
395 AB -0.65 >More info 0.07 >More info COL seedling Original data
396 bbx24 in Simulated Shade 0.64 >More info -0.07 >More info WT in simulated shade shade seedling Original data
397 Mature roots 0.51 >More info 0.06 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
398 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.56 >More info -0.01 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
399 Cycloheximide 3 h 0.07 >More info 0.50 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
400 Col-0 HS -0.09 >More info 0.66 >More info Col-0 control heat shocked seedling Original data GEO bulk
401 WT (Col-0) heat shock -0.09 >More info 0.66 >More info WT (Col-0) whole seedling Original data GEO bulk
402 cpr5scv1 0.07 >More info 0.50 >More info WT(COL) Original data GEO bulk
403 NJ15 0.07 >More info 0.50 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
404 iron minus 24h -0.65 >More info 0.09 >More info iron +24h root Original data GEO bulk
405 pepr1-1 Pepr2-3 +Pep2 2h 0.07 >More info -0.63 >More info WT +Pep2 2h Pep2 Original data GEO bulk
406 aerial organ callus inducing medium 12 h 0.56 >More info -0.01 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
407 Te 3d 0.53 >More info 0.02 >More info Te CA Leaves Original data
408 intact root control 0.52 >More info 0.03 >More info Control for tissue data mock whole root Original data GEO bulk
409 seedlings + TSA 0.56 >More info -0.01 >More info control seedlings 10-day old whole seedling Original data GEO bulk
410 Ws HS -0.01 >More info 0.56 >More info Ws control heat shocked seedling Original data GEO bulk
411 WT-SA -0.01 >More info 0.56 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
412 Laer pretreat GA Flg22 1h -0.16 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
413 seedling 24h after HZE WT 0.50 >More info 0.04 >More info seedling day 2 unirradiated WT 24h Original data
414 iron minus 6 h -0.68 >More info 0.14 >More info iron +6 h root Original data GEO bulk
415 ARF10 0.64 >More info -0.10 >More info Col-0 Original data GEO bulk
416 WT hypoxia 0.62 >More info -0.08 >More info WT normoxia whole rosette Original data
417 siliques WT hypoxia 0.53 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
418 downy mildew cotyledons late stage -0.03 >More info 0.57 >More info mock inoculated Cotyledons Original data GEO bulk
419 WT+chitooctaose -0.03 >More info 0.57 >More info WT+water chitooctaose seedlings Original data GEO bulk
420 Seedling-HeatStressed TOTALmRNA -0.04 >More info 0.58 >More info Seedling-control TOTALmRNA seedling Original data
421 Heat Recovery 24 h (root) -0.72 >More info 0.19 >More info Stress mock 24 h (root) Original data Stress treatments
422 Nuclear GSH1 -0.51 >More info -0.02 >More info Cytoplasmic GSH1 Control Original data GEO bulk
423 Full AC2 T2 0.53 >More info 0.00 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
424 DC3000 24h -0.04 >More info 0.57 >More info Mock 24h DC3000 Original data GEO bulk
425 Mutant iaa5_6_19(IAA) 0.53 >More info -0.01 >More info Col (IAA) Original data GEO bulk
426 35S-MIF1 dark grown -0.66 >More info 0.14 >More info Dark-grown WT control Original data GEO bulk
427 E.orontii Infection 6 h -0.02 >More info 0.54 >More info Uninfection 6 h Original data Elicitor treatments
428 atgsnor1-1 0.02 >More info -0.54 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
429 low CO2 + light -0.11 >More info 0.63 >More info normal CO2 + light Original data GEO bulk
430 pif5 high R/FR -0.00 >More info 0.52 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
431 ga1-3 scl3-1 0.57 >More info -0.06 >More info ga1-3 whole root Original data
432 Fenclorim 4hr -0.13 >More info 0.64 >More info Acetone 4hr root Original data GEO bulk
433 Imbibed 3 h (seed) 0.52 >More info -0.02 >More info Dry seed Original data Time course of early seed germination
434 plant (tga2-5-6) 4h phytoprostane A1 -0.02 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
435 Seedling-HeatStressed POLYSOMESmRNA -0.06 >More info 0.56 >More info Seedling-control POLYSOMESmRNA seedling Original data
436 Col-0 red light 0.57 >More info -0.07 >More info Col-0 dark Original data GEO bulk
437 gun1-1 -lincomycin 0.51 >More info -0.02 >More info Col-0 -lincomycin Original data GEO bulk
438 eif3h polysome -0.70 >More info 0.21 >More info WT polysome Original data GEO bulk
439 phyABDE 4-day dark- 2 hours Rc50 -0.62 >More info 0.13 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
440 OsSAP11 expressing 0.01 >More info -0.50 >More info WT seedlings Original data GEO bulk
441 1 h Light IP RNA 0.03 >More info -0.52 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
442 oligomycin 4 h -0.06 >More info 0.54 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
443 24h SL WT 0.53 >More info -0.06 >More info 0 h WT seed Original data
444 Stem 1st node 0.50 >More info -0.03 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
445 FarRed Light 4 h -0.14 >More info 0.61 >More info White Light 4 h Original data Light treatments
446 cat2-2; 8h switch to ambient CO2 concentrations; -0.12 >More info 0.59 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
447 35S:RPS4 eds1-2 24h 0.05 >More info -0.51 >More info 35S:RPS4 24h leaves Original data
448 12m.KNO3 -0.59 >More info 0.13 >More info To. KNO3 14 day old Roots Original data GEO bulk
449 WT (Ler) CK200 0.60 >More info -0.14 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
450 Red/FR Light45min -0.24 >More info 0.70 >More info FarRed Light 45min Original data Light treatments
451 WT drought -0.15 >More info 0.61 >More info WT control All aerial tissue Original data GEO bulk
452 BLM -0.51 >More info 0.06 >More info CK BLM seedling Original data
453 triplod male excess 0.61 >More info -0.16 >More info tetraploid Original data GEO bulk
454 Col-0 +lincomycin 0.55 >More info -0.11 >More info Col-0 -lincomycin Original data GEO bulk
455 Stem tissue 2 days NAA -0.55 >More info 0.11 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
456 24h SL Attim 17-1 1 0.52 >More info -0.08 >More info 0 h Attim 17-1 1 seed Original data
457 WT (Col-0) inflorescence drought day 5 -0.51 >More info 0.09 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
458 WT(Ler) Rc50 -0.67 >More info 0.25 >More info WT(Ler) Dark Original data GEO bulk
459 WT NAA 2h 0.16 >More info -0.58 >More info WT 0h Leaf tissue Original data GEO bulk
460 WT Rc50 -0.66 >More info 0.25 >More info WT Dark red light whole seedling Original data GEO bulk
461 2hr transitory KNO3 EPR cell -0.53 >More info 0.12 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
462 Col-0 37C -0.14 >More info 0.55 >More info Col-0 22C Original data GEO bulk
463 Paclobutrazol 3 h 0.57 >More info -0.17 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
464 IBM1 knockout -0.51 >More info 0.12 >More info WT Original data GEO bulk
465 C58 6dpi 0.52 >More info -0.13 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
466 Mutant hy5 (High Light) -0.51 >More info 0.12 >More info Col-0 (High Light) Original data GEO bulk
467 8-DAC chr11-1chr17-1 -0.53 >More info 0.14 >More info 8-DAC Col-0 leaf explants Original data
468 hy5 high light -0.51 >More info 0.12 >More info Col-O high light Original data GEO bulk
469 erf104-ko Flg22 4h -0.14 >More info 0.53 >More info erf104-ko H2O 4h Original data GEO bulk
470 siliques AtHb1 control -0.13 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
471 WT powdery mildew -0.16 >More info 0.55 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
472 sfr6 drought 0.22 >More info -0.61 >More info WT drought All aerial tissue Original data GEO bulk
473 Root GLU1-KO 0.57 >More info -0.18 >More info Root Col(0) roots Original data GEO bulk
474 Mutant siz1-3 (Drought) -0.12 >More info 0.50 >More info Col-0 (Drought) Original data GEO bulk
475 siz1-3 drought -0.12 >More info 0.50 >More info Col-0 drought Original data GEO bulk
476 4C 1h -0.19 >More info 0.57 >More info 4C 0h Original data GEO bulk
477 Shoot apex transition (before bolting) 0.50 >More info -0.13 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
478 pif1pif3pif4pif5 mutant (pifq) 0.51 >More info -0.15 >More info WT (col) Original data GEO bulk
479 sdg2 -0.52 >More info 0.17 >More info wt seedling Original data GEO bulk
480 9m.KNO3 -0.50 >More info 0.15 >More info To. KNO3 14 day old Roots Original data GEO bulk
481 pif4pif5 mut dark -0.51 >More info 0.17 >More info WT dark Original data GEO bulk
482 myb50 cork 0.51 >More info -0.17 >More info wt cork cork Original data GEO bulk
483 1h +Pi 0.22 >More info -0.54 >More info 1h -Pi root Original data GEO bulk
484 phr1 Root-Pi -0.55 >More info 0.24 >More info WT Root+Pi roots Original data GEO bulk
485 IAA Treated 0.22 >More info -0.52 >More info Negative Control Original data GEO bulk
486 Norflurazon 0.53 >More info -0.24 >More info Col-0 Original data GEO bulk
487 tga1 tga4 2h KNO3 0.55 >More info -0.26 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
488 Norflurazon 0.53 >More info -0.24 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
489 Methyl Jasmonate 0.5 h -0.31 >More info 0.59 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
490 L2.5 mutant -0.51 >More info 0.26 >More info Wt Original data GEO bulk
491 chito-tetramer -0.25 >More info 0.50 >More info Col Mock Original data GEO bulk
492 WT 3H Cold -0.37 >More info 0.62 >More info WT control Original data GEO bulk
493 PNO8 12 h -0.54 >More info 0.31 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
494 20d after anthesis -0.59 >More info 0.36 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
495 Dark 44min pls RedLigh 1min -0.27 >More info 0.50 >More info Dark 45 min Original data Light treatments
496 myb3 myb3r4d -0.55 >More info 0.34 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
497 6h +Pi 0.55 >More info -0.34 >More info 6h -Pi root Original data GEO bulk
498 chito-octamer -0.29 >More info 0.50 >More info Col Mock Original data GEO bulk
499 ARR22-ox -0.69 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
500 dark-hs -0.39 >More info 0.54 >More info dark-control seedling Original data