4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on ptpks2
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List of experiments correlated with "ptpks2"  Help Download transcriptome of top 30
Score Experiment Correlation from
ptpks2		 Correlation to
ptpks2		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 ptpks2 1.00 >More info 1.00 >More info Col-WT leaves Original data GEO bulk
2 sex4-3 0.76 >More info 0.82 >More info Col-WT leaves Original data GEO bulk
3 PNO8 12 h -0.80 >More info -0.75 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
4 1 h Light Total RNA 0.71 >More info 0.66 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
5 Shoot submergence 24h -0.77 >More info -0.59 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
6 low CO2 + dark -0.76 >More info -0.59 >More info normal CO2 + light Original data GEO bulk
7 Day Time Treatment 0.74 >More info 0.59 >More info Day Time Control 1hr white light pulse aerial rosette Original data
8 Shoot dark control 24h -0.75 >More info -0.58 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
9 high-R:FR bud axillary 0.77 >More info 0.55 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
10 Shoot dark control 7h -0.74 >More info -0.58 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
11 Col-0 C2H4 24h -0.77 >More info -0.53 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
12 erf104-ko H2O 4h 0.69 >More info 0.61 >More info Col-0 H2O 4h Original data GEO bulk
13 35S::MBF1c -0.78 >More info -0.48 >More info control Original data GEO bulk
14 seedling 1.5h after HZE atm-1 -0.71 >More info -0.55 >More info seedling day 1 unirradiated atm-1 1.5h Original data
15 WT hypoxia -0.67 >More info -0.58 >More info WT normoxia whole rosette Original data
16 low CO2 + light -0.75 >More info -0.49 >More info normal CO2 + light Original data GEO bulk
17 tetraploid -0.72 >More info -0.52 >More info diploid Original data GEO bulk
18 Full C2 T2 -0.67 >More info -0.55 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
19 6h volatiles Sp. HRO-C48 -0.68 >More info -0.53 >More info 6h untreated whole seedling Original data GEO bulk
20 seedling 24h after Gamma atm-1 0.70 >More info 0.50 >More info seedling day 2 unirradiated atm-1 24h Original data
21 penta mutant (higher order mutant) -0.75 >More info -0.45 >More info col control (higher order mutant) Original data GEO bulk
22 sfr6 drought 0.61 >More info 0.58 >More info WT drought All aerial tissue Original data GEO bulk
23 gun1gun5 drak pretreated -0.77 >More info -0.42 >More info WT drak pretreated Original data GEO bulk
24 seedling 1.5h after HZE WT -0.71 >More info -0.47 >More info seedling day 1 unirradiated WT 1.5h Original data
25 rosettes WT drought -0.69 >More info -0.49 >More info rosettes WT watered Original data GEO bulk
26 4d red light grown hmr-5 seedlings -0.69 >More info -0.49 >More info 4d red light grown WT(Col-0) seedlings Original data
27 detached inflorescences 24h -0.73 >More info -0.43 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
28 elf3-7-16ºC 0.73 >More info 0.43 >More info WT-16ºC Original data GEO bulk
29 Col-0 WT HL 3h 0.79 >More info 0.36 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
30 gabaculin -0.78 >More info -0.37 >More info WT Col-0 seedling Original data GEO bulk
31 Night Time Treatment 0.74 >More info 0.40 >More info Night Time Control 1hr white light pulse aerial rosette Original data
32 ARR22-ox 0.66 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
33 cca1-lhy before light -0.67 >More info -0.47 >More info before light whole seedlings Original data GEO bulk
34 RGA-GR-DEX -0.54 >More info -0.60 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
35 sex1-3 -0.57 >More info -0.57 >More info Col-WT leaves Original data GEO bulk
36 dcl1-7 0.69 >More info 0.45 >More info Ler Original data GEO bulk
37 WT (Col) glucose 0.77 >More info 0.36 >More info WT (Col) glucose seedlings Original data GEO bulk
38 Light 4h steady-state 0.64 >More info 0.49 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
39 Dark 6h hml -0.72 >More info -0.41 >More info 0h hml Original data
40 Whole root - S 3H 0.76 >More info 0.37 >More info Whole root - S 0H Original data GEO bulk
41 Light 4h polysome-bound 0.65 >More info 0.47 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
42 leaf blade in D -0.73 >More info -0.38 >More info leaf blade in WL leaf blades Original data GEO bulk
43 Leaf systemic 0.66 >More info 0.44 >More info Leaf control vegetative leaf Original data GEO bulk
44 3x(p) -0.65 >More info -0.45 >More info 2x two week old seedlings Original data
45 Pseudomonas -0.77 >More info -0.33 >More info Control pseudomonas treated whole seedling Original data GEO bulk
46 DVL4 induced -0.62 >More info -0.47 >More info emptyvectordex Original data GEO bulk
47 Dark 2day hml -0.67 >More info -0.41 >More info 0h hml Original data
48 leaf blade in FRD -0.66 >More info -0.42 >More info leaf blade in WL leaf blades Original data GEO bulk
49 eds16 whole leaf 7d UI -0.30 >More info -0.78 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
50 seed germinating in countinuous light 24h SL 0.41 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
51 ein2-PsmES4326-24hpi 0.53 >More info 0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
52 Dark 3day hml -0.64 >More info -0.43 >More info 0h hml Original data
53 rGRF -0.67 >More info -0.40 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
54 Dark 6h wt -0.68 >More info -0.39 >More info 0h wt Original data
55 Dry midnight 0.59 >More info 0.48 >More info Wet midnight water-limited whole rosette Original data GEO bulk
56 seedling 24h after Gamma WT 0.69 >More info 0.38 >More info seedling day 2 unirradiated WT 24h Original data
57 ADD3 0.64 >More info 0.42 >More info WT aerial part Original data GEO bulk
58 Dark 1day hml -0.73 >More info -0.33 >More info 0h hml Original data
59 pad4-PsmES4326-24hpi 0.62 >More info 0.44 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
60 Dark 6h ivd -0.63 >More info -0.43 >More info 0h ivd Original data
61 sdg8-2 mutant 0.83 >More info 0.23 >More info wild type leaf Original data GEO bulk
62 Dark 3day ivd -0.55 >More info -0.50 >More info 0h ivd Original data
63 35S:LOB-GR mock 0.71 >More info 0.34 >More info Col mock mock seedling Original data GEO bulk
64 FarRed Light 45min -0.63 >More info -0.42 >More info White Light 45min Original data Light treatments
65 Seedling-HeatStressed POLYSOMESmRNA -0.68 >More info -0.37 >More info Seedling-control POLYSOMESmRNA seedling Original data
66 WT AntimycinA 3h -0.67 >More info -0.38 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
67 6 h SL Attim 17-1 1 0.66 >More info 0.39 >More info 0 h Attim 17-1 1 seed Original data
68 hai1-2 low water potential -0.70 >More info -0.35 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
69 rosettes myoox drought -0.58 >More info -0.47 >More info rosettes myoox watered Original data GEO bulk
70 Col-0 2HS -0.59 >More info -0.45 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
71 Laer pretreat GA Flg22 2h -0.64 >More info -0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
72 AtLysM RLK1 mutant water 0.60 >More info 0.44 >More info WT water Original data GEO bulk
73 AmGSTF1 expressor -0.72 >More info -0.32 >More info WT leaf tissue Original data GEO bulk
74 Dark 1day wt -0.70 >More info -0.34 >More info 0h wt Original data
75 Dark 2day wt -0.64 >More info -0.40 >More info 0h wt Original data
76 triplod male excess 0.55 >More info 0.48 >More info tetraploid Original data GEO bulk
77 Heat 2 days recovery -0.69 >More info -0.34 >More info Mock 2 days recovery seedling Original data GEO bulk
78 Whole root - S 12H 0.77 >More info 0.26 >More info Whole root - S 0H Original data GEO bulk
79 ms35 silique stage 5 0.70 >More info 0.32 >More info Ler .5 anther and filament Original data GEO bulk
80 Dark 3day wt -0.59 >More info -0.43 >More info 0h wt Original data
81 35S::ERF104 H2O 4h 0.57 >More info 0.45 >More info Col-0 H2O 4h Original data GEO bulk
82 Col-0 DEX Shade -0.66 >More info -0.36 >More info Col-0 DEX WL seedlings Original data
83 COL-0-Fe--shoot 0.78 >More info 0.24 >More info COL-0-Ctrl--shoot shoot Original data
84 Ambient CO2 expanding leaf 0.38 >More info 0.64 >More info Control for tissue data expanding leaf Original data
85 eto1-4 + AVG -0.62 >More info -0.39 >More info eto1-4 whole seedling Original data GEO bulk
86 shoot hypoxia total -0.58 >More info -0.42 >More info shoot control total Original data GEO bulk
87 camta1-2 -0.64 >More info -0.36 >More info Col-0-WT Original data GEO bulk
88 hepta mutant (higher order mutant) -0.65 >More info -0.35 >More info col control (higher order mutant) Original data GEO bulk
89 WT+sucrose 0.61 >More info 0.39 >More info WT+no sugars rosette leaves Original data GEO bulk
90 WT Shoot Hypoxia -0.61 >More info -0.39 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
91 Seedling-HeatStressed TOTALmRNA -0.66 >More info -0.34 >More info Seedling-control TOTALmRNA seedling Original data
92 Ambient CO2 leaf primordia 0.38 >More info 0.62 >More info Control for tissue data leaf primordia Original data
93 essp4/sdg8-5 mutant 0.79 >More info 0.20 >More info wild type leaf Original data GEO bulk
94 WT polysome 0.58 >More info 0.41 >More info WT non-polysome Original data GEO bulk
95 6m.KNO3 -0.55 >More info -0.44 >More info To. KNO3 14 day old Roots Original data GEO bulk
96 6 h SL WT 0.59 >More info 0.39 >More info 0 h WT seed Original data
97 WT Red light 18h 0.52 >More info 0.46 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
98 pif1-2 dark -0.53 >More info -0.45 >More info Wt dark Original data GEO bulk
99 CHLD reduction 0.75 >More info 0.23 >More info Col-0 dex green tissue Original data GEO bulk
100 Mutant pif1-2 (Dark etiol) -0.53 >More info -0.45 >More info Col-0 (Dark etiol) Original data GEO bulk
101 Dark 4 h pls UV-AB 5min 0.65 >More info 0.33 >More info Dark 4 h Original data Light treatments
102 6h volatiles Sm. R3089 -0.54 >More info -0.43 >More info 6h untreated whole seedling Original data GEO bulk
103 oas-a1.1 root 0.72 >More info 0.25 >More info WT-Untreated Root Original data GEO bulk
104 rao2 water 3h -0.66 >More info -0.31 >More info WT water 3h 3h_water Original data GEO bulk
105 phyABDE Rc50 0.64 >More info 0.33 >More info phyABDE Dark red light whole seedling Original data GEO bulk
106 4h decapitation 0.73 >More info 0.24 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
107 triploid female excess 0.32 >More info 0.65 >More info tetraploid Original data GEO bulk
108 Nicotinamide-93hr -0.54 >More info -0.42 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
109 pad2-PsmES4326-24hpi 0.52 >More info 0.44 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
110 WT mitomycin C 0.77 >More info 0.19 >More info WT mock shoot apical meristem Original data
111 lht1 untreated 0.62 >More info 0.34 >More info WT untreated untreated leaf Original data GEO bulk
112 Blue Light 4 h 0.61 >More info 0.35 >More info White Light 4 h Original data Light treatments
113 SQ8 roots 2hr KNO3 nitrogen -0.67 >More info -0.28 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
114 camta1/2/3 24h cold -0.68 >More info -0.27 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
115 eds16 whole leaf 3dpi -0.39 >More info -0.56 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
116 Dark 1day ivd -0.62 >More info -0.33 >More info 0h ivd Original data
117 penta Control -0.52 >More info -0.43 >More info Laer Control leaf discs Original data GEO bulk
118 exo70A1 -0.65 >More info -0.30 >More info Col-0 whole plant Original data GEO bulk
119 ced1 0.60 >More info 0.35 >More info WT PEG 6hr seedlings Original data GEO bulk
120 seed germinating in countinuous light 6 h SL 0.36 >More info 0.59 >More info Control for tissue data seed Original data GEO bulk
121 seed germinating in countinuous light 48 h SL 0.35 >More info 0.60 >More info Control for tissue data seed Original data GEO bulk
122 col-5 DC3000 12h -0.38 >More info -0.57 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
123 CMP 24hr -0.54 >More info -0.40 >More info Acetone 24hr root Original data GEO bulk
124 gun4-1 -0.69 >More info -0.25 >More info WT Col-0 seedling Original data GEO bulk
125 sdg2 0.60 >More info 0.34 >More info wt seedling Original data GEO bulk
126 pif4pif5 mut 1h FR 0.73 >More info 0.21 >More info WT 1h FR Original data GEO bulk
127 Whole root - S 24H 0.70 >More info 0.24 >More info Whole root - S 0H Original data GEO bulk
128 flu dark 8hours/30 minute light -0.58 >More info -0.36 >More info col dark 8hours/30 minute light Original data GEO bulk
129 root - 01% oxygen - 2h -0.60 >More info -0.34 >More info root - 21% oxygen - 2h Original data GEO bulk
130 seedling 0.34 >More info 0.60 >More info Control for tissue data seedling Original data GEO bulk
131 mil4 sid2 -0.67 >More info -0.26 >More info Col rosettes Original data GEO bulk
132 Nicotinamide-69hr -0.55 >More info -0.38 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
133 Paclobutrazol 12 h -0.72 >More info -0.21 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
134 Uniconazole 12 h -0.75 >More info -0.18 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
135 12h Col-0 0.65 >More info 0.27 >More info 00h Col-0 Original data GEO bulk
136 Apex mir-3TCP 14DAS 0.53 >More info 0.39 >More info Apex Col 14DAS Original data GEO bulk
137 AsAKiin11 T2 -0.39 >More info -0.53 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
138 vte1-1 3d vernalization 0.71 >More info 0.21 >More info WT 3d vernalization Original data GEO bulk
139 WT (Col-0) inflorescence drought day 5 -0.59 >More info -0.33 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
140 CMP 4hr -0.57 >More info -0.35 >More info Acetone 4hr root Original data GEO bulk
141 miR393 0h 0.61 >More info 0.31 >More info WT 0h Leaf tissue Original data GEO bulk
142 rao1-2 0.72 >More info 0.20 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
143 cca1-lhy 30m light -0.51 >More info -0.40 >More info 30m light whole seedlings Original data GEO bulk
144 mutant acs6E (single mutant) 0.67 >More info 0.24 >More info col control (single mutant) Original data GEO bulk
145 WT cotyledons 0.28 >More info 0.63 >More info Control for tissue data cotyledons Original data
146 spx1 spx2 complete 0.73 >More info 0.18 >More info WT complete seedlings Original data
147 4d red light grown hmr-22 seedlings -0.70 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
148 Octopus mutant DYG25 0.72 >More info 0.19 >More info WS Original data GEO bulk
149 Nicotinamide-65hr -0.62 >More info -0.29 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
150 MG132 3 h 0.56 >More info 0.34 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
151 sid2 -0.65 >More info -0.25 >More info Col rosettes Original data GEO bulk
152 Dark 4 h pls RedLight 1min 0.52 >More info 0.38 >More info Dark 4 h Original data Light treatments
153 Hypoxic prt6 -0.63 >More info -0.27 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
154 tbf1-mock spray -0.24 >More info -0.66 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
155 anac017-1 water 3h -0.70 >More info -0.20 >More info WT water 3h 3h_water Original data GEO bulk
156 ebs Pool -0.57 >More info -0.33 >More info Ler Pool seedling Original data GEO bulk
157 spch -0.69 >More info -0.21 >More info Col-0 WT whole seedling Original data GEO bulk
158 Red Light 4 h -0.29 >More info -0.61 >More info White Light 4 h Original data Light treatments
159 tt4 UV -0.30 >More info -0.60 >More info UV aerial region Original data GEO bulk
160 seed germinating in countinuous light 12 h SL 0.33 >More info 0.57 >More info Control for tissue data seed Original data GEO bulk
161 ulp1c ulp1d -0.55 >More info -0.34 >More info col Original data GEO bulk
162 A6 mutant 0.61 >More info 0.28 >More info WT rosette leaves Rosette leaves Original data GEO bulk
163 WT H2O2 3h -0.68 >More info -0.21 >More info WT water 3h 3h_H2O2 Original data GEO bulk
164 2 hr Hypoxia Total RNA -0.62 >More info -0.27 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
165 24h SL Attim 17-1 1 0.51 >More info 0.38 >More info 0 h Attim 17-1 1 seed Original data
166 efr-1 untreated 0.36 >More info 0.53 >More info WT untreated untreated Original data GEO bulk
167 leaf 0.28 >More info 0.61 >More info Control for tissue data leaf Original data GEO bulk
168 Osmotic Stress 24 h (shoot) -0.55 >More info -0.33 >More info Stress mock 24 h (shoot) Original data Stress treatments
169 short 12-degree- 0.55 >More info 0.33 >More info control short Original data GEO bulk
170 csn5 (csn5a-2 csn5b) dark 0.54 >More info 0.34 >More info WT dark Original data GEO bulk
171 estradiole-induced ANAC059 0.68 >More info 0.20 >More info transgenic (empty vector inducible system) Original data GEO bulk
172 Nicotinamide-73hr -0.56 >More info -0.32 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
173 cdm1 mutant floral young floral buds 0.76 >More info 0.12 >More info WT floral yound floral buds Unopen flower buds Original data
174 Col-7 Sucrose 0.77 >More info 0.11 >More info col-7 Original data GEO bulk
175 aba2 1% sucrose 12-day-old -0.51 >More info -0.37 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
176 ex1 flu dark 8hours/30 minute light -0.35 >More info -0.53 >More info col dark 8hours/30 minute light Original data GEO bulk
177 rpoTmp(line) untreated -0.58 >More info -0.30 >More info WT(Col0) untreated (control rpoTmp) leaf Original data
178 CBF3 100mM NaCl -0.59 >More info -0.29 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
179 Root submergence 7h -0.69 >More info -0.19 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
180 mpk6-ko H2O 4h 0.29 >More info 0.59 >More info Col-0 H2O 4h Original data GEO bulk
181 siliques 0.30 >More info 0.58 >More info Control for tissue data Original data GEO bulk
182 Cd 18h root 0.68 >More info 0.19 >More info WT-Untreated Root Original data GEO bulk
183 hen1 0.68 >More info 0.19 >More info Ler Original data GEO bulk
184 Mutant cry1 -0.53 >More info -0.34 >More info Col-0 Original data GEO bulk
185 0h light (+Lincomycin) 0.68 >More info 0.19 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
186 Dry pre-dawn 0.53 >More info 0.34 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
187 cry1 low light -0.53 >More info -0.34 >More info Col-O low light Original data GEO bulk
188 Transgenic LEC2GR Seedling 1h Dex 0.63 >More info 0.24 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
189 35S:GIF -0.52 >More info -0.35 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
190 Imbibed 3 h (seed) 0.60 >More info 0.27 >More info Dry seed Original data Time course of early seed germination
191 pepr1-1 Pepr2-3 +Pep2 2h 0.61 >More info 0.26 >More info WT +Pep2 2h Pep2 Original data GEO bulk
192 3d old, both 10mM sucrose and 0.2µM SMX 0.79 >More info 0.08 >More info control Whole seedling Original data GEO bulk
193 ein2 1% sucrose 14-day-old 0.63 >More info 0.24 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
194 msg2 0.52 >More info 0.35 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
195 Shoot apex transition (before bolting) 0.25 >More info 0.62 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
196 Inflorescences ler 0.29 >More info 0.58 >More info Control for tissue data inflorescences Original data GEO bulk
197 ga1-3 scl3-1 0.54 >More info 0.32 >More info ga1-3 whole root Original data
198 OsRLCK253 expressing 0.52 >More info 0.34 >More info WT seedlings Original data GEO bulk
199 Whole root - S 48H 0.67 >More info 0.19 >More info Whole root - S 0H Original data GEO bulk
200 csn4-1 mutant 0.53 >More info 0.33 >More info WT dark Original data GEO bulk
201 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.30 >More info 0.56 >More info Control for tissue data Original data GEO bulk
202 flower 0.30 >More info 0.56 >More info Control for tissue data flower Original data GEO bulk
203 oligomycin 4 h -0.64 >More info -0.22 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
204 gun1-9 norflurazon -0.63 >More info -0.23 >More info gun1-9 control Original data GEO bulk
205 VND6 0h 0.72 >More info 0.14 >More info wt 0h Original data GEO bulk
206 Propiconazole 12 h -0.65 >More info -0.21 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
207 Rosette leaf No12 0.23 >More info 0.63 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
208 Flower (stage12) 0.28 >More info 0.58 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
209 B5 +AA -0.25 >More info -0.61 >More info B5 -AA B5 media and treated with AA Original data
210 Root submergence 24h -0.68 >More info -0.17 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
211 rGRF3x35S:GIF -0.66 >More info -0.19 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
212 Cd 24h root -0.66 >More info -0.19 >More info WT-Untreated Shoot Original data GEO bulk
213 PRR5-VP 6h light on 0.66 >More info 0.19 >More info WT 6h light on whole plant Original data GEO bulk
214 arr10 arr12 0.61 >More info 0.24 >More info WT Original data GEO bulk
215 lht1 PstDC3000 48h 0.62 >More info 0.23 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
216 IRP1-OE-Ctrl--shoot 0.77 >More info 0.08 >More info COL-0-Ctrl--shoot shoot Original data
217 Carpels stage15 0.25 >More info 0.60 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
218 NAA +AA -0.25 >More info -0.60 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
219 12h-DC3000 avrRpm1 -0.52 >More info -0.32 >More info 12h-DC3000 leaves Original data GEO bulk
220 amiRAP aerobic 0.53 >More info 0.31 >More info WT aerobic aerobic Original data GEO bulk
221 mkk1 24h BTH rep -0.55 >More info -0.29 >More info Col-0 24h BTH rep Original data GEO bulk
222 Aerobic prt6 -0.51 >More info -0.33 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
223 10mM sucrose 0.78 >More info 0.06 >More info control Whole seedling Original data GEO bulk
224 Elevated CO2 AMPLE N DAY 0.32 >More info 0.52 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
225 Col 3d -0.28 >More info -0.56 >More info Col CA Leaves Original data
226 gpa1-4/agb1-2 clean-air 3h -0.62 >More info -0.22 >More info Col clean-air 3h clean-air Original data GEO bulk
227 til1-1 37C -0.54 >More info -0.29 >More info Col-0 37C Original data GEO bulk
228 E.orontii Infection 6 h -0.56 >More info -0.27 >More info Uninfection 6 h Original data Elicitor treatments
229 Whole root - S 72H 0.68 >More info 0.15 >More info Whole root - S 0H Original data GEO bulk
230 tor mutant glucose -0.67 >More info -0.16 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
231 seed germinating in countinuous light 1 h SL 0.29 >More info 0.54 >More info Control for tissue data seed Original data GEO bulk
232 Callus 0.27 >More info 0.56 >More info Control for tissue data callus Original data GEO bulk
233 npr1 sni1 brca2a 0.62 >More info 0.21 >More info npr1 sni1 water water seedling Original data GEO bulk
234 Col-0 (t-zeatin 3 h) 0.59 >More info 0.24 >More info Col-0 Original data Cytokinin treatment of seedlings
235 dor drought -0.22 >More info -0.61 >More info WT drought Original data GEO bulk
236 shoot-10 μM DEX- 12 hr -0.51 >More info -0.31 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
237 Red Light 45min -0.63 >More info -0.19 >More info White Light 45min Original data Light treatments
238 WT cold 0.66 >More info 0.16 >More info WT control All aerial tissue Original data GEO bulk
239 Var2-1 roots 2hr KNO3 nitrogen -0.63 >More info -0.19 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
240 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 0.27 >More info 0.55 >More info Control for tissue data Original data GEO bulk
241 axr2 0.58 >More info 0.24 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
242 unpollinated pistil 0.25 >More info 0.57 >More info Control for tissue data pistil Original data GEO bulk
243 silique 0.25 >More info 0.57 >More info Control for tissue data silique Original data GEO bulk
244 48 h S Attim 17-1 1 0.54 >More info 0.27 >More info 0 h Attim 17-1 1 seed Original data
245 Whole root - low pH 24H 0.52 >More info 0.29 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
246 GO5; 0h switch to ambient CO2 concentrations; 0.52 >More info 0.29 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
247 WT Root Hypoxia -0.61 >More info -0.20 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
248 60m light 0.53 >More info 0.28 >More info before light whole seedlings Original data GEO bulk
249 FLIGHT TAGESB plate6 SHOOTS -0.64 >More info -0.17 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
250 Shoot apex inflorescence (after bolting) 0.16 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
251 gun1-9 control 0.57 >More info 0.24 >More info Col-0 control Original data GEO bulk
252 NahG -0.08 >More info -0.73 >More info Col-0 Leaves Original data GEO bulk
253 35S:VND7-VP16-GR+DEX +CHX -0.56 >More info -0.24 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
254 Heat and anoxia -0.52 >More info -0.28 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
255 Col(gl) leaf 100mM NaCl -0.75 >More info -0.05 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
256 SAM SE 35S:AGL15 -0.50 >More info -0.30 >More info SAM SE Col Original data GEO bulk
257 anti-sense for AtAOX1a -0.68 >More info -0.12 >More info WT Original data GEO bulk
258 WT salt 12 h 0.66 >More info 0.14 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
259 camta1/2/3 warm -0.52 >More info -0.28 >More info WT warm entire aerial part Original data GEO bulk
260 Anoxia -0.56 >More info -0.24 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
261 MPK6 ox Shoot Hypoxia -0.65 >More info -0.15 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
262 Col(gl) 100mM NaCl -0.75 >More info -0.05 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
263 root epidermis and lateral root cap -S 0.53 >More info 0.27 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
264 48 h S WT 0.52 >More info 0.28 >More info 0 h WT seed Original data
265 FLIGHT TAGESB plate -0.51 >More info -0.29 >More info GROUND CONTROL TAGESB plate Original data
266 Shoot apex vegetative 0.19 >More info 0.61 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
267 seed during stratification 48 h S 0.28 >More info 0.52 >More info Control for tissue data seed Original data GEO bulk
268 Cells whole embryo 0.27 >More info 0.53 >More info Control for tissue data whole embryo Original data
269 gun5 norflurazon -0.59 >More info -0.21 >More info gun5 control Original data GEO bulk
270 bZIP1ko mutant N+Light- 0.57 >More info 0.23 >More info WT-sib N+Light- whole plant Original data GEO bulk
271 FAMA induced 48h 0.65 >More info 0.14 >More info control 48h Whole seedling Original data GEO bulk
272 Col-0 red light 0.51 >More info 0.28 >More info Col-0 dark Original data GEO bulk
273 miR mutant (higher order mutant) -0.50 >More info -0.29 >More info col control (higher order mutant) Original data GEO bulk
274 epfl4 epfl6 0.53 >More info 0.26 >More info WT developing inflorescence tips Original data GEO bulk
275 embryo proper 0.25 >More info 0.54 >More info Control for tissue data Original data GEO bulk
276 Ambient CO2 fully expanded leaf 0.17 >More info 0.62 >More info Control for tissue data fully expanded leaf Original data
277 det2 light-dark -0.58 >More info -0.21 >More info det2 light light-dark Original data GEO bulk
278 ein2 mutant roots IAA 0.71 >More info 0.08 >More info roots ethylene Original data GEO bulk
279 col-5 hrpA 12h -0.21 >More info -0.58 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
280 nbp35-3/- -0.72 >More info -0.06 >More info WT whole seedling Original data GEO bulk
281 msg2-BR 0.59 >More info 0.19 >More info BR BR dark-grown seedlings Original data GEO bulk
282 UV Stress 24 h (root) -0.61 >More info -0.17 >More info Stress mock 24 h (root) Original data Stress treatments
283 Root dark control 24h -0.71 >More info -0.07 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
284 lateral root cap-columella pBRN2 8h BL -0.55 >More info -0.23 >More info lateral root cap-columella pBRN2 0h BL brassinosteroid root Original data
285 16h Col-0 0.59 >More info 0.19 >More info 00h Col-0 Original data GEO bulk
286 cca1-lhy 15m light -0.56 >More info -0.22 >More info 15m light whole seedlings Original data GEO bulk
287 root callus inducing medium 96 h 0.62 >More info 0.16 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
288 Propiconazole 3 h 0.51 >More info 0.27 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
289 R. solani AG8 0.55 >More info 0.23 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
290 eto1-4 +303 -0.59 >More info -0.19 >More info eto1-4 whole seedling Original data GEO bulk
291 Root from tip to 130 mm proximal to tip (cut
8dpg)		 0.22 >More info 0.56 >More info Control for tissue data Original data GEO bulk
292 LAS 0.23 >More info 0.55 >More info Control for tissue data shoot apical meristem Original data GEO bulk
293 vip3 -0.59 >More info -0.18 >More info WT Original data GEO bulk
294 BI-1-1h IAA 0.66 >More info 0.11 >More info BI-1-0h IAA whole plant Original data GEO bulk
295 mbd4 mutant thaliana 10-day-old seedling -0.59 >More info -0.18 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
296 WT Na2S 0.50 >More info 0.27 >More info WT water Na2S leaf Original data GEO bulk
297 Time-0 chr11-1chr17-1 -0.51 >More info -0.26 >More info Time-0 Col-0 leaf explants Original data
298 efr-1 +elf18 10h 0.56 >More info 0.21 >More info WT +elf18 10h elf18 Original data GEO bulk
299 sfr6 control 0.65 >More info 0.12 >More info WT control All aerial tissue Original data GEO bulk
300 lec1-1 Mature Green Seed 0.22 >More info 0.55 >More info Control for tissue data Original data GEO bulk
301 torpedo-basal 0.23 >More info 0.54 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
302 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.22 >More info 0.55 >More info Control for tissue data Original data GEO bulk
303 04h Col-0 0.50 >More info 0.26 >More info 00h Col-0 Original data GEO bulk
304 R. solani AG2-1 0.53 >More info 0.23 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
305 4C 2h(SOIL) -0.60 >More info -0.16 >More info 4C 0h(SOIL) Original data GEO bulk
306 Col-O low light -0.63 >More info -0.13 >More info Col-O bule light Original data GEO bulk
307 shoot-10 μM DEX- 6 hr -0.53 >More info -0.23 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
308 WT zebularine 0.55 >More info 0.21 >More info WT mock shoot apical meristem Original data
309 WT powdery mildew 0.50 >More info 0.26 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
310 Differentiation 24h 0.80 >More info -0.04 >More info Differentiation 0h leaves Original data
311 Osmotic Stress 24 h (root) -0.62 >More info -0.14 >More info Stress mock 24 h (root) Original data Stress treatments
312 ex2 flu dark 8hours/30 minute light -0.20 >More info -0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
313 embryo proper heart stage 0.23 >More info 0.53 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
314 pif4pif5 high R/FR -0.51 >More info -0.24 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
315 Shoot submergence 7h -0.75 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
316 tfl1-1-23ºC -0.67 >More info -0.08 >More info WT-23ºC Original data GEO bulk
317 root stele 40 mM NaCls -0.50 >More info -0.25 >More info root stele Original data GEO bulk
318 Prohexadione 3 h -0.51 >More info -0.24 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
319 ABA 3h 0.55 >More info 0.20 >More info EtOH 3h 3hr Original data GEO bulk
320 HARAP hypoxic 0.57 >More info 0.18 >More info hypoxic hypoxia Original data GEO bulk
321 til1-1 22C -0.70 >More info -0.05 >More info Col-0 22C Original data GEO bulk
322 Wounding Stress3 h (shoot) 0.75 >More info 0.00 >More info Stress mock 3 h (shoot) Original data Stress treatments
323 SAB 0.60 >More info 0.15 >More info COL seedling Original data
324 sfr2 control 0.55 >More info 0.20 >More info WT control All aerial tissue Original data GEO bulk
325 whole seeds 0.21 >More info 0.54 >More info Control for tissue data Original data GEO bulk
326 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 0.22 >More info 0.53 >More info Control for tissue data Original data GEO bulk
327 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 0.22 >More info 0.53 >More info Control for tissue data Original data GEO bulk
328 HDG4 0.20 >More info 0.55 >More info Control for tissue data shoot apical meristem Original data GEO bulk
329 Atape2 low light 0.20 >More info 0.55 >More info Control for tissue data shoot apical meristem Original data GEO bulk
330 gapcp1gapcp2 0.52 >More info 0.22 >More info WT Original data GEO bulk
331 Cocultivation 8 hrs leaf -0.56 >More info -0.18 >More info Mock cocultivation 8 hrs leaf Leaf Original data
332 root cap pGL2 8h BL -0.65 >More info -0.09 >More info root cap pGL2 0h BL brassinosteroid root Original data
333 camta1 leaf water -0.54 >More info -0.20 >More info Col-0 leaf water leaf Original data GEO bulk
334 essp3/brm5 mutant 0.53 >More info 0.21 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
335 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.78 >More info -0.04 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
336 Laer MeJA 1h 0.52 >More info 0.22 >More info Laer Control leaf discs Original data GEO bulk
337 bri1-116 0.01 >More info 0.73 >More info Col seedling Original data GEO bulk
338 ahg2-1sid2-2 0.56 >More info 0.17 >More info WT (Col) control Original data GEO bulk
339 SIZ 0.56 >More info 0.17 >More info COL seedling Original data
340 A2hsfa1-ox in quadruple mutant 0.53 >More info 0.20 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
341 Mutant nph4-1_arf19-1 0.51 >More info 0.22 >More info Col Original data GEO bulk
342 rosette leaves fdh -0.58 >More info -0.15 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
343 abh1 -ABA 0.54 >More info 0.19 >More info Col-0 -ABA Original data GEO bulk
344 edr1 36 h powdery mildew -0.61 >More info -0.12 >More info Col-0 36 h powdery mildew Original data GEO bulk
345 ABA 3 h -0.50 >More info -0.23 >More info Mock 3 h Original data Basic hormone treatment of seedlings
346 pmr5 -0.64 >More info -0.09 >More info Col-0 rosette Original data GEO bulk
347 nia1nia2noa1-2 0.70 >More info 0.03 >More info Col-0 whole seedlings Original data GEO bulk
348 whole seeds mature green 0.22 >More info 0.51 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
349 Root from tip to 130 mm proximal to tip (cut
4dpg)		 0.19 >More info 0.54 >More info Control for tissue data Original data GEO bulk
350 sid2-2 9 hpi A. brassicicola -0.12 >More info -0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
351 Bud 0.17 >More info 0.55 >More info Control for tissue data pollen grains and tubes Original data
352 WUS-GR DEX -0.53 >More info -0.19 >More info Mock Dexamethasone Original data GEO bulk
353 phyB mutant 16C 4hrs -0.54 >More info -0.18 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
354 B.cinerea 18 h infection 0.62 >More info 0.10 >More info Mock 18 h Original data Botrytis cinerea infection
355 Botrytis cinerea 18h 0.62 >More info 0.10 >More info control 18h Original data GEO bulk
356 Bur-0-30min IAA 0.51 >More info 0.21 >More info Bur-0h IAA whole plant Original data GEO bulk
357 Shoot apex vegetative &Young leaves 0.11 >More info 0.61 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
358 Apex 14DAS 0.12 >More info 0.60 >More info Control for tissue data Original data GEO bulk
359 chl1-5 Nitrate 0.5h -0.54 >More info -0.17 >More info WT Nitrate 0.5h Original data GEO bulk
360 Root -K -0.55 >More info -0.16 >More info Control-root Original data GEO bulk
361 Root dark control 7h -0.69 >More info -0.02 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
362 ga1-3/brm-1 0.69 >More info 0.02 >More info wt shoots Original data GEO bulk
363 root hypoxia total -0.63 >More info -0.08 >More info root control total Original data GEO bulk
364 WT resupplied Pi 4h 0.78 >More info -0.07 >More info WT complete seedlings Original data
365 xyl-grown cell culture- 1h 1mM Fru 0.57 >More info 0.14 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
366 WT (Col-0) inflorescence well-watered day 10 -0.53 >More info -0.18 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
367 flu over-tAPX -0.19 >More info -0.52 >More info WT Col Original data GEO bulk
368 Col-0 low oxygen -0.19 >More info -0.52 >More info Col-0 Original data GEO bulk
369 peripheral endosperm mature green 0.21 >More info 0.50 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
370 K starvation (root) -0.55 >More info -0.15 >More info Ws (root) Original data GEO bulk
371 cov1 cov2 stem Top 0.66 >More info 0.04 >More info WT stem Top stem Top Original data GEO bulk
372 flowers 0.14 >More info 0.56 >More info Control for tissue data Original data GEO bulk
373 in vivo pollen tube 0.17 >More info 0.53 >More info Control for tissue data pollen tube Original data GEO bulk
374 NAA 3h 0.74 >More info -0.04 >More info before treatment NAA root Original data GEO bulk
375 35S::HRE2 Aerobic -0.64 >More info -0.06 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
376 bak1-3 +Pep2 10h -0.52 >More info -0.18 >More info WT +Pep2 10h Pep2 Original data GEO bulk
377 seedling 3h after HZE WT -0.72 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
378 COL-0-Fe--root 0.60 >More info 0.10 >More info COL-0-Ctrl--root root Original data
379 Col-0 mbs1-1 HL 0h 0.61 >More info 0.09 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
380 tcp14 -0.62 >More info -0.08 >More info WT inflorescences Original data GEO bulk
381 aintegumenta-1 0.62 >More info 0.08 >More info Col-0 Original data GEO bulk
382 Hypocotyl 0.12 >More info 0.58 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
383 seed coat heart stage 0.19 >More info 0.51 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
384 Inflorescence ngaquad 0.66 >More info 0.03 >More info Inflorescence wt Original data GEO bulk
385 whole roots 140 mM NaCl 1 hour -0.55 >More info -0.14 >More info whole roots standard Original data GEO bulk
386 0.2µM SMX 0.54 >More info 0.15 >More info control Whole seedling Original data GEO bulk
387 NaCl scm 0.52 >More info 0.17 >More info NaCl Col Original data GEO bulk
388 9 hr Hypoxia Total RNA -0.55 >More info -0.14 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
389 aphid infested -0.56 >More info -0.13 >More info control aphid infested Leaves Original data GEO bulk
390 gai Flg22 2h -0.55 >More info -0.14 >More info Laer Flg22 2h leaf discs Original data GEO bulk
391 aphid infested -0.56 >More info -0.13 >More info CTR Original data GEO bulk
392 Tsu -Fe 48h Shoots 0.52 >More info 0.17 >More info Tsu +Fe 24h Shoots Original data GEO bulk
393 S17 0.14 >More info 0.55 >More info Control for tissue data shoot apical meristem Original data GEO bulk
394 M6PR transgenic 0mM NaCl -0.51 >More info -0.18 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
395 ALC Toc1 light-light EtOH -0.70 >More info 0.01 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
396 lib 0.59 >More info 0.10 >More info WT whole seedling Original data GEO bulk
397 MPK6 ox Root Hypoxia -0.61 >More info -0.08 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
398 4C 1h -0.63 >More info -0.06 >More info 4C 0h Original data GEO bulk
399 BR 0.57 >More info 0.12 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
400 ML (Mature leaves) 35DAS 0.10 >More info 0.59 >More info Control for tissue data Original data GEO bulk
401 micropylar endosperm mature green 0.18 >More info 0.51 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
402 DMTU 0.68 >More info -0.00 >More info control Original data GEO bulk
403 lateral root cap-columella pBRN2 3h BL -0.63 >More info -0.05 >More info lateral root cap-columella pBRN2 0h BL brassinosteroid root Original data
404 mbd6 mutant thaliana 10-day-old seedling -0.55 >More info -0.13 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
405 npr1 sni1 ssn2 0.63 >More info 0.05 >More info npr1 sni1 water water seedling Original data GEO bulk
406 seedling mSPL13 -0.54 >More info -0.14 >More info seedling Col-0 Original data GEO bulk
407 root callus inducing medium 48 h 0.64 >More info 0.04 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
408 lec1-1 Post-Mature Green Seed 0.16 >More info 0.52 >More info Control for tissue data Original data GEO bulk
409 whole seeds heart stage 0.13 >More info 0.55 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
410 KAN1 0.12 >More info 0.56 >More info Control for tissue data shoot apical meristem Original data GEO bulk
411 MYB29 OE 0.59 >More info 0.09 >More info WT for MYB29/76 Original data GEO bulk
412 cngc4 -0.57 >More info -0.11 >More info Ws-2 Seedlings Original data GEO bulk
413 camta1 root water -0.50 >More info -0.18 >More info Col-0 root water root Original data GEO bulk
414 Nuclei proembryo 0.18 >More info 0.50 >More info Control for tissue data proembryo Original data
415 ms35 silique stage 9.10 0.76 >More info -0.09 >More info Ler 8.9.10 anther and filament Original data GEO bulk
416 cdkf:1-2 0.67 >More info -0.00 >More info wt seedling young seedlings Original data GEO bulk
417 hog1-7 0.62 >More info 0.05 >More info wt whole seedling Original data GEO bulk
418 C58 6dpi 0.56 >More info 0.11 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
419 mutant-line774 0.62 >More info 0.05 >More info WT-control whole plant Original data GEO bulk
420 35S::HRE1 Hypoxic -0.58 >More info -0.09 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
421 roots bhlh100/101 0uM Fe -0.59 >More info -0.08 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
422 Glyphosate EC50 0.70 >More info -0.03 >More info Carrier (Glyphosate) Original data GEO bulk
423 EL (leaves 1-2) 14DAS 0.08 >More info 0.59 >More info Control for tissue data Original data GEO bulk
424 Control KNO3 roots - 8hours -0.50 >More info -0.16 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
425 polysome mRNA eif3k 0.51 >More info 0.15 >More info polysome mRNA WT aerial part Original data GEO bulk
426 scl3 0.52 >More info 0.14 >More info Col-0 whole root Original data GEO bulk
427 Seeds stage3 with siliques 0.11 >More info 0.55 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
428 flu -0.16 >More info -0.50 >More info WT Col Original data GEO bulk
429 flower-buds 0.12 >More info 0.54 >More info Control for tissue data Original data GEO bulk
430 ovule 0.12 >More info 0.54 >More info Control for tissue data ovule Original data GEO bulk
431 naxillin 3h 0.69 >More info -0.03 >More info before treatment naxillin root Original data GEO bulk
432 ein2-1 +elf18 2h 0.58 >More info 0.08 >More info WT +elf18 2h elf18 Original data GEO bulk
433 ein2 mutant roots mock 0.58 >More info 0.08 >More info roots mock Original data GEO bulk
434 Laer pretreat JA Flg22 0h -0.06 >More info -0.60 >More info Laer pretreat water control leaf discs Original data GEO bulk
435 Imidazolinone EC50 0.55 >More info 0.10 >More info Carrier (Imidazolinone) Original data GEO bulk
436 mil4 -0.55 >More info -0.10 >More info Col rosettes Original data GEO bulk
437 HARAP aerobic 0.55 >More info 0.10 >More info WT aerobic aerobic Original data GEO bulk
438 Differentiation 36h 0.74 >More info -0.09 >More info Differentiation 0h leaves Original data
439 35S::HRE2 Hypoxic -0.65 >More info -0.00 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
440 gun1gun5 far-red pretreated -0.65 >More info -0.00 >More info WT far-red pretreated Original data GEO bulk
441 tZ 0.51 >More info 0.14 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
442 axr2-BR 0.54 >More info 0.11 >More info BR BR dark-grown seedlings Original data GEO bulk
443 over-tAPX 0.02 >More info 0.63 >More info WT Col Original data GEO bulk
444 Col-0 9 hpi A. brassicicola -0.12 >More info -0.53 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
445 E.coli 0157 H7 7h -0.07 >More info -0.58 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
446 Bay-0-3h IAA -0.62 >More info -0.02 >More info Bay-0-0h IAA whole plant Original data GEO bulk
447 Col-0 low oxygen -0.61 >More info -0.03 >More info Col-0 control low oxygen root Original data GEO bulk
448 AtMinD1 Prolonged-induction -0.59 >More info -0.05 >More info Control whole plant Original data GEO bulk
449 Mutant arf19-1 0.53 >More info 0.11 >More info Col Original data GEO bulk
450 Differentiation 12h 0.75 >More info -0.11 >More info Differentiation 0h leaves Original data
451 IPT8 mutant tZ 12h -0.59 >More info -0.05 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
452 proline 0.50 >More info 0.14 >More info noneHS Original data GEO bulk
453 IAA Treated 0.66 >More info -0.02 >More info Negative Control Original data GEO bulk
454 oligomycin 1 h -0.63 >More info -0.01 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
455 Proximalhalf (leaf7) 0.03 >More info 0.61 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
456 nia1nia2 0.69 >More info -0.05 >More info Col-0 whole seedlings Original data GEO bulk
457 fus3-3 8 DAF Seed 0.56 >More info 0.07 >More info WT (Col-0) 8 DAF Seed developing seeds dissected from sliques Original data
458 oas-a1.1 Cd 24h 0.63 >More info 0.00 >More info Cd 24h root Shoot Original data GEO bulk
459 Col-0-1h IAA 0.61 >More info 0.02 >More info Col-0-0h IAA whole plant Original data GEO bulk
460 bam7 untreated 0.50 >More info 0.13 >More info WT untreated none shoot Original data
461 roottip hypoxia total -0.61 >More info -0.02 >More info roottip control total Original data GEO bulk
462 amiR-tor induced 6d 0.59 >More info 0.04 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
463 8h-DC3000 avrRpm1 -0.50 >More info -0.13 >More info 8h-DC3000 leaves Original data GEO bulk
464 Apex mir-319b 17DAS 0.68 >More info -0.05 >More info Apex Col 14DAS Original data GEO bulk
465 Petiol (leaf7) 0.02 >More info 0.61 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
466 Stem 1st node 0.04 >More info 0.59 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
467 Heat shock optimum -0.02 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
468 HMG 0.12 >More info 0.51 >More info Control for tissue data shoot apical meristem Original data GEO bulk
469 AtHB8 0.11 >More info 0.52 >More info Control for tissue data shoot apical meristem Original data GEO bulk
470 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.04 >More info -0.59 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
471 ein3 eil1 JA 0.55 >More info 0.07 >More info JA Whole seedling Original data GEO bulk
472 R. amphibia submerged -0.53 >More info -0.09 >More info R. amphibia air Original data GEO bulk
473 Apex 5DAS 0.04 >More info 0.58 >More info Control for tissue data Original data GEO bulk
474 Ibuprofen 3 h 0.54 >More info 0.07 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
475 Elevated CO2 fully expanded leaf 0.53 >More info 0.08 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
476 brm-1 0.52 >More info 0.09 >More info wt shoots Original data GEO bulk
477 whole roots 140 mM NaCl 32 hour -0.52 >More info -0.09 >More info whole roots standard Original data GEO bulk
478 root callus inducing medium 24h 0.63 >More info -0.02 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
479 Blue Light 45 min -0.08 >More info -0.53 >More info White Light 45min Original data Light treatments
480 lec1-1 Globular Stage Seed 0.08 >More info 0.53 >More info Control for tissue data Original data GEO bulk
481 atgsnor1-3-avrB-6h -0.09 >More info -0.52 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
482 stele pSHR 3h BL -0.54 >More info -0.06 >More info stele pSHR 0h BL brassinosteroid root Original data
483 Bay-0-30min IAA -0.62 >More info 0.02 >More info Bay-0-0h IAA whole plant Original data GEO bulk
484 arr10 arr12 0.60 >More info -0.00 >More info DMSO--WT DMSO roots Original data GEO bulk
485 Sha-30min IAA -0.63 >More info 0.03 >More info Sha-0h IAA whole plant Original data GEO bulk
486 Pedicels stage15 0.01 >More info 0.59 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
487 camta1 root drought -0.55 >More info -0.04 >More info Col-0 root drought root Original data GEO bulk
488 Leaf GLU1-KO 0.67 >More info -0.08 >More info Leaf Col(0) rosette leaves Original data GEO bulk
489 pepr1-1 Pepr2-3 untreated 0.56 >More info 0.03 >More info WT untreated untreated Original data GEO bulk
490 iron minus 0 h -0.61 >More info 0.02 >More info iron +0 h root Original data GEO bulk
491 estradiole-induced ANAC092 0.50 >More info 0.09 >More info transgenic (empty vector inducible system) Original data GEO bulk
492 Dark 2day ivd -0.58 >More info -0.01 >More info 0h ivd Original data
493 atsf1-2 mutant seedling 0.64 >More info -0.05 >More info Col-0 seedling seedlings Original data
494 mutant acs2B (single mutant) 0.59 >More info 0.00 >More info col control (single mutant) Original data GEO bulk
495 Rosette leaf No2 -0.01 >More info 0.60 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
496 wrky33 mock 0.65 >More info -0.07 >More info WT mock 14 hour mock control leaves Original data
497 peripheral endosperm heart stage 0.05 >More info 0.53 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
498 ara1/2mut 0.50 >More info 0.08 >More info Col-3 Original data GEO bulk
499 Heat no recovery 0.61 >More info -0.03 >More info Mock no recovery seedling Original data GEO bulk
500 sfr2 cold -0.50 >More info -0.08 >More info WT cold All aerial tissue Original data GEO bulk
501 Mature roots 0.08 >More info 0.50 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
502 Emwa1 inoculated psk 3 dpi -0.01 >More info 0.59 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
503 ahg2-1 0.50 >More info 0.07 >More info WT (Col) control Original data GEO bulk
504 cop1 Seedling BL+ABA 0.53 >More info 0.04 >More info WT Seedling BL+ABA Original data GEO bulk
505 t-zeatin 3 h 0.51 >More info 0.06 >More info Mock 3 h Original data Basic hormone treatment of seedlings
506 PAHs stress 0.63 >More info -0.06 >More info exp control phenanthrene whole plants Original data GEO bulk
507 eds16 laser microdissected 5 dpi -0.06 >More info -0.51 >More info Col laser microdissected 5 dpi LMD leaf epidermal and mesophyll cells Original data GEO bulk
508 Section Root from70 mm to 340 mm harvested
immediately		 0.02 >More info 0.55 >More info Control for tissue data Original data GEO bulk
509 Col-0 low R/FR 0.61 >More info -0.04 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
510 Flowers stage15 -0.00 >More info 0.57 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
511 AtMinD1 Temporal-induction -0.53 >More info -0.03 >More info Control whole plant Original data GEO bulk
512 etiolated cop1 0.52 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
513 anac017-1 AntimycinA 3h -0.56 >More info -0.00 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
514 tcp13 -0.73 >More info 0.17 >More info WT inflorescences Original data GEO bulk
515 Distal half (leaf7) -0.04 >More info 0.60 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
516 Salt Stress 24 h (shoot) 0.50 >More info 0.05 >More info Stress mock 24 h (shoot) Original data Stress treatments
517 elevated CO2 normal Mg root 0.51 >More info 0.04 >More info atmospheric CO2 normal Mg root Root Original data
518 SPT4-R3 seedlings0 DAS 0.54 >More info 0.01 >More info Col-0 seedlings0 DAS seedlings Original data
519 roottip control pWOL -0.53 >More info -0.02 >More info roottip control total control roottip Original data GEO bulk
520 Bur-0-1h IAA 0.55 >More info 0.00 >More info Bur-0h IAA whole plant Original data GEO bulk
521 micropylar endosperm heart stage 0.04 >More info 0.51 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
522 afb3-1 2h KNO3 -0.06 >More info 0.61 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
523 root - 08% oxygen - 2h -0.01 >More info -0.53 >More info root - 21% oxygen - 2h Original data GEO bulk
524 cortex 0.02 >More info 0.52 >More info Control for tissue data cortex Original data GEO bulk
525 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
526 treated group 0.59 >More info -0.05 >More info Control group Original data
527 WT-Dry 0.59 >More info -0.05 >More info WT-CK dehydration treatment 1h Original data
528 2xX6x interploidy cross 0.58 >More info -0.04 >More info 2xX2x cross Original data GEO bulk
529 Differentiation 48h 0.69 >More info -0.15 >More info Differentiation 0h leaves Original data
530 pskr1-5 -0.04 >More info 0.58 >More info wild type Cotyledons Original data GEO bulk
531 Selenate (root) 0.60 >More info -0.07 >More info Ws (root) Original data GEO bulk
532 Root Selenate 0.60 >More info -0.07 >More info Root control 40 micromolar selenate Root Original data GEO bulk
533 BI-1-3h IAA 0.54 >More info -0.01 >More info BI-1-0h IAA whole plant Original data GEO bulk
534 Col leaves 120h LT 0.59 >More info -0.06 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
535 2xX4x interploidy cross 0.64 >More info -0.11 >More info 2xX2x cross Original data GEO bulk
536 SHR-GR Time 6H Dex 0.68 >More info -0.15 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
537 Cotyledons -0.06 >More info 0.59 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
538 col 24h4c set4 0.58 >More info -0.05 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
539 E.coli TUV86 2 fliC 7h 0.05 >More info -0.58 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
540 root callus inducing medium 12 h 0.52 >More info 0.00 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
541 piffq FR 1h 0.51 >More info 0.01 >More info WT FR 1h whole seedling Original data GEO bulk
542 BI-1-30min IAA 0.56 >More info -0.04 >More info BI-1-0h IAA whole plant Original data GEO bulk
543 Flagellin 4 h (leaf) -0.01 >More info -0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
544 Constans-mutant 0.00 >More info 0.52 >More info Col control above-ground whole plant Original data GEO bulk
545 Oxidative Stress 3 h (root) -0.57 >More info 0.05 >More info Stress mock 3 h (root) Original data Stress treatments
546 Pst-DC3000(hrpA)-4hpi 0.05 >More info -0.57 >More info Pst-DC3000-4hpi Original data GEO bulk
547 Apex BLS>>TCP4 14DAS 0.51 >More info 0.00 >More info Apex Col 14DAS Original data GEO bulk
548 Col-0 2h NAA 0.63 >More info -0.12 >More info Col-0 6h MOCK Original data GEO bulk
549 dsr1 -0.59 >More info 0.08 >More info WT mock Whole seedling Original data GEO bulk
550 Mutant nph4-1 0.52 >More info -0.01 >More info Col Original data GEO bulk
551 ms1 unpollinated -0.63 >More info 0.13 >More info WT 8h-pollinated pistil Original data GEO bulk
552 rrd1 IBA 0.64 >More info -0.14 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
553 Full C2 T1 0.52 >More info -0.02 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
554 HSP90 Reduced RNAi-A1 -0.54 >More info 0.04 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
555 lec1-1 Cotyledon Stage Seed -0.01 >More info 0.51 >More info Control for tissue data Original data GEO bulk
556 chalazal seed coat -0.00 >More info 0.50 >More info Control for tissue data Original data GEO bulk
557 Inflorescence miR-NGA 0.57 >More info -0.07 >More info Inflorescence wt Original data GEO bulk
558 Ovary 0.58 >More info -0.08 >More info Seedling Original data GEO bulk
559 Senescing leaf -0.07 >More info 0.57 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
560 intact root auxin 0.56 >More info -0.07 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
561 long 10-degree- 0.55 >More info -0.06 >More info control long Original data GEO bulk
562 SHR-GR Time 12H Dex 0.53 >More info -0.04 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
563 lateral nectary stage 11-12 -0.06 >More info 0.55 >More info Control for tissue data lateral nectaries Original data GEO bulk
564 pvip1 pvip2 seedling 0.51 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
565 Laer pretreat GA Flg22 0h 0.03 >More info -0.52 >More info Laer pretreat water control leaf discs Original data GEO bulk
566 Mutant iaa5_6_19 0.54 >More info -0.06 >More info Col Original data GEO bulk
567 pab polysome 0.51 >More info -0.03 >More info WT polysome seedling shoot/aerial seedling Original data
568 mutant-line1135 0.51 >More info -0.03 >More info WT-control whole plant Original data GEO bulk
569 ddm1-12 0.51 >More info -0.03 >More info wt whole seedling Original data GEO bulk
570 Sepals stage15 -0.09 >More info 0.56 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
571 seedling 24h after HZE atm-1 -0.54 >More info 0.07 >More info seedling day 2 unirradiated atm-1 24h Original data
572 WT 90-105 min Xanthomonas 0.52 >More info -0.05 >More info WT T0 Original data GEO bulk
573 rsa3-1 Na 24h -0.06 >More info 0.53 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
574 IRP1-OE-Ctrl--root 0.64 >More info -0.17 >More info COL-0-Ctrl--root root Original data
575 penta Alternaria 3dpi 0.10 >More info -0.56 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
576 gpa1 +ABA LF -0.53 >More info 0.07 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
577 -Sulfate 2 h 0.50 >More info -0.04 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
578 Phaseolicola 2 h (leaf) 0.04 >More info -0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
579 bam8 untreated 0.58 >More info -0.12 >More info WT untreated none shoot Original data
580 shoot hypoxia pSUC2 0.57 >More info -0.11 >More info shoot hypoxia total Original data GEO bulk
581 tfl1-1-16ºC -0.56 >More info 0.11 >More info WT-16ºC Original data GEO bulk
582 Mutant iaa5_6_19(IAA) 0.51 >More info -0.06 >More info Col (IAA) Original data GEO bulk
583 rao2 H2O2 3h -0.64 >More info 0.19 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
584 Laer pretreat GA Flg22 1h -0.26 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
585 phyABCDE Dark 0.57 >More info -0.13 >More info WT Dark Dark whole seedling Original data GEO bulk
586 opr3 OPDA 22 h -0.55 >More info 0.12 >More info opr3 0 h Original data GEO bulk
587 Col leaves 48h LT 0.56 >More info -0.13 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
588 atmyc2 Seedling BL -0.61 >More info 0.18 >More info WT Seedling BL Original data GEO bulk
589 WT no Pi 0.57 >More info -0.14 >More info WT complete seedlings Original data
590 Cauline leaves -0.17 >More info 0.60 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
591 long 8-degree- 0.52 >More info -0.10 >More info control long Original data GEO bulk
592 Stigma 0.51 >More info -0.09 >More info Seedling Original data GEO bulk
593 median nectary stage 14-15 -0.10 >More info 0.52 >More info Control for tissue data median nectaries Original data GEO bulk
594 current injection 0.50 >More info -0.08 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
595 ddm1-2 0.50 >More info -0.09 >More info Col-0 plant inflorescence Original data
596 Expanding leaf -0.16 >More info 0.57 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
597 endosperm ABA 0.53 >More info -0.13 >More info endosperm-control ABA endosperm Original data GEO bulk
598 lateral nectary stage 14-15 -0.11 >More info 0.51 >More info Control for tissue data lateral nectaries Original data GEO bulk
599 Mutant bri1 -0.58 >More info 0.18 >More info Ws-2 Original data Comparison of plant hormone related mutant
600 JMJ24 knockout 0.64 >More info -0.25 >More info WT Original data GEO bulk
601 entire vegetative rosette -0.60 >More info 0.21 >More info Col-0 Mock WL entire vegetative rosette Original data
602 elf3-7-23ºC 0.52 >More info -0.13 >More info WT-23ºC Original data GEO bulk
603 DC3000 2 h (leaf) 0.12 >More info -0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
604 IAA7mII over-expressor IAA Treated -0.31 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
605 Stem 2ndinternode -0.19 >More info 0.56 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
606 phyB Dark -0.53 >More info 0.16 >More info WT(Ler) Dark Original data GEO bulk
607 aerial organ callus inducing medium 96 h 0.13 >More info -0.50 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
608 wt systemic wounding 0.55 >More info -0.19 >More info wt control leaves Original data GEO bulk
609 35S-MIF1 dark grown 0.63 >More info -0.27 >More info Dark-grown WT control Original data GEO bulk
610 low water potential 0.58 >More info -0.22 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
611 46T-Dry -0.61 >More info 0.26 >More info WT-Dry dehydration treatment 1h Original data
612 rcf1-1 cold 12h 0.50 >More info -0.15 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
613 46T-CK -0.55 >More info 0.21 >More info WT-CK none Original data
614 lec1-1 24h post-fertilization Seed -0.18 >More info 0.52 >More info Control for tissue data Original data GEO bulk
615 OE WRKY63.3 high light -0.60 >More info 0.26 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
616 hrpA 7h 0.22 >More info -0.55 >More info Mock 7h hrpA Original data GEO bulk
617 Col BTH -0.34 >More info 0.67 >More info Col rosettes Original data GEO bulk
618 eif3h polysome 0.60 >More info -0.27 >More info WT polysome Original data GEO bulk
619 wavy -0.54 >More info 0.22 >More info WT Original data GEO bulk
620 phr1 phl1 Root-Pi 0.28 >More info -0.60 >More info WT Shoot+Pi roots Original data GEO bulk
621 sta1 0.56 >More info -0.25 >More info WT Original data GEO bulk
622 ice1 3H Cold 0.54 >More info -0.24 >More info WT 3H Cold Original data GEO bulk
623 vtc2-1 0.57 >More info -0.27 >More info Col-0 whole plant Original data GEO bulk
624 seedling SPL13 -0.55 >More info 0.26 >More info seedling Col-0 Original data GEO bulk
625 pGL1::GL1-GR Dex 24hours -0.51 >More info 0.22 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
626 Petals stage15 -0.24 >More info 0.53 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
627 Leafminer damaged seedlings -0.27 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
628 col-5 hrpA 2h 0.28 >More info -0.57 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
629 low R/FR mock spray 0.55 >More info -0.27 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
630 Apex octa 18DAS 0.52 >More info -0.24 >More info Apex Col 14DAS Original data GEO bulk
631 CAX1/CAX3 mutant -0.57 >More info 0.29 >More info Col whole plant Original data GEO bulk
632 INA -0.32 >More info 0.60 >More info CK INA seedling Original data
633 35S:VND7-VP16-GR+CHX 0.53 >More info -0.26 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
634 eif3h 0.52 >More info -0.26 >More info WT Original data GEO bulk
635 glk1 glk2 GLK1-GR +DEX 4h -0.59 >More info 0.34 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
636 eif3h non-polysome 0.56 >More info -0.32 >More info WT non-polysome Original data GEO bulk
637 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.50 >More info 0.26 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
638 agb1 gpa1 +ABA LF -0.52 >More info 0.29 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
639 Full AC2 T2 0.50 >More info -0.27 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
640 WR 35S 3h BL -0.52 >More info 0.30 >More info WR 35S 0h BL brassinosteroid root Original data
641 col-5 DC3000-avrRpm 4h 0.37 >More info -0.58 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
642 siliques AtHb1 control -0.33 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
643 Col0-PsmES4326-24hpi -0.44 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
644 Leaf -0.40 >More info 0.53 >More info Control for tissue data leaf Original data GEO bulk
645 col-5 DC3000 4h 0.46 >More info -0.58 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
646 AsAKiin11 T1 0.41 >More info -0.51 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
647 phr1 Shoot-Pi -0.53 >More info 0.54 >More info WT Root-Pi shoots Original data GEO bulk