4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on flu over-tAPX
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List of experiments correlated with "flu over-tAPX"  Help Download transcriptome of top 30
Score Experiment Correlation from
flu over-tAPX		 Correlation to
flu over-tAPX		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 flu over-tAPX 1.00 >More info 1.00 >More info WT Col Original data GEO bulk
2 flu 0.95 >More info 0.94 >More info WT Col Original data GEO bulk
3 anac017-2 AntimycinA 3h -0.83 >More info -0.79 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
4 ataf1-1 mutant Col-0 Bgh inoculated 0.81 >More info 0.81 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
5 WT Col-0 Bgh inoculated 0.80 >More info 0.81 >More info WT Col-0 Un-inoculated Original data GEO bulk
6 WT AntimycinA 3h 0.81 >More info 0.79 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
7 rosette Light Wounded 0.80 >More info 0.79 >More info rosette Light Control Original data GEO bulk
8 AvrRpt2 Col-0 6hpi 0.83 >More info 0.76 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
9 GST NPP1 4 h (leaf) 0.81 >More info 0.77 >More info Mock 4 h (leaf) Original data Elicitor treatments
10 Col-0 9 hpi A. brassicicola 0.81 >More info 0.77 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
11 WT flg22 2h 0.79 >More info 0.79 >More info WT 0h Leaf tissue Original data GEO bulk
12 HopZ1a treated 0.78 >More info 0.80 >More info col Original data GEO bulk
13 Botrytis cinerea 48h 0.82 >More info 0.75 >More info control 48h Original data GEO bulk
14 IMI 4mM 0.82 >More info 0.75 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
15 rosette Dark Wounded 0.77 >More info 0.78 >More info rosette Dark Control Original data GEO bulk
16 hrcC 0.78 >More info 0.77 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
17 Flagellin 4 h (leaf) 0.81 >More info 0.74 >More info Mock 4 h (leaf) Original data Elicitor treatments
18 hrpA 7h 0.78 >More info 0.77 >More info Mock 7h hrpA Original data GEO bulk
19 Col-Luc WT 3h antimycin A 0.79 >More info 0.76 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
20 B.cinerea 18 h infection 0.78 >More info 0.77 >More info Mock 18 h Original data Botrytis cinerea infection
21 Botrytis cinerea 18h 0.78 >More info 0.77 >More info control 18h Original data GEO bulk
22 Seedling KUA1-IOX est 0.72 >More info 0.82 >More info Seedling KUA1-IOX mock Original data
23 Pst-DC3000(avrRpm1)-4hpi 0.75 >More info 0.79 >More info Pst-DC3000-4hpi Original data GEO bulk
24 HopZ1a treated ulp1c ulp1d 0.77 >More info 0.77 >More info col Original data GEO bulk
25 Fenclorim 4hr 0.78 >More info 0.76 >More info Acetone 4hr root Original data GEO bulk
26 col-5 hrpA 12h 0.75 >More info 0.79 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
27 col-5 DC3000 12h 0.75 >More info 0.79 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
28 ein2-1 9 hpi A. brassicicola 0.79 >More info 0.74 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
29 Cor 10h 0.77 >More info 0.76 >More info Mock 10h Cor Original data GEO bulk
30 Col-0-avrB-6h 0.77 >More info 0.76 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
31 CMP 4hr 0.78 >More info 0.74 >More info Acetone 4hr root Original data GEO bulk
32 35S:RPS4 eds1-2 8h -0.80 >More info -0.72 >More info 35S:RPS4 8h leaves Original data
33 sid2-2 9 hpi A. brassicicola 0.78 >More info 0.74 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
34 Phaseolicola 2 h (leaf) 0.77 >More info 0.74 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
35 Leafminer locally damaged thaliana seedlings 0.74 >More info 0.77 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
36 pepr1-1 Pepr2-3 +Pep2 2h -0.77 >More info -0.74 >More info WT +Pep2 2h Pep2 Original data GEO bulk
37 hrpA fliC 7h 0.79 >More info 0.72 >More info Mock 7h hrpA fliC Original data GEO bulk
38 leaf13 0.71 >More info 0.80 >More info unwounded leaves none Original data GEO bulk
39 Sulfometuron EC50 0.79 >More info 0.72 >More info Carrier Original data GEO bulk
40 Col-0 under 4 days salt 0.82 >More info 0.69 >More info Col-0 under control 4 days salt treatment rosette Original data
41 DFPM 0.79 >More info 0.71 >More info control Original data GEO bulk
42 +1.6 mM Tween 20 1 h. 0.76 >More info 0.74 >More info +distilled water 1 h. Original data GEO bulk
43 Col ozone 3h 0.72 >More info 0.78 >More info Col clean-air 3h ozone Original data GEO bulk
44 DC3000 24h 0.77 >More info 0.73 >More info Mock 24h DC3000 Original data GEO bulk
45 Shoot -Cs 0.68 >More info 0.81 >More info Control-shoot Original data GEO bulk
46 col-5 DC3000-avrRpm 4h 0.74 >More info 0.75 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
47 Laer treat paclobutrazol (PAC) 0.75 >More info 0.74 >More info Laer Control leaf discs Original data GEO bulk
48 Laer Flg22 1h 0.76 >More info 0.72 >More info Laer Control leaf discs Original data GEO bulk
49 WT+H2O2 0.71 >More info 0.77 >More info WT H2O2 Original data GEO bulk
50 seedlings protease IV 0.72 >More info 0.76 >More info seedlings nontreated control whole seedling Original data
51 35S::PI ap3-3 35S::AP-GR +DEX 0.65 >More info 0.83 >More info 0hr DEX Original data GEO bulk
52 ulp1c ulp1d +Pto 0.73 >More info 0.75 >More info ulp1c ulp1d mock Original data GEO bulk
53 Laer Flg22 2h 0.77 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
54 Wounding Stress3 h (shoot) 0.74 >More info 0.74 >More info Stress mock 3 h (shoot) Original data Stress treatments
55 35S:RPS4 eds1-2 24h -0.78 >More info -0.69 >More info 35S:RPS4 24h leaves Original data
56 WT NAA/flg 1h 0.75 >More info 0.72 >More info WT 0h Leaf tissue Original data GEO bulk
57 Laer Flg22+GA 1h 0.74 >More info 0.73 >More info Laer Control leaf discs Original data GEO bulk
58 GST 4 h (leaf) 0.73 >More info 0.74 >More info Mock 4 h (leaf) Original data Elicitor treatments
59 Osmotic Stress 24 h (shoot) 0.77 >More info 0.69 >More info Stress mock 24 h (shoot) Original data Stress treatments
60 WT 2-4h Xanthomonas 0.73 >More info 0.73 >More info WT T0 Original data GEO bulk
61 Laer Flg22+GA 2h 0.76 >More info 0.70 >More info Laer Control leaf discs Original data GEO bulk
62 Col-0 flu HL 3h 0.74 >More info 0.72 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
63 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.84 >More info 0.62 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
64 Te ozone 0.84 >More info 0.62 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
65 CMP 24hr 0.76 >More info 0.70 >More info Acetone 24hr root Original data GEO bulk
66 DC3000 7h 0.68 >More info 0.77 >More info Mock 7h DC3000 Original data GEO bulk
67 ceh1 mutant 0.78 >More info 0.67 >More info Parent line Original data
68 ice1 control 0.72 >More info 0.73 >More info WT control Original data GEO bulk
69 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.83 >More info 0.62 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
70 Cycloheximide 3 h 0.74 >More info 0.71 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
71 WT flg22 1h 0.72 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
72 WT seedlings MV 0.74 >More info 0.70 >More info WT seedlings control Seedlings Original data GEO bulk
73 oligomycin 4 h 0.75 >More info 0.69 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
74 shoots bhlh100/101 0uM Fe 0.78 >More info 0.66 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
75 gai Control 0.78 >More info 0.66 >More info Laer Control leaf discs Original data GEO bulk
76 Col0-PsmES4326-24hpi 0.83 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
77 Lipopolysaccaride4 h (leaf) 0.78 >More info 0.66 >More info Mock 4 h (leaf) Original data Elicitor treatments
78 E.coli TUV86 2 fliC 7h 0.75 >More info 0.68 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
79 cpr5scv1 0.78 >More info 0.65 >More info WT(COL) Original data GEO bulk
80 Methyl Jasmonate 1 h 0.64 >More info 0.79 >More info Mock 1 h Original data Basic hormone treatment of seedlings
81 Laer pretreat JA Flg22 1h 0.73 >More info 0.70 >More info Laer pretreat water control leaf discs Original data GEO bulk
82 Col-0 ozone 0.83 >More info 0.60 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
83 gun1gun5 far-red pretreated -0.71 >More info -0.72 >More info WT far-red pretreated Original data GEO bulk
84 coi1-16 ein2 sid2 ctrl -0.82 >More info -0.61 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
85 npr1-1 SA -0.76 >More info -0.66 >More info Col-0 SA complete seedling Original data
86 Laer pretreat GA+JA Flg22 0h 0.75 >More info 0.67 >More info Laer pretreat water control leaf discs Original data GEO bulk
87 CT101 ozone 0.83 >More info 0.59 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
88 WT H2O2 3h 0.69 >More info 0.73 >More info WT water 3h 3h_H2O2 Original data GEO bulk
89 efr-1 +elf18 10h -0.71 >More info -0.71 >More info WT +elf18 10h elf18 Original data GEO bulk
90 AgNO3 3 h 0.77 >More info 0.65 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
91 Col-0 C2H4 24h 0.74 >More info 0.68 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
92 Col whole leaf 5dpi 0.70 >More info 0.72 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
93 miR393 flg22 1h 0.66 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
94 gh3.5-1D 48 hpi 0.75 >More info 0.66 >More info Col-0 uninoculated Original data GEO bulk
95 safener treated 0.73 >More info 0.68 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
96 penta Alternaria 3dpi 0.77 >More info 0.64 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
97 SA 4mM 0.77 >More info 0.64 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
98 DC3000 2 h (leaf) 0.71 >More info 0.70 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
99 cpr5npr1svi1 0.71 >More info 0.70 >More info WT(COL) Original data GEO bulk
100 bak1-3 +Pep2 10h 0.75 >More info 0.65 >More info WT +Pep2 10h Pep2 Original data GEO bulk
101 Col whole leaf 7dpi 0.68 >More info 0.72 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
102 WT-SA 0.74 >More info 0.66 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
103 Cor hrpS 10h 0.77 >More info 0.63 >More info Mock 10h Cor hrpS Original data GEO bulk
104 Elevated CO2 AMPLE N NIGHT 0.67 >More info 0.72 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
105 rcf1-1 cold 24h 0.68 >More info 0.71 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
106 Col-0 low oxygen 0.74 >More info 0.65 >More info Col-0 Original data GEO bulk
107 mpk6-ko Flg22 4h 0.66 >More info 0.73 >More info mpk6-ko H2O 4h Original data GEO bulk
108 35S::ERF104 Flg22 4h 0.67 >More info 0.72 >More info 35S::ERF104 H2O 4h Original data GEO bulk
109 SLWF infested 0.74 >More info 0.65 >More info SLWF uninfested rosette tissue Original data GEO bulk
110 rao2 H2O2 3h -0.70 >More info -0.69 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
111 Mutant gh3.5-1D (AvrRpt2) 0.69 >More info 0.70 >More info Col-0 (AvrRpt2) Original data GEO bulk
112 CMV-WT 0.72 >More info 0.66 >More info Mock-At Aerial tissues Original data GEO bulk
113 pmr5 pmr6 0.70 >More info 0.68 >More info Col-0 Original data GEO bulk
114 Pto inoculated 0.70 >More info 0.68 >More info col Original data GEO bulk
115 Atss3 Light4 -0.71 >More info -0.66 >More info Atss3 Dark0.5 Original data GEO bulk
116 WT Bc inoculation 14h 0.79 >More info 0.58 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
117 erf104-ko Flg22 4h 0.64 >More info 0.73 >More info erf104-ko H2O 4h Original data GEO bulk
118 GO5; 8h switch to ambient CO2 concentrations; 0.61 >More info 0.76 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
119 Shoot -K 0.72 >More info 0.65 >More info Control-shoot Original data GEO bulk
120 AFB1 flg22 1h 0.67 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
121 K starvation (shoot) 0.72 >More info 0.65 >More info Ws (shoot) Original data GEO bulk
122 msh1 albino 0.72 >More info 0.64 >More info WT aerial part Original data GEO bulk
123 low CO2 + light 0.67 >More info 0.69 >More info normal CO2 + light Original data GEO bulk
124 bHLH122 ox -0.62 >More info -0.74 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
125 TNT-seedlings 0.73 >More info 0.63 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
126 del1-1 mutant 5d uninfected 0.70 >More info 0.65 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
127 miR393 flg22 2h 0.62 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
128 5-Triiodobenzoic acid3 h 0.70 >More info 0.65 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
129 Laer pretreat JA Flg22 2h 0.72 >More info 0.63 >More info Laer pretreat water control leaf discs Original data GEO bulk
130 E.coli 0157 H7 7h 0.65 >More info 0.69 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
131 AFB1 flg22 2h 0.71 >More info 0.63 >More info WT 0h Leaf tissue Original data GEO bulk
132 root stele 40 mM NaCls 0.70 >More info 0.64 >More info root stele Original data GEO bulk
133 inhibitor A Treated 0.61 >More info 0.73 >More info Negative Control Original data GEO bulk
134 ABA DFPM 0.73 >More info 0.61 >More info control Original data GEO bulk
135 mkk1/mkk2 24h BTH rep 0.70 >More info 0.64 >More info Col-0 24h BTH rep Original data GEO bulk
136 wrky33 Bc inoculation 14h 0.80 >More info 0.53 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
137 Laer pretreat GA+JA Flg22 1h 0.72 >More info 0.61 >More info Laer pretreat water control leaf discs Original data GEO bulk
138 anac017-1 H2O2 3h -0.69 >More info -0.64 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
139 WT-NOCO2 INFECTED 0.70 >More info 0.63 >More info WT-MOCK Original data GEO bulk
140 WT 3h -P 0.70 >More info 0.63 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
141 pmr5 0.65 >More info 0.68 >More info Col-0 Original data GEO bulk
142 seedlings-week-old RECA1-overexpressing
transgenic		 0.67 >More info 0.66 >More info seedlings-week-old Col-0 seedlings Original data
143 current injection 0.56 >More info 0.77 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
144 9 hr Hypoxia 1 hr recovery IP RNA 0.76 >More info 0.57 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
145 Dex-rga(delta17) 4h GA4+DEX -0.67 >More info -0.65 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
146 coi1-16 ein2 sid2 ozone 0.80 >More info 0.52 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
147 P.p 6hai 0.70 >More info 0.62 >More info At-Control roots Original data GEO bulk
148 Mutant siz1-3 (Drought) 0.73 >More info 0.59 >More info Col-0 (Drought) Original data GEO bulk
149 siz1-3 drought 0.73 >More info 0.59 >More info Col-0 drought Original data GEO bulk
150 CLO 4mM 0.75 >More info 0.56 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
151 chito-octamer 0.60 >More info 0.71 >More info Col Mock Original data GEO bulk
152 WT NAA/flg 2h 0.64 >More info 0.67 >More info WT 0h Leaf tissue Original data GEO bulk
153 Dark 3day ivd 0.70 >More info 0.61 >More info 0h ivd Original data
154 C24 ozone 0.79 >More info 0.52 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
155 plant (tga2-5-6) 4h phytoprostane A1 0.66 >More info 0.65 >More info plant (tga2-5-6) 4h control Original data GEO bulk
156 Cold Stress 24 h (shoot) 0.68 >More info 0.63 >More info Stress mock 24 h (shoot) Original data Stress treatments
157 21h-DC3000 hrpA -0.61 >More info -0.70 >More info 21h-DC3000 leaves Original data GEO bulk
158 WT+chitooctaose 0.58 >More info 0.73 >More info WT+water chitooctaose seedlings Original data GEO bulk
159 Heat shock optimum 0.66 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
160 Leafminer damaged seedlings 0.74 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
161 ice1 6H Cold 0.64 >More info 0.66 >More info WT 6H Cold Original data GEO bulk
162 Salt Stress 24 h (root) 0.74 >More info 0.56 >More info Stress mock 24 h (root) Original data Stress treatments
163 RRE2 Chitin 0.72 >More info 0.57 >More info Chitin Original data GEO bulk
164 chito-tetramer 0.58 >More info 0.71 >More info Col Mock Original data GEO bulk
165 Laer pretreat GA Flg22 1h 0.58 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
166 S58-2 0.64 >More info 0.65 >More info wt Original data GEO bulk
167 vte2-1 3d vernalization 0.68 >More info 0.61 >More info WT 3d vernalization Original data GEO bulk
168 CMV-A2b mutant 0.69 >More info 0.60 >More info Mock-At Aerial tissues Original data GEO bulk
169 ERF96OE 0.66 >More info 0.63 >More info WT leaf Original data
170 leaf blade in D 0.59 >More info 0.70 >More info leaf blade in WL leaf blades Original data GEO bulk
171 IAA/inhibitor A Treated 0.62 >More info 0.66 >More info IAA Treated Original data GEO bulk
172 Fenclorim 24hr 0.63 >More info 0.65 >More info Acetone 24hr root Original data GEO bulk
173 cat2-2; 8h switch to ambient CO2 concentrations; 0.60 >More info 0.68 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
174 SCR-GR Time 12H Dex 0.72 >More info 0.56 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
175 Dex-rga(delta17) 2h GA4+DEX -0.65 >More info -0.63 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
176 tunicamycin -0.64 >More info -0.64 >More info DMF Original data GEO bulk
177 Mutant coi1(leaf) -0.66 >More info -0.62 >More info Col-0 (leaf) Original data GEO bulk
178 P.p 30hai 0.67 >More info 0.61 >More info At-Control roots Original data GEO bulk
179 8h-DC3000 avrRpm1 0.63 >More info 0.65 >More info 8h-DC3000 leaves Original data GEO bulk
180 Primisulfuron EC50 0.65 >More info 0.62 >More info Carrier (primisulfuron) Original data GEO bulk
181 AvrRpm1 2 h (leaf) 0.64 >More info 0.63 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
182 P.p 10.5hai 0.64 >More info 0.63 >More info At-Control roots Original data GEO bulk
183 plant (Col-0) 4h OPDA 0.70 >More info 0.57 >More info plant (Col-0) 4h control Original data GEO bulk
184 A. thaliana-A. lyrata hybrid -0.65 >More info -0.62 >More info A. thaliana mature leaves before flowering Original data GEO bulk
185 OPDA 4 h 0.70 >More info 0.57 >More info Col-0 Original data GEO bulk
186 P.syringae AvrRpt2 4 h (leaf) 0.70 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
187 Heat shock 20%Inhibition 0.67 >More info 0.60 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
188 nia1nia2 0.67 >More info 0.60 >More info Col-0 whole seedlings Original data GEO bulk
189 pvip1 pvip2 0.62 >More info 0.65 >More info Col-0 whole rosettes Original data GEO bulk
190 9 hr Hypoxia IP RNA 0.68 >More info 0.58 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
191 Heat and anoxia 0.64 >More info 0.62 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
192 plant (tga2-5-6) 4h OPDA 0.71 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
193 JA 0.58 >More info 0.68 >More info Col-0 mock Whole seedling Original data GEO bulk
194 NJ15 0.54 >More info 0.72 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
195 pnp1-1 1wk +P 0.74 >More info 0.52 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
196 OsSAP11 expressing -0.61 >More info -0.65 >More info WT seedlings Original data GEO bulk
197 Laer pretreat GA+JA Flg22 2h 0.68 >More info 0.58 >More info Laer pretreat water control leaf discs Original data GEO bulk
198 petiole in D 0.62 >More info 0.64 >More info petiole in WL petioles Original data GEO bulk
199 Chitosan 3h Treatment 0.67 >More info 0.59 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
200 Elevated CO2 fully expanded leaf 0.72 >More info 0.53 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
201 Col-0 low oxygen 0.68 >More info 0.57 >More info Col-0 control low oxygen root Original data GEO bulk
202 pnp1-1 3h +P 0.68 >More info 0.57 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
203 cpr5npr1 0.68 >More info 0.57 >More info WT(COL) Original data GEO bulk
204 Methyl Jasmonate 0.5 h 0.50 >More info 0.75 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
205 WT 30μM arsenate 8 hours. 0.68 >More info 0.57 >More info WT control (not supplemented). Original data
206 rcf1-1 cold 12h 0.62 >More info 0.63 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
207 atgsnor1-3-avrB-6h 0.65 >More info 0.60 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
208 aerial organ callus inducing medium 96 h 0.62 >More info 0.63 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
209 ASL9-ox -0.68 >More info -0.56 >More info WT aerial parts of seedlings Original data GEO bulk
210 smg7b-1 0.67 >More info 0.57 >More info WT whole plant Original data GEO bulk
211 rosettes WT drought 0.66 >More info 0.58 >More info rosettes WT watered Original data GEO bulk
212 21h-DC3000 avrRpm1 -0.66 >More info -0.58 >More info 21h-DC3000 leaves Original data GEO bulk
213 aerial organ callus inducing medium 48 h 0.66 >More info 0.58 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
214 Protoplast Induced 0.51 >More info 0.73 >More info Uninduced Original data GEO bulk
215 oas-a1.1 Cd 24h 0.59 >More info 0.64 >More info Cd 24h root Shoot Original data GEO bulk
216 Selenate (root) 0.59 >More info 0.64 >More info Ws (root) Original data GEO bulk
217 Root Selenate 0.59 >More info 0.64 >More info Root control 40 micromolar selenate Root Original data GEO bulk
218 root Dosed gold 0.68 >More info 0.55 >More info root No gold .125 mM gold 24 h roots Original data
219 Cor 24h 0.69 >More info 0.54 >More info Mock 24h Cor Original data GEO bulk
220 miR393 0h -0.61 >More info -0.62 >More info WT 0h Leaf tissue Original data GEO bulk
221 phr1 phl1 Root-Pi 0.66 >More info 0.57 >More info WT Shoot+Pi roots Original data GEO bulk
222 0.125 mM gold 24 h 0.68 >More info 0.55 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
223 Hydrogen Peroxide 500 uM 0.53 >More info 0.70 >More info Control RB and PER Hydrogen Peroxide Original data
224 ARR22-ox (t-zeatin 3 h) 0.72 >More info 0.51 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
225 Nicotinamide-53hr 0.68 >More info 0.54 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
226 UV Stress 24 h (shoot) 0.66 >More info 0.56 >More info Stress mock 24 h (shoot) Original data Stress treatments
227 oligomycin 1 h 0.56 >More info 0.66 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
228 gpa1 -ABA GC -0.50 >More info -0.72 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
229 9 hr Hypoxia 1 hr recovery Total RNA 0.71 >More info 0.51 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
230 col-5 hrpA 2h 0.57 >More info 0.65 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
231 Elevated CO2 AMPLE N DAY 0.63 >More info 0.59 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
232 Anoxia 0.57 >More info 0.65 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
233 mkk1/mkk2 control rep 0.65 >More info 0.57 >More info Col-0 Time 0 rep Original data GEO bulk
234 WT +elf18 2h 0.58 >More info 0.63 >More info WT untreated elf18 Original data GEO bulk
235 Phytoprostane A1 4 h 0.61 >More info 0.60 >More info Col-0 Original data GEO bulk
236 root protoplasts 40 mM NaCl 0.59 >More info 0.62 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
237 PNO8 3 h 0.51 >More info 0.70 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
238 upf3 0.63 >More info 0.58 >More info WT whole plant Original data GEO bulk
239 sicy-192 gun1-101 cotyledons 0.62 >More info 0.59 >More info WT cotyledons cotyledons Original data
240 coi1-PsmES4326-24hpi -0.52 >More info -0.69 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
241 ex2 flu dark 8hours/30 minute light 0.47 >More info 0.74 >More info col dark 8hours/30 minute light Original data GEO bulk
242 Rsch 8h 0.46 >More info 0.75 >More info Rsch CA Leaves Original data
243 1 h Light IP RNA -0.54 >More info -0.66 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
244 Ws 100mM NaCl 0.65 >More info 0.55 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
245 Ws leaf 100mM NaCl 0.65 >More info 0.55 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
246 aba1 hypocotyl 0.53 >More info 0.67 >More info Ler hypocotyl hypocotyl Original data GEO bulk
247 dor drought 0.64 >More info 0.56 >More info WT drought Original data GEO bulk
248 Mature callus 0.64 >More info 0.56 >More info Young callus hypocotyls Original data GEO bulk
249 ckh1 CK200 0.55 >More info 0.65 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
250 Col ozone 2d 0.53 >More info 0.67 >More info Col clean-air 2d ozone Original data GEO bulk
251 inhibitor B Treated 0.52 >More info 0.68 >More info Negative Control Original data GEO bulk
252 6h +Pi -0.68 >More info -0.52 >More info 6h -Pi root Original data GEO bulk
253 ice1 3H Cold 0.59 >More info 0.61 >More info WT 3H Cold Original data GEO bulk
254 Laer pretreat GA Flg22 0h 0.69 >More info 0.51 >More info Laer pretreat water control leaf discs Original data GEO bulk
255 pad4-PsmES4326-24hpi -0.63 >More info -0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
256 Leaf GLU1-KO 0.62 >More info 0.58 >More info Leaf Col(0) rosette leaves Original data GEO bulk
257 1 h Light Total RNA -0.59 >More info -0.61 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
258 cell culture 4 h phytoprostane A1 0.60 >More info 0.60 >More info cell culture 4 h control Original data GEO bulk
259 bZIP1ko mutant N+Light- 0.50 >More info 0.70 >More info WT-sib N+Light- whole plant Original data GEO bulk
260 R. solani AG8 0.69 >More info 0.51 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
261 8hr-pH4.5 0.65 >More info 0.54 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
262 dde2-2 9 hpi A. brassicicola 0.66 >More info 0.53 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
263 sid2-1 cold -0.63 >More info -0.56 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
264 Triazolopyrimidine EC50 0.63 >More info 0.56 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
265 low CO2 + dark 0.60 >More info 0.59 >More info normal CO2 + light Original data GEO bulk
266 stn7-1 -0.64 >More info -0.54 >More info Col-0 rosette leaves Original data GEO bulk
267 WT in -N 0.64 >More info 0.54 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
268 WT no Pi 0.66 >More info 0.52 >More info WT complete seedlings Original data
269 Compost 0.62 >More info 0.56 >More info Perlite Compost Original data GEO bulk
270 Col 1d 0.52 >More info 0.66 >More info Col CA Leaves Original data
271 pho1 0.70 >More info 0.48 >More info Col2WT Original data GEO bulk
272 ice1 24H Cold 0.59 >More info 0.59 >More info WT 24H Cold Original data GEO bulk
273 sni1 0.60 >More info 0.58 >More info WT Original data GEO bulk
274 Col-O high light 0.58 >More info 0.60 >More info Col-O bule light Original data GEO bulk
275 S15-118 0.60 >More info 0.58 >More info wt Original data GEO bulk
276 Leafminer systemically damaged thaliana seedlings 0.57 >More info 0.61 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
277 coi1-2 0.58 >More info 0.59 >More info Col-0 mock Whole seedling Original data GEO bulk
278 ORS1 induced 0.54 >More info 0.63 >More info mock-induced rosette leaves Original data GEO bulk
279 ein5-1 ski2-3 0.57 >More info 0.60 >More info Col-0 aerial tissue Original data
280 P.p 2.5hai 0.62 >More info 0.55 >More info At-Control roots Original data GEO bulk
281 LTN008-2 aza-dc 0.68 >More info 0.49 >More info LTN012-2 Mock Original data
282 WT powdery mildew 0.61 >More info 0.56 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
283 Seedling-HeatStressed POLYSOMESmRNA 0.50 >More info 0.67 >More info Seedling-control POLYSOMESmRNA seedling Original data
284 PAHs stress 0.61 >More info 0.56 >More info exp control phenanthrene whole plants Original data GEO bulk
285 edr1 18 h powdery mildew 0.66 >More info 0.51 >More info Col-0 18 h powdery mildew Original data GEO bulk
286 Nicotinamide-57hr 0.67 >More info 0.50 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
287 abi1 hypocotyl 0.47 >More info 0.70 >More info Ler hypocotyl hypocotyl Original data GEO bulk
288 whole roots 140 mM NaCl 1 hour 0.60 >More info 0.56 >More info whole roots standard Original data GEO bulk
289 WT +elf18 10h 0.60 >More info 0.56 >More info WT untreated elf18 Original data GEO bulk
290 atmospheric CO2 high Mg shoot 0.67 >More info 0.49 >More info atmospheric CO2 normal Mg shoot Shoot Original data
291 WT resupplied Pi 4h 0.64 >More info 0.52 >More info WT complete seedlings Original data
292 WT 24H Cold 0.60 >More info 0.56 >More info WT control Original data GEO bulk
293 Cocultivation 8 hrs root 0.63 >More info 0.53 >More info Mock cocultivation 8 hrs root Root Original data
294 sta1 0.55 >More info 0.60 >More info WT Original data GEO bulk
295 aerial organ callus inducing medium 12 h 0.53 >More info 0.62 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
296 Col leaf 100mM NaCl 0.63 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
297 atgsnor1-1 -0.57 >More info -0.58 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
298 Col leaf 100mM NaCl 0.63 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
299 toc1-1-77hr 0.72 >More info 0.43 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
300 mil4 BTH 0.60 >More info 0.55 >More info Col BTH rosettes Original data GEO bulk
301 Col 100mM NaCl 0.63 >More info 0.52 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
302 rpoTmp(line) MLD stressed 0.56 >More info 0.59 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
303 rosette leaves lcr 0.56 >More info 0.59 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
304 Seedling-HeatStressed TOTALmRNA 0.53 >More info 0.62 >More info Seedling-control TOTALmRNA seedling Original data
305 sfr6 drought -0.49 >More info -0.66 >More info WT drought All aerial tissue Original data GEO bulk
306 Rose Bengal 0.5 uM 0.43 >More info 0.72 >More info Control RB and PER Rose Bengal Original data
307 Salt Stress 24 h (shoot) 0.61 >More info 0.53 >More info Stress mock 24 h (shoot) Original data Stress treatments
308 toc1-1-49hr 0.56 >More info 0.58 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
309 Light 0.52 >More info 0.62 >More info Control Original data GEO bulk
310 cpr5 0.60 >More info 0.54 >More info WT(COL) Original data GEO bulk
311 flu dark 8hours/30 minute light 0.37 >More info 0.77 >More info col dark 8hours/30 minute light Original data GEO bulk
312 Col-0 INA 48h 0.65 >More info 0.48 >More info Col-0 MOCK 48h Original data GEO bulk
313 Methyl Jasmonate 3 h 0.56 >More info 0.57 >More info Mock 3 h Original data Basic hormone treatment of seedlings
314 aba3-1 0.54 >More info 0.59 >More info wt Original data GEO bulk
315 rosette leaves fdh 0.59 >More info 0.54 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
316 eds16 whole leaf 5dpi -0.60 >More info -0.53 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
317 Cd 24h root -0.54 >More info -0.59 >More info WT-Untreated Shoot Original data GEO bulk
318 cpr5 0.63 >More info 0.50 >More info WT seedling Original data GEO bulk
319 aox1a(line) MLD stressed 0.59 >More info 0.54 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
320 4d red light grown hmr-5 seedlings 0.59 >More info 0.54 >More info 4d red light grown WT(Col-0) seedlings Original data
321 leaf blade in FRD 0.56 >More info 0.57 >More info leaf blade in WL leaf blades Original data GEO bulk
322 vte2 leaves 48h LT 0.64 >More info 0.49 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
323 wt systemic wounding 0.60 >More info 0.53 >More info wt control leaves Original data GEO bulk
324 Laer pretreat JA Flg22 0h 0.49 >More info 0.64 >More info Laer pretreat water control leaf discs Original data GEO bulk
325 Col leaf scrape 5 dpi 0.60 >More info 0.52 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
326 ataf1-1 mutant Col-0 Un-inoculated -0.62 >More info -0.50 >More info WT Col-0 Un-inoculated Original data GEO bulk
327 Col-0 48 hpi 0.61 >More info 0.51 >More info Col-0 uninoculated Original data GEO bulk
328 shoot-10 μM DEX- 6 hr 0.57 >More info 0.55 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
329 WT Shoot-Pi 0.62 >More info 0.50 >More info WT Shoot+Pi shoots Original data GEO bulk
330 aerial organ callus inducing medium 24h 0.57 >More info 0.55 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
331 edr1 36 h powdery mildew 0.57 >More info 0.55 >More info Col-0 36 h powdery mildew Original data GEO bulk
332 Col-0 drought 0.58 >More info 0.54 >More info Col-0 control Original data GEO bulk
333 Col-0 SA 0.67 >More info 0.44 >More info Col-0 Original data GEO bulk
334 root callus inducing medium 96 h -0.66 >More info -0.45 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
335 arf2 brz -0.56 >More info -0.55 >More info arf2 mock Original data GEO bulk
336 Col-0 37C 0.58 >More info 0.53 >More info Col-0 22C Original data GEO bulk
337 Col-0 Flg22 4h 0.52 >More info 0.59 >More info Col-0 H2O 4h Original data GEO bulk
338 oas-a1.1 Cd 18h 0.50 >More info 0.61 >More info Cd 18h root Root Original data GEO bulk
339 root protophloem 40 mM NaCl 0.63 >More info 0.48 >More info root protophloem Original data GEO bulk
340 D2O 0.63 >More info 0.48 >More info H2O seedling Original data GEO bulk
341 WT 6H Cold 0.53 >More info 0.58 >More info WT control Original data GEO bulk
342 Nicotinamide-73hr 0.61 >More info 0.50 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
343 Rsch 1d 0.49 >More info 0.62 >More info Rsch CA Leaves Original data
344 pepr1-1 Pepr2-3 +Pep2 10h -0.57 >More info -0.53 >More info WT +Pep2 10h Pep2 Original data GEO bulk
345 vtc2 (I) 0.56 >More info 0.54 >More info Col (I) rosette Original data GEO bulk
346 abi4-102 (II) 0.60 >More info 0.50 >More info Col (II) rosette Original data GEO bulk
347 (Col-0)+100 uM As 0.52 >More info 0.58 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
348 UV 0.66 >More info 0.44 >More info WT aerial region Original data GEO bulk
349 ppi2 0.57 >More info 0.53 >More info WT whole plant Original data GEO bulk
350 (Col-0)+200 uM As 0.54 >More info 0.56 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
351 IRP1-OE-Ctrl--root 0.53 >More info 0.57 >More info COL-0-Ctrl--root root Original data
352 Heat shock 30%Inhibition 0.55 >More info 0.55 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
353 ced1 -0.55 >More info -0.55 >More info WT PEG 6hr seedlings Original data GEO bulk
354 opr3 JA 2 h 0.38 >More info 0.72 >More info opr3 0 h Original data GEO bulk
355 ani1 T0.5 -0.56 >More info -0.53 >More info WT T0.5 root tissue Original data GEO bulk
356 Col-0 +ABA LF 0.56 >More info 0.53 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
357 WT chitooctaose 0.45 >More info 0.64 >More info WT water Original data GEO bulk
358 FLIGHT TAGESB plate6 ROOTS 0.45 >More info 0.64 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
359 smg5-2 0.58 >More info 0.51 >More info WT whole plant Original data GEO bulk
360 WT cotyledons -0.59 >More info -0.50 >More info Control for tissue data cotyledons Original data
361 GST-overexpression seedlings control 0.74 >More info 0.35 >More info WT seedlings control Seedlings Original data
362 opr3 OPDA 2 h 0.39 >More info 0.70 >More info opr3 0 h Original data GEO bulk
363 Col-0 2HS 0.51 >More info 0.57 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
364 GO5; 0h switch to ambient CO2 concentrations; -0.60 >More info -0.48 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
365 R. solani AG2-1 0.61 >More info 0.47 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
366 M6PR transgenic leaf 100mM NaCl -0.51 >More info -0.57 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
367 petiole in FRD 0.57 >More info 0.51 >More info petiole in WL petioles Original data GEO bulk
368 WT roots - Fe 0.69 >More info 0.39 >More info WT roots + Fe Roots Original data GEO bulk
369 35S:RPS4 rrs1-11 8h -0.59 >More info -0.49 >More info 35S:RPS4 8h leaves Original data
370 gh3.5D uninoculated -0.62 >More info -0.46 >More info Col-0 48 hpi Original data GEO bulk
371 IAA/inhibitor B Treated 0.44 >More info 0.64 >More info IAA Treated Original data GEO bulk
372 WT 90-105 min Xanthomonas 0.46 >More info 0.62 >More info WT T0 Original data GEO bulk
373 bZIP1ko mutant N+Light+ 0.63 >More info 0.44 >More info WT-sib N+Light+ whole plant Original data GEO bulk
374 SOS1 0mM NaCl 0.64 >More info 0.43 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
375 9 hr Hypoxia Total RNA 0.62 >More info 0.45 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
376 cs26 long day 0.54 >More info 0.53 >More info Leaves-WT-LD leaf Original data GEO bulk
377 abi4 vtc2 (I) 0.56 >More info 0.51 >More info Col (I) rosette Original data GEO bulk
378 6-trichlorophenoxyacetic acid 3 h 0.46 >More info 0.61 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
379 mkk2 24h BTH rep 0.43 >More info 0.64 >More info Col-0 24h BTH rep Original data GEO bulk
380 Ambient CO2 leaf primordia -0.57 >More info -0.50 >More info Control for tissue data leaf primordia Original data
381 upf1 0.58 >More info 0.49 >More info WT whole plant Original data GEO bulk
382 short 8-degree- 0.57 >More info 0.50 >More info control short Original data GEO bulk
383 Light 3day wt -0.59 >More info -0.48 >More info 0h wt Original data
384 Dark 6h ivd 0.59 >More info 0.48 >More info 0h ivd Original data
385 Ambient CO2 expanding leaf -0.59 >More info -0.48 >More info Control for tissue data expanding leaf Original data
386 35S:VND7-VP16-GR+CHX 0.49 >More info 0.58 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
387 WT-Dry 0.38 >More info 0.69 >More info WT-CK dehydration treatment 1h Original data
388 M6PR transgenic 0mM NaCl 0.60 >More info 0.46 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
389 rosettes myoox drought 0.55 >More info 0.51 >More info rosettes myoox watered Original data GEO bulk
390 scrm-D 0.59 >More info 0.47 >More info Col-0 WT whole seedling Original data GEO bulk
391 WT cold 0.58 >More info 0.48 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
392 Col-0-3h IAA 0.62 >More info 0.44 >More info Col-0-0h IAA whole plant Original data GEO bulk
393 TA induced 0.52 >More info 0.54 >More info Methanol TA Suspension cells Original data GEO bulk
394 myb3 myb3r4d 0.56 >More info 0.50 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
395 til1-1 22C 0.49 >More info 0.57 >More info Col-0 22C Original data GEO bulk
396 35S:RPS4 eds1-2 2h -0.41 >More info -0.65 >More info 35S:RPS4 2h leaves Original data
397 Wt-BA-sample 0.48 >More info 0.58 >More info Wt-dmso-sample seedling Original data
398 Te 8h 0.41 >More info 0.65 >More info Te CA Leaves Original data
399 Imidazolinone EC50 0.59 >More info 0.46 >More info Carrier (Imidazolinone) Original data GEO bulk
400 whole roots 140 mM NaCl 30 minutes 0.52 >More info 0.53 >More info whole roots standard Original data GEO bulk
401 sid2-avrB-6h 0.53 >More info 0.52 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
402 WT light -0.56 >More info -0.49 >More info WT dark Original data GEO bulk
403 Elevated CO2 expanding leaf 0.51 >More info 0.54 >More info Ambient CO2 expanding leaf expanding leaf Original data
404 csn5 (csn5a-2 csn5b) light 0.63 >More info 0.42 >More info WT light Original data GEO bulk
405 low water potential 0.63 >More info 0.42 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
406 HSP90 Reduced RNAi-A3 0.57 >More info 0.48 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
407 Nicotinamide-69hr 0.58 >More info 0.47 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
408 coronatine 0.58 >More info 0.47 >More info control rosette leaves Original data
409 short 10-degree- 0.56 >More info 0.48 >More info control short Original data GEO bulk
410 aox1a:rpoTmp MLD stressed -0.51 >More info -0.53 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
411 arf2 mock 0.50 >More info 0.54 >More info Col mock Original data GEO bulk
412 Mutant cry1 (High Light) -0.65 >More info -0.39 >More info Col-0 (High Light) Original data GEO bulk
413 WT 1wk -P 0.74 >More info 0.30 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
414 (Ws-2)+100 uM As 0.50 >More info 0.54 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
415 Mutant arf2 (etiol) 0.50 >More info 0.54 >More info Col (etiol) Original data GEO bulk
416 npr1 sni1 SA 0.54 >More info 0.50 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
417 pskr1-5 -0.53 >More info -0.51 >More info wild type Cotyledons Original data GEO bulk
418 cry1 high light -0.65 >More info -0.39 >More info Col-O high light Original data GEO bulk
419 15m.KCl 0.47 >More info 0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
420 tt4 0.48 >More info 0.56 >More info Col-0 aerial part Original data
421 Transgenic LEC2GR Seedling 1h Dex 0.58 >More info 0.45 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
422 ein2-PsmES4326-24hpi -0.54 >More info -0.49 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
423 leaf rlt1-1rlt2-1 -0.56 >More info -0.47 >More info leaf Col-0 leaf Original data GEO bulk
424 Nicotinamide-93hr 0.62 >More info 0.41 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
425 root columella root cap 40 mM NaCl 0.55 >More info 0.48 >More info root columella root cap Original data GEO bulk
426 gpa1 -ABA LF 0.50 >More info 0.53 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
427 camta1/2/3 warm 0.53 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
428 Nicotinamide-65hr 0.63 >More info 0.40 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
429 nia1nia2noa1-2 0.59 >More info 0.44 >More info Col-0 whole seedlings Original data GEO bulk
430 GA 0.38 >More info 0.65 >More info none GA Rosette Original data GEO bulk
431 Col-0-1h IAA 0.60 >More info 0.42 >More info Col-0-0h IAA whole plant Original data GEO bulk
432 Nicotinamide-49hr 0.62 >More info 0.40 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
433 Rosette leaf No12 -0.57 >More info -0.45 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
434 Bur-0-3h IAA 0.52 >More info 0.50 >More info Bur-0h IAA whole plant Original data GEO bulk
435 anac017-2 H2O2 3h -0.65 >More info -0.37 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
436 toc1-1-53hr 0.61 >More info 0.41 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
437 ACC 3 h 0.39 >More info 0.63 >More info Mock 3 h Original data Basic hormone treatment of seedlings
438 Col in Pi deficiency medium 0.48 >More info 0.54 >More info Col in control medium root Original data GEO bulk
439 clf-28 swn-7 0.49 >More info 0.53 >More info Col whole plant Original data GEO bulk
440 RPL18 TuMV inoculated total RNA 0.46 >More info 0.56 >More info mock inoculated total RNA PO Original data GEO bulk
441 CabpBVR2 0.48 >More info 0.54 >More info WT Original data GEO bulk
442 Laer Alternaria 3dpi -0.53 >More info -0.48 >More info Laer Control leaf discs Original data GEO bulk
443 mbd6 mutant thaliana 10-day-old seedling 0.58 >More info 0.43 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
444 penta Control 0.64 >More info 0.37 >More info Laer Control leaf discs Original data GEO bulk
445 Mutant arf2-6 -0.61 >More info -0.40 >More info Col Original data GEO bulk
446 ML (Mature leaves) 35DAS -0.56 >More info -0.45 >More info Control for tissue data Original data GEO bulk
447 cs26 short-day -0.50 >More info -0.51 >More info Leaves-WT-SD leaf Original data GEO bulk
448 vtc1 (II) 0.50 >More info 0.51 >More info Col (II) rosette Original data GEO bulk
449 Glyphosate EC50 0.62 >More info 0.39 >More info Carrier (Glyphosate) Original data GEO bulk
450 FHY3p dark+DEX -0.57 >More info -0.44 >More info FHY3p dark+mock Original data GEO bulk
451 Col-0 HS 0.39 >More info 0.62 >More info Col-0 control heat shocked seedling Original data GEO bulk
452 gpa1-4/agb1-2 ozone 2d -0.35 >More info -0.66 >More info Col ozone 2d ozone Original data GEO bulk
453 WT (Col-0) heat shock 0.39 >More info 0.62 >More info WT (Col-0) whole seedling Original data GEO bulk
454 AtLysM RLK1 mutant chitooctaose -0.42 >More info -0.59 >More info WT chitooctaose Original data GEO bulk
455 shoots WT 0uM Fe 0.64 >More info 0.36 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
456 35:SUB1A 0.55 >More info 0.45 >More info WT whole seedling Original data GEO bulk
457 WT +Pep2 2h 0.65 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
458 rdr6-15 -0.53 >More info -0.47 >More info Col-0 Original data GEO bulk
459 Col-0 DCA 48h 0.49 >More info 0.51 >More info Col-0 MOCK 48h Original data GEO bulk
460 wavy 0.47 >More info 0.53 >More info WT Original data GEO bulk
461 cat2-short-day 2d 0.44 >More info 0.56 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
462 max4 hypocotyl 0.49 >More info 0.51 >More info wt hypocotyl hypocotyl Original data GEO bulk
463 aox1a:rpoTmp untreated 0.48 >More info 0.52 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
464 root callus inducing medium 48 h -0.61 >More info -0.38 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
465 vtc1-1 -0.37 >More info -0.62 >More info Col-0 whole plant Original data GEO bulk
466 gpa1 +ABA GC -0.39 >More info -0.60 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
467 WT Red light 18h -0.46 >More info -0.53 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
468 6h volatiles Sp. HRO-C48 0.34 >More info 0.65 >More info 6h untreated whole seedling Original data GEO bulk
469 WT 24h cold 0.46 >More info 0.53 >More info WT warm 24h cold entire aerial part Original data GEO bulk
470 mbd4 mutant thaliana 10-day-old seedling 0.63 >More info 0.35 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
471 Nicotinamide-81hr 0.64 >More info 0.34 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
472 ein3 eil1 0.66 >More info 0.32 >More info Col-0 mock Whole seedling Original data GEO bulk
473 EL (leaves 1-2) 14DAS -0.52 >More info -0.46 >More info Control for tissue data Original data GEO bulk
474 Apex 14DAS -0.54 >More info -0.44 >More info Control for tissue data Original data GEO bulk
475 Col whole leaf amplified 5 dpi 0.54 >More info 0.44 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
476 JA 3h 0.27 >More info 0.71 >More info EtOH 3h 3hr Original data GEO bulk
477 abh1 -ABA 0.43 >More info 0.55 >More info Col-0 -ABA Original data GEO bulk
478 sicy-192 cotyledons 0.35 >More info 0.63 >More info WT cotyledons cotyledons Original data
479 gun1-9 norflurazon 0.55 >More info 0.42 >More info gun1-9 control Original data GEO bulk
480 ws 24h4c q8ws 0.63 >More info 0.34 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
481 tbf1-elf18 -0.53 >More info -0.44 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
482 tor mutant glucose 0.51 >More info 0.46 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
483 OsRLCK253 expressing -0.40 >More info -0.57 >More info WT seedlings Original data GEO bulk
484 cat2-short-day 4d 0.30 >More info 0.67 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
485 HARAP aerobic -0.35 >More info -0.62 >More info WT aerobic aerobic Original data GEO bulk
486 OE WRKY63.3 high light 0.46 >More info 0.51 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
487 Col-0 +lincomycin 0.40 >More info 0.57 >More info Col-0 -lincomycin Original data GEO bulk
488 Col 3d 0.42 >More info 0.55 >More info Col CA Leaves Original data
489 sid2 -0.55 >More info -0.41 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
490 seedling 6h after HZE WT 0.50 >More info 0.46 >More info seedling day 1 unirradiated WT 6h Original data
491 20d after anthesis 0.53 >More info 0.43 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
492 Nicotinamide-89hr 0.60 >More info 0.36 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
493 sps1 -0.65 >More info -0.31 >More info WT seedling Original data GEO bulk
494 HSP90 Reduced RNAi-A2 0.51 >More info 0.45 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
495 Mutant iaa5_6_19(IAA) 0.43 >More info 0.53 >More info Col (IAA) Original data GEO bulk
496 RGA-GR-DEX 0.37 >More info 0.59 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
497 opr3 JA 0.5 h 0.23 >More info 0.73 >More info opr3 0 h Original data GEO bulk
498 4C 2h(SOIL) 0.37 >More info 0.59 >More info 4C 0h(SOIL) Original data GEO bulk
499 Dex-rga(delta17) 4h GA4 -0.42 >More info -0.54 >More info Vector 4h GA4 shoots Original data GEO bulk
500 Col BTH 0.29 >More info 0.67 >More info Col rosettes Original data GEO bulk
501 seedling 12h after HZE WT 0.44 >More info 0.52 >More info seedling day 1 unirradiated WT 12h Original data
502 atr mitomycin C 0.55 >More info 0.40 >More info WT mitomycin C shoot apical meristem Original data
503 C24-3h IAA 0.55 >More info 0.40 >More info C24-0h IAA whole plant Original data GEO bulk
504 Apex 5DAS -0.53 >More info -0.42 >More info Control for tissue data Original data GEO bulk
505 RRE1 Chitin 0.57 >More info 0.38 >More info Chitin Original data GEO bulk
506 IRP1-OE-Fe--shoot 0.54 >More info 0.41 >More info COL-0-Fe--shoot shoot Original data
507 Flower (stage12) -0.52 >More info -0.43 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
508 Leaf wounded 0.24 >More info 0.71 >More info Leaf control vegetative leaf Original data GEO bulk
509 col-5 hrpA 4h 0.42 >More info 0.53 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
510 Te 1d 0.42 >More info 0.53 >More info Te CA Leaves Original data
511 Nicotinamide-85hr 0.55 >More info 0.39 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
512 9m.KCl 0.39 >More info 0.55 >More info To. KCl 14 day old Roots Original data GEO bulk
513 Kas-1 -Fe 24h -0.40 >More info -0.54 >More info Kas-1 +Fe 24h roots Original data GEO bulk
514 Kas -Fe 24h Roots -0.40 >More info -0.54 >More info Kas +Fe 24h Roots Original data GEO bulk
515 fls1-3 0.38 >More info 0.56 >More info Col-0 Rosette leaves Original data
516 Col 8h 0.40 >More info 0.54 >More info Col CA Leaves Original data
517 pnp1-1 1wk -P 0.61 >More info 0.33 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
518 downy mildew cotyledons late stage 0.71 >More info 0.23 >More info mock inoculated Cotyledons Original data GEO bulk
519 auxin and brassinazole seedlings 0.59 >More info 0.35 >More info auxin seedlings Original data GEO bulk
520 Shoot apex transition (before bolting) -0.50 >More info -0.44 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
521 WT Seedling BL+ABA 0.53 >More info 0.40 >More info WT Seedling BL Original data GEO bulk
522 aba2 1% sucrose 12-day-old 0.53 >More info 0.40 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
523 Ambient CO2 fully expanded leaf -0.53 >More info -0.40 >More info Control for tissue data fully expanded leaf Original data
524 WT 3H Cold 0.27 >More info 0.66 >More info WT control Original data GEO bulk
525 Expanding leaf -0.50 >More info -0.43 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
526 24h SL Attim 17-1 1 -0.51 >More info -0.42 >More info 0 h Attim 17-1 1 seed Original data
527 rcf1-1 cold 0h 0.58 >More info 0.35 >More info WT cold 0h Control seedlings Original data GEO bulk
528 atmospheric CO2 low Mg shoot 0.59 >More info 0.34 >More info atmospheric CO2 normal Mg shoot Shoot Original data
529 npr1-3 MOCK 48h -0.43 >More info -0.50 >More info Col-0 MOCK 48h Original data GEO bulk
530 gabaculin 0.41 >More info 0.52 >More info WT Col-0 seedling Original data GEO bulk
531 atmyc2 Seedling BL+ABA -0.42 >More info -0.51 >More info WT Seedling BL+ABA Original data GEO bulk
532 SCR-GR Time 1H Dex 0.52 >More info 0.40 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
533 proline -0.38 >More info -0.54 >More info noneHS Original data GEO bulk
534 agb1 gpa1 -ABA GC -0.28 >More info -0.64 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
535 sfr3 cold 0.58 >More info 0.34 >More info WT-cold aerial tissues Original data GEO bulk
536 apk1 apk2 0.50 >More info 0.42 >More info Col0-control whole rosette Original data GEO bulk
537 24h SL WT -0.51 >More info -0.41 >More info 0 h WT seed Original data
538 AtMYB30-as 90-105 min Xanthomonas 0.50 >More info 0.42 >More info WT 90-105 min Xanthomonas Original data GEO bulk
539 Got7 UV 0.33 >More info 0.59 >More info Got7 mock UV seedling Original data
540 Infected pft1 leaf 0.29 >More info 0.63 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
541 pif4pif5 mut dark -0.34 >More info -0.58 >More info WT dark Original data GEO bulk
542 npr1 sni1 brca2a SA -0.42 >More info -0.50 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
543 gai MeJA 1h -0.55 >More info -0.36 >More info Laer MeJA 1h leaf discs Original data GEO bulk
544 sng1 UV 0.63 >More info 0.28 >More info UV aerial region Original data GEO bulk
545 Cold Stress 24 h (root) 0.56 >More info 0.35 >More info Stress mock 24 h (root) Original data Stress treatments
546 WT Shoot Hypoxia 0.54 >More info 0.37 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
547 Red/FR Light45min 0.13 >More info 0.78 >More info FarRed Light 45min Original data Light treatments
548 Shoot submergence 24h 0.38 >More info 0.53 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
549 WT Seedling BL -0.40 >More info -0.51 >More info WT Seedling Dark Original data GEO bulk
550 Col upon hypoxia 6 hrs 0.59 >More info 0.32 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
551 amiR-tor induced 6d 0.51 >More info 0.39 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
552 WT 1mM phosphate 8 hours. -0.55 >More info -0.35 >More info WT control (not supplemented). Original data
553 Osmotic Stress 24 h (root) 0.60 >More info 0.30 >More info Stress mock 24 h (root) Original data Stress treatments
554 plant (Col-0) 4h phytoprostane A1 0.34 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
555 treated group 0.50 >More info 0.39 >More info Control group Original data
556 albino Ds13-2198-1 -0.50 >More info -0.39 >More info control Original data GEO bulk
557 P35S:rGRF3 0.54 >More info 0.35 >More info WS Original data GEO bulk
558 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.37 >More info -0.52 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
559 SHR-GR Time 1H Dex 0.58 >More info 0.31 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
560 penta Pst DC3000 12hpi 0.60 >More info 0.29 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
561 sfr3 cold 0.52 >More info 0.36 >More info WT cold All aerial tissue Original data GEO bulk
562 Heat 0.38 >More info 0.50 >More info Control 90 minutes at 38°C. Original data GEO bulk
563 GiantCell Root -0.38 >More info -0.50 >More info Control Root laser captured giant cells Original data GEO bulk
564 35S::MBF1c 0.38 >More info 0.50 >More info control Original data GEO bulk
565 col-5 DC3000 4h 0.23 >More info 0.65 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
566 seedling 24h after HZE WT 0.53 >More info 0.34 >More info seedling day 2 unirradiated WT 24h Original data
567 root callus inducing medium 24h -0.55 >More info -0.32 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
568 agb1 gpa1 -ABA LF 0.31 >More info 0.56 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
569 csn3-1 light 0.52 >More info 0.35 >More info WT light Original data GEO bulk
570 Dark 4 h pls RedLight 1min -0.37 >More info -0.50 >More info Dark 4 h Original data Light treatments
571 agb1 -ABA LF 0.22 >More info 0.65 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
572 NahG 0.37 >More info 0.50 >More info Col-0 Leaves Original data GEO bulk
573 SCR-GR Time 3H Dex 0.56 >More info 0.30 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
574 35SpBVR3 0.33 >More info 0.53 >More info WT Original data GEO bulk
575 pil5 red light 0.50 >More info 0.36 >More info Col-0 red light Original data GEO bulk
576 seedlings +5AC 0.59 >More info 0.27 >More info control seedlings 10-day old whole seedling Original data GEO bulk
577 wnk8-2 untreated -0.35 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
578 atsf1-2 mutant seedling 0.36 >More info 0.50 >More info Col-0 seedling seedlings Original data
579 del1-1 5dpi 0.57 >More info 0.29 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
580 AFB1 0h 0.56 >More info 0.29 >More info Col 0h Leaf Original data GEO bulk
581 atr mock 0.51 >More info 0.34 >More info WT mock shoot apical meristem Original data
582 Ws HS 0.33 >More info 0.52 >More info Ws control heat shocked seedling Original data GEO bulk
583 BLM+INA 0.57 >More info 0.28 >More info CK BLM and INA seedling Original data
584 rpl24 total 0.51 >More info 0.33 >More info WT total seedling shoot/aerial seedling Original data
585 8-DAC chr11-1chr17-1 0.53 >More info 0.31 >More info 8-DAC Col-0 leaf explants Original data
586 toc1-1-57hr 0.53 >More info 0.31 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
587 Mock pft1 leaf 0.17 >More info 0.67 >More info Mock Col-0 leaf water leaf Original data GEO bulk
588 siliques AtHb1 control 0.32 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
589 short 12-degree- 0.50 >More info 0.33 >More info control short Original data GEO bulk
590 camta3-2 0.56 >More info 0.27 >More info WT Original data GEO bulk
591 35S:RPS4 rrs1-11 2h 0.51 >More info 0.32 >More info 35S:RPS4 2h leaves Original data
592 ulp1c ulp1d 0.54 >More info 0.29 >More info col Original data GEO bulk
593 AtGATA2ox 0.52 >More info 0.31 >More info Col seedling Original data GEO bulk
594 FarRed Light 45min -0.16 >More info -0.67 >More info White Light 45min Original data Light treatments
595 ABA JA 3h 0.32 >More info 0.51 >More info EtOH 3h 3hr Original data GEO bulk
596 WT drought 0.27 >More info 0.56 >More info WT control All aerial tissue Original data GEO bulk
597 cat2-hCO2 -0.57 >More info -0.26 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
598 dicamba 0.57 >More info 0.26 >More info WT mock whole seedling Original data GEO bulk
599 toc1-1-65hr 0.53 >More info 0.29 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
600 spx1 spx2 complete 0.53 >More info 0.29 >More info WT complete seedlings Original data
601 Roots Cd -0.55 >More info -0.27 >More info Roots control Cd Root Original data GEO bulk
602 Col-0 24hpi A. brassicicola 0.80 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
603 roottip hypoxia total 0.53 >More info 0.29 >More info roottip control total Original data GEO bulk
604 per1 in control medium 0.31 >More info 0.51 >More info Col in control medium root Original data GEO bulk
605 Shoot dark control 7h 0.32 >More info 0.50 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
606 35S:RPS4 rrs1-11 T0 0.27 >More info 0.55 >More info 35S:RPS4 T0 leaves Original data
607 dark-hs 0.27 >More info 0.55 >More info dark-control seedling Original data
608 AtMYB30-ox 2-4h Xanthomonas 0.61 >More info 0.21 >More info WT 2-4h Xanthomonas Original data GEO bulk
609 ABA 1 h 0.25 >More info 0.57 >More info Mock 1 h Original data Basic hormone treatment of seedlings
610 AsAKiin11 T2 0.23 >More info 0.58 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
611 WT NAA 1h 0.63 >More info 0.17 >More info WT 0h Leaf tissue Original data GEO bulk
612 Truncated AC2 T2 -0.52 >More info -0.28 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
613 ANOXIA -0.57 >More info -0.23 >More info ANOXIA+SUCROSE Original data GEO bulk
614 SA 0.60 >More info 0.19 >More info WT mock Whole seedling Original data GEO bulk
615 HairpinZ 4 h (leaf) 0.82 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
616 Nicotinamide-61hr 0.55 >More info 0.23 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
617 cov1 cov2 stem Base 0.59 >More info 0.19 >More info WT stem Base stem Base Original data GEO bulk
618 pif3 Dark 0h -0.50 >More info -0.28 >More info WT Dark 0h etiolated seedling Original data GEO bulk
619 MPK6 ox Shoot Hypoxia 0.61 >More info 0.17 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
620 Aerobic e1 ate2 0.51 >More info 0.27 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
621 FLIGHT TAGESB plate 0.58 >More info 0.20 >More info GROUND CONTROL TAGESB plate Original data
622 wnk8-1 untreated -0.25 >More info -0.53 >More info Col-0 untreated seedlings Original data GEO bulk
623 12m.KCl 0.26 >More info 0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
624 nhx6 0.50 >More info 0.27 >More info WT Rosette leaf Original data GEO bulk
625 CHLM overexpression -0.25 >More info -0.52 >More info Col-0 estr green tissue Original data GEO bulk
626 Ba1 UV 0.54 >More info 0.22 >More info Ba1 mock UV seedling Original data
627 root hypoxia total 0.51 >More info 0.25 >More info root control total Original data GEO bulk
628 seedling -S Exp 0.60 >More info 0.16 >More info seedling FN Exp seedling Original data
629 Shoot dark control 24h 0.25 >More info 0.51 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
630 CeO2 germinant -0.26 >More info -0.50 >More info Millipore Water germinant CeO2 seedling Original data
631 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.60 >More info -0.15 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
632 pXVE:HA-EDM2-a untreated -0.25 >More info -0.50 >More info Col-0 untreated seedlings Original data GEO bulk
633 arr-dmso-sample 0.53 >More info 0.21 >More info Wt-dmso-sample seedling Original data
634 light -0.56 >More info -0.18 >More info dark light seedling Original data GEO bulk
635 F1 whole seedlings root 0.50 >More info 0.24 >More info Col whole seedlings root Seedlings Original data GEO bulk
636 IAA7mII over-expressor IAA Treated 0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
637 penta MeJA 1h 0.62 >More info 0.11 >More info Laer MeJA 1h leaf discs Original data GEO bulk
638 anac017-2 water 3h 0.14 >More info 0.59 >More info WT water 3h 3h_water Original data GEO bulk
639 4C 1h 0.12 >More info 0.60 >More info 4C 0h Original data GEO bulk
640 ptpks2 -0.52 >More info -0.19 >More info Col-WT leaves Original data GEO bulk
641 rosettes atx drought 0.51 >More info 0.20 >More info rosettes atx watered Original data GEO bulk
642 cop1 Seedling BL+ABA 0.50 >More info 0.21 >More info WT Seedling BL+ABA Original data GEO bulk
643 tetraploid 0.16 >More info 0.54 >More info diploid Original data GEO bulk
644 dark +H2O2 -0.20 >More info -0.50 >More info dark 5 mM H2O2 seedling Original data GEO bulk
645 Col PSTDC3000 24h 0.82 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
646 35S:RPS4 rrs1-11 24h -0.51 >More info -0.18 >More info 35S:RPS4 24h leaves Original data
647 DUO1 induced 6h -0.51 >More info -0.17 >More info 6hr-not-induced whole plant Original data GEO bulk
648 rgs1+no sugars -0.18 >More info -0.50 >More info WT+no sugars rosette leaves Original data GEO bulk
649 Prohexadione 3 h 0.14 >More info 0.53 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
650 penta Flg22 2h 0.57 >More info 0.10 >More info Laer Flg22 2h leaf discs Original data GEO bulk
651 vte2 leaves 120h LT 0.62 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
652 Bay-0-30min IAA 0.50 >More info 0.15 >More info Bay-0-0h IAA whole plant Original data GEO bulk
653 P. infestans 6 h (leaf) 0.79 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
654 triploid female excess -0.03 >More info -0.61 >More info tetraploid Original data GEO bulk
655 agb1 -ABA GC -0.13 >More info -0.50 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
656 desiccated mature pollen grains -0.04 >More info -0.59 >More info hydrated pollen grains Original data GEO bulk
657 arr10 arr12 -0.50 >More info -0.12 >More info DMSO--WT DMSO roots Original data GEO bulk
658 Mutant iaa17-6 (IAA) 0.50 >More info 0.12 >More info Col (IAA) Original data GEO bulk
659 Atwrky63 -0.54 >More info -0.07 >More info Col0 none leaf Original data GEO bulk
660 sex4-3 -0.50 >More info -0.10 >More info Col-WT leaves Original data GEO bulk
661 seedling 3h after HZE WT 0.57 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
662 sex1-3 0.07 >More info 0.50 >More info Col-WT leaves Original data GEO bulk
663 amiRAP aerobic -0.06 >More info -0.51 >More info WT aerobic aerobic Original data GEO bulk
664 Mh0 UV -0.62 >More info 0.06 >More info Mh0 mock UV seedling Original data
665 dorn1-1 Root 100 mM ATP 30 min -0.06 >More info -0.50 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
666 phosphate-starved 0.03 >More info 0.50 >More info control shoot tissue Original data GEO bulk
667 AtMYB30-ox 90-105 min Xanthomonas 0.56 >More info -0.04 >More info WT 90-105 min Xanthomonas Original data GEO bulk
668 pvip1 pvip2 seedling 0.53 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
669 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
670 penta Flg22 1h 0.57 >More info -0.14 >More info Laer Flg22 1h leaf discs Original data GEO bulk
671 xyl-grown cell culture- 1h 1mM Fru 0.09 >More info -0.51 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
672 glk1 glk2 GLK1-GR +DEX 4h 0.15 >More info -0.54 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
673 seed germinating in countinuous light 24h SL -0.31 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
674 0h hml 0.58 >More info -0.23 >More info 0h wt Original data
675 bri1-116 -0.38 >More info 0.73 >More info Col seedling Original data GEO bulk
676 Shoot apex inflorescence (after bolting) -0.48 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages