4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on toc1-1-77hr
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List of experiments correlated with "toc1-1-77hr"  Help Download transcriptome of top 30
Score Experiment Correlation from
toc1-1-77hr		 Correlation to
toc1-1-77hr		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 toc1-1-77hr 1.00 >More info 1.00 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
2 toc1-1-53hr 0.94 >More info 0.91 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
3 toc1-1-73hr 0.87 >More info 0.88 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
4 toc1-1-57hr 0.86 >More info 0.84 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
5 toc1-1-49hr 0.79 >More info 0.86 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
6 toc1-1-81hr 0.79 >More info 0.85 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
7 Nicotinamide-73hr 0.80 >More info 0.81 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
8 Nicotinamide-49hr 0.82 >More info 0.75 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
9 AgNO3 3 h 0.65 >More info 0.84 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
10 Atss3 Light1 -0.75 >More info -0.73 >More info Atss3 Dark0.5 Original data GEO bulk
11 16h Col-0 0.71 >More info 0.77 >More info 00h Col-0 Original data GEO bulk
12 Atss3 Light4 -0.73 >More info -0.72 >More info Atss3 Dark0.5 Original data GEO bulk
13 WT +Pep2 10h 0.76 >More info 0.67 >More info WT untreated Pep2 Original data GEO bulk
14 OsRLCK253 expressing -0.72 >More info -0.71 >More info WT seedlings Original data GEO bulk
15 WT +elf18 10h 0.71 >More info 0.72 >More info WT untreated elf18 Original data GEO bulk
16 Chitosan 3h Treatment 0.70 >More info 0.73 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
17 20h Col-0 0.65 >More info 0.74 >More info 00h Col-0 Original data GEO bulk
18 ceh1 mutant 0.70 >More info 0.68 >More info Parent line Original data
19 Col(gl) 0mM NaCl 0.73 >More info 0.64 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
20 Nicotinamide-53hr 0.66 >More info 0.71 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
21 Col(gl) leaf 0mM NaCl 0.73 >More info 0.64 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
22 WT cold 0.66 >More info 0.69 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
23 gh3.5-1D 48 hpi 0.66 >More info 0.69 >More info Col-0 uninoculated Original data GEO bulk
24 Mutant gh3.5-1D (AvrRpt2) 0.66 >More info 0.68 >More info Col-0 (AvrRpt2) Original data GEO bulk
25 Mutant lwd1_lwd2 0.57 >More info 0.76 >More info Wildtype for phy mutants Original data GEO bulk
26 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.57 >More info 0.76 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
27 seedlings-week-old RECA1-overexpressing
transgenic		 0.61 >More info 0.72 >More info seedlings-week-old Col-0 seedlings Original data
28 R. solani AG8 0.65 >More info 0.68 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
29 seedling 12h after Gamma atm-1 0.56 >More info 0.76 >More info seedling day 1 unirradiated atm-1 12h Original data
30 aerial organ callus inducing medium 12 h 0.63 >More info 0.69 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
31 P.p 10.5hai 0.59 >More info 0.73 >More info At-Control roots Original data GEO bulk
32 dde2-2 24hpi A. brassicicola -0.70 >More info -0.62 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
33 vtc2 (I) 0.59 >More info 0.73 >More info Col (I) rosette Original data GEO bulk
34 WT cold 12 h 0.74 >More info 0.58 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
35 R. solani AG2-1 0.60 >More info 0.71 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
36 WT 24H Cold 0.78 >More info 0.53 >More info WT control Original data GEO bulk
37 CMP 24hr 0.59 >More info 0.72 >More info Acetone 24hr root Original data GEO bulk
38 abi4 vtc2 (I) 0.60 >More info 0.71 >More info Col (I) rosette Original data GEO bulk
39 seedling 6h after HZE WT 0.68 >More info 0.62 >More info seedling day 1 unirradiated WT 6h Original data
40 MIL4 ox BTH 0.67 >More info 0.63 >More info Col BTH Original data GEO bulk
41 ice1 control 0.58 >More info 0.72 >More info WT control Original data GEO bulk
42 oas-a1.1 Cd 18h 0.60 >More info 0.70 >More info Cd 18h root Root Original data GEO bulk
43 ARR21C-ox 0.73 >More info 0.57 >More info Col-0 Original data ARR21C overexpression
44 B.cinerea 18 h infection 0.59 >More info 0.71 >More info Mock 18 h Original data Botrytis cinerea infection
45 Botrytis cinerea 18h 0.59 >More info 0.71 >More info control 18h Original data GEO bulk
46 P.p 6hai 0.60 >More info 0.69 >More info At-Control roots Original data GEO bulk
47 cdpk6-yfp 0.70 >More info 0.59 >More info Kan seedlings Original data GEO bulk
48 cpr5scv1 0.53 >More info 0.75 >More info WT(COL) Original data GEO bulk
49 Col leaf 100mM NaCl 0.65 >More info 0.63 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
50 Col leaf 100mM NaCl 0.65 >More info 0.63 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
51 Col 100mM NaCl 0.65 >More info 0.63 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
52 WT-NOCO2 INFECTED 0.55 >More info 0.73 >More info WT-MOCK Original data GEO bulk
53 RPL18 TuMV inoculated total RNA 0.63 >More info 0.65 >More info mock inoculated total RNA PO Original data GEO bulk
54 Cold Stress 24 h (shoot) 0.68 >More info 0.60 >More info Stress mock 24 h (shoot) Original data Stress treatments
55 Col whole leaf 5dpi 0.55 >More info 0.73 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
56 M6PR transgenic 0mM NaCl 0.68 >More info 0.59 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
57 SOS1 0mM NaCl 0.65 >More info 0.62 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
58 Nicotinamide-69hr 0.61 >More info 0.66 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
59 ein2-1 24hpi A. brassicicola -0.68 >More info -0.59 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
60 P.p 30hai 0.60 >More info 0.67 >More info At-Control roots Original data GEO bulk
61 AvrRpt2 Col-0 6hpi 0.61 >More info 0.65 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
62 Col leaves 48h LT 0.62 >More info 0.64 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
63 seedling 12h after HZE WT 0.62 >More info 0.64 >More info seedling day 1 unirradiated WT 12h Original data
64 CMP 4hr 0.56 >More info 0.70 >More info Acetone 4hr root Original data GEO bulk
65 Cor hrpS 10h 0.49 >More info 0.77 >More info Mock 10h Cor hrpS Original data GEO bulk
66 Botrytis cinerea 48h 0.50 >More info 0.75 >More info control 48h Original data GEO bulk
67 BLM+INA 0.68 >More info 0.57 >More info CK BLM and INA seedling Original data
68 08h Col-0 0.63 >More info 0.62 >More info 00h Col-0 Original data GEO bulk
69 Chemically 0.57 >More info 0.68 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
70 ice1 6H Cold 0.54 >More info 0.70 >More info WT 6H Cold Original data GEO bulk
71 toc1-1-93hr 0.54 >More info 0.70 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
72 Leafminer locally damaged thaliana seedlings 0.51 >More info 0.72 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
73 seedling 12h after Gamma WT 0.56 >More info 0.67 >More info seedling day 1 unirradiated WT 12h Original data
74 erf5 erf6 -0.62 >More info -0.61 >More info WT+water water seedlings Original data GEO bulk
75 9 hr Hypoxia 1 hr recovery Total RNA 0.67 >More info 0.56 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
76 12h Col-0 0.62 >More info 0.61 >More info 00h Col-0 Original data GEO bulk
77 noa1-2 0.77 >More info 0.46 >More info Col-0 whole seedlings Original data GEO bulk
78 wavy 0.54 >More info 0.68 >More info WT Original data GEO bulk
79 Col-0 INA 6d 0.66 >More info 0.56 >More info Col-0 MOCK 6d Original data GEO bulk
80 Cd 18h root -0.60 >More info -0.62 >More info WT-Untreated Root Original data GEO bulk
81 Nicotinamide-93hr 0.59 >More info 0.63 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
82 cpr5npr1svi1 0.51 >More info 0.71 >More info WT(COL) Original data GEO bulk
83 9 hr Hypoxia Total RNA 0.71 >More info 0.51 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
84 flu 0.50 >More info 0.71 >More info WT Col Original data GEO bulk
85 WT+H2O2 0.50 >More info 0.71 >More info WT H2O2 Original data GEO bulk
86 UV Stress 24 h (shoot) 0.52 >More info 0.69 >More info Stress mock 24 h (shoot) Original data Stress treatments
87 Sulfometuron EC50 0.56 >More info 0.65 >More info Carrier Original data GEO bulk
88 M6PR transgenic leaf 0mM NaCl 0.65 >More info 0.56 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
89 ARR22-ox (t-zeatin 3 h) 0.59 >More info 0.62 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
90 GST 4 h (leaf) 0.48 >More info 0.73 >More info Mock 4 h (leaf) Original data Elicitor treatments
91 LTN008-2 aza-dc 0.55 >More info 0.65 >More info LTN012-2 Mock Original data
92 vte1-1 3d vernalization -0.78 >More info -0.42 >More info WT 3d vernalization Original data GEO bulk
93 OsSAP11 expressing -0.59 >More info -0.61 >More info WT seedlings Original data GEO bulk
94 mkk1/mkk2 24h BTH rep 0.51 >More info 0.69 >More info Col-0 24h BTH rep Original data GEO bulk
95 Laer pretreat GA Flg22 1h 0.49 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
96 RPL18 TuMV inoculated polysomal RNA 0.56 >More info 0.63 >More info mock inoculated polysomal RNA PO Original data GEO bulk
97 35S::PI ap3-3 35S::AP-GR +DEX 0.57 >More info 0.62 >More info 0hr DEX Original data GEO bulk
98 9m.KCl 0.59 >More info 0.60 >More info To. KCl 14 day old Roots Original data GEO bulk
99 4d red light grown hmr-5 seedlings 0.68 >More info 0.51 >More info 4d red light grown WT(Col-0) seedlings Original data
100 toc1-1-61hr 0.47 >More info 0.72 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
101 sid2-2 24hpi A. brassicicola -0.65 >More info -0.53 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
102 seedling 1.5h after HZE WT 0.73 >More info 0.45 >More info seedling day 1 unirradiated WT 1.5h Original data
103 A. thaliana-A. lyrata hybrid -0.60 >More info -0.58 >More info A. thaliana mature leaves before flowering Original data GEO bulk
104 seedlings protease IV 0.48 >More info 0.70 >More info seedlings nontreated control whole seedling Original data
105 chito-tetramer 0.50 >More info 0.67 >More info Col Mock Original data GEO bulk
106 Primisulfuron EC50 0.55 >More info 0.62 >More info Carrier (primisulfuron) Original data GEO bulk
107 WT cold 24h 0.68 >More info 0.49 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
108 Shoot dark control 7h 0.63 >More info 0.54 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
109 Col whole leaf 5 dpi 0.58 >More info 0.59 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
110 WT 6H Cold 0.69 >More info 0.48 >More info WT control Original data GEO bulk
111 Heat shock optimum 0.52 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
112 CMV-WT 0.49 >More info 0.68 >More info Mock-At Aerial tissues Original data GEO bulk
113 seedling 12h after HZE atm-1 0.46 >More info 0.71 >More info seedling day 1 unirradiated atm-1 12h Original data
114 Nicotinamide-77hr 0.64 >More info 0.52 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
115 bak1-3 +Pep2 10h 0.50 >More info 0.66 >More info WT +Pep2 10h Pep2 Original data GEO bulk
116 seedling 6h after HZE atm-1 0.54 >More info 0.62 >More info seedling day 1 unirradiated atm-1 6h Original data
117 WT 30μM arsenate 8 hours. 0.60 >More info 0.56 >More info WT control (not supplemented). Original data
118 sta1 0.58 >More info 0.58 >More info WT Original data GEO bulk
119 WT Na2S -0.57 >More info -0.59 >More info WT water Na2S leaf Original data GEO bulk
120 pepr1-1 Pepr2-3 +Pep2 2h -0.42 >More info -0.74 >More info WT +Pep2 2h Pep2 Original data GEO bulk
121 camta3-1 0.52 >More info 0.63 >More info WT Original data GEO bulk
122 abi4-102 (I) 0.53 >More info 0.62 >More info Col (I) rosette Original data GEO bulk
123 Col-0 48 hpi 0.52 >More info 0.63 >More info Col-0 uninoculated Original data GEO bulk
124 seedling 1.5h after HZE atm-1 0.63 >More info 0.52 >More info seedling day 1 unirradiated atm-1 1.5h Original data
125 root Dosed gold 0.54 >More info 0.61 >More info root No gold .125 mM gold 24 h roots Original data
126 0.125 mM gold 24 h 0.54 >More info 0.61 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
127 flu over-tAPX 0.43 >More info 0.72 >More info WT Col Original data GEO bulk
128 OH1 0.49 >More info 0.66 >More info Col-0 leaves Original data GEO bulk
129 Col-0 under 4 days salt 0.47 >More info 0.68 >More info Col-0 under control 4 days salt treatment rosette Original data
130 Root dark control 7h 0.67 >More info 0.47 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
131 camta1/3 warm 0.51 >More info 0.63 >More info WT warm entire aerial part Original data GEO bulk
132 Root dark control 24h 0.68 >More info 0.46 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
133 Laer Flg22(Agrobacterium) 2h 0.54 >More info 0.60 >More info Laer Control leaf discs Original data GEO bulk
134 iae1 -0.62 >More info -0.52 >More info B179 Original data GEO bulk
135 Fenclorim 4hr 0.48 >More info 0.66 >More info Acetone 4hr root Original data GEO bulk
136 Col-0 V. longisporum-inoculated 48 hpi 0.38 >More info 0.76 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
137 Mutant axr3-1 (IAA) 0.57 >More info 0.57 >More info Col (IAA) Original data GEO bulk
138 SA 0.55 >More info 0.58 >More info WT mock Whole seedling Original data GEO bulk
139 Dark 6h ivd 0.57 >More info 0.56 >More info 0h ivd Original data
140 D2O 0.43 >More info 0.70 >More info H2O seedling Original data GEO bulk
141 Cd 24h root -0.48 >More info -0.65 >More info WT-Untreated Shoot Original data GEO bulk
142 Imidazolinone EC50 0.51 >More info 0.61 >More info Carrier (Imidazolinone) Original data GEO bulk
143 Ws 100mM NaCl 0.54 >More info 0.58 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
144 Ws leaf 100mM NaCl 0.54 >More info 0.58 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
145 vte2-1 3d vernalization 0.57 >More info 0.55 >More info WT 3d vernalization Original data GEO bulk
146 oas-a1.1 Cd 24h 0.45 >More info 0.67 >More info Cd 24h root Shoot Original data GEO bulk
147 camta2/3 warm 0.46 >More info 0.66 >More info WT warm entire aerial part Original data GEO bulk
148 Root submergence 7h 0.65 >More info 0.46 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
149 INA 0.53 >More info 0.58 >More info CK INA seedling Original data
150 Dark 3day ivd 0.59 >More info 0.52 >More info 0h ivd Original data
151 pvip1 pvip2 0.49 >More info 0.62 >More info Col-0 whole rosettes Original data GEO bulk
152 seedlings +5AC 0.49 >More info 0.62 >More info control seedlings 10-day old whole seedling Original data GEO bulk
153 6h +Pi -0.49 >More info -0.62 >More info 6h -Pi root Original data GEO bulk
154 hst5 0.70 >More info 0.40 >More info Col-0 Original data GEO bulk
155 aerial organ callus inducing medium 24h 0.53 >More info 0.57 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
156 Root submergence 24h 0.64 >More info 0.45 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
157 5-Triiodobenzoic acid3 h 0.46 >More info 0.63 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
158 Mutant arf2 (etiol) 0.45 >More info 0.64 >More info Col (etiol) Original data GEO bulk
159 arf2 mock 0.45 >More info 0.64 >More info Col mock Original data GEO bulk
160 RGA-GR-DEX 0.48 >More info 0.61 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
161 cca1-lhy 60m light 0.47 >More info 0.62 >More info 60m light whole seedlings Original data GEO bulk
162 sni1 0.38 >More info 0.71 >More info WT Original data GEO bulk
163 S58-2 0.37 >More info 0.72 >More info wt Original data GEO bulk
164 Osmotic Stress 24 h (shoot) 0.50 >More info 0.58 >More info Stress mock 24 h (shoot) Original data Stress treatments
165 9 hr Hypoxia IP RNA 0.61 >More info 0.47 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
166 8 hr ammonium 0.58 >More info 0.50 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
167 Leafminer damaged seedlings 0.51 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
168 Leaf GLU1-KO 0.61 >More info 0.46 >More info Leaf Col(0) rosette leaves Original data GEO bulk
169 Mutant axr3-1 0.53 >More info 0.54 >More info Col Original data GEO bulk
170 apum23 0.64 >More info 0.43 >More info WT (Col-3) aerial parts Original data GEO bulk
171 pad4-est1b-1-doublemutant 0.62 >More info 0.45 >More info pad4-mutant developed rosette leaves Original data GEO bulk
172 cpr5npr1 0.42 >More info 0.65 >More info WT(COL) Original data GEO bulk
173 ABA control 0.62 >More info 0.44 >More info No ABA control Original data GEO bulk
174 Atss3 Dark8 -0.60 >More info -0.46 >More info Atss3 Dark0.5 Original data GEO bulk
175 chito-octamer 0.39 >More info 0.67 >More info Col Mock Original data GEO bulk
176 WT +elf18 2h 0.39 >More info 0.67 >More info WT untreated elf18 Original data GEO bulk
177 SLWF infested 0.40 >More info 0.66 >More info SLWF uninfested rosette tissue Original data GEO bulk
178 Elevated CO2 AMPLE N DAY 0.35 >More info 0.71 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
179 tt4 0.48 >More info 0.58 >More info Col-0 aerial part Original data
180 9 hr Hypoxia 1 hr recovery IP RNA 0.60 >More info 0.45 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
181 4C 1h 0.49 >More info 0.56 >More info 4C 0h Original data GEO bulk
182 atmyc2 cop1 Seedling BL 0.40 >More info 0.65 >More info WT Seedling BL Original data GEO bulk
183 mil4 BTH 0.41 >More info 0.64 >More info Col BTH rosettes Original data GEO bulk
184 ERF96OE 0.47 >More info 0.58 >More info WT leaf Original data
185 embryo paclobutrazol 0.60 >More info 0.44 >More info embryo-control paclobutrazol embryo Original data GEO bulk
186 pap1-D/tt4 0.59 >More info 0.45 >More info Col-0 aerial part Original data
187 MIL4 ox 0.62 >More info 0.42 >More info Col Original data GEO bulk
188 Lipopolysaccaride4 h (leaf) 0.43 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
189 mkk2 24h BTH rep 0.39 >More info 0.65 >More info Col-0 24h BTH rep Original data GEO bulk
190 mkk1/mkk2 control rep 0.40 >More info 0.64 >More info Col-0 Time 0 rep Original data GEO bulk
191 Col-0 C2H4 24h 0.49 >More info 0.55 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
192 cop1 Seedling BL 0.38 >More info 0.66 >More info WT Seedling BL Original data GEO bulk
193 Col BTH 0.37 >More info 0.67 >More info Col rosettes Original data GEO bulk
194 Elevated CO2 AMPLE N NIGHT 0.38 >More info 0.66 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
195 hyl1 0.63 >More info 0.40 >More info Col-0 Original data GEO bulk
196 Dark 3day hml 0.61 >More info 0.42 >More info 0h hml Original data
197 Cycloheximide 3 h 0.38 >More info 0.65 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
198 Phytoprostane A1 4 h 0.46 >More info 0.57 >More info Col-0 Original data GEO bulk
199 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.42 >More info 0.61 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
200 rosette Dark Wounded 0.35 >More info 0.68 >More info rosette Dark Control Original data GEO bulk
201 TNT-seedlings 0.28 >More info 0.75 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
202 WT powdery mildew 0.40 >More info 0.63 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
203 camta1/2/3 warm 0.36 >More info 0.67 >More info WT warm entire aerial part Original data GEO bulk
204 ani1 T0.5 -0.40 >More info -0.63 >More info WT T0.5 root tissue Original data GEO bulk
205 Cocultivation 8 hrs root 0.50 >More info 0.52 >More info Mock cocultivation 8 hrs root Root Original data
206 Nicotinamide-81hr 0.39 >More info 0.63 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
207 bri1-116 0.29 >More info 0.73 >More info Col seedling Original data GEO bulk
208 csn5 (csn5a-2 csn5b) light 0.46 >More info 0.56 >More info WT light Original data GEO bulk
209 hira-root -0.43 >More info -0.59 >More info WT-root root Original data
210 GR-REV 30min 0.59 >More info 0.42 >More info Col 30min Original data GEO bulk
211 rdr1-1 -0.60 >More info -0.41 >More info Col-0 Original data GEO bulk
212 MYB12OX/tt4 0.58 >More info 0.43 >More info Col-0 aerial part Original data
213 clf-28 swn-7 0.55 >More info 0.46 >More info Col whole plant Original data GEO bulk
214 gai Control 0.53 >More info 0.48 >More info Laer Control leaf discs Original data GEO bulk
215 embryo ABA 0.55 >More info 0.46 >More info embryo-control ABA embryo Original data GEO bulk
216 P.syringae AvrRpt2 4 h (leaf) 0.42 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
217 Laer treat paclobutrazol (PAC) 0.46 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
218 Col-0-avrB-6h 0.36 >More info 0.65 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
219 Col-0 low oxygen 0.45 >More info 0.56 >More info Col-0 control low oxygen root Original data GEO bulk
220 smg7b-1 0.35 >More info 0.66 >More info WT whole plant Original data GEO bulk
221 abi1 hypocotyl 0.44 >More info 0.57 >More info Ler hypocotyl hypocotyl Original data GEO bulk
222 arr-dmso-sample 0.59 >More info 0.41 >More info Wt-dmso-sample seedling Original data
223 rao1-1 3h antimycin A -0.52 >More info -0.48 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
224 SPT4-R3 seedlings0 DAS 0.50 >More info 0.50 >More info Col-0 seedlings0 DAS seedlings Original data
225 AmGSTF1 expressor 0.53 >More info 0.47 >More info WT leaf tissue Original data GEO bulk
226 Heat 2 days recovery 0.63 >More info 0.37 >More info Mock 2 days recovery seedling Original data GEO bulk
227 Shoot apex inflorescence (after bolting) 0.35 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
228 DC3000 2 h (leaf) 0.36 >More info 0.64 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
229 Col whole leaf 7dpi 0.29 >More info 0.71 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
230 Col0-PsmES4326-24hpi 0.39 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
231 Starch sheath 5 days MS incubation 0.46 >More info 0.54 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
232 aerial organ callus inducing medium 48 h 0.49 >More info 0.51 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
233 WT AntimycinA 3h 0.36 >More info 0.64 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
234 4C 7d(SOIL) 0.48 >More info 0.52 >More info 4C 0h(SOIL) Original data GEO bulk
235 Shoot dark control 24h 0.54 >More info 0.45 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
236 Dark 3day wt 0.57 >More info 0.42 >More info 0h wt Original data
237 Shoot submergence 24h 0.51 >More info 0.48 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
238 CMV-A2b mutant 0.53 >More info 0.46 >More info Mock-At Aerial tissues Original data GEO bulk
239 4h decapitation -0.54 >More info -0.45 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
240 til1-1 22C 0.45 >More info 0.54 >More info Col-0 22C Original data GEO bulk
241 RRE2 Chitin 0.45 >More info 0.54 >More info Chitin Original data GEO bulk
242 hrpA 7h 0.23 >More info 0.76 >More info Mock 7h hrpA Original data GEO bulk
243 aba3-1 0.34 >More info 0.65 >More info wt Original data GEO bulk
244 del1-1 mutant 5d uninfected 0.19 >More info 0.80 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
245 plant (Col-0) 4h OPDA 0.57 >More info 0.41 >More info plant (Col-0) 4h control Original data GEO bulk
246 Pseudomonas 0.59 >More info 0.39 >More info Control pseudomonas treated whole seedling Original data GEO bulk
247 OPDA 4 h 0.57 >More info 0.41 >More info Col-0 Original data GEO bulk
248 atmospheric CO2 low Mg shoot 0.55 >More info 0.43 >More info atmospheric CO2 normal Mg shoot Shoot Original data
249 dicamba 0.52 >More info 0.46 >More info WT mock whole seedling Original data GEO bulk
250 CT101 ozone 0.38 >More info 0.60 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
251 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.38 >More info 0.60 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
252 eds16 whole leaf 6hpi -0.34 >More info -0.64 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
253 WT-16ºC -0.48 >More info -0.50 >More info WT-23ºC Original data GEO bulk
254 toc1-1-69hr 0.43 >More info 0.55 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
255 15m.KCl 0.47 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
256 pmr4-1 powdery mildew 0.40 >More info 0.58 >More info WT powdery mildew uninoculated Original data GEO bulk
257 +1.6 mM Tween 20 1 h. 0.37 >More info 0.61 >More info +distilled water 1 h. Original data GEO bulk
258 cpr5 0.35 >More info 0.63 >More info WT(COL) Original data GEO bulk
259 WT chitooctaose 0.39 >More info 0.59 >More info WT water Original data GEO bulk
260 pmr5 0.28 >More info 0.70 >More info Col-0 Original data GEO bulk
261 CeO2 germinant -0.23 >More info -0.75 >More info Millipore Water germinant CeO2 seedling Original data
262 max3GR24 (1 uM) -0.67 >More info -0.30 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
263 Dark 2day hml 0.61 >More info 0.36 >More info 0h hml Original data
264 Cold Stress 24 h (root) 0.58 >More info 0.39 >More info Stress mock 24 h (root) Original data Stress treatments
265 gul2-1 mutant 0.54 >More info 0.43 >More info WT 7 day-old whole seedlings Original data
266 Phaseolicola 2 h (leaf) 0.25 >More info 0.72 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
267 Triazolopyrimidine EC50 0.39 >More info 0.58 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
268 Glyphosate EC50 0.47 >More info 0.50 >More info Carrier (Glyphosate) Original data GEO bulk
269 pmr5 pmr6 0.26 >More info 0.71 >More info Col-0 Original data GEO bulk
270 IRP1-OE-Fe--shoot 0.31 >More info 0.66 >More info COL-0-Fe--shoot shoot Original data
271 Laer pretreat GA Flg22 2h 0.56 >More info 0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
272 roottip hypoxia total 0.40 >More info 0.56 >More info roottip control total Original data GEO bulk
273 mil4 sid2 0.55 >More info 0.41 >More info Col rosettes Original data GEO bulk
274 SOS1 100mM NaCl 0.53 >More info 0.43 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
275 pkl-1 0.65 >More info 0.31 >More info WT whole seedling Original data GEO bulk
276 root epidermis and lateral root cap 40 mM NaCl 0.54 >More info 0.42 >More info root epidermis and lateral root cap Original data GEO bulk
277 whole roots -Fe 48 hour 0.46 >More info 0.50 >More info whole roots standard Original data GEO bulk
278 Anoxia 0.43 >More info 0.53 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
279 nia1nia2 0.46 >More info 0.50 >More info Col-0 whole seedlings Original data GEO bulk
280 35S:RPS4 eds1-2 24h -0.29 >More info -0.67 >More info 35S:RPS4 24h leaves Original data
281 aba2 1% sucrose 12-day-old 0.44 >More info 0.51 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
282 pip3 At2g19270 RNAi 24 -0.42 >More info -0.53 >More info Nd-1 whole plant Original data GEO bulk
283 Stem tissue 2 days NAA 0.42 >More info 0.53 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
284 edr1 18 h powdery mildew 0.31 >More info 0.64 >More info Col-0 18 h powdery mildew Original data GEO bulk
285 camta1-2 0.37 >More info 0.58 >More info Col-0-WT Original data GEO bulk
286 col-5 hrpA 12h 0.25 >More info 0.70 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
287 spx1 spx2 complete 0.56 >More info 0.38 >More info WT complete seedlings Original data
288 phyB mutant 16C 4hrs 0.68 >More info 0.26 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
289 toc1-1-85hr 0.28 >More info 0.66 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
290 Wounding Stress3 h (root) -0.58 >More info -0.36 >More info Stress mock 3 h (root) Original data Stress treatments
291 GA4 3 h (ga1 seed) 0.58 >More info 0.36 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
292 glk1 glk2 GLK1-GR +DEX 24h -0.52 >More info -0.42 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
293 coi1-16 ein2 sid2 ctrl -0.35 >More info -0.59 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
294 HSP90 Reduced RNAi-C1 0.56 >More info 0.37 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
295 Dark 2day wt 0.56 >More info 0.37 >More info 0h wt Original data
296 Col-0 ozone 0.38 >More info 0.55 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
297 AFB1 flg22 2h 0.40 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
298 pepr1-1 Pepr2-3 +Pep2 10h -0.27 >More info -0.66 >More info WT +Pep2 10h Pep2 Original data GEO bulk
299 anac017-2 AntimycinA 3h -0.28 >More info -0.65 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
300 ein2 0.60 >More info 0.33 >More info Col-0 Leaves Original data GEO bulk
301 sdg2 0.60 >More info 0.33 >More info wt seedling Original data GEO bulk
302 Te ozone 0.33 >More info 0.60 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
303 miR393 flg22 2h 0.33 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
304 hrcC 0.22 >More info 0.71 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
305 oligomycin 1 h 0.43 >More info 0.50 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
306 S15-118 0.23 >More info 0.70 >More info wt Original data GEO bulk
307 npr1-3 DCA 48h 0.37 >More info 0.55 >More info npr1-3 MOCK 48h Original data GEO bulk
308 HARAP aerobic -0.40 >More info -0.52 >More info WT aerobic aerobic Original data GEO bulk
309 SA 4mM 0.51 >More info 0.41 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
310 Laer Flg22 2h 0.30 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
311 oligomycin 4 h 0.32 >More info 0.60 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
312 shoot-10 μM DEX- 6 hr 0.35 >More info 0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
313 GST NPP1 4 h (leaf) 0.23 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
314 Nicotinamide-65hr 0.40 >More info 0.51 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
315 Nicotinamide-57hr 0.26 >More info 0.65 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
316 DFPM 0.25 >More info 0.66 >More info control Original data GEO bulk
317 Col ozone 2d 0.25 >More info 0.66 >More info Col clean-air 2d ozone Original data GEO bulk
318 Rose Bengal 0.5 uM 0.36 >More info 0.55 >More info Control RB and PER Rose Bengal Original data
319 vte1-1 1d vernalization 0.50 >More info 0.41 >More info WT 1d vernalization Original data GEO bulk
320 pad4-PsmES4326-24hpi -0.34 >More info -0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
321 ice1 3H Cold 0.33 >More info 0.58 >More info WT 3H Cold Original data GEO bulk
322 WT 3H Cold 0.33 >More info 0.58 >More info WT control Original data GEO bulk
323 plant (tga2-5-6) 4h OPDA 0.50 >More info 0.40 >More info plant (tga2-5-6) 4h control Original data GEO bulk
324 Laer Flg22+GA 2h 0.35 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
325 CLO 4mM 0.37 >More info 0.53 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
326 Whole root - low pH 12H 0.35 >More info 0.55 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
327 Cor 10h 0.24 >More info 0.66 >More info Mock 10h Cor Original data GEO bulk
328 Dark 1day ivd 0.57 >More info 0.33 >More info 0h ivd Original data
329 Col upon hypoxia 6 hrs 0.32 >More info 0.58 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
330 Dark 6h hml 0.54 >More info 0.35 >More info 0h hml Original data
331 HSP90 Reduced RNAi-B1 0.61 >More info 0.28 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
332 K starvation (root) 0.51 >More info 0.38 >More info Ws (root) Original data GEO bulk
333 Root -K 0.51 >More info 0.38 >More info Control-root Original data GEO bulk
334 WT flg22 2h 0.37 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
335 2xX4x interploidy cross 0.58 >More info 0.31 >More info 2xX2x cross Original data GEO bulk
336 PIF5ox high R/FR 0.60 >More info 0.29 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
337 1 h Light IP RNA -0.32 >More info -0.56 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
338 whole roots 140 mM NaCl 1 hour 0.35 >More info 0.53 >More info whole roots standard Original data GEO bulk
339 BI-1-30min IAA -0.57 >More info -0.31 >More info BI-1-0h IAA whole plant Original data GEO bulk
340 Dark 1day wt 0.58 >More info 0.30 >More info 0h wt Original data
341 Dark 6h wt 0.53 >More info 0.34 >More info 0h wt Original data
342 CBF3 0mM NaCl 0.61 >More info 0.26 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
343 arf2 brz -0.27 >More info -0.60 >More info arf2 mock Original data GEO bulk
344 miR393 0h -0.21 >More info -0.66 >More info WT 0h Leaf tissue Original data GEO bulk
345 KCl germinant -0.37 >More info -0.50 >More info Millipore Water germinant KCl seedling Original data
346 hepta mutant (higher order mutant) 0.53 >More info 0.33 >More info col control (higher order mutant) Original data GEO bulk
347 WT (Col-0) inflorescence drought day 10 0.58 >More info 0.28 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
348 ataf1-1 mutant Col-0 Bgh inoculated 0.17 >More info 0.69 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
349 8hr-pH4.5 0.25 >More info 0.61 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
350 ckh1 CK200 0.36 >More info 0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
351 opr3 OPDA 2 h 0.25 >More info 0.61 >More info opr3 0 h Original data GEO bulk
352 46T-CK 0.22 >More info 0.64 >More info WT-CK none Original data
353 roots bhlh100/101 0uM Fe 0.52 >More info 0.33 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
354 npr1-3 MOCK 48h -0.67 >More info -0.18 >More info Col-0 MOCK 48h Original data GEO bulk
355 ms1 unpollinated -0.60 >More info -0.25 >More info WT 8h-pollinated pistil Original data GEO bulk
356 indRKD4ox 0.60 >More info 0.25 >More info Control (35S-GVG) seedlings Original data GEO bulk
357 Shoot -Cs 0.09 >More info 0.76 >More info Control-shoot Original data GEO bulk
358 Dark 1day hml 0.54 >More info 0.30 >More info 0h hml Original data
359 HSP90 Reduced RNAi-A2 0.56 >More info 0.28 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
360 dor drought 0.29 >More info 0.55 >More info WT drought Original data GEO bulk
361 Col-0 Flg22 4h 0.28 >More info 0.56 >More info Col-0 H2O 4h Original data GEO bulk
362 WT-SA 0.16 >More info 0.68 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
363 E.coli TUV86 2 fliC 7h 0.18 >More info 0.66 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
364 root protoplasts 40 mM NaCl 0.30 >More info 0.54 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
365 GO5; 8h switch to ambient CO2 concentrations; 0.28 >More info 0.56 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
366 phr1 phl1 Shoot-Pi 0.61 >More info 0.23 >More info WT Shoot-Pi shoots Original data GEO bulk
367 9m.KNO3 0.26 >More info 0.58 >More info To. KNO3 14 day old Roots Original data GEO bulk
368 IMI 4mM 0.15 >More info 0.69 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
369 AtLysM RLK1 mutant water 0.51 >More info 0.32 >More info WT water Original data GEO bulk
370 anti-sense for AtAOX1a 0.52 >More info 0.31 >More info WT Original data GEO bulk
371 wrky33 Bc inoculation 14h 0.31 >More info 0.52 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
372 E.coli 0157 H7 7h 0.16 >More info 0.67 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
373 an3-4 leaf primordia 0.59 >More info 0.24 >More info WT leaf primordia Original data GEO bulk
374 Col-0 DCA 48h 0.21 >More info 0.62 >More info Col-0 MOCK 48h Original data GEO bulk
375 msh1 albino 0.23 >More info 0.60 >More info WT aerial part Original data GEO bulk
376 col-5 DC3000 12h 0.23 >More info 0.60 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
377 Col-0 9 hpi A. brassicicola 0.12 >More info 0.71 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
378 root cells endodermis 140mM NaCl 3 hours 0.50 >More info 0.32 >More info root cells endodermis standard 1 hour root cells endodermis Original data
379 frb1 mutant 0.55 >More info 0.27 >More info WT whole seedling Original data GEO bulk
380 FLIGHT TAGESB plate 0.67 >More info 0.15 >More info GROUND CONTROL TAGESB plate Original data
381 npr1-PsmES4326-24hpi -0.30 >More info -0.52 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
382 coi1-2 0.27 >More info 0.55 >More info Col-0 mock Whole seedling Original data GEO bulk
383 OE WRKY63.3 high light 0.31 >More info 0.51 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
384 DC3000 24h 0.26 >More info 0.56 >More info Mock 24h DC3000 Original data GEO bulk
385 Cor 24h 0.19 >More info 0.63 >More info Mock 24h Cor Original data GEO bulk
386 35S::LFY 0.26 >More info 0.56 >More info Landsberg erecta seedlings Original data GEO bulk
387 xyl-grown cell culture- 1h 1mM Fru -0.30 >More info -0.52 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
388 shoot-10 μM DEX- 12 hr 0.31 >More info 0.51 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
389 Mutant nph4-1_arf19-1 0.58 >More info 0.24 >More info Col Original data GEO bulk
390 Col whole leaf amplified 5 dpi 0.21 >More info 0.61 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
391 ALC Toc1 light-dark EtOH -0.51 >More info -0.30 >More info Col light-dark EtOH 2.5% ethanol Original data GEO bulk
392 sdg8-2 mutant -0.55 >More info -0.26 >More info wild type leaf Original data GEO bulk
393 Flagellin 4 h (leaf) 0.17 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
394 CAX1/CAX3 mutant 0.28 >More info 0.53 >More info Col whole plant Original data GEO bulk
395 pnp1-1 3h +P 0.21 >More info 0.60 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
396 RRE1 Chitin 0.51 >More info 0.29 >More info Chitin Original data GEO bulk
397 oxt6:AtCPSF30 line 0.55 >More info 0.25 >More info oxt6 mutant Original data GEO bulk
398 root longitudinal zone-4 NaCl 0.50 >More info 0.30 >More info root longitudinal zone-4 Original data GEO bulk
399 root cells epidermis 140mM NaCl 48 hours 0.52 >More info 0.28 >More info root cells epidermis standard 1 hour root cells epidermis Original data
400 mutant acs6E (single mutant) -0.60 >More info -0.20 >More info col control (single mutant) Original data GEO bulk
401 Mutant siz1-3 0.19 >More info 0.61 >More info Col-0 Original data GEO bulk
402 Protoplast Induced 0.18 >More info 0.62 >More info Uninduced Original data GEO bulk
403 petiole in D 0.24 >More info 0.56 >More info petiole in WL petioles Original data GEO bulk
404 root longitudinal zone-4 pH 4.6 0.28 >More info 0.52 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
405 rcf1-1 cold 0h 0.25 >More info 0.55 >More info WT cold 0h Control seedlings Original data GEO bulk
406 cpr5 0.20 >More info 0.60 >More info WT seedling Original data GEO bulk
407 Cs shoot -0.28 >More info -0.52 >More info control shoot Original data GEO bulk
408 siz1-3 control 0.19 >More info 0.61 >More info Col-0 control Original data GEO bulk
409 sid2-2 9 hpi A. brassicicola 0.20 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
410 WT Bc inoculation 14h 0.22 >More info 0.58 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
411 light -0.61 >More info -0.18 >More info dark light seedling Original data GEO bulk
412 Salt Stress 24 h (root) 0.26 >More info 0.53 >More info Stress mock 24 h (root) Original data Stress treatments
413 coi1-16 ein2 sid2 ozone 0.26 >More info 0.53 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
414 rosette Light Wounded 0.15 >More info 0.64 >More info rosette Light Control Original data GEO bulk
415 scrm-D 0.23 >More info 0.56 >More info Col-0 WT whole seedling Original data GEO bulk
416 Pst-DC3000(avrRpm1)-4hpi 0.19 >More info 0.60 >More info Pst-DC3000-4hpi Original data GEO bulk
417 hen1 -0.61 >More info -0.17 >More info Ler Original data GEO bulk
418 root cells endodermis 140mM NaCl 8 hours 0.53 >More info 0.25 >More info root cells endodermis standard 1 hour root cells endodermis Original data
419 Root P recovery 0.53 >More info 0.25 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
420 M6PR transgenic leaf 100mM NaCl -0.50 >More info -0.28 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
421 root cells epidermis 140mM NaCl 3 hours 0.52 >More info 0.26 >More info root cells epidermis standard 1 hour root cells epidermis Original data
422 root cells endodermis 140mM NaCl 48 hours 0.50 >More info 0.28 >More info root cells endodermis standard 1 hour root cells endodermis Original data
423 Col-0 INA 48h 0.15 >More info 0.63 >More info Col-0 MOCK 48h Original data GEO bulk
424 ein2-1 9 hpi A. brassicicola 0.09 >More info 0.69 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
425 AvrRpm1 2 h (leaf) 0.18 >More info 0.59 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
426 C24 ozone 0.26 >More info 0.51 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
427 gpa1 -ABA GC -0.17 >More info -0.60 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
428 P.p 2.5hai 0.05 >More info 0.72 >More info At-Control roots Original data GEO bulk
429 npr1 sni1 SA 0.22 >More info 0.55 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
430 camta1/2/3 24h cold 0.18 >More info 0.59 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
431 sid2-1 cold -0.12 >More info -0.65 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
432 Leafminer systemically damaged thaliana seedlings 0.21 >More info 0.56 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
433 npr1-1 SA -0.25 >More info -0.52 >More info Col-0 SA complete seedling Original data
434 gun1gun5 drak pretreated 0.55 >More info 0.21 >More info WT drak pretreated Original data GEO bulk
435 hsfa2 KO heat shock 0.64 >More info 0.12 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
436 Starch sheath 2 days NAA 0.53 >More info 0.23 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
437 35S-MIF1 light grown 0.25 >More info 0.51 >More info Light-grown WT control Original data GEO bulk
438 Col-0 flu HL 3h 0.19 >More info 0.57 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
439 WT (Col-0) inflorescence moderate drought day 3 0.56 >More info 0.19 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
440 elevated CO2 high Mg root -0.50 >More info -0.25 >More info atmospheric CO2 high Mg root Root Original data
441 gai Flg22 1h 0.53 >More info 0.22 >More info Laer Flg22 1h leaf discs Original data GEO bulk
442 rao2 water 3h -0.61 >More info -0.14 >More info WT water 3h 3h_water Original data GEO bulk
443 PRR5-VP 6h light on 0.53 >More info 0.22 >More info WT 6h light on whole plant Original data GEO bulk
444 8h-DC3000 avrRpm1 0.19 >More info 0.56 >More info 8h-DC3000 leaves Original data GEO bulk
445 HRE1-RNAi20 normoxia -0.21 >More info -0.54 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
446 Mature callus 0.15 >More info 0.60 >More info Young callus hypocotyls Original data GEO bulk
447 seed germinating in countinuous light 24h SL 0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
448 bHLH122 ox -0.22 >More info -0.53 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
449 atmyc2 Seedling BL 0.62 >More info 0.12 >More info WT Seedling BL Original data GEO bulk
450 del1-1 5dpi 0.54 >More info 0.20 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
451 hsfa2 KO 0.64 >More info 0.10 >More info WT (Col-0) whole seedling Original data GEO bulk
452 seedling 3h after HZE WT 0.72 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
453 Mutant siz1-3 (Drought) 0.13 >More info 0.61 >More info Col-0 (Drought) Original data GEO bulk
454 WT Col-0 Bgh inoculated 0.06 >More info 0.68 >More info WT Col-0 Un-inoculated Original data GEO bulk
455 cs26 short-day -0.24 >More info -0.50 >More info Leaves-WT-SD leaf Original data GEO bulk
456 PAHs stress 0.13 >More info 0.61 >More info exp control phenanthrene whole plants Original data GEO bulk
457 edr1 36 h powdery mildew 0.17 >More info 0.57 >More info Col-0 36 h powdery mildew Original data GEO bulk
458 siz1-3 drought 0.13 >More info 0.61 >More info Col-0 drought Original data GEO bulk
459 root cells epidermis 140mM NaCl 8 hours 0.53 >More info 0.20 >More info root cells epidermis standard 1 hour root cells epidermis Original data
460 Col whole leaf 3dpi 0.52 >More info 0.21 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
461 cat2-2; 8h switch to ambient CO2 concentrations; 0.16 >More info 0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
462 Tsu -Fe 48h Shoots 0.16 >More info 0.56 >More info Tsu +Fe 24h Shoots Original data GEO bulk
463 npr1 sni1 ssn2 SA 0.58 >More info 0.14 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
464 phyB mutant 16C 10hrs -0.58 >More info -0.14 >More info 16C 10h whole plant excluding roots Original data GEO bulk
465 WT Shoot-Pi -0.52 >More info -0.20 >More info WT Shoot+Pi shoots Original data GEO bulk
466 Nicotinamide-85hr 0.22 >More info 0.50 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
467 siliques AtHb1 control 0.20 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
468 hrpA fliC 7h 0.07 >More info 0.65 >More info Mock 7h hrpA fliC Original data GEO bulk
469 Dex-rga(delta17) 4h GA4+DEX -0.18 >More info -0.54 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
470 Rsch 8h 0.20 >More info 0.52 >More info Rsch CA Leaves Original data
471 WT 2-4h Xanthomonas 0.00 >More info 0.71 >More info WT T0 Original data GEO bulk
472 xyl-grown cell culture- 1h 1mM Suc -0.20 >More info -0.51 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
473 Col laser microdissected 5 dpi 0.20 >More info 0.50 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
474 irradiated leaf (WT 1d) 0.13 >More info 0.56 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
475 Dex-rga(delta17) 2h GA4+DEX -0.17 >More info -0.52 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
476 ice1 24H Cold 0.11 >More info 0.58 >More info WT 24H Cold Original data GEO bulk
477 35S:RPS4 eds1-2 2h -0.07 >More info -0.62 >More info 35S:RPS4 2h leaves Original data
478 IPT8 induced 12h 0.51 >More info 0.17 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
479 Heat Recovery 24 h (shoot) 0.16 >More info 0.52 >More info Stress mock 24 h (shoot) Original data Stress treatments
480 Col-Luc WT 3h antimycin A 0.09 >More info 0.59 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
481 phyB Rc50 0.52 >More info 0.15 >More info WT(Ler) Rc50 Original data GEO bulk
482 root cells epidermis 140mM NaCl 20 hours 0.51 >More info 0.16 >More info root cells epidermis standard 1 hour root cells epidermis Original data
483 bak1-3 +Pep2 2h 0.11 >More info 0.56 >More info WT +Pep2 2h Pep2 Original data GEO bulk
484 flu dark 8hours/30 minute light 0.09 >More info 0.58 >More info col dark 8hours/30 minute light Original data GEO bulk
485 A. halleri control-leaf 0.53 >More info 0.13 >More info A. petraea control-leaf Original data GEO bulk
486 Root GLU1-KO -0.16 >More info -0.50 >More info Root Col(0) roots Original data GEO bulk
487 safener treated 0.03 >More info 0.63 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
488 CCA1-ox 6am non-polysomal 0.15 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
489 smg5-2 0.09 >More info 0.57 >More info WT whole plant Original data GEO bulk
490 elevated CO2 normal Mg root -0.51 >More info -0.14 >More info atmospheric CO2 normal Mg root Root Original data
491 tmm1-inflorescence-tips -0.51 >More info -0.14 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
492 epiF3 -0.53 >More info -0.12 >More info WT Col-0 aerial part Original data
493 mpk6-ko Flg22 4h 0.01 >More info 0.64 >More info mpk6-ko H2O 4h Original data GEO bulk
494 bio4-1 mutant leaves -0.04 >More info 0.69 >More info WT leaves leaves Original data GEO bulk
495 GA 0.06 >More info 0.59 >More info none GA Rosette Original data GEO bulk
496 leaf blade in D 0.09 >More info 0.55 >More info leaf blade in WL leaf blades Original data GEO bulk
497 upf3 0.10 >More info 0.54 >More info WT whole plant Original data GEO bulk
498 efr-1 +elf18 10h 0.01 >More info -0.65 >More info WT +elf18 10h elf18 Original data GEO bulk
499 sfr3 cold 0.14 >More info 0.50 >More info WT cold All aerial tissue Original data GEO bulk
500 dde2-2 9 hpi A. brassicicola -0.01 >More info 0.65 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
501 hy5 low light -0.52 >More info -0.11 >More info Col-O low light Original data GEO bulk
502 rdr2-1 -0.55 >More info -0.08 >More info Col-0 Original data GEO bulk
503 Mutant hy5 -0.52 >More info -0.11 >More info Col-0 Original data GEO bulk
504 mutant acs2B (single mutant) -0.54 >More info -0.09 >More info col control (single mutant) Original data GEO bulk
505 35S::ERF104 Flg22 4h 0.08 >More info 0.55 >More info 35S::ERF104 H2O 4h Original data GEO bulk
506 penta Alternaria 3dpi 0.05 >More info 0.58 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
507 ahg1-1 0.56 >More info 0.06 >More info ABA control Original data GEO bulk
508 E.orontii Infection 3 day 0.01 >More info 0.61 >More info Uninfection 3 day Original data Elicitor treatments
509 sfr6 control -0.53 >More info -0.08 >More info WT control All aerial tissue Original data GEO bulk
510 Col-0 DCA 6d 0.50 >More info 0.10 >More info Col-0 MOCK 6d Original data GEO bulk
511 root - 04% oxygen - 30min 0.10 >More info 0.50 >More info root - 21% oxygen - 30min Original data GEO bulk
512 3x(p) 0.09 >More info 0.51 >More info 2x two week old seedlings Original data
513 npr1 sni1 brca2a SA -0.06 >More info -0.53 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
514 HopZ1a treated ulp1c ulp1d -0.05 >More info 0.64 >More info col Original data GEO bulk
515 rao2 AntimycinA 3h -0.54 >More info -0.04 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
516 AAF-OX 0.04 >More info 0.54 >More info Col-0 Rosette leaf Original data GEO bulk
517 eds16 whole leaf 5dpi -0.00 >More info -0.58 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
518 NahG 0.55 >More info 0.02 >More info Col-0 Leaves Original data GEO bulk
519 Laer Flg22 1h 0.05 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
520 Shoot submergence 7h 0.57 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
521 WT+chitooctaose -0.13 >More info 0.70 >More info WT+water chitooctaose seedlings Original data GEO bulk
522 Laer Flg22+GA 1h 0.04 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
523 IAA7mII over-expressor IAA Treated -0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
524 eds16 whole leaf 0h UI -0.01 >More info -0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
525 pnp1-1 1wk +P -0.00 >More info 0.55 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
526 dcl2-1 -0.52 >More info -0.02 >More info Col-0 Original data GEO bulk
527 Mutant nph4-1_arf19-1 (IAA) 0.50 >More info 0.04 >More info Col (IAA) Original data GEO bulk
528 WT flg22 1h 0.02 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
529 HopZ1a treated -0.10 >More info 0.64 >More info col Original data GEO bulk
530 Dark 2day ivd 0.54 >More info -0.01 >More info 0h ivd Original data
531 ORS1 induced -0.19 >More info 0.72 >More info mock-induced rosette leaves Original data GEO bulk
532 myb3 myb3r4d -0.08 >More info 0.61 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
533 gun1gun5 far-red pretreated 0.02 >More info -0.54 >More info WT far-red pretreated Original data GEO bulk
534 root cells epidermis 140mM NaCl 1 hour 0.51 >More info 0.00 >More info root cells epidermis standard 1 hour root cells epidermis Original data
535 Genotoxic Stress 3 h (shoot) -0.54 >More info 0.05 >More info Stress mock 3 h (shoot) Original data Stress treatments
536 ACC 3 h -0.03 >More info 0.52 >More info Mock 3 h Original data Basic hormone treatment of seedlings
537 35S:RPS4 eds1-2 8h 0.11 >More info -0.60 >More info 35S:RPS4 8h leaves Original data
538 miR393 flg22 1h -0.06 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
539 bio4-1 mutant watered00µM biotin leaves 0.31 >More info -0.79 >More info bio4-1 mutant leaves leaves Original data GEO bulk
540 IAA/inhibitor B Treated -0.11 >More info 0.59 >More info IAA Treated Original data GEO bulk
541 Light -0.03 >More info 0.51 >More info Control Original data GEO bulk
542 dcl3-1 -0.52 >More info 0.05 >More info Col-0 Original data GEO bulk
543 HARAP hypoxic -0.03 >More info 0.50 >More info hypoxic hypoxia Original data GEO bulk
544 Total RNA 35S:HF-RPL18 -0.10 >More info 0.57 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
545 G3P 0.13 >More info -0.59 >More info Mock distal leaves Original data GEO bulk
546 Leaf wounded -0.06 >More info 0.51 >More info Leaf control vegetative leaf Original data GEO bulk
547 total mRNA eif3k -0.11 >More info 0.55 >More info total mRNA WT aerial part Original data GEO bulk
548 cs26 long day -0.06 >More info 0.50 >More info Leaves-WT-LD leaf Original data GEO bulk
549 seedling -S Exp 0.16 >More info -0.60 >More info seedling FN Exp seedling Original data
550 Pto inoculated -0.13 >More info 0.56 >More info col Original data GEO bulk
551 phyB mutant 22C 4hrs 0.07 >More info -0.50 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
552 4d red light grown hmr-22 seedlings 0.63 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
553 eds16 whole leaf 3dpi 0.19 >More info -0.60 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
554 seedlings by volatiles from leafminer damaged
Lima bean 24h		 0.50 >More info -0.10 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
555 Col ozone 3h -0.20 >More info 0.60 >More info Col clean-air 3h ozone Original data GEO bulk
556 Light 3day hml -0.13 >More info 0.52 >More info 0h hml Original data
557 erf104-ko Flg22 4h -0.24 >More info 0.61 >More info erf104-ko H2O 4h Original data GEO bulk
558 WT zebularine 5d -0.50 >More info 0.14 >More info WT mock 5d shoot apical meristem Original data
559 sav1-1 light -0.15 >More info 0.51 >More info Col-0 light seedlings Original data GEO bulk
560 Col-0 5dpi -0.50 >More info 0.15 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
561 tunicamycin 0.26 >More info -0.60 >More info DMF Original data GEO bulk
562 t-zeatin 0.5 h 0.23 >More info -0.54 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
563 root cap pGL2(root cap pGL2BRI1) 8h BL -0.22 >More info 0.51 >More info root cap pGL2(root cap pGL2BRI1) 0h BL brassinosteroid root Original data
564 ahg3-1 0.53 >More info -0.25 >More info ABA control Original data GEO bulk
565 dor control -0.56 >More info 0.28 >More info WT control Original data GEO bulk
566 spx1 spx2 resupplied Pi 4h -0.51 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
567 seedling h S Exp -0.24 >More info 0.51 >More info seedling -S Exp seedling Original data
568 eds16 whole leaf 1dpi 0.37 >More info -0.57 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
569 root - 08% oxygen - 30min -0.51 >More info 0.42 >More info root - 21% oxygen - 30min Original data GEO bulk
570 FarRed Light 45min 0.42 >More info -0.50 >More info White Light 45min Original data Light treatments
571 inhibitor A Treated -0.51 >More info 0.50 >More info Negative Control Original data GEO bulk