4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on seedlings-week-old RECA1-overexpressing transgenic
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List of experiments correlated with "seedlings-week-old RECA1-overexpressing transgenic"  Help Download transcriptome of top 30
Score Experiment Correlation from
seedlings-week-old RECA1-overexpressing transgenic		 Correlation to
seedlings-week-old RECA1-overexpressing transgenic		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 seedlings-week-old RECA1-overexpressing
transgenic		 1.00 >More info 1.00 >More info seedlings-week-old Col-0 seedlings Original data
2 CMV-WT 0.80 >More info 0.79 >More info Mock-At Aerial tissues Original data GEO bulk
3 CLO 4mM 0.80 >More info 0.78 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
4 Col whole leaf 7dpi 0.77 >More info 0.81 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
5 AgNO3 3 h 0.80 >More info 0.78 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
6 Col ozone 3h 0.74 >More info 0.84 >More info Col clean-air 3h ozone Original data GEO bulk
7 Col whole leaf 5dpi 0.77 >More info 0.81 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
8 SA 4mM 0.78 >More info 0.80 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
9 cpr5scv1 0.76 >More info 0.81 >More info WT(COL) Original data GEO bulk
10 efr-1 +elf18 10h -0.80 >More info -0.77 >More info WT +elf18 10h elf18 Original data GEO bulk
11 R. solani AG8 0.81 >More info 0.76 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
12 bak1-3 +Pep2 10h 0.82 >More info 0.75 >More info WT +Pep2 10h Pep2 Original data GEO bulk
13 pepr1-1 Pepr2-3 +Pep2 2h -0.82 >More info -0.74 >More info WT +Pep2 2h Pep2 Original data GEO bulk
14 Cor hrpS 10h 0.78 >More info 0.78 >More info Mock 10h Cor hrpS Original data GEO bulk
15 ataf1-1 mutant Col-0 Bgh inoculated 0.77 >More info 0.79 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
16 GST NPP1 4 h (leaf) 0.77 >More info 0.78 >More info Mock 4 h (leaf) Original data Elicitor treatments
17 S58-2 0.74 >More info 0.81 >More info wt Original data GEO bulk
18 pepr1-1 Pepr2-3 +Pep2 10h -0.80 >More info -0.74 >More info WT +Pep2 10h Pep2 Original data GEO bulk
19 root Dosed gold 0.79 >More info 0.75 >More info root No gold .125 mM gold 24 h roots Original data
20 Col-0 9 hpi A. brassicicola 0.77 >More info 0.77 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
21 camta1/2/3 warm 0.80 >More info 0.74 >More info WT warm entire aerial part Original data GEO bulk
22 S15-118 0.72 >More info 0.82 >More info wt Original data GEO bulk
23 0.125 mM gold 24 h 0.79 >More info 0.75 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
24 camta2/3 warm 0.77 >More info 0.76 >More info WT warm entire aerial part Original data GEO bulk
25 camta1/3 warm 0.75 >More info 0.78 >More info WT warm entire aerial part Original data GEO bulk
26 CMP 4hr 0.80 >More info 0.73 >More info Acetone 4hr root Original data GEO bulk
27 bio4-1 mutant leaves 0.73 >More info 0.80 >More info WT leaves leaves Original data GEO bulk
28 eds16 whole leaf 5dpi -0.72 >More info -0.80 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
29 cpr5npr1 0.73 >More info 0.79 >More info WT(COL) Original data GEO bulk
30 UV Stress 24 h (shoot) 0.73 >More info 0.79 >More info Stress mock 24 h (shoot) Original data Stress treatments
31 edr1 36 h powdery mildew 0.79 >More info 0.73 >More info Col-0 36 h powdery mildew Original data GEO bulk
32 35S:RPS4 eds1-2 8h -0.78 >More info -0.74 >More info 35S:RPS4 8h leaves Original data
33 SLWF infested 0.78 >More info 0.74 >More info SLWF uninfested rosette tissue Original data GEO bulk
34 oligomycin 4 h 0.80 >More info 0.71 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
35 cpr5 0.76 >More info 0.75 >More info WT seedling Original data GEO bulk
36 col-5 hrpA 12h 0.75 >More info 0.76 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
37 P.p 6hai 0.77 >More info 0.73 >More info At-Control roots Original data GEO bulk
38 coi1-2 0.72 >More info 0.78 >More info Col-0 mock Whole seedling Original data GEO bulk
39 Col-0 INA 48h 0.70 >More info 0.80 >More info Col-0 MOCK 48h Original data GEO bulk
40 Mutant siz1-3 (Drought) 0.77 >More info 0.73 >More info Col-0 (Drought) Original data GEO bulk
41 35S:RPS4 eds1-2 24h -0.78 >More info -0.72 >More info 35S:RPS4 24h leaves Original data
42 WT-SA 0.74 >More info 0.76 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
43 WT powdery mildew 0.74 >More info 0.76 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
44 siz1-3 drought 0.77 >More info 0.73 >More info Col-0 drought Original data GEO bulk
45 pvip1 pvip2 0.74 >More info 0.76 >More info Col-0 whole rosettes Original data GEO bulk
46 mkk1/mkk2 control rep 0.76 >More info 0.74 >More info Col-0 Time 0 rep Original data GEO bulk
47 IMI 4mM 0.80 >More info 0.70 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
48 aba3-1 0.68 >More info 0.81 >More info wt Original data GEO bulk
49 Primisulfuron EC50 0.75 >More info 0.74 >More info Carrier (primisulfuron) Original data GEO bulk
50 dde2-2 9 hpi A. brassicicola 0.75 >More info 0.74 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
51 pmr5 pmr6 0.72 >More info 0.77 >More info Col-0 Original data GEO bulk
52 smg7b-1 0.73 >More info 0.76 >More info WT whole plant Original data GEO bulk
53 anac017-2 AntimycinA 3h -0.76 >More info -0.73 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
54 WT-NOCO2 INFECTED 0.77 >More info 0.72 >More info WT-MOCK Original data GEO bulk
55 DFPM 0.80 >More info 0.69 >More info control Original data GEO bulk
56 Triazolopyrimidine EC50 0.75 >More info 0.74 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
57 TNT-seedlings 0.74 >More info 0.75 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
58 edr1 18 h powdery mildew 0.74 >More info 0.75 >More info Col-0 18 h powdery mildew Original data GEO bulk
59 Sulfometuron EC50 0.77 >More info 0.72 >More info Carrier Original data GEO bulk
60 AvrRpm1 2 h (leaf) 0.75 >More info 0.73 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
61 E.coli TUV86 2 fliC 7h 0.75 >More info 0.73 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
62 seedlings protease IV 0.75 >More info 0.73 >More info seedlings nontreated control whole seedling Original data
63 cpr5 0.72 >More info 0.76 >More info WT(COL) Original data GEO bulk
64 WT Col-0 Bgh inoculated 0.73 >More info 0.75 >More info WT Col-0 Un-inoculated Original data GEO bulk
65 del1-1 mutant 5d uninfected 0.72 >More info 0.75 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
66 P.p 10.5hai 0.75 >More info 0.72 >More info At-Control roots Original data GEO bulk
67 E.coli 0157 H7 7h 0.73 >More info 0.74 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
68 mbd6 mutant thaliana 10-day-old seedling 0.74 >More info 0.73 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
69 cpr5npr1svi1 0.69 >More info 0.78 >More info WT(COL) Original data GEO bulk
70 Phaseolicola 2 h (leaf) 0.73 >More info 0.73 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
71 Shoot -Cs 0.66 >More info 0.80 >More info Control-shoot Original data GEO bulk
72 pad4-PsmES4326-24hpi -0.76 >More info -0.70 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
73 ein2-1 9 hpi A. brassicicola 0.76 >More info 0.70 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
74 SA 0.71 >More info 0.75 >More info WT mock Whole seedling Original data GEO bulk
75 P.p 2.5hai 0.74 >More info 0.72 >More info At-Control roots Original data GEO bulk
76 Col-0 V. longisporum-inoculated 48 hpi 0.69 >More info 0.77 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
77 WT in -N 0.75 >More info 0.71 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
78 sid2-1 cold -0.76 >More info -0.70 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
79 Laer Flg22 2h 0.77 >More info 0.69 >More info Laer Control leaf discs Original data GEO bulk
80 GST 4 h (leaf) 0.66 >More info 0.80 >More info Mock 4 h (leaf) Original data Elicitor treatments
81 Elevated CO2 AMPLE N NIGHT 0.66 >More info 0.79 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
82 SCR-GR Time 1H Dex 0.65 >More info 0.80 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
83 +1.6 mM Tween 20 1 h. 0.67 >More info 0.78 >More info +distilled water 1 h. Original data GEO bulk
84 camta3-2 0.69 >More info 0.76 >More info WT Original data GEO bulk
85 Mutant siz1-3 0.72 >More info 0.73 >More info Col-0 Original data GEO bulk
86 siz1-3 control 0.72 >More info 0.73 >More info Col-0 control Original data GEO bulk
87 P.p 30hai 0.74 >More info 0.71 >More info At-Control roots Original data GEO bulk
88 mkk1/mkk2 24h BTH rep 0.76 >More info 0.69 >More info Col-0 24h BTH rep Original data GEO bulk
89 WT AntimycinA 3h 0.73 >More info 0.72 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
90 pho1 0.68 >More info 0.76 >More info Col2WT Original data GEO bulk
91 sni1 0.66 >More info 0.78 >More info WT Original data GEO bulk
92 ceh1 mutant 0.72 >More info 0.72 >More info Parent line Original data
93 BLM+INA 0.69 >More info 0.75 >More info CK BLM and INA seedling Original data
94 LTN008-2 aza-dc 0.79 >More info 0.65 >More info LTN012-2 Mock Original data
95 Cocultivation 8 hrs root 0.75 >More info 0.69 >More info Mock cocultivation 8 hrs root Root Original data
96 Col-Luc WT 3h antimycin A 0.75 >More info 0.69 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
97 low CO2 + light 0.68 >More info 0.75 >More info normal CO2 + light Original data GEO bulk
98 Fenclorim 4hr 0.79 >More info 0.64 >More info Acetone 4hr root Original data GEO bulk
99 hrpA 7h 0.75 >More info 0.68 >More info Mock 7h hrpA Original data GEO bulk
100 CMP 24hr 0.78 >More info 0.65 >More info Acetone 24hr root Original data GEO bulk
101 35S::ERF104 Flg22 4h 0.71 >More info 0.72 >More info 35S::ERF104 H2O 4h Original data GEO bulk
102 HopZ1a treated 0.72 >More info 0.71 >More info col Original data GEO bulk
103 WT 2-4h Xanthomonas 0.72 >More info 0.70 >More info WT T0 Original data GEO bulk
104 msh1 albino 0.72 >More info 0.70 >More info WT aerial part Original data GEO bulk
105 hrpA fliC 7h 0.74 >More info 0.68 >More info Mock 7h hrpA fliC Original data GEO bulk
106 Col-0 C2H4 24h 0.73 >More info 0.69 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
107 OE WRKY63.3 high light 0.67 >More info 0.74 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
108 Whole root - low pH 12H 0.71 >More info 0.70 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
109 Col-0 under 4 days salt 0.78 >More info 0.62 >More info Col-0 under control 4 days salt treatment rosette Original data
110 WT +elf18 10h 0.75 >More info 0.65 >More info WT untreated elf18 Original data GEO bulk
111 camta1/2/3 24h cold 0.73 >More info 0.67 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
112 Col-0 INA 6d 0.70 >More info 0.70 >More info Col-0 MOCK 6d Original data GEO bulk
113 hrcC 0.71 >More info 0.69 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
114 Flagellin 4 h (leaf) 0.68 >More info 0.72 >More info Mock 4 h (leaf) Original data Elicitor treatments
115 OH1 0.67 >More info 0.73 >More info Col-0 leaves Original data GEO bulk
116 15m.KCl 0.67 >More info 0.73 >More info To. KCl 14 day old Roots Original data GEO bulk
117 Laer Flg22 1h 0.77 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
118 Laer Flg22+GA 2h 0.77 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
119 col-5 DC3000 12h 0.71 >More info 0.68 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
120 ARR22-ox (t-zeatin 3 h) 0.72 >More info 0.67 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
121 Nicotinamide-53hr 0.70 >More info 0.69 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
122 Cycloheximide 3 h 0.70 >More info 0.69 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
123 gh3.5-1D 48 hpi 0.74 >More info 0.64 >More info Col-0 uninoculated Original data GEO bulk
124 A. thaliana-A. lyrata hybrid -0.64 >More info -0.74 >More info A. thaliana mature leaves before flowering Original data GEO bulk
125 WT 3h -P 0.62 >More info 0.76 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
126 CAX1/CAX3 mutant 0.71 >More info 0.67 >More info Col whole plant Original data GEO bulk
127 Col0-PsmES4326-24hpi 0.77 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
128 8h-DC3000 avrRpm1 0.69 >More info 0.69 >More info 8h-DC3000 leaves Original data GEO bulk
129 WT +elf18 2h 0.71 >More info 0.66 >More info WT untreated elf18 Original data GEO bulk
130 wrky33 Bc inoculation 14h 0.81 >More info 0.56 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
131 AFB1 flg22 2h 0.72 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
132 RPL18 TuMV inoculated total RNA 0.69 >More info 0.68 >More info mock inoculated total RNA PO Original data GEO bulk
133 vtc1 (II) 0.70 >More info 0.67 >More info Col (II) rosette Original data GEO bulk
134 Col ozone 2d 0.63 >More info 0.74 >More info Col clean-air 2d ozone Original data GEO bulk
135 Te ozone 0.79 >More info 0.58 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
136 P.syringae AvrRpt2 4 h (leaf) 0.64 >More info 0.73 >More info Mock 4 h (leaf) Original data Elicitor treatments
137 WT 30μM arsenate 8 hours. 0.74 >More info 0.63 >More info WT control (not supplemented). Original data
138 GO5; 8h switch to ambient CO2 concentrations; 0.63 >More info 0.74 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
139 Cor 10h 0.74 >More info 0.63 >More info Mock 10h Cor Original data GEO bulk
140 Lipopolysaccaride4 h (leaf) 0.69 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
141 miR393 flg22 2h 0.68 >More info 0.68 >More info WT 0h Leaf tissue Original data GEO bulk
142 B.cinerea 18 h infection 0.68 >More info 0.68 >More info Mock 18 h Original data Botrytis cinerea infection
143 Botrytis cinerea 18h 0.68 >More info 0.68 >More info control 18h Original data GEO bulk
144 CT101 ozone 0.78 >More info 0.58 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
145 sid2 -0.64 >More info -0.72 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
146 WT Bc inoculation 14h 0.78 >More info 0.58 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
147 Elevated CO2 AMPLE N DAY 0.59 >More info 0.77 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
148 Octopus overexpressor 35SDYG25 0.67 >More info 0.69 >More info WS Original data GEO bulk
149 WT+chitooctaose 0.62 >More info 0.74 >More info WT+water chitooctaose seedlings Original data GEO bulk
150 Osmotic Stress 24 h (shoot) 0.71 >More info 0.64 >More info Stress mock 24 h (shoot) Original data Stress treatments
151 8hr-pH4.5 0.69 >More info 0.66 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
152 AvrRpt2 Col-0 6hpi 0.76 >More info 0.59 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
153 Seedling KUA1-IOX est 0.71 >More info 0.64 >More info Seedling KUA1-IOX mock Original data
154 INA 0.52 >More info 0.83 >More info CK INA seedling Original data
155 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.78 >More info 0.57 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
156 npr1-1 SA -0.72 >More info -0.62 >More info Col-0 SA complete seedling Original data
157 vtc2 (I) 0.69 >More info 0.65 >More info Col (I) rosette Original data GEO bulk
158 vte2-1 3d vernalization 0.71 >More info 0.63 >More info WT 3d vernalization Original data GEO bulk
159 ani1 T16 -0.69 >More info -0.65 >More info WT T16 root tissue Original data GEO bulk
160 Laer Flg22+GA 1h 0.75 >More info 0.59 >More info Laer Control leaf discs Original data GEO bulk
161 cs26 long day 0.73 >More info 0.61 >More info Leaves-WT-LD leaf Original data GEO bulk
162 CeO2 germinant -0.59 >More info -0.75 >More info Millipore Water germinant CeO2 seedling Original data
163 coi1-16 ein2 sid2 ctrl -0.77 >More info -0.57 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
164 WT flg22 2h 0.72 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
165 Col BTH 0.66 >More info 0.67 >More info Col rosettes Original data GEO bulk
166 toc1-1-77hr 0.72 >More info 0.61 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
167 R. solani AG2-1 0.69 >More info 0.64 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
168 Laer treat paclobutrazol (PAC) 0.72 >More info 0.61 >More info Laer Control leaf discs Original data GEO bulk
169 upf3 0.71 >More info 0.62 >More info WT whole plant Original data GEO bulk
170 Col-0-avrB-6h 0.68 >More info 0.65 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
171 flu over-tAPX 0.66 >More info 0.67 >More info WT Col Original data GEO bulk
172 wavy 0.65 >More info 0.67 >More info WT Original data GEO bulk
173 bio4-1 mutant watered00µM biotin leaves -0.67 >More info -0.65 >More info bio4-1 mutant leaves leaves Original data GEO bulk
174 plant (tga2-5-6) 4h phytoprostane A1 0.67 >More info 0.65 >More info plant (tga2-5-6) 4h control Original data GEO bulk
175 coi1-16 ein2 sid2 ozone 0.80 >More info 0.52 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
176 sfr6 drought -0.58 >More info -0.74 >More info WT drought All aerial tissue Original data GEO bulk
177 oas-a1.1 Cd 18h 0.62 >More info 0.70 >More info Cd 18h root Root Original data GEO bulk
178 rosette leaves fdh 0.61 >More info 0.71 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
179 hira-root -0.58 >More info -0.74 >More info WT-root root Original data
180 Botrytis cinerea 48h 0.71 >More info 0.61 >More info control 48h Original data GEO bulk
181 pmr5 0.60 >More info 0.72 >More info Col-0 Original data GEO bulk
182 nia1nia2 0.69 >More info 0.63 >More info Col-0 whole seedlings Original data GEO bulk
183 Col whole leaf amplified 5 dpi 0.62 >More info 0.70 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
184 myb3 myb3r4d 0.58 >More info 0.74 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
185 abi4 vtc2 (I) 0.72 >More info 0.60 >More info Col (I) rosette Original data GEO bulk
186 camta3-1 0.59 >More info 0.72 >More info WT Original data GEO bulk
187 Elevated CO2 fully expanded leaf 0.66 >More info 0.65 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
188 Nicotinamide-81hr 0.66 >More info 0.65 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
189 anac017-1 H2O2 3h -0.71 >More info -0.60 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
190 downy mildew cotyledons late stage 0.62 >More info 0.69 >More info mock inoculated Cotyledons Original data GEO bulk
191 HopZ1a treated ulp1c ulp1d 0.67 >More info 0.64 >More info col Original data GEO bulk
192 Light 3day wt -0.71 >More info -0.60 >More info 0h wt Original data
193 1 h Light Total RNA -0.57 >More info -0.74 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
194 Elevated CO2 expanding leaf 0.65 >More info 0.66 >More info Ambient CO2 expanding leaf expanding leaf Original data
195 safener treated 0.69 >More info 0.62 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
196 petiole in D 0.64 >More info 0.67 >More info petiole in WL petioles Original data GEO bulk
197 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.76 >More info 0.54 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
198 chito-octamer 0.64 >More info 0.66 >More info Col Mock Original data GEO bulk
199 Col-0 48 hpi 0.65 >More info 0.65 >More info Col-0 uninoculated Original data GEO bulk
200 bZIP1ko mutant N+Light- 0.68 >More info 0.62 >More info WT-sib N+Light- whole plant Original data GEO bulk
201 WT 1wk -P 0.61 >More info 0.69 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
202 mkk2 24h BTH rep 0.65 >More info 0.64 >More info Col-0 24h BTH rep Original data GEO bulk
203 Laer pretreat GA Flg22 1h 0.58 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
204 smg5-2 0.69 >More info 0.60 >More info WT whole plant Original data GEO bulk
205 Shoot submergence 24h 0.61 >More info 0.68 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
206 WT flg22 1h 0.68 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
207 WT chitooctaose 0.69 >More info 0.60 >More info WT water Original data GEO bulk
208 low CO2 + dark 0.62 >More info 0.67 >More info normal CO2 + light Original data GEO bulk
209 Chitosan 3h Treatment 0.72 >More info 0.57 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
210 Nicotinamide-57hr 0.68 >More info 0.61 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
211 arf2 mock 0.66 >More info 0.62 >More info Col mock Original data GEO bulk
212 ice1 6H Cold 0.65 >More info 0.63 >More info WT 6H Cold Original data GEO bulk
213 overexpresser LBD38 in -N -0.68 >More info -0.60 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
214 miR393 flg22 1h 0.65 >More info 0.63 >More info WT 0h Leaf tissue Original data GEO bulk
215 mil4 BTH 0.66 >More info 0.62 >More info Col BTH rosettes Original data GEO bulk
216 cs26 short-day -0.63 >More info -0.65 >More info Leaves-WT-SD leaf Original data GEO bulk
217 Mutant arf2 (etiol) 0.66 >More info 0.62 >More info Col (etiol) Original data GEO bulk
218 tor mutant glucose 0.67 >More info 0.61 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
219 npr1 sni1 brca2a SA -0.61 >More info -0.67 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
220 leaf blade in D 0.57 >More info 0.71 >More info leaf blade in WL leaf blades Original data GEO bulk
221 flu 0.66 >More info 0.61 >More info WT Col Original data GEO bulk
222 Root -Cs 0.60 >More info 0.67 >More info Control-root Original data GEO bulk
223 Fenclorim 24hr 0.69 >More info 0.58 >More info Acetone 24hr root Original data GEO bulk
224 WT NAA/flg 2h 0.71 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
225 gpa1 -ABA GC -0.57 >More info -0.70 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
226 WT cold 0.70 >More info 0.57 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
227 Myzus persicae saliva 0.54 >More info 0.73 >More info Control Original data GEO bulk
228 WT NAA/flg 1h 0.70 >More info 0.57 >More info WT 0h Leaf tissue Original data GEO bulk
229 C24 ozone 0.78 >More info 0.49 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
230 Col-0 ozone 0.76 >More info 0.51 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
231 aphid saliva treated 0.54 >More info 0.73 >More info control aphid saliva treated leaves Original data GEO bulk
232 9m.KCl 0.61 >More info 0.66 >More info To. KCl 14 day old Roots Original data GEO bulk
233 5-Triiodobenzoic acid3 h 0.62 >More info 0.65 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
234 pmr4-1 powdery mildew 0.63 >More info 0.64 >More info WT powdery mildew uninoculated Original data GEO bulk
235 PAHs stress 0.66 >More info 0.61 >More info exp control phenanthrene whole plants Original data GEO bulk
236 ice1 control 0.68 >More info 0.58 >More info WT control Original data GEO bulk
237 RPL18 TuMV inoculated polysomal RNA 0.65 >More info 0.61 >More info mock inoculated polysomal RNA PO Original data GEO bulk
238 S14-150 0.62 >More info 0.64 >More info wt Original data GEO bulk
239 WT+H2O2 0.60 >More info 0.66 >More info WT H2O2 Original data GEO bulk
240 Col upon hypoxia 6 hrs 0.68 >More info 0.58 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
241 Roots Cd -0.55 >More info -0.71 >More info Roots control Cd Root Original data GEO bulk
242 aox1a:rpoTmp untreated 0.61 >More info 0.65 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
243 Mutant NahG(leaf) -0.56 >More info -0.70 >More info Col-0 (leaf) Original data GEO bulk
244 AFB1 flg22 1h 0.65 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
245 Dex-rga(delta17) 4h GA4+DEX -0.71 >More info -0.54 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
246 dor drought 0.60 >More info 0.65 >More info WT drought Original data GEO bulk
247 Cor 24h 0.63 >More info 0.62 >More info Mock 24h Cor Original data GEO bulk
248 erf104-ko Flg22 4h 0.53 >More info 0.72 >More info erf104-ko H2O 4h Original data GEO bulk
249 gai Control 0.74 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
250 npr1-3 DCA 48h 0.64 >More info 0.61 >More info npr1-3 MOCK 48h Original data GEO bulk
251 D2O 0.67 >More info 0.58 >More info H2O seedling Original data GEO bulk
252 mpk6-ko Flg22 4h 0.61 >More info 0.64 >More info mpk6-ko H2O 4h Original data GEO bulk
253 Seedling-HeatStressed TOTALmRNA 0.66 >More info 0.59 >More info Seedling-control TOTALmRNA seedling Original data
254 Salt Stress 24 h (root) 0.72 >More info 0.53 >More info Stress mock 24 h (root) Original data Stress treatments
255 chito-tetramer 0.58 >More info 0.66 >More info Col Mock Original data GEO bulk
256 col-5 DC3000-avrRpm 4h 0.65 >More info 0.59 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
257 oligomycin 1 h 0.58 >More info 0.66 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
258 6h +Pi -0.58 >More info -0.66 >More info 6h -Pi root Original data GEO bulk
259 eds16 whole leaf 0h UI -0.42 >More info -0.82 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
260 Phytoprostane A1 4 h 0.62 >More info 0.61 >More info Col-0 Original data GEO bulk
261 toc1-1-65hr 0.69 >More info 0.54 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
262 Col-0 low oxygen 0.58 >More info 0.65 >More info Col-0 control low oxygen root Original data GEO bulk
263 pnp1-1 3h +P 0.69 >More info 0.54 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
264 DC3000 2 h (leaf) 0.69 >More info 0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
265 35S::PI ap3-3 35S::AP-GR +DEX 0.59 >More info 0.64 >More info 0hr DEX Original data GEO bulk
266 9 hr Hypoxia 1 hr recovery Total RNA 0.60 >More info 0.63 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
267 petiole in FRD 0.62 >More info 0.61 >More info petiole in WL petioles Original data GEO bulk
268 npr1-PsmES4326-24hpi -0.62 >More info -0.61 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
269 miR393 0h -0.58 >More info -0.65 >More info WT 0h Leaf tissue Original data GEO bulk
270 (Col-0)+200 uM As 0.68 >More info 0.55 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
271 DC3000 hrcC 2 h (leaf) 0.60 >More info 0.63 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
272 Shoot -K 0.67 >More info 0.56 >More info Control-shoot Original data GEO bulk
273 K starvation (shoot) 0.67 >More info 0.56 >More info Ws (shoot) Original data GEO bulk
274 Leafminer damaged seedlings 0.66 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
275 (Col-0)+100 uM As 0.67 >More info 0.55 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
276 Col whole leaf 5 dpi 0.56 >More info 0.66 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
277 GA 0.55 >More info 0.67 >More info none GA Rosette Original data GEO bulk
278 1 h Light IP RNA -0.52 >More info -0.70 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
279 35S:RPS4 eds1-2 2h -0.53 >More info -0.69 >More info 35S:RPS4 2h leaves Original data
280 phr1 Root-Pi 0.60 >More info 0.62 >More info WT Root+Pi roots Original data GEO bulk
281 OE WRKY40.4 -0.60 >More info -0.62 >More info OE WRKY40.4 none leaf Original data GEO bulk
282 Col laser microdissected 5 dpi 0.53 >More info 0.69 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
283 til1-1 22C 0.64 >More info 0.58 >More info Col-0 22C Original data GEO bulk
284 ABA DFPM 0.70 >More info 0.52 >More info control Original data GEO bulk
285 leaf blade in FRD 0.57 >More info 0.65 >More info leaf blade in WL leaf blades Original data GEO bulk
286 rcf1-1 cold 24h 0.63 >More info 0.58 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
287 rpoTmp(line) MLD stressed 0.64 >More info 0.57 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
288 tt4 0.57 >More info 0.64 >More info Col-0 aerial part Original data
289 gh3.5D uninoculated -0.56 >More info -0.65 >More info Col-0 48 hpi Original data GEO bulk
290 toc1-1-53hr 0.66 >More info 0.55 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
291 cdpk6-yfp 0.68 >More info 0.52 >More info Kan seedlings Original data GEO bulk
292 atmospheric CO2 low Mg shoot 0.68 >More info 0.52 >More info atmospheric CO2 normal Mg shoot Shoot Original data
293 AtMYB30-ox 2-4h Xanthomonas 0.62 >More info 0.58 >More info WT 2-4h Xanthomonas Original data GEO bulk
294 shoots bhlh100/101 0uM Fe 0.71 >More info 0.49 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
295 Mutant gh3.5-1D (AvrRpt2) 0.63 >More info 0.57 >More info Col-0 (AvrRpt2) Original data GEO bulk
296 Seedling-HeatStressed POLYSOMESmRNA 0.63 >More info 0.57 >More info Seedling-control POLYSOMESmRNA seedling Original data
297 sid2-2 9 hpi A. brassicicola 0.74 >More info 0.46 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
298 upf1 0.66 >More info 0.53 >More info WT whole plant Original data GEO bulk
299 Shoot dark control 7h 0.57 >More info 0.62 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
300 UV 0.75 >More info 0.44 >More info WT aerial region Original data GEO bulk
301 gun1gun5 far-red pretreated -0.62 >More info -0.57 >More info WT far-red pretreated Original data GEO bulk
302 Nicotinamide-73hr 0.62 >More info 0.57 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
303 Col-0 DCA 48h 0.41 >More info 0.78 >More info Col-0 MOCK 48h Original data GEO bulk
304 irradiated leaf (cmt 1d) 0.68 >More info 0.50 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
305 Shoot dark control 24h 0.53 >More info 0.65 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
306 MPK6 ox Shoot Hypoxia 0.62 >More info 0.56 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
307 aerial organ callus inducing medium 12 h 0.59 >More info 0.59 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
308 Nicotinamide-49hr 0.61 >More info 0.57 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
309 Nicotinamide-69hr 0.57 >More info 0.61 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
310 csn5 (csn5a-2 csn5b) light 0.69 >More info 0.49 >More info WT light Original data GEO bulk
311 eds16 whole leaf 3dpi -0.49 >More info -0.69 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
312 amiRAP aerobic -0.48 >More info -0.70 >More info WT aerobic aerobic Original data GEO bulk
313 ice1 3H Cold 0.63 >More info 0.54 >More info WT 3H Cold Original data GEO bulk
314 stn7-1 -0.52 >More info -0.65 >More info Col-0 rosette leaves Original data GEO bulk
315 toc1-1-49hr 0.63 >More info 0.54 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
316 20d after anthesis 0.58 >More info 0.59 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
317 Dark 3day ivd 0.67 >More info 0.50 >More info 0h ivd Original data
318 aerial organ callus inducing medium 48 h 0.60 >More info 0.57 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
319 9 hr Hypoxia 1 hr recovery IP RNA 0.63 >More info 0.54 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
320 eds16 whole leaf 6hpi -0.45 >More info -0.72 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
321 Dex-rga(delta17) 4h GA4 -0.51 >More info -0.65 >More info Vector 4h GA4 shoots Original data GEO bulk
322 Imidazolinone EC50 0.60 >More info 0.56 >More info Carrier (Imidazolinone) Original data GEO bulk
323 mbd4 mutant thaliana 10-day-old seedling 0.64 >More info 0.52 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
324 cat2-2; 8h switch to ambient CO2 concentrations; 0.67 >More info 0.49 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
325 vtc2-1 -0.68 >More info -0.48 >More info Col-0 whole plant Original data GEO bulk
326 A6 mutant 0.59 >More info 0.57 >More info WT rosette leaves Rosette leaves Original data GEO bulk
327 irradiated leaf (WT 1d) 0.75 >More info 0.41 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
328 ice1 24H Cold 0.59 >More info 0.57 >More info WT 24H Cold Original data GEO bulk
329 Dex-rga(delta17) 2h GA4+DEX -0.70 >More info -0.46 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
330 24h +Pi -0.58 >More info -0.58 >More info 24h -Pi root Original data GEO bulk
331 seedling -S Exp 0.43 >More info 0.73 >More info seedling FN Exp seedling Original data
332 9 hr Hypoxia IP RNA 0.61 >More info 0.54 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
333 atgsnor1-1 -0.64 >More info -0.51 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
334 detached inflorescences 24h 0.50 >More info 0.65 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
335 Stem tissue 5 days NAA 0.56 >More info 0.59 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
336 CMV-A2b mutant 0.70 >More info 0.45 >More info Mock-At Aerial tissues Original data GEO bulk
337 lht1 PstDC3000 48h 0.56 >More info 0.59 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
338 penta Alternaria 3dpi 0.69 >More info 0.46 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
339 C24-3h IAA 0.66 >More info 0.49 >More info C24-0h IAA whole plant Original data GEO bulk
340 Col-0 Flg22 4h 0.52 >More info 0.62 >More info Col-0 H2O 4h Original data GEO bulk
341 cat2-hCO2 -0.66 >More info -0.48 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
342 hsfa2 KO -0.52 >More info -0.62 >More info WT (Col-0) whole seedling Original data GEO bulk
343 dor control 0.59 >More info 0.55 >More info WT control Original data GEO bulk
344 1h +Pi -0.51 >More info -0.63 >More info 1h -Pi root Original data GEO bulk
345 dense canopy 0.52 >More info 0.62 >More info single (control) petiole Original data GEO bulk
346 P35S:rGRF3 0.65 >More info 0.49 >More info WS Original data GEO bulk
347 dicamba 0.59 >More info 0.55 >More info WT mock whole seedling Original data GEO bulk
348 TA induced 0.48 >More info 0.66 >More info Methanol TA Suspension cells Original data GEO bulk
349 6h volatiles Sp. HRO-C48 0.45 >More info 0.69 >More info 6h untreated whole seedling Original data GEO bulk
350 del1-1 5dpi 0.69 >More info 0.44 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
351 Col-0 mbs1-1 HL 3h -0.57 >More info -0.56 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
352 IRP1-OE-Fe--shoot 0.58 >More info 0.55 >More info COL-0-Fe--shoot shoot Original data
353 bHLH122 ox -0.53 >More info -0.60 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
354 sps1 -0.65 >More info -0.48 >More info WT seedling Original data GEO bulk
355 Nicotinamide-65hr 0.62 >More info 0.51 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
356 4d red light grown hmr-5 seedlings 0.59 >More info 0.54 >More info 4d red light grown WT(Col-0) seedlings Original data
357 M6PR transgenic 0mM NaCl 0.55 >More info 0.57 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
358 seedlings +5AC 0.65 >More info 0.47 >More info control seedlings 10-day old whole seedling Original data GEO bulk
359 ataf1-1 mutant Col-0 Un-inoculated -0.64 >More info -0.48 >More info WT Col-0 Un-inoculated Original data GEO bulk
360 (Ws-2)+100 uM As 0.64 >More info 0.48 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
361 ckh1 CK200 0.61 >More info 0.51 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
362 9 hr Hypoxia Total RNA 0.53 >More info 0.59 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
363 npr1 sni1 SA 0.59 >More info 0.53 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
364 ERF96OE 0.65 >More info 0.47 >More info WT leaf Original data
365 WT no Pi 0.63 >More info 0.49 >More info WT complete seedlings Original data
366 WT +Pep2 2h 0.77 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
367 whole roots -Fe 48 hour 0.58 >More info 0.54 >More info whole roots standard Original data GEO bulk
368 nia1nia2noa1-2 0.60 >More info 0.52 >More info Col-0 whole seedlings Original data GEO bulk
369 ISOXABEN -0.48 >More info -0.64 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
370 seedling h S Exp -0.45 >More info -0.66 >More info seedling -S Exp seedling Original data
371 AFB1 0h 0.62 >More info 0.49 >More info Col 0h Leaf Original data GEO bulk
372 Pto inoculated 0.59 >More info 0.52 >More info col Original data GEO bulk
373 Time-0 chr11-1chr17-1 -0.51 >More info -0.60 >More info Time-0 Col-0 leaf explants Original data
374 aerial organ callus inducing medium 24h 0.58 >More info 0.53 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
375 Atwrky63 -0.64 >More info -0.46 >More info Col0 none leaf Original data GEO bulk
376 Leafminer locally damaged thaliana seedlings 0.66 >More info 0.44 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
377 ein5-1 ski2-3 0.59 >More info 0.51 >More info Col-0 aerial tissue Original data
378 shoot-10 μM DEX- 6 hr 0.56 >More info 0.54 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
379 inhibitor A Treated 0.56 >More info 0.54 >More info Negative Control Original data GEO bulk
380 Whole root - low pH 6H 0.47 >More info 0.63 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
381 Col in Pi deficiency medium 0.41 >More info 0.68 >More info Col in control medium root Original data GEO bulk
382 edr1 0 h powdery mildew 0.51 >More info 0.58 >More info Col-0 0 h powdery mildew Original data GEO bulk
383 abi4-102 (II) 0.58 >More info 0.51 >More info Col (II) rosette Original data GEO bulk
384 pnp1-1 1wk +P 0.60 >More info 0.49 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
385 pmr4-1 control 0.51 >More info 0.58 >More info WT control uninoculated Original data GEO bulk
386 E.orontii Infection 3 day 0.39 >More info 0.70 >More info Uninfection 3 day Original data Elicitor treatments
387 Nicotinamide-85hr 0.56 >More info 0.52 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
388 whole roots -Fe 72 hour 0.57 >More info 0.51 >More info whole roots standard Original data GEO bulk
389 WT H2O2 3h 0.58 >More info 0.50 >More info WT water 3h 3h_H2O2 Original data GEO bulk
390 Fe starvation 72 h 0.57 >More info 0.51 >More info Control Original data GEO bulk
391 lht1 untreated 0.51 >More info 0.57 >More info WT untreated untreated leaf Original data GEO bulk
392 sicy-192 gun1-101 cotyledons 0.55 >More info 0.53 >More info WT cotyledons cotyledons Original data
393 eds16 whole leaf 7dpi -0.43 >More info -0.65 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
394 Atss3 Light4 -0.54 >More info -0.53 >More info Atss3 Dark0.5 Original data GEO bulk
395 SCR-GR Time 12H Dex 0.62 >More info 0.45 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
396 KO-nudx19 leaves 0.45 >More info 0.62 >More info WT leaves rosette leaves Original data
397 Laer pretreat GA+JA Flg22 0h 0.69 >More info 0.38 >More info Laer pretreat water control leaf discs Original data GEO bulk
398 col-5 hrpA 2h 0.58 >More info 0.49 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
399 aox1a(line) MLD stressed 0.59 >More info 0.48 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
400 coi1-2 JA 0.49 >More info 0.58 >More info JA Whole seedling Original data GEO bulk
401 ani1 T0.5 -0.53 >More info -0.53 >More info WT T0.5 root tissue Original data GEO bulk
402 Whole root - low pH 24H 0.51 >More info 0.55 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
403 tunicamycin -0.57 >More info -0.49 >More info DMF Original data GEO bulk
404 tZ -0.55 >More info -0.51 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
405 bak1-3 +Pep2 2h 0.47 >More info 0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
406 col-5 hrpA 4h 0.50 >More info 0.55 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
407 Laer pretreat GA Flg22 0h 0.71 >More info 0.34 >More info Laer pretreat water control leaf discs Original data GEO bulk
408 seedling 6h after HZE WT 0.62 >More info 0.43 >More info seedling day 1 unirradiated WT 6h Original data
409 Col leaves 48h LT 0.64 >More info 0.41 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
410 Selenate (root) 0.52 >More info 0.53 >More info Ws (root) Original data GEO bulk
411 scrm-D 0.54 >More info 0.51 >More info Col-0 WT whole seedling Original data GEO bulk
412 Root Selenate 0.52 >More info 0.53 >More info Root control 40 micromolar selenate Root Original data GEO bulk
413 9m.KNO3 0.52 >More info 0.53 >More info To. KNO3 14 day old Roots Original data GEO bulk
414 cngc4 0.50 >More info 0.55 >More info Ws-2 Seedlings Original data GEO bulk
415 gpa1-4/agb1-2 ozone 2d -0.38 >More info -0.67 >More info Col ozone 2d ozone Original data GEO bulk
416 sfr3 cold 0.49 >More info 0.56 >More info WT cold All aerial tissue Original data GEO bulk
417 BLM 0.49 >More info 0.56 >More info CK BLM seedling Original data
418 irradiated leaf (cmt 5d) 0.54 >More info 0.50 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
419 30m light -0.54 >More info -0.50 >More info before light whole seedlings Original data GEO bulk
420 35:SUB1A 0.59 >More info 0.45 >More info WT whole seedling Original data GEO bulk
421 Dark 6h ivd 0.61 >More info 0.43 >More info 0h ivd Original data
422 WT +Pep2 10h 0.60 >More info 0.44 >More info WT untreated Pep2 Original data GEO bulk
423 gul2-1 mutant 0.61 >More info 0.43 >More info WT 7 day-old whole seedlings Original data
424 toc1-1-57hr 0.52 >More info 0.52 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
425 12m.KCl 0.44 >More info 0.60 >More info To. KCl 14 day old Roots Original data GEO bulk
426 2 hr Hypoxia Total RNA 0.49 >More info 0.55 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
427 WT 1mM phosphate 8 hours. -0.49 >More info -0.55 >More info WT control (not supplemented). Original data
428 Col-0 2HS 0.41 >More info 0.63 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
429 TiO2 germinant -0.48 >More info -0.56 >More info Millipore Water germinant TiO2 seedling Original data
430 ORS1 induced 0.67 >More info 0.36 >More info mock-induced rosette leaves Original data GEO bulk
431 Col-0 flu HL 3h 0.58 >More info 0.45 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
432 Bur-0-3h IAA 0.59 >More info 0.44 >More info Bur-0h IAA whole plant Original data GEO bulk
433 rosette Light Wounded 0.49 >More info 0.54 >More info rosette Light Control Original data GEO bulk
434 12h-DC3000 avrRpm1 0.45 >More info 0.58 >More info 12h-DC3000 leaves Original data GEO bulk
435 iae1 -0.46 >More info -0.57 >More info B179 Original data GEO bulk
436 IAA/inhibitor A Treated 0.50 >More info 0.52 >More info IAA Treated Original data GEO bulk
437 Nicotinamide-89hr 0.54 >More info 0.48 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
438 cell culture 4 h phytoprostane A1 0.50 >More info 0.52 >More info cell culture 4 h control Original data GEO bulk
439 AAF-OX 0.59 >More info 0.43 >More info Col-0 Rosette leaf Original data GEO bulk
440 MIL4 ox BTH 0.56 >More info 0.46 >More info Col BTH Original data GEO bulk
441 Col(gl) leaf 0mM NaCl 0.43 >More info 0.59 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
442 M6PR transgenic leaf 0mM NaCl 0.40 >More info 0.62 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
443 leaf rlt1-1rlt2-1 -0.42 >More info -0.60 >More info leaf Col-0 leaf Original data GEO bulk
444 Col(gl) 0mM NaCl 0.43 >More info 0.59 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
445 Tsu-1 -Fe 24h 0.45 >More info 0.57 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
446 Tsu -Fe 24h Roots 0.45 >More info 0.57 >More info Tsu +Fe 24h Roots Original data GEO bulk
447 MYB12OX 0.49 >More info 0.53 >More info Col-0 aerial part Original data
448 Nicotinamide-61hr 0.59 >More info 0.42 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
449 Bay-0-30min IAA 0.65 >More info 0.36 >More info Bay-0-0h IAA whole plant Original data GEO bulk
450 AZC 0.57 >More info 0.44 >More info noneHS Original data GEO bulk
451 OE-HRA1 NS  0.56 >More info 0.45 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
452 rsa3-1 Na 24h 0.34 >More info 0.67 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
453 dorn1-1 Root 100 mM ATP 30 min -0.37 >More info -0.64 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
454 FOX line K16331 0.50 >More info 0.50 >More info empty vector control (T3) FOX lines Original data GEO bulk
455 pad2-PsmES4326-24hpi -0.54 >More info -0.46 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
456 root columella root cap pH4.6 0.53 >More info 0.47 >More info root columella root cap pH5.7 Original data GEO bulk
457 des1 water 0.50 >More info 0.50 >More info WT water water leaf Original data GEO bulk
458 Tsu -Fe 24h Shoots 0.60 >More info 0.40 >More info Tsu +Fe 24h Shoots Original data GEO bulk
459 -Sulfate 24 h 0.28 >More info 0.72 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
460 K starvation (root) 0.45 >More info 0.55 >More info Ws (root) Original data GEO bulk
461 Col-0 wt Hypoxic 0.48 >More info 0.52 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
462 gpa1 +ABA GC -0.46 >More info -0.54 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
463 npr1 sni1 ssn2 -0.43 >More info -0.57 >More info npr1 sni1 water water seedling Original data GEO bulk
464 HARAP aerobic -0.47 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
465 Root -K 0.45 >More info 0.55 >More info Control-root Original data GEO bulk
466 3x(p) 0.44 >More info 0.56 >More info 2x two week old seedlings Original data
467 NJ15 0.48 >More info 0.52 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
468 pap1-D 0.50 >More info 0.49 >More info Col-0 aerial part Original data
469 Mature callus 0.53 >More info 0.46 >More info Young callus hypocotyls Original data GEO bulk
470 Col-0-3h IAA 0.62 >More info 0.37 >More info Col-0-0h IAA whole plant Original data GEO bulk
471 Mutant ein2(leaf) -0.47 >More info -0.52 >More info Col-0 (leaf) Original data GEO bulk
472 Col-0 norflurazon 0.45 >More info 0.54 >More info Col-0 control Original data GEO bulk
473 OE WRKY63.3 0.37 >More info 0.62 >More info OE WRKY40.4 none leaf Original data GEO bulk
474 col-5 DC3000 4h 0.39 >More info 0.60 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
475 Nicotinamide-93hr 0.52 >More info 0.46 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
476 abh1 -ABA 0.58 >More info 0.40 >More info Col-0 -ABA Original data GEO bulk
477 miR 0h 0.64 >More info 0.34 >More info Col 0h Leaf Original data GEO bulk
478 sex1-3 0.45 >More info 0.53 >More info Col-WT leaves Original data GEO bulk
479 sta1 0.56 >More info 0.41 >More info WT Original data GEO bulk
480 arf2 brz -0.54 >More info -0.43 >More info arf2 mock Original data GEO bulk
481 Bur-0-1h IAA 0.60 >More info 0.37 >More info Bur-0h IAA whole plant Original data GEO bulk
482 FOX line K19624 0.43 >More info 0.54 >More info empty vector control (T3) FOX lines Original data GEO bulk
483 Ws leaf 100mM NaCl 0.46 >More info 0.51 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
484 Ws 100mM NaCl 0.46 >More info 0.51 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
485 Rose Bengal 0.5 uM 0.40 >More info 0.57 >More info Control RB and PER Rose Bengal Original data
486 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.39 >More info -0.58 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
487 FLIGHT TAGESB plate6 ROOTS 0.39 >More info 0.58 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
488 Light 0.56 >More info 0.40 >More info Control Original data GEO bulk
489 gun1-9 norflurazon 0.52 >More info 0.44 >More info gun1-9 control Original data GEO bulk
490 bbx24 in Simulated Shade -0.59 >More info -0.37 >More info WT in simulated shade shade seedling Original data
491 npr1 sni1 ssn2 SA -0.55 >More info -0.41 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
492 C24-1h IAA 0.58 >More info 0.38 >More info C24-0h IAA whole plant Original data GEO bulk
493 WT mitomycin C 0.58 >More info 0.38 >More info WT mock shoot apical meristem Original data
494 WT light -0.53 >More info -0.43 >More info WT dark Original data GEO bulk
495 IXB induced 0.39 >More info 0.57 >More info Methanol IXB Suspension cells Original data GEO bulk
496 anti-sense for AtAOX1a 0.45 >More info 0.51 >More info WT Original data GEO bulk
497 Root dark control 24h 0.43 >More info 0.53 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
498 Heat shock optimum 0.31 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
499 Aerobic e1 ate2 0.46 >More info 0.50 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
500 WT (Col) glucose -0.42 >More info -0.54 >More info WT (Col) glucose seedlings Original data GEO bulk
501 ABA control 0.33 >More info 0.63 >More info No ABA control Original data GEO bulk
502 albino Ds13-2198-1 -0.58 >More info -0.37 >More info control Original data GEO bulk
503 seedling 1.5h after HZE atm-1 0.51 >More info 0.44 >More info seedling day 1 unirradiated atm-1 1.5h Original data
504 rcf1-1 cold 12h 0.54 >More info 0.41 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
505 glk1 glk2 GLK1-GR +DEX 24h -0.75 >More info -0.20 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
506 root hypoxia total 0.37 >More info 0.58 >More info root control total Original data GEO bulk
507 IAA/inhibitor B Treated 0.35 >More info 0.60 >More info IAA Treated Original data GEO bulk
508 phyB mutant 22C 10hrs -0.36 >More info -0.59 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
509 AtMinD1 Prolonged-induction 0.38 >More info 0.57 >More info Control whole plant Original data GEO bulk
510 Root submergence 24h 0.41 >More info 0.54 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
511 pap1-D/tt4 0.44 >More info 0.51 >More info Col-0 aerial part Original data
512 Col-0 2h NAA 0.54 >More info 0.40 >More info Col-0 6h MOCK Original data GEO bulk
513 8-DAC chr11-1chr17-1 0.55 >More info 0.39 >More info 8-DAC Col-0 leaf explants Original data
514 Salicylic Acid 3 h 0.39 >More info 0.55 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
515 Salt Stress 24 h (shoot) 0.51 >More info 0.43 >More info Stress mock 24 h (shoot) Original data Stress treatments
516 pnp1-1 1wk -P 0.71 >More info 0.23 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
517 21h-DC3000 avrRpm1 -0.50 >More info -0.44 >More info 21h-DC3000 leaves Original data GEO bulk
518 Compost 0.51 >More info 0.43 >More info Perlite Compost Original data GEO bulk
519 Apex mir-3TCP 14DAS -0.37 >More info -0.57 >More info Apex Col 14DAS Original data GEO bulk
520 Col whole leaf 1dpi -0.29 >More info -0.65 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
521 WT Root-Pi 0.42 >More info 0.52 >More info WT Root+Pi roots Original data GEO bulk
522 siliques AtHb1 control 0.42 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
523 Oxidative Stress 3 h (root) -0.40 >More info -0.53 >More info Stress mock 3 h (root) Original data Stress treatments
524 3x(m) 0.28 >More info 0.65 >More info 2x two week old seedlings Original data
525 csn3-1 light 0.57 >More info 0.36 >More info WT light Original data GEO bulk
526 calcicole ecotype Cal-0 0.71 >More info 0.22 >More info Col-4 1 mM CaCl2 Original data GEO bulk
527 cdkf:1-2 0.50 >More info 0.43 >More info wt seedling young seedlings Original data GEO bulk
528 ulp1c ulp1d +Pto 0.50 >More info 0.43 >More info ulp1c ulp1d mock Original data GEO bulk
529 Col-0 SA 0.59 >More info 0.34 >More info Col-0 Original data GEO bulk
530 eds16 whole leaf 7d UI -0.36 >More info -0.57 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
531 eds16 whole leaf 1dpi -0.30 >More info -0.63 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
532 roottip hypoxia total 0.35 >More info 0.58 >More info roottip control total Original data GEO bulk
533 rosette leaves lcr 0.53 >More info 0.39 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
534 4h decapitation -0.26 >More info -0.66 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
535 root longitudinal zone-1 low sulfur -0.38 >More info -0.54 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
536 35S::MBF1c 0.40 >More info 0.52 >More info control Original data GEO bulk
537 35S:CDO1 normoxia 0.36 >More info 0.56 >More info WT normoxia normoxia whole rosette Original data
538 WT roots - Fe 0.70 >More info 0.22 >More info WT roots + Fe Roots Original data GEO bulk
539 WT seedlings MV 0.53 >More info 0.38 >More info WT seedlings control Seedlings Original data GEO bulk
540 SCR-GR Time 3H Dex 0.56 >More info 0.35 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
541 overexpresser LBD37 in -N -0.50 >More info -0.41 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
542 Laer pretreat GA+JA Flg22 1h 0.60 >More info 0.31 >More info Laer pretreat water control leaf discs Original data GEO bulk
543 Cd 24h root -0.57 >More info -0.34 >More info WT-Untreated Shoot Original data GEO bulk
544 Imbibed 1 h (seed) 0.20 >More info 0.71 >More info Dry seed Original data Time course of early seed germination
545 aba1 hypocotyl 0.41 >More info 0.50 >More info Ler hypocotyl hypocotyl Original data GEO bulk
546 HSP90 Reduced RNAi-B1 0.41 >More info 0.50 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
547 gun1-1 -lincomycin -0.52 >More info -0.38 >More info Col-0 -lincomycin Original data GEO bulk
548 expressing C2 MeJA -0.40 >More info -0.50 >More info LUC2T Original data GEO bulk
549 atgsnor1-1-avrB-6h 0.37 >More info 0.53 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
550 Root wt CLE10 0.22 >More info 0.68 >More info Root wt CLE25 root tip Original data GEO bulk
551 atmyc2 cop1 Seedling BL 0.28 >More info 0.62 >More info WT Seedling BL Original data GEO bulk
552 A. lyrata -0.35 >More info -0.55 >More info A. thaliana mature leaves before flowering Original data GEO bulk
553 OE-HRA1 2HS  0.58 >More info 0.32 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
554 Whole root - low pH 3H 0.32 >More info 0.58 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
555 FLIGHT TAGESB plate 0.56 >More info 0.33 >More info GROUND CONTROL TAGESB plate Original data
556 atmospheric CO2 high Mg shoot 0.50 >More info 0.39 >More info atmospheric CO2 normal Mg shoot Shoot Original data
557 agb1 gpa1 -ABA GC -0.50 >More info -0.39 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
558 GST-overexpression seedlings control 0.53 >More info 0.36 >More info WT seedlings control Seedlings Original data
559 PstDC3000 48h 0.27 >More info 0.62 >More info WT untreated 48hr leaf Original data GEO bulk
560 MYB12OX/tt4 0.39 >More info 0.50 >More info Col-0 aerial part Original data
561 tor mutant 0.52 >More info 0.36 >More info WT (Col) none seedlings Original data GEO bulk
562 Rsch CA -0.53 >More info -0.35 >More info Col CA Leaves Original data
563 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.71 >More info -0.17 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
564 Mutant axr3-1 (IAA) 0.25 >More info 0.63 >More info Col (IAA) Original data GEO bulk
565 root longitudinal zone-4 pH 4.6 0.38 >More info 0.50 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
566 CHLM overexpression -0.38 >More info -0.50 >More info Col-0 estr green tissue Original data GEO bulk
567 rosette Dark Wounded 0.56 >More info 0.31 >More info rosette Dark Control Original data GEO bulk
568 Heat and anoxia 0.32 >More info 0.55 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
569 rGRF 0.36 >More info 0.51 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
570 light -0.68 >More info -0.18 >More info dark light seedling Original data GEO bulk
571 Wounding Stress3 h (shoot) 0.52 >More info 0.34 >More info Stress mock 3 h (shoot) Original data Stress treatments
572 hst5 0.33 >More info 0.53 >More info Col-0 Original data GEO bulk
573 plant (tga2-5-6) 4h control 0.51 >More info 0.35 >More info plant (Col-0) 4h control Original data GEO bulk
574 Mutant tga2_5_6 0.51 >More info 0.35 >More info Col-0 Original data GEO bulk
575 vte2 leaves 48h LT 0.59 >More info 0.27 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
576 AtMYB30-ox 90-105 min Xanthomonas 0.62 >More info 0.24 >More info WT 90-105 min Xanthomonas Original data GEO bulk
577 Tsu -Fe 48h Shoots 0.36 >More info 0.50 >More info Tsu +Fe 24h Shoots Original data GEO bulk
578 dcl3-1 0.29 >More info 0.57 >More info Col-0 Original data GEO bulk
579 whole roots 140 mM NaCl 1 hour 0.53 >More info 0.32 >More info whole roots standard Original data GEO bulk
580 root - 01% oxygen - 2h 0.29 >More info 0.56 >More info root - 21% oxygen - 2h Original data GEO bulk
581 AFB1 0h 0.31 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
582 high-R:FR bud axillary -0.31 >More info -0.54 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
583 apk1 apk2 0.50 >More info 0.35 >More info Col0-control whole rosette Original data GEO bulk
584 seedling 1.5h after Gamma atm-1 0.61 >More info 0.24 >More info seedling day 1 unirradiated atm-1 1.5h Original data
585 IAA7mII over-expressor IAA Treated 0.16 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
586 des1.1 0.27 >More info 0.58 >More info Leaves-WT leaf Original data GEO bulk
587 6h volatiles Sm. R3089 0.27 >More info 0.58 >More info 6h untreated whole seedling Original data GEO bulk
588 arp6-10 24h at 27 ºC 0.52 >More info 0.32 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
589 Laer pretreat GA+JA Flg22 2h 0.55 >More info 0.29 >More info Laer pretreat water control leaf discs Original data GEO bulk
590 rcf1-1 cold 0h 0.54 >More info 0.30 >More info WT cold 0h Control seedlings Original data GEO bulk
591 Sha-3h IAA 0.57 >More info 0.27 >More info Sha-0h IAA whole plant Original data GEO bulk
592 C24 UV1 -0.60 >More info -0.24 >More info C24 mock UV seedling Original data
593 Cold Stress 24 h (shoot) 0.56 >More info 0.27 >More info Stress mock 24 h (shoot) Original data Stress treatments
594 tt4 -0.54 >More info -0.29 >More info WT aerial region Original data GEO bulk
595 SCL3 OE -0.33 >More info -0.50 >More info Col-0 whole root Original data GEO bulk
596 AsAKiin11 T2 0.31 >More info 0.52 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
597 penta Control 0.59 >More info 0.24 >More info Laer Control leaf discs Original data GEO bulk
598 aba2 1% sucrose 12-day-old 0.58 >More info 0.25 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
599 abi4-102 (I) 0.56 >More info 0.26 >More info Col (I) rosette Original data GEO bulk
600 WT zebularine 5d -0.55 >More info -0.27 >More info WT mock 5d shoot apical meristem Original data
601 psae1-3 stn7-1 0.52 >More info 0.30 >More info WS rosette leaves Original data GEO bulk
602 WT resupplied Pi 4h 0.55 >More info 0.27 >More info WT complete seedlings Original data
603 C24 24h cold -0.51 >More info -0.31 >More info Col 24h cold leaf Original data GEO bulk
604 OsSAP11 expressing -0.32 >More info -0.50 >More info WT seedlings Original data GEO bulk
605 SA Treated 0.74 >More info 0.08 >More info Water Original data GEO bulk
606 GO5; 0h switch to ambient CO2 concentrations; -0.66 >More info -0.15 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
607 sav1-1 light 0.53 >More info 0.28 >More info Col-0 light seedlings Original data GEO bulk
608 xrn4-5 flower -0.54 >More info -0.27 >More info Col-0 flower inflorescence Original data GEO bulk
609 Split KNO3 roots - 2days -0.25 >More info -0.56 >More info Split KCl roots - 2days 5mM KNO3 on ONE side for 2 days roots Original data GEO bulk
610 mtf1-1 -0.28 >More info -0.53 >More info Col0 root Original data
611 Laer pretreat JA Flg22 1h 0.67 >More info 0.13 >More info Laer pretreat water control leaf discs Original data GEO bulk
612 WT NAA 1h 0.50 >More info 0.30 >More info WT 0h Leaf tissue Original data GEO bulk
613 Col-0 DCA 6d 0.55 >More info 0.25 >More info Col-0 MOCK 6d Original data GEO bulk
614 penta Pst DC3000 12hpi 0.54 >More info 0.26 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
615 psae1-3 -0.24 >More info -0.56 >More info WS rosette leaves Original data GEO bulk
616 HRE1-RNAi20 hypoxia 6 hrs 0.28 >More info 0.52 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
617 SA 3h 0.15 >More info 0.65 >More info EtOH 3h 3hr Original data GEO bulk
618 Lip0 UV 0.59 >More info 0.21 >More info Lip0 mock UV seedling Original data
619 Selenate (shoot) 0.27 >More info 0.52 >More info Ws (shoot) Original data GEO bulk
620 agb1 -ABA LF 0.29 >More info 0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
621 Shoot Selenate 0.27 >More info 0.52 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
622 ABA SA 24h 0.09 >More info 0.70 >More info EtOH 24h 24hr Original data GEO bulk
623 1.5 hr ammonium 0.50 >More info 0.28 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
624 gpa1 -ABA LF 0.52 >More info 0.26 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
625 Leafminer systemically damaged thaliana seedlings 0.52 >More info 0.26 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
626 Col-0 (t-zeatin 3 h) -0.20 >More info -0.57 >More info Col-0 Original data Cytokinin treatment of seedlings
627 Mutant axr3-1 0.20 >More info 0.57 >More info Col Original data GEO bulk
628 vte2-1 1d vernalization 0.24 >More info 0.53 >More info WT 1d vernalization Original data GEO bulk
629 Leaf wounded 0.22 >More info 0.55 >More info Leaf control vegetative leaf Original data GEO bulk
630 penta MeJA 1h 0.63 >More info 0.13 >More info Laer MeJA 1h leaf discs Original data GEO bulk
631 Cold Stress 24 h (root) 0.51 >More info 0.25 >More info Stress mock 24 h (root) Original data Stress treatments
632 Laer pretreat JA Flg22 2h 0.63 >More info 0.13 >More info Laer pretreat water control leaf discs Original data GEO bulk
633 Laer GA 1h 0.26 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
634 RRE2 Chitin 0.50 >More info 0.25 >More info Chitin Original data GEO bulk
635 flu dark 8hours/30 minute light 0.16 >More info 0.59 >More info col dark 8hours/30 minute light Original data GEO bulk
636 CHS-silenced type -0.52 >More info -0.22 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
637 Col-0 24hpi A. brassicicola 0.72 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
638 anac017-2 H2O2 3h -0.58 >More info -0.16 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
639 toc1-1-81hr 0.24 >More info 0.50 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
640 Bay-0-3h IAA 0.56 >More info 0.17 >More info Bay-0-0h IAA whole plant Original data GEO bulk
641 rosettes WT drought 0.50 >More info 0.23 >More info rosettes WT watered Original data GEO bulk
642 toc1-1-73hr 0.22 >More info 0.51 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
643 Chemically 0.18 >More info 0.55 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
644 nas4x leaves + Fe 0.56 >More info 0.16 >More info WT leaves + Fe Leaves Original data GEO bulk
645 root cap pGL2(root cap pGL2BRI1) 0h BL 0.50 >More info 0.22 >More info WR 35S 0h BL brassinosteroid root Original data
646 HairpinZ 4 h (leaf) 0.75 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
647 axr2-BR -0.51 >More info -0.21 >More info BR BR dark-grown seedlings Original data GEO bulk
648 Protoplast Induced 0.21 >More info 0.50 >More info Uninduced Original data GEO bulk
649 24h light (+Lincomycin) 0.20 >More info 0.51 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
650 Laer pretreat GA Flg22 2h 0.53 >More info 0.17 >More info Laer pretreat water control leaf discs Original data GEO bulk
651 A2hsfa1-ox in quadruple mutant -0.52 >More info -0.18 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
652 gun5 control 0.19 >More info 0.51 >More info Col-0 control Original data GEO bulk
653 wnk8-1 untreated -0.20 >More info -0.50 >More info Col-0 untreated seedlings Original data GEO bulk
654 total mRNA eif3k 0.20 >More info 0.50 >More info total mRNA WT aerial part Original data GEO bulk
655 15m light -0.53 >More info -0.16 >More info before light whole seedlings Original data GEO bulk
656 ago4-1 0.51 >More info 0.18 >More info WT La-er whole plants Original data GEO bulk
657 WT 3H Cold 0.18 >More info 0.50 >More info WT control Original data GEO bulk
658 Cs shoot -0.06 >More info -0.62 >More info control shoot Original data GEO bulk
659 Sha-1h IAA 0.53 >More info 0.14 >More info Sha-0h IAA whole plant Original data GEO bulk
660 Light 3day ivd 0.56 >More info 0.11 >More info 0h ivd Original data
661 ABA JA 24h -0.01 >More info 0.68 >More info EtOH 24h 24hr Original data GEO bulk
662 NahG 0.01 >More info -0.68 >More info Col-0 Leaves Original data GEO bulk
663 t-zeatin 0.5 h -0.10 >More info -0.57 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
664 Col PSTDC3000 24h 0.78 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
665 vte2 leaves 120h LT 0.61 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
666 sid2-2 safener -0.14 >More info -0.51 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
667 Shoot submergence 7h 0.64 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
668 seedling 3h after HZE WT 0.62 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
669 pvip1 pvip2 seedling 0.66 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
670 opr3 OPDA 0.5 h 0.03 >More info 0.61 >More info opr3 0 h Original data GEO bulk
671 16C 4hs -0.02 >More info -0.61 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
672 46T-CK 0.12 >More info 0.51 >More info WT-CK none Original data
673 ckh2 CK25 0.50 >More info 0.12 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
674 P. infestans 6 h (leaf) 0.76 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
675 pif3 Dark 0h -0.53 >More info -0.08 >More info WT Dark 0h etiolated seedling Original data GEO bulk
676 IAA 1 h 0.50 >More info 0.09 >More info Mock 1 h Original data Basic hormone treatment of seedlings
677 Red/FR Light45min -0.18 >More info 0.76 >More info FarRed Light 45min Original data Light treatments
678 SA 24h 0.03 >More info 0.54 >More info EtOH 24h 24hr Original data GEO bulk
679 arr10 arr12 -0.55 >More info -0.01 >More info DMSO--WT DMSO roots Original data GEO bulk
680 Mutant sav3-2 (WL) -0.11 >More info 0.67 >More info Col-0 (WL) Original data GEO bulk
681 seed germinating in countinuous light 24h SL -0.11 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
682 sav3-2 light -0.11 >More info 0.67 >More info Col-0 light seedlings Original data GEO bulk
683 CCA1-ox 6am non-polysomal 0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
684 shoots WT 0uM Fe 0.55 >More info 0.00 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
685 root - 08% oxygen - 30min -0.14 >More info 0.67 >More info root - 21% oxygen - 30min Original data GEO bulk
686 Col-0 +lincomycin 0.03 >More info 0.50 >More info Col-0 -lincomycin Original data GEO bulk
687 shl-2 Pool 0.01 >More info 0.52 >More info Ler Pool seedling Original data GEO bulk
688 DUO1 induced 6h -0.58 >More info 0.09 >More info 6hr-not-induced whole plant Original data GEO bulk
689 FarRed Light 45min 0.13 >More info -0.61 >More info White Light 45min Original data Light treatments
690 nas4x roots - Fe -0.50 >More info 0.05 >More info WT roots - Fe Roots Original data GEO bulk
691 Root P recovery 0.58 >More info -0.16 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
692 Root -P -0.62 >More info 0.24 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
693 Shoot apex inflorescence (after bolting) -0.27 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
694 bri1-116 -0.36 >More info 0.73 >More info Col seedling Original data GEO bulk
695 Shoot P recovery 0.54 >More info -0.21 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
696 Blue Light 4 h 0.53 >More info -0.21 >More info White Light 4 h Original data Light treatments
697 root - 08% oxygen - 2h -0.26 >More info 0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
698 irradiated leaf (WT 5d) 0.26 >More info -0.53 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
699 Mh0 UV -0.62 >More info 0.39 >More info Mh0 mock UV seedling Original data
700 WT Red light 1h 0.55 >More info -0.37 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
701 root - 04% oxygen - 30min -0.53 >More info 0.40 >More info root - 21% oxygen - 30min Original data GEO bulk
702 root - 04% oxygen - 2h -0.51 >More info 0.57 >More info root - 21% oxygen - 2h Original data GEO bulk
703 Light 3day hml -0.51 >More info 0.46 >More info 0h hml Original data
704 Shoot -P -0.56 >More info 0.61 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk