4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on AgNO3 3 h
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List of experiments correlated with "AgNO3 3 h "  Help Download transcriptome of top 30
Score Experiment Correlation from
AgNO3 3 h 		Correlation to
AgNO3 3 h 		Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 AgNO3 3 h 1.00 >More info 1.00 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
2 TNT-seedlings 0.83 >More info 0.88 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
3 5-Triiodobenzoic acid3 h 0.86 >More info 0.82 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
4 P.p 30hai 0.86 >More info 0.82 >More info At-Control roots Original data GEO bulk
5 root Dosed gold 0.87 >More info 0.79 >More info root No gold .125 mM gold 24 h roots Original data
6 0.125 mM gold 24 h 0.87 >More info 0.79 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
7 P.p 6hai 0.84 >More info 0.80 >More info At-Control roots Original data GEO bulk
8 P.p 10.5hai 0.82 >More info 0.80 >More info At-Control roots Original data GEO bulk
9 WT+H2O2 0.80 >More info 0.81 >More info WT H2O2 Original data GEO bulk
10 Fenclorim 4hr 0.82 >More info 0.79 >More info Acetone 4hr root Original data GEO bulk
11 Chitosan 3h Treatment 0.84 >More info 0.77 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
12 Seedling KUA1-IOX est 0.83 >More info 0.76 >More info Seedling KUA1-IOX mock Original data
13 DFPM 0.82 >More info 0.76 >More info control Original data GEO bulk
14 CeO2 germinant -0.79 >More info -0.79 >More info Millipore Water germinant CeO2 seedling Original data
15 seedlings-week-old RECA1-overexpressing
transgenic		 0.78 >More info 0.80 >More info seedlings-week-old Col-0 seedlings Original data
16 pepr1-1 Pepr2-3 +Pep2 2h -0.76 >More info -0.81 >More info WT +Pep2 2h Pep2 Original data GEO bulk
17 R. solani AG8 0.81 >More info 0.76 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
18 PNO8 3 h 0.74 >More info 0.83 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
19 toc1-1-53hr 0.83 >More info 0.74 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
20 bak1-3 +Pep2 10h 0.82 >More info 0.74 >More info WT +Pep2 10h Pep2 Original data GEO bulk
21 P.p 2.5hai 0.80 >More info 0.76 >More info At-Control roots Original data GEO bulk
22 pepr1-1 Pepr2-3 +Pep2 10h -0.77 >More info -0.78 >More info WT +Pep2 10h Pep2 Original data GEO bulk
23 seedlings protease IV 0.77 >More info 0.78 >More info seedlings nontreated control whole seedling Original data
24 CMP 4hr 0.80 >More info 0.75 >More info Acetone 4hr root Original data GEO bulk
25 oligomycin 4 h 0.81 >More info 0.73 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
26 chito-tetramer 0.80 >More info 0.73 >More info Col Mock Original data GEO bulk
27 col-5 hrpA 12h 0.74 >More info 0.79 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
28 Phytoprostane A1 4 h 0.79 >More info 0.73 >More info Col-0 Original data GEO bulk
29 Col-0 9 hpi A. brassicicola 0.74 >More info 0.78 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
30 Cycloheximide 3 h 0.77 >More info 0.75 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
31 R. solani AG2-1 0.80 >More info 0.71 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
32 plant (tga2-5-6) 4h phytoprostane A1 0.82 >More info 0.69 >More info plant (tga2-5-6) 4h control Original data GEO bulk
33 B.cinerea 18 h infection 0.69 >More info 0.82 >More info Mock 18 h Original data Botrytis cinerea infection
34 Botrytis cinerea 18h 0.69 >More info 0.82 >More info control 18h Original data GEO bulk
35 ani1 T0.5 -0.77 >More info -0.73 >More info WT T0.5 root tissue Original data GEO bulk
36 chito-octamer 0.77 >More info 0.73 >More info Col Mock Original data GEO bulk
37 Col-0 low oxygen 0.78 >More info 0.72 >More info Col-0 control low oxygen root Original data GEO bulk
38 SA 0.78 >More info 0.72 >More info WT mock Whole seedling Original data GEO bulk
39 Col-0 V. longisporum-inoculated 48 hpi 0.76 >More info 0.74 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
40 ataf1-1 mutant Col-0 Bgh inoculated 0.70 >More info 0.80 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
41 WT Col-0 Bgh inoculated 0.69 >More info 0.81 >More info WT Col-0 Un-inoculated Original data GEO bulk
42 toc1-1-77hr 0.84 >More info 0.65 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
43 GST NPP1 4 h (leaf) 0.71 >More info 0.78 >More info Mock 4 h (leaf) Original data Elicitor treatments
44 anac017-2 AntimycinA 3h -0.74 >More info -0.75 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
45 Chemically 0.66 >More info 0.83 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
46 CMP 24hr 0.79 >More info 0.70 >More info Acetone 24hr root Original data GEO bulk
47 toc1-1-49hr 0.82 >More info 0.66 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
48 ein2-1 9 hpi A. brassicicola 0.73 >More info 0.75 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
49 WT-NOCO2 INFECTED 0.76 >More info 0.72 >More info WT-MOCK Original data GEO bulk
50 toc1-1-57hr 0.79 >More info 0.69 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
51 wavy 0.73 >More info 0.74 >More info WT Original data GEO bulk
52 hrpA 7h 0.71 >More info 0.76 >More info Mock 7h hrpA Original data GEO bulk
53 WT AntimycinA 3h 0.74 >More info 0.73 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
54 9 hr Hypoxia 1 hr recovery Total RNA 0.78 >More info 0.68 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
55 Col ozone 3h 0.62 >More info 0.84 >More info Col clean-air 3h ozone Original data GEO bulk
56 ARR22-ox (t-zeatin 3 h) 0.77 >More info 0.69 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
57 Whole root - low pH 12H 0.77 >More info 0.68 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
58 WT chitooctaose 0.79 >More info 0.66 >More info WT water Original data GEO bulk
59 ice1 control 0.70 >More info 0.75 >More info WT control Original data GEO bulk
60 oas-a1.1 Cd 18h 0.70 >More info 0.74 >More info Cd 18h root Root Original data GEO bulk
61 6-trichlorophenoxyacetic acid 3 h 0.73 >More info 0.71 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
62 Col-0-avrB-6h 0.69 >More info 0.75 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
63 Cocultivation 8 hrs root 0.77 >More info 0.67 >More info Mock cocultivation 8 hrs root Root Original data
64 toc1-1-65hr 0.81 >More info 0.62 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
65 hrcC 0.67 >More info 0.76 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
66 efr-1 +elf18 10h -0.67 >More info -0.76 >More info WT +elf18 10h elf18 Original data GEO bulk
67 9m.KCl 0.75 >More info 0.68 >More info To. KCl 14 day old Roots Original data GEO bulk
68 Shoot -Cs 0.60 >More info 0.83 >More info Control-shoot Original data GEO bulk
69 miR393 flg22 1h 0.69 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
70 toc1-1-85hr 0.70 >More info 0.73 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
71 toc1-1-81hr 0.72 >More info 0.71 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
72 hira-root -0.70 >More info -0.72 >More info WT-root root Original data
73 9 hr Hypoxia Total RNA 0.79 >More info 0.63 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
74 WT 30μM arsenate 8 hours. 0.79 >More info 0.63 >More info WT control (not supplemented). Original data
75 GST 4 h (leaf) 0.63 >More info 0.79 >More info Mock 4 h (leaf) Original data Elicitor treatments
76 flu over-tAPX 0.65 >More info 0.77 >More info WT Col Original data GEO bulk
77 WT +elf18 2h 0.68 >More info 0.73 >More info WT untreated elf18 Original data GEO bulk
78 flu 0.65 >More info 0.76 >More info WT Col Original data GEO bulk
79 E.coli TUV86 2 fliC 7h 0.68 >More info 0.73 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
80 35S::PI ap3-3 35S::AP-GR +DEX 0.61 >More info 0.80 >More info 0hr DEX Original data GEO bulk
81 miR393 flg22 2h 0.65 >More info 0.76 >More info WT 0h Leaf tissue Original data GEO bulk
82 6h +Pi -0.68 >More info -0.73 >More info 6h -Pi root Original data GEO bulk
83 AvrRpt2 Col-0 6hpi 0.72 >More info 0.69 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
84 Nicotinamide-53hr 0.72 >More info 0.69 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
85 WT NAA/flg 1h 0.71 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
86 root cells endodermis 140mM NaCl 3 hours 0.79 >More info 0.61 >More info root cells endodermis standard 1 hour root cells endodermis Original data
87 WT Bc inoculation 14h 0.75 >More info 0.65 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
88 Col upon hypoxia 6 hrs 0.77 >More info 0.63 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
89 Selenate (root) 0.76 >More info 0.64 >More info Ws (root) Original data GEO bulk
90 AFB1 flg22 2h 0.67 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
91 Root Selenate 0.76 >More info 0.64 >More info Root control 40 micromolar selenate Root Original data GEO bulk
92 SCR-GR Time 1H Dex 0.76 >More info 0.64 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
93 IAA/inhibitor B Treated 0.64 >More info 0.76 >More info IAA Treated Original data GEO bulk
94 Oxidative Stress 3 h (root) -0.74 >More info -0.65 >More info Stress mock 3 h (root) Original data Stress treatments
95 WT 2-4h Xanthomonas 0.65 >More info 0.74 >More info WT T0 Original data GEO bulk
96 Ibuprofen 3 h 0.67 >More info 0.72 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
97 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.75 >More info 0.64 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
98 LTN008-2 aza-dc 0.78 >More info 0.61 >More info LTN012-2 Mock Original data
99 Laer Flg22 2h 0.68 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
100 GO5; 8h switch to ambient CO2 concentrations; 0.68 >More info 0.71 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
101 col-5 DC3000 12h 0.67 >More info 0.72 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
102 arf2 mock 0.69 >More info 0.70 >More info Col mock Original data GEO bulk
103 Mutant arf2 (etiol) 0.69 >More info 0.70 >More info Col (etiol) Original data GEO bulk
104 WT flg22 1h 0.69 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
105 WT flg22 2h 0.69 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
106 Laer Flg22 1h 0.66 >More info 0.72 >More info Laer Control leaf discs Original data GEO bulk
107 bbx24 in Simulated Shade -0.83 >More info -0.55 >More info WT in simulated shade shade seedling Original data
108 whole roots -Fe 72 hour 0.77 >More info 0.61 >More info whole roots standard Original data GEO bulk
109 Fe starvation 72 h 0.77 >More info 0.61 >More info Control Original data GEO bulk
110 BLM+INA 0.72 >More info 0.66 >More info CK BLM and INA seedling Original data
111 35S:RPS4 eds1-2 8h -0.67 >More info -0.71 >More info 35S:RPS4 8h leaves Original data
112 sid2-2 9 hpi A. brassicicola 0.72 >More info 0.66 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
113 AFB1 flg22 1h 0.69 >More info 0.69 >More info WT 0h Leaf tissue Original data GEO bulk
114 Col-Luc WT 3h antimycin A 0.69 >More info 0.69 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
115 Sulfometuron EC50 0.70 >More info 0.68 >More info Carrier Original data GEO bulk
116 Nicotinamide-57hr 0.74 >More info 0.64 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
117 Phaseolicola 2 h (leaf) 0.62 >More info 0.75 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
118 Laer Flg22+GA 2h 0.69 >More info 0.68 >More info Laer Control leaf discs Original data GEO bulk
119 (Col-0)+100 uM As 0.71 >More info 0.66 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
120 Col-0 ozone 0.74 >More info 0.63 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
121 Te ozone 0.74 >More info 0.63 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
122 whole roots -Fe 48 hour 0.76 >More info 0.61 >More info whole roots standard Original data GEO bulk
123 tor mutant glucose 0.82 >More info 0.55 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
124 Col whole leaf 5dpi 0.64 >More info 0.73 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
125 35S::ERF104 Flg22 4h 0.63 >More info 0.74 >More info 35S::ERF104 H2O 4h Original data GEO bulk
126 CT101 ozone 0.75 >More info 0.61 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
127 Nicotinamide-81hr 0.74 >More info 0.62 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
128 E.coli 0157 H7 7h 0.66 >More info 0.70 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
129 Botrytis cinerea 48h 0.69 >More info 0.67 >More info control 48h Original data GEO bulk
130 toc1-1-73hr 0.67 >More info 0.69 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
131 col-5 DC3000-avrRpm 4h 0.66 >More info 0.70 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
132 (Col-0)+200 uM As 0.71 >More info 0.65 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
133 coi1-16 ein2 sid2 ctrl -0.74 >More info -0.62 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
134 ABA DFPM 0.78 >More info 0.58 >More info control Original data GEO bulk
135 Leafminer locally damaged thaliana seedlings 0.71 >More info 0.64 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
136 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.74 >More info 0.61 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
137 ice1 6H Cold 0.68 >More info 0.67 >More info WT 6H Cold Original data GEO bulk
138 ceh1 mutant 0.65 >More info 0.70 >More info Parent line Original data
139 hrpA fliC 7h 0.69 >More info 0.66 >More info Mock 7h hrpA fliC Original data GEO bulk
140 til1-1 22C 0.70 >More info 0.65 >More info Col-0 22C Original data GEO bulk
141 oligomycin 1 h 0.67 >More info 0.68 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
142 inhibitor B Treated 0.61 >More info 0.73 >More info Negative Control Original data GEO bulk
143 msh1 albino 0.68 >More info 0.65 >More info WT aerial part Original data GEO bulk
144 root cells cortex 140mM NaCl 3 hours 0.76 >More info 0.57 >More info root cells cortex standard 1 hour root cells cortex Original data
145 Mutant siz1-3 (Drought) 0.68 >More info 0.65 >More info Col-0 (Drought) Original data GEO bulk
146 vte2-1 3d vernalization 0.72 >More info 0.61 >More info WT 3d vernalization Original data GEO bulk
147 inhibitor A Treated 0.63 >More info 0.70 >More info Negative Control Original data GEO bulk
148 siz1-3 drought 0.68 >More info 0.65 >More info Col-0 drought Original data GEO bulk
149 HopZ1a treated 0.59 >More info 0.74 >More info col Original data GEO bulk
150 Elevated CO2 AMPLE N NIGHT 0.64 >More info 0.68 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
151 8hr-pH4.5 0.64 >More info 0.68 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
152 cpr5scv1 0.65 >More info 0.67 >More info WT(COL) Original data GEO bulk
153 plant (Col-0) 4h OPDA 0.77 >More info 0.55 >More info plant (Col-0) 4h control Original data GEO bulk
154 plant (tga2-5-6) 4h OPDA 0.76 >More info 0.56 >More info plant (tga2-5-6) 4h control Original data GEO bulk
155 tunicamycin -0.64 >More info -0.68 >More info DMF Original data GEO bulk
156 Laer Flg22+GA 1h 0.65 >More info 0.67 >More info Laer Control leaf discs Original data GEO bulk
157 cpr5npr1svi1 0.65 >More info 0.67 >More info WT(COL) Original data GEO bulk
158 OPDA 4 h 0.77 >More info 0.55 >More info Col-0 Original data GEO bulk
159 +1.6 mM Tween 20 1 h. 0.54 >More info 0.78 >More info +distilled water 1 h. Original data GEO bulk
160 WT+chitooctaose 0.57 >More info 0.75 >More info WT+water chitooctaose seedlings Original data GEO bulk
161 wrky33 Bc inoculation 14h 0.75 >More info 0.56 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
162 Mutant axr3-1 (IAA) 0.59 >More info 0.72 >More info Col (IAA) Original data GEO bulk
163 rosette Dark Wounded 0.68 >More info 0.63 >More info rosette Dark Control Original data GEO bulk
164 AvrRpm1 2 h (leaf) 0.61 >More info 0.70 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
165 Fenclorim 24hr 0.70 >More info 0.61 >More info Acetone 24hr root Original data GEO bulk
166 root protoplasts 40 mM NaCl 0.67 >More info 0.64 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
167 Mutant axr3-1 0.64 >More info 0.67 >More info Col Original data GEO bulk
168 WT H2O2 3h 0.71 >More info 0.60 >More info WT water 3h 3h_H2O2 Original data GEO bulk
169 low CO2 + light 0.62 >More info 0.69 >More info normal CO2 + light Original data GEO bulk
170 2 hr Hypoxia Total RNA 0.77 >More info 0.54 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
171 Col whole leaf 7dpi 0.59 >More info 0.72 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
172 arf2 brz -0.63 >More info -0.68 >More info arf2 mock Original data GEO bulk
173 PAHs stress 0.67 >More info 0.64 >More info exp control phenanthrene whole plants Original data GEO bulk
174 cpr5npr1 0.65 >More info 0.65 >More info WT(COL) Original data GEO bulk
175 root cells endodermis 140mM NaCl 8 hours 0.76 >More info 0.54 >More info root cells endodermis standard 1 hour root cells endodermis Original data
176 safener treated 0.64 >More info 0.66 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
177 9 hr Hypoxia IP RNA 0.70 >More info 0.60 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
178 Cor 24h 0.61 >More info 0.69 >More info Mock 24h Cor Original data GEO bulk
179 WT-SA 0.59 >More info 0.71 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
180 Cor hrpS 10h 0.58 >More info 0.72 >More info Mock 10h Cor hrpS Original data GEO bulk
181 Primisulfuron EC50 0.65 >More info 0.64 >More info Carrier (primisulfuron) Original data GEO bulk
182 coi1-2 0.64 >More info 0.65 >More info Col-0 mock Whole seedling Original data GEO bulk
183 CMV-WT 0.62 >More info 0.67 >More info Mock-At Aerial tissues Original data GEO bulk
184 bio4-1 mutant watered00µM biotin leaves -0.60 >More info -0.69 >More info bio4-1 mutant leaves leaves Original data GEO bulk
185 Elevated CO2 AMPLE N DAY 0.57 >More info 0.72 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
186 Propiconazole 3 h 0.55 >More info 0.74 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
187 Lipopolysaccaride4 h (leaf) 0.65 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
188 15m.KCl 0.72 >More info 0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
189 WT seedlings MV 0.67 >More info 0.61 >More info WT seedlings control Seedlings Original data GEO bulk
190 Col-0 INA 48h 0.64 >More info 0.64 >More info Col-0 MOCK 48h Original data GEO bulk
191 aba3-1 0.61 >More info 0.67 >More info wt Original data GEO bulk
192 Pst-DC3000(avrRpm1)-4hpi 0.60 >More info 0.68 >More info Pst-DC3000-4hpi Original data GEO bulk
193 cdkf:1-2 0.77 >More info 0.51 >More info wt seedling young seedlings Original data GEO bulk
194 35S:RPS4 eds1-2 24h -0.61 >More info -0.67 >More info 35S:RPS4 24h leaves Original data
195 sni1 0.60 >More info 0.68 >More info WT Original data GEO bulk
196 9m.KNO3 0.73 >More info 0.55 >More info To. KNO3 14 day old Roots Original data GEO bulk
197 A. thaliana-A. lyrata hybrid -0.65 >More info -0.63 >More info A. thaliana mature leaves before flowering Original data GEO bulk
198 root cells endodermis 140mM NaCl 48 hours 0.75 >More info 0.53 >More info root cells endodermis standard 1 hour root cells endodermis Original data
199 coi1-16 ein2 sid2 ozone 0.74 >More info 0.54 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
200 Col0-PsmES4326-24hpi 0.67 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
201 edr1 18 h powdery mildew 0.63 >More info 0.65 >More info Col-0 18 h powdery mildew Original data GEO bulk
202 root cells stele 140mM NaCl 3 hours 0.74 >More info 0.54 >More info root cells stele standard 1 hour root cells stele Original data
203 rsa3-1 Na 24h 0.59 >More info 0.69 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
204 Col-0 under 4 days salt 0.69 >More info 0.59 >More info Col-0 under control 4 days salt treatment rosette Original data
205 pmr5 pmr6 0.58 >More info 0.70 >More info Col-0 Original data GEO bulk
206 S58-2 0.59 >More info 0.69 >More info wt Original data GEO bulk
207 (Ws-2)+100 uM As 0.70 >More info 0.58 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
208 root stele 40 mM NaCls 0.69 >More info 0.59 >More info root stele Original data GEO bulk
209 HopZ1a treated ulp1c ulp1d 0.59 >More info 0.69 >More info col Original data GEO bulk
210 9 hr Hypoxia 1 hr recovery IP RNA 0.69 >More info 0.59 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
211 Whole root - low pH 24H 0.74 >More info 0.53 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
212 Leafminer damaged seedlings 0.71 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
213 dde2-2 9 hpi A. brassicicola 0.69 >More info 0.58 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
214 WT NAA/flg 2h 0.62 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
215 WT +elf18 10h 0.62 >More info 0.65 >More info WT untreated elf18 Original data GEO bulk
216 Triazolopyrimidine EC50 0.66 >More info 0.61 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
217 nia1nia2 0.67 >More info 0.60 >More info Col-0 whole seedlings Original data GEO bulk
218 pvip1 pvip2 0.66 >More info 0.61 >More info Col-0 whole rosettes Original data GEO bulk
219 4d red light grown hmr-5 seedlings 0.70 >More info 0.57 >More info 4d red light grown WT(Col-0) seedlings Original data
220 Nicotinamide-73hr 0.70 >More info 0.57 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
221 del1-1 mutant 5d uninfected 0.63 >More info 0.63 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
222 anac017-1 H2O2 3h -0.67 >More info -0.59 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
223 24h +Pi -0.75 >More info -0.51 >More info 24h -Pi root Original data GEO bulk
224 JA 0.64 >More info 0.62 >More info Col-0 mock Whole seedling Original data GEO bulk
225 Flagellin 4 h (leaf) 0.58 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
226 Salicylic Acid 3 h 0.63 >More info 0.63 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
227 SLWF infested 0.59 >More info 0.67 >More info SLWF uninfested rosette tissue Original data GEO bulk
228 Dex-rga(delta17) 4h GA4 -0.66 >More info -0.59 >More info Vector 4h GA4 shoots Original data GEO bulk
229 whole roots 140 mM NaCl 1 hour 0.71 >More info 0.54 >More info whole roots standard Original data GEO bulk
230 gpa1 -ABA GC -0.53 >More info -0.72 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
231 smg7b-1 0.63 >More info 0.62 >More info WT whole plant Original data GEO bulk
232 WT 3h -P 0.52 >More info 0.73 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
233 pmr5 0.53 >More info 0.72 >More info Col-0 Original data GEO bulk
234 Cor 10h 0.56 >More info 0.68 >More info Mock 10h Cor Original data GEO bulk
235 ckh1 CK200 0.62 >More info 0.62 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
236 cpr5 0.64 >More info 0.60 >More info WT seedling Original data GEO bulk
237 P.syringae AvrRpt2 4 h (leaf) 0.59 >More info 0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
238 IMI 4mM 0.67 >More info 0.57 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
239 dicamba 0.65 >More info 0.59 >More info WT mock whole seedling Original data GEO bulk
240 Dex-rga(delta17) 4h GA4+DEX -0.64 >More info -0.59 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
241 seedlings +5AC 0.72 >More info 0.51 >More info control seedlings 10-day old whole seedling Original data GEO bulk
242 cpr5 0.56 >More info 0.67 >More info WT(COL) Original data GEO bulk
243 gh3.5-1D 48 hpi 0.64 >More info 0.59 >More info Col-0 uninoculated Original data GEO bulk
244 C24 ozone 0.69 >More info 0.54 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
245 DC3000 24h 0.59 >More info 0.64 >More info Mock 24h DC3000 Original data GEO bulk
246 shoots bhlh100/101 0uM Fe 0.66 >More info 0.56 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
247 Mature callus 0.67 >More info 0.55 >More info Young callus hypocotyls Original data GEO bulk
248 csn5 (csn5a-2 csn5b) light 0.66 >More info 0.56 >More info WT light Original data GEO bulk
249 Col-0 DCA 48h 0.54 >More info 0.68 >More info Col-0 MOCK 48h Original data GEO bulk
250 npr1-1 SA -0.61 >More info -0.61 >More info Col-0 SA complete seedling Original data
251 INA 0.57 >More info 0.65 >More info CK INA seedling Original data
252 SCR-GR Time 12H Dex 0.70 >More info 0.52 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
253 Dex-rga(delta17) 2h GA4+DEX -0.64 >More info -0.58 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
254 Col-0 C2H4 24h 0.62 >More info 0.60 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
255 Col-0 2HS 0.70 >More info 0.51 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
256 rcf1-1 cold 24h 0.64 >More info 0.57 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
257 DC3000 2 h (leaf) 0.55 >More info 0.66 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
258 root cells cortex 140mM NaCl 8 hours 0.69 >More info 0.52 >More info root cells cortex standard 1 hour root cells cortex Original data
259 CMV-A2b mutant 0.54 >More info 0.67 >More info Mock-At Aerial tissues Original data GEO bulk
260 Mutant gh3.5-1D (AvrRpt2) 0.61 >More info 0.60 >More info Col-0 (AvrRpt2) Original data GEO bulk
261 gai Control 0.66 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
262 vtc1 (II) 0.63 >More info 0.58 >More info Col (II) rosette Original data GEO bulk
263 roottip hypoxia total 0.71 >More info 0.50 >More info roottip control total Original data GEO bulk
264 WT powdery mildew 0.56 >More info 0.65 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
265 Root -K 0.60 >More info 0.61 >More info Control-root Original data GEO bulk
266 SCR-GR Time 3H Dex 0.70 >More info 0.51 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
267 Osmotic Stress 24 h (shoot) 0.64 >More info 0.56 >More info Stress mock 24 h (shoot) Original data Stress treatments
268 TiO2 germinant -0.67 >More info -0.53 >More info Millipore Water germinant TiO2 seedling Original data
269 S15-118 0.55 >More info 0.65 >More info wt Original data GEO bulk
270 plant (Col-0) 4h phytoprostane A1 0.64 >More info 0.56 >More info plant (tga2-5-6) 4h control Original data GEO bulk
271 arr-dmso-sample 0.62 >More info 0.58 >More info Wt-dmso-sample seedling Original data
272 root cells stele 140mM NaCl 8 hours 0.73 >More info 0.47 >More info root cells stele standard 1 hour root cells stele Original data
273 Nicotinamide-49hr 0.69 >More info 0.51 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
274 K starvation (root) 0.60 >More info 0.60 >More info Ws (root) Original data GEO bulk
275 Nicotinamide-65hr 0.69 >More info 0.51 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
276 IAA/inhibitor A Treated 0.59 >More info 0.60 >More info IAA Treated Original data GEO bulk
277 eds16 whole leaf 5dpi -0.54 >More info -0.65 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
278 Mutant siz1-3 0.56 >More info 0.63 >More info Col-0 Original data GEO bulk
279 UV Stress 24 h (shoot) 0.53 >More info 0.66 >More info Stress mock 24 h (shoot) Original data Stress treatments
280 siz1-3 control 0.56 >More info 0.63 >More info Col-0 control Original data GEO bulk
281 FLIGHT TAGESB plate6 ROOTS 0.60 >More info 0.59 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
282 mkk1/mkk2 control rep 0.62 >More info 0.57 >More info Col-0 Time 0 rep Original data GEO bulk
283 4C 1h 0.59 >More info 0.60 >More info 4C 0h Original data GEO bulk
284 Nicotinamide-85hr 0.67 >More info 0.51 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
285 Root -Cs 0.64 >More info 0.54 >More info Control-root Original data GEO bulk
286 cat2-2; 8h switch to ambient CO2 concentrations; 0.54 >More info 0.64 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
287 Col-0 flu HL 3h 0.56 >More info 0.62 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
288 gun1gun5 far-red pretreated -0.55 >More info -0.63 >More info WT far-red pretreated Original data GEO bulk
289 Laer treat paclobutrazol (PAC) 0.56 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
290 Heat shock optimum 0.53 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
291 RRE2 Chitin 0.61 >More info 0.57 >More info Chitin Original data GEO bulk
292 Col-0 Flg22 4h 0.57 >More info 0.61 >More info Col-0 H2O 4h Original data GEO bulk
293 cop1 Seedling BL+ABA 0.69 >More info 0.49 >More info WT Seedling BL+ABA Original data GEO bulk
294 root cells epidermis 140mM NaCl 48 hours 0.73 >More info 0.45 >More info root cells epidermis standard 1 hour root cells epidermis Original data
295 cs26 long day 0.60 >More info 0.58 >More info Leaves-WT-LD leaf Original data GEO bulk
296 FHY3p dark+DEX -0.71 >More info -0.47 >More info FHY3p dark+mock Original data GEO bulk
297 mpk6-ko Flg22 4h 0.45 >More info 0.73 >More info mpk6-ko H2O 4h Original data GEO bulk
298 Nicotinamide-61hr 0.68 >More info 0.49 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
299 GA4 3 h (ga1 seed) 0.77 >More info 0.40 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
300 rhd2 0.62 >More info 0.55 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
301 ulp1c ulp1d +Pto 0.56 >More info 0.61 >More info ulp1c ulp1d mock Original data GEO bulk
302 IAA 0h -0.67 >More info -0.50 >More info control 0h root Original data GEO bulk
303 Nicotinamide-69hr 0.65 >More info 0.52 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
304 ERF96OE 0.61 >More info 0.56 >More info WT leaf Original data
305 cop1 Seedling BL 0.57 >More info 0.60 >More info WT Seedling BL Original data GEO bulk
306 Whole root - S 3H 0.63 >More info 0.54 >More info Whole root - S 0H Original data GEO bulk
307 iae1 -0.60 >More info -0.57 >More info B179 Original data GEO bulk
308 ice1 3H Cold 0.61 >More info 0.55 >More info WT 3H Cold Original data GEO bulk
309 pho1 0.60 >More info 0.56 >More info Col2WT Original data GEO bulk
310 embryo paclobutrazol 0.71 >More info 0.45 >More info embryo-control paclobutrazol embryo Original data GEO bulk
311 vtc2 (I) 0.59 >More info 0.57 >More info Col (I) rosette Original data GEO bulk
312 ani1 T16 -0.71 >More info -0.45 >More info WT T16 root tissue Original data GEO bulk
313 sid2-1 cold -0.57 >More info -0.59 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
314 gul2-1 mutant 0.73 >More info 0.43 >More info WT 7 day-old whole seedlings Original data
315 Laer pretreat GA Flg22 1h 0.45 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
316 Roots Cd -0.76 >More info -0.39 >More info Roots control Cd Root Original data GEO bulk
317 Root dark control 24h 0.64 >More info 0.51 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
318 root cells cortex 140mM NaCl 48 hours 0.73 >More info 0.42 >More info root cells cortex standard 1 hour root cells cortex Original data
319 Tsu -Fe 24h Roots 0.63 >More info 0.52 >More info Tsu +Fe 24h Roots Original data GEO bulk
320 C24-3h IAA 0.62 >More info 0.53 >More info C24-0h IAA whole plant Original data GEO bulk
321 mkk1/mkk2 24h BTH rep 0.63 >More info 0.52 >More info Col-0 24h BTH rep Original data GEO bulk
322 Tsu-1 -Fe 24h 0.63 >More info 0.52 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
323 HARAP aerobic -0.48 >More info -0.67 >More info WT aerobic aerobic Original data GEO bulk
324 abh1 -ABA 0.51 >More info 0.63 >More info Col-0 -ABA Original data GEO bulk
325 Col-0 wt Hypoxic 0.76 >More info 0.38 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
326 Col ozone 2d 0.53 >More info 0.61 >More info Col clean-air 2d ozone Original data GEO bulk
327 WT 24H Cold 0.65 >More info 0.49 >More info WT control Original data GEO bulk
328 WT +Pep2 10h 0.60 >More info 0.54 >More info WT untreated Pep2 Original data GEO bulk
329 edr1 36 h powdery mildew 0.56 >More info 0.58 >More info Col-0 36 h powdery mildew Original data GEO bulk
330 embryo ABA 0.71 >More info 0.43 >More info embryo-control ABA embryo Original data GEO bulk
331 nia1nia2noa1-2 0.70 >More info 0.44 >More info Col-0 whole seedlings Original data GEO bulk
332 gpa1-4/agb1-2 ozone 2d -0.43 >More info -0.71 >More info Col ozone 2d ozone Original data GEO bulk
333 seedling -S Exp 0.45 >More info 0.68 >More info seedling FN Exp seedling Original data
334 sta1 0.62 >More info 0.51 >More info WT Original data GEO bulk
335 pad4-PsmES4326-24hpi -0.60 >More info -0.53 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
336 OE WRKY63.3 high light 0.51 >More info 0.62 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
337 Shoot -K 0.56 >More info 0.57 >More info Control-shoot Original data GEO bulk
338 K starvation (shoot) 0.56 >More info 0.57 >More info Ws (shoot) Original data GEO bulk
339 Hydrogen Peroxide 500 uM 0.52 >More info 0.61 >More info Control RB and PER Hydrogen Peroxide Original data
340 NJ15 0.48 >More info 0.65 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
341 Mutant nph4-1_arf19-1 0.63 >More info 0.49 >More info Col Original data GEO bulk
342 rosette leaves fdh 0.57 >More info 0.55 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
343 root hypoxia pPEP 0.63 >More info 0.49 >More info root hypoxia total hypoxia root Original data GEO bulk
344 1h +Pi -0.66 >More info -0.46 >More info 1h -Pi root Original data GEO bulk
345 root longitudinal zone-4 pH 4.6 0.53 >More info 0.59 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
346 cpctry 0.50 >More info 0.62 >More info Col Original data GEO bulk
347 Salt Stress 24 h (root) 0.58 >More info 0.54 >More info Stress mock 24 h (root) Original data Stress treatments
348 GR-REV 30min 0.71 >More info 0.41 >More info Col 30min Original data GEO bulk
349 35S:RPS4 eds1-2 2h -0.41 >More info -0.71 >More info 35S:RPS4 2h leaves Original data
350 abi4 vtc2 (I) 0.56 >More info 0.55 >More info Col (I) rosette Original data GEO bulk
351 Kas2 roots 2hr KNO3 nitrogen 0.63 >More info 0.48 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
352 ice1 24H Cold 0.52 >More info 0.59 >More info WT 24H Cold Original data GEO bulk
353 whole roots 140 mM NaCl 30 minutes 0.64 >More info 0.47 >More info whole roots standard Original data GEO bulk
354 gun1-1 +lincomycin -0.69 >More info -0.42 >More info Col-0 +lincomycin Original data GEO bulk
355 upf3 0.57 >More info 0.54 >More info WT whole plant Original data GEO bulk
356 bZIP1ko mutant N+Light- 0.54 >More info 0.57 >More info WT-sib N+Light- whole plant Original data GEO bulk
357 camta1/3 warm 0.54 >More info 0.56 >More info WT warm entire aerial part Original data GEO bulk
358 root hypoxia total 0.67 >More info 0.43 >More info root control total Original data GEO bulk
359 root epidermis and lateral root cap pH4.6 0.73 >More info 0.37 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
360 Col whole leaf 3dpi 0.50 >More info 0.60 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
361 dor drought 0.43 >More info 0.67 >More info WT drought Original data GEO bulk
362 rosette Light Wounded 0.45 >More info 0.65 >More info rosette Light Control Original data GEO bulk
363 leaf blade in D 0.45 >More info 0.65 >More info leaf blade in WL leaf blades Original data GEO bulk
364 root cells epidermis 140mM NaCl 3 hours 0.69 >More info 0.41 >More info root cells epidermis standard 1 hour root cells epidermis Original data
365 root cells endodermis 140mM NaCl 20 hours 0.66 >More info 0.43 >More info root cells endodermis standard 1 hour root cells endodermis Original data
366 ahg2-1sid2-2 0.56 >More info 0.53 >More info WT (Col) control Original data GEO bulk
367 shoot-10 μM DEX- 6 hr 0.53 >More info 0.56 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
368 Mutant coi1(leaf) -0.56 >More info -0.53 >More info Col-0 (leaf) Original data GEO bulk
369 bio4-1 mutant leaves 0.56 >More info 0.53 >More info WT leaves leaves Original data GEO bulk
370 aerial organ callus inducing medium 48 h 0.68 >More info 0.41 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
371 WT 6H Cold 0.68 >More info 0.41 >More info WT control Original data GEO bulk
372 npr1-3 DCA 48h 0.45 >More info 0.64 >More info npr1-3 MOCK 48h Original data GEO bulk
373 1 h Light IP RNA -0.51 >More info -0.58 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
374 Bur-0-1h IAA 0.58 >More info 0.51 >More info Bur-0h IAA whole plant Original data GEO bulk
375 Laer pretreat GA+JA Flg22 0h 0.63 >More info 0.45 >More info Laer pretreat water control leaf discs Original data GEO bulk
376 aerial organ callus inducing medium 12 h 0.51 >More info 0.57 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
377 Col leaves 48h LT 0.64 >More info 0.44 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
378 20d after anthesis 0.55 >More info 0.53 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
379 col-5 hrpA 2h 0.50 >More info 0.58 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
380 cdpk6-yfp 0.74 >More info 0.34 >More info Kan seedlings Original data GEO bulk
381 Col-0 INA 6d 0.54 >More info 0.54 >More info Col-0 MOCK 6d Original data GEO bulk
382 root cells endodermis 140mM NaCl 32 hours 0.65 >More info 0.43 >More info root cells endodermis standard 1 hour root cells endodermis Original data
383 Prohexadione 12 h 0.52 >More info 0.56 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
384 Leafminer systemically damaged thaliana seedlings 0.63 >More info 0.45 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
385 downy mildew cotyledons late stage 0.55 >More info 0.52 >More info mock inoculated Cotyledons Original data GEO bulk
386 OH1 0.52 >More info 0.55 >More info Col-0 leaves Original data GEO bulk
387 penta Alternaria 3dpi 0.61 >More info 0.46 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
388 Methyl Jasmonate 1 h 0.44 >More info 0.63 >More info Mock 1 h Original data Basic hormone treatment of seedlings
389 P-chlorophenoxy- isobutyric acid 3 h 0.42 >More info 0.65 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
390 bHLH122 ox -0.42 >More info -0.65 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
391 Root submergence 24h 0.60 >More info 0.47 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
392 protoplasted roots pH4.6 0.58 >More info 0.49 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
393 WT +Pep2 2h 0.72 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
394 Uniconazole 12 h 0.59 >More info 0.48 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
395 mil4 BTH 0.47 >More info 0.60 >More info Col BTH rosettes Original data GEO bulk
396 pip3 At2g19270 TDNA 9 0.64 >More info 0.42 >More info Col-0 whole plant Original data GEO bulk
397 whole roots -Fe 6 hour 0.52 >More info 0.54 >More info whole roots standard Original data GEO bulk
398 Root dark control 7h 0.60 >More info 0.46 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
399 C24-1h IAA 0.66 >More info 0.40 >More info C24-0h IAA whole plant Original data GEO bulk
400 siliques AtHb1 control 0.54 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
401 IRP1-OE-Fe--shoot 0.57 >More info 0.49 >More info COL-0-Fe--shoot shoot Original data
402 CAX1/CAX3 mutant 0.50 >More info 0.56 >More info Col whole plant Original data GEO bulk
403 UV 0.57 >More info 0.49 >More info WT aerial region Original data GEO bulk
404 15m.KNO3 0.53 >More info 0.53 >More info To. KNO3 14 day old Roots Original data GEO bulk
405 root epidermis and lateral root cap 40 mM NaCl 0.63 >More info 0.43 >More info root epidermis and lateral root cap Original data GEO bulk
406 Bur-0-3h IAA 0.48 >More info 0.58 >More info Bur-0h IAA whole plant Original data GEO bulk
407 Pto inoculated 0.46 >More info 0.60 >More info col Original data GEO bulk
408 ABA control 0.71 >More info 0.34 >More info No ABA control Original data GEO bulk
409 BLM 0.59 >More info 0.46 >More info CK BLM seedling Original data
410 WT (Col) glucose -0.61 >More info -0.44 >More info WT (Col) glucose seedlings Original data GEO bulk
411 KCl germinant -0.68 >More info -0.37 >More info Millipore Water germinant KCl seedling Original data
412 IRP1-OE-Ctrl--root 0.54 >More info 0.51 >More info COL-0-Ctrl--root root Original data
413 Octopus overexpressor 35SDYG25 0.52 >More info 0.53 >More info WS Original data GEO bulk
414 Mutant iaa17-6 (IAA) 0.67 >More info 0.38 >More info Col (IAA) Original data GEO bulk
415 Naphthyl- phthalamic acid 3 h 0.37 >More info 0.68 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
416 Mutant sav3-2 (SH) 0.45 >More info 0.60 >More info Col-0 (SH) Original data GEO bulk
417 petiole in D 0.41 >More info 0.64 >More info petiole in WL petioles Original data GEO bulk
418 sav3-2 shade 0.45 >More info 0.60 >More info Col-0 shade seedlings Original data GEO bulk
419 Kas -Fe 24h Roots -0.57 >More info -0.48 >More info Kas +Fe 24h Roots Original data GEO bulk
420 tor mutant 0.69 >More info 0.36 >More info WT (Col) none seedlings Original data GEO bulk
421 Kas-1 -Fe 24h -0.57 >More info -0.48 >More info Kas-1 +Fe 24h roots Original data GEO bulk
422 root cells cortex 140mM NaCl 20 hours 0.58 >More info 0.47 >More info root cells cortex standard 1 hour root cells cortex Original data
423 col-5 hrpA 4h 0.48 >More info 0.57 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
424 Elevated CO2 fully expanded leaf 0.57 >More info 0.47 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
425 camta2/3 warm 0.53 >More info 0.51 >More info WT warm entire aerial part Original data GEO bulk
426 ein5-1 ski2-3 0.57 >More info 0.47 >More info Col-0 aerial tissue Original data
427 sdg2 0.57 >More info 0.47 >More info wt seedling Original data GEO bulk
428 MG132 3 h 0.57 >More info 0.47 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
429 vte2 leaves 48h LT 0.52 >More info 0.52 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
430 Col in Pi deficiency medium 0.34 >More info 0.70 >More info Col in control medium root Original data GEO bulk
431 8h-DC3000 avrRpm1 0.45 >More info 0.59 >More info 8h-DC3000 leaves Original data GEO bulk
432 gpa1 +ABA GC -0.35 >More info -0.69 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
433 WT-Dry 0.49 >More info 0.55 >More info WT-CK dehydration treatment 1h Original data
434 upf1 0.56 >More info 0.47 >More info WT whole plant Original data GEO bulk
435 atgsnor1-1 -0.52 >More info -0.51 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
436 abi4-102 (II) 0.55 >More info 0.48 >More info Col (II) rosette Original data GEO bulk
437 WT-16ºC -0.57 >More info -0.46 >More info WT-23ºC Original data GEO bulk
438 Nicotinamide-89hr 0.63 >More info 0.40 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
439 camta1/2/3 warm 0.53 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
440 toc1-1-93hr 0.64 >More info 0.39 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
441 BR 0.66 >More info 0.37 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
442 Col whole leaf amplified 5 dpi 0.44 >More info 0.59 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
443 Col whole leaf 5 dpi 0.44 >More info 0.59 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
444 Col BTH 0.36 >More info 0.67 >More info Col rosettes Original data GEO bulk
445 root cells epidermis 140mM NaCl 8 hours 0.67 >More info 0.35 >More info root cells epidermis standard 1 hour root cells epidermis Original data
446 AFB1 0h 0.65 >More info 0.37 >More info Col 0h Leaf Original data GEO bulk
447 root columella root cap 40 mM NaCl 0.60 >More info 0.42 >More info root columella root cap Original data GEO bulk
448 camta1/2/3 24h cold 0.52 >More info 0.50 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
449 Time-0 chr11-1chr17-1 -0.51 >More info -0.51 >More info Time-0 Col-0 leaf explants Original data
450 seedling 3h after Gamma WT 0.65 >More info 0.37 >More info seedling day 1 unirradiated WT 3h Original data
451 WT 30μM phosphate 8 hours. -0.51 >More info -0.51 >More info WT control (not supplemented). Original data
452 Laer pretreat JA Flg22 2h 0.61 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
453 Bur-0-30min IAA 0.65 >More info 0.37 >More info Bur-0h IAA whole plant Original data GEO bulk
454 Uniconazole 3 h 0.44 >More info 0.58 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
455 Rose Bengal 0.5 uM 0.38 >More info 0.64 >More info Control RB and PER Rose Bengal Original data
456 Laer pretreat JA Flg22 1h 0.62 >More info 0.39 >More info Laer pretreat water control leaf discs Original data GEO bulk
457 Imidazolinone EC50 0.55 >More info 0.46 >More info Carrier (Imidazolinone) Original data GEO bulk
458 root cells stele 140mM NaCl 48 hours 0.64 >More info 0.37 >More info root cells stele standard 1 hour root cells stele Original data
459 Cold Stress 24 h (root) 0.58 >More info 0.43 >More info Stress mock 24 h (root) Original data Stress treatments
460 glk1 glk2 GLK1-GR +DEX 24h -0.76 >More info -0.25 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
461 SA 4mM 0.61 >More info 0.40 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
462 Atss3 Light4 -0.52 >More info -0.48 >More info Atss3 Dark0.5 Original data GEO bulk
463 Nicotinamide-93hr 0.60 >More info 0.40 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
464 Dark 3day ivd 0.52 >More info 0.48 >More info 0h ivd Original data
465 seedling 1.5h after Gamma WT 0.65 >More info 0.35 >More info seedling day 1 unirradiated WT 1.5h Original data
466 toc1-1-61hr 0.73 >More info 0.27 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
467 Light 3day wt -0.42 >More info -0.58 >More info 0h wt Original data
468 sid2 -0.44 >More info -0.56 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
469 smg5-2 0.48 >More info 0.52 >More info WT whole plant Original data GEO bulk
470 2 hr Hypoxia IP RNA 0.60 >More info 0.39 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
471 Col-0 2h NAA 0.62 >More info 0.37 >More info Col-0 6h MOCK Original data GEO bulk
472 WT 1wk -P 0.55 >More info 0.44 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
473 1.5 hr ammonium 0.56 >More info 0.43 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
474 M6PR transgenic leaf 100mM NaCl -0.51 >More info -0.48 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
475 Mutant arf19-1 (IAA) -0.58 >More info -0.41 >More info Col (IAA) Original data GEO bulk
476 toc1-1-69hr 0.65 >More info 0.34 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
477 Ts5 roots 2hr KCl control 0.61 >More info 0.38 >More info Col0 roots 2hr KCl control root Original data GEO bulk
478 root endodermis and quiescent center 40 mM NaCl 0.55 >More info 0.44 >More info root endodermis and quiescent center Original data GEO bulk
479 KAN1-GR 30min 0.74 >More info 0.25 >More info KAN1-GR 0min Original data GEO bulk
480 Leaf GLU1-KO 0.49 >More info 0.50 >More info Leaf Col(0) rosette leaves Original data GEO bulk
481 hst5 0.45 >More info 0.54 >More info Col-0 Original data GEO bulk
482 HARAP hypoxic 0.43 >More info 0.56 >More info hypoxic hypoxia Original data GEO bulk
483 camta3-1 0.59 >More info 0.39 >More info WT Original data GEO bulk
484 Transgenic LEC2GR Seedling 1h Dex 0.58 >More info 0.40 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
485 root cells stele 140mM NaCl 32 hours 0.59 >More info 0.39 >More info root cells stele standard 1 hour root cells stele Original data
486 camta3-2 0.50 >More info 0.48 >More info WT Original data GEO bulk
487 csn3-1 light 0.54 >More info 0.44 >More info WT light Original data GEO bulk
488 ORS1 induced 0.53 >More info 0.45 >More info mock-induced rosette leaves Original data GEO bulk
489 vtc2-1 -0.57 >More info -0.41 >More info Col-0 whole plant Original data GEO bulk
490 root longitudinal zone-4 NaCl 0.53 >More info 0.45 >More info root longitudinal zone-4 Original data GEO bulk
491 DC3000 hrcC 2 h (leaf) 0.40 >More info 0.58 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
492 mkk2 24h BTH rep 0.41 >More info 0.57 >More info Col-0 24h BTH rep Original data GEO bulk
493 pnp1-1 3h +P 0.55 >More info 0.42 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
494 Col-0 overexpressing At1g54160 control 0.66 >More info 0.31 >More info WT no treatement Original data GEO bulk
495 A. lyrata -0.53 >More info -0.44 >More info A. thaliana mature leaves before flowering Original data GEO bulk
496 At1g54160 ox 0.66 >More info 0.31 >More info Col-0 Original data GEO bulk
497 -Sulfate 24 h 0.32 >More info 0.65 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
498 Col laser microdissected 5 dpi 0.38 >More info 0.59 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
499 upb1-1 elongation zone -0.43 >More info -0.54 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
500 Col-0 mbs1-1 HL 3h -0.41 >More info -0.56 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
501 seedling h S Exp -0.36 >More info -0.61 >More info seedling -S Exp seedling Original data
502 atmyc2 cop1 Seedling BL 0.40 >More info 0.56 >More info WT Seedling BL Original data GEO bulk
503 CLO 4mM 0.61 >More info 0.35 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
504 Col-0 Root 100 mM ATP 30 min 0.59 >More info 0.37 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
505 root columella root cap -S -0.57 >More info -0.39 >More info root columella root cap pH5.7 Original data GEO bulk
506 seedling 6h after HZE WT 0.54 >More info 0.42 >More info seedling day 1 unirradiated WT 6h Original data
507 aerial organ callus inducing medium 24h 0.50 >More info 0.46 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
508 P35S:rGRF3 0.53 >More info 0.43 >More info WS Original data GEO bulk
509 gh3.5D uninoculated -0.51 >More info -0.45 >More info Col-0 48 hpi Original data GEO bulk
510 protoplasts T2 [flg22] 0.46 >More info 0.50 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
511 D2O 0.43 >More info 0.53 >More info H2O seedling Original data GEO bulk
512 GA 0.43 >More info 0.53 >More info none GA Rosette Original data GEO bulk
513 dense canopy 0.41 >More info 0.55 >More info single (control) petiole Original data GEO bulk
514 DC3000 7h 0.34 >More info 0.62 >More info Mock 7h DC3000 Original data GEO bulk
515 Root submergence 7h 0.55 >More info 0.40 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
516 Heat and anoxia 0.39 >More info 0.56 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
517 root cells endodermis 140mM NaCl 1 hour 0.59 >More info 0.36 >More info root cells endodermis standard 1 hour root cells endodermis Original data
518 AtMinD1 Prolonged-induction 0.50 >More info 0.45 >More info Control whole plant Original data GEO bulk
519 RGA-GR-DEX 0.33 >More info 0.62 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
520 cell culture 4 h phytoprostane A1 0.35 >More info 0.60 >More info cell culture 4 h control Original data GEO bulk
521 RPL18 TuMV inoculated total RNA 0.44 >More info 0.51 >More info mock inoculated total RNA PO Original data GEO bulk
522 opr3 OPDA 2 h 0.20 >More info 0.75 >More info opr3 0 h Original data GEO bulk
523 AtLysM RLK1 mutant chitooctaose -0.43 >More info -0.52 >More info WT chitooctaose Original data GEO bulk
524 epidermis auxin 0.54 >More info 0.40 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
525 seedling 1.5h after HZE WT 0.51 >More info 0.43 >More info seedling day 1 unirradiated WT 1.5h Original data
526 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.63 >More info -0.31 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
527 erf104-ko Flg22 4h 0.23 >More info 0.71 >More info erf104-ko H2O 4h Original data GEO bulk
528 IAA7mII over-expressor IAA Treated 0.25 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
529 Mock pft1 leaf 0.32 >More info 0.62 >More info Mock Col-0 leaf water leaf Original data GEO bulk
530 Tsu -Fe 48h Shoots 0.34 >More info 0.60 >More info Tsu +Fe 24h Shoots Original data GEO bulk
531 root protophloem 40 mM NaCl 0.44 >More info 0.50 >More info root protophloem Original data GEO bulk
532 amiRAP aerobic -0.28 >More info -0.65 >More info WT aerobic aerobic Original data GEO bulk
533 Elevated CO2 expanding leaf 0.51 >More info 0.42 >More info Ambient CO2 expanding leaf expanding leaf Original data
534 low CO2 + dark 0.41 >More info 0.52 >More info normal CO2 + light Original data GEO bulk
535 phyB Rc50 0.53 >More info 0.39 >More info WT(Ler) Rc50 Original data GEO bulk
536 root cells endodermis and quiescent center -Fe 0.53 >More info 0.39 >More info whole roots standard Original data GEO bulk
537 spch 0.53 >More info 0.39 >More info Col-0 WT whole seedling Original data GEO bulk
538 tt4 0.40 >More info 0.52 >More info Col-0 aerial part Original data
539 Laer pretreat GA Flg22 0h 0.60 >More info 0.32 >More info Laer pretreat water control leaf discs Original data GEO bulk
540 root cells epidermis 140mM NaCl 32 hours 0.62 >More info 0.30 >More info root cells epidermis standard 1 hour root cells epidermis Original data
541 Methyl Jasmonate 0.5 h 0.34 >More info 0.58 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
542 E.orontii Infection 3 day 0.30 >More info 0.62 >More info Uninfection 3 day Original data Elicitor treatments
543 flu dark 8hours/30 minute light 0.29 >More info 0.63 >More info col dark 8hours/30 minute light Original data GEO bulk
544 Protoplast Induced 0.34 >More info 0.58 >More info Uninduced Original data GEO bulk
545 rao1-1 3h antimycin A -0.41 >More info -0.51 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
546 dorn1-1 Root 100 mM ATP 30 min -0.30 >More info -0.62 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
547 rpoTmp(line) MLD stressed 0.41 >More info 0.51 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
548 Col leaf 100mM NaCl 0.52 >More info 0.39 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
549 Col leaf 100mM NaCl 0.52 >More info 0.39 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
550 Col 100mM NaCl 0.52 >More info 0.39 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
551 root cells cortex 140mM NaCl 1 hour 0.54 >More info 0.37 >More info root cells cortex standard 1 hour root cells cortex Original data
552 20m.KNO3 0.56 >More info 0.35 >More info To. KNO3 14 day old Roots Original data GEO bulk
553 miR393 0h -0.40 >More info -0.51 >More info WT 0h Leaf tissue Original data GEO bulk
554 TA induced 0.39 >More info 0.52 >More info Methanol TA Suspension cells Original data GEO bulk
555 12m.KCl 0.38 >More info 0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
556 OsSAP11 expressing -0.38 >More info -0.53 >More info WT seedlings Original data GEO bulk
557 KAN1-GR 60min 0.62 >More info 0.29 >More info KAN1-GR 0min Original data GEO bulk
558 root cells epidermis 140mM NaCl 20 hours 0.60 >More info 0.31 >More info root cells epidermis standard 1 hour root cells epidermis Original data
559 ARR21C-ox 0.57 >More info 0.34 >More info Col-0 Original data ARR21C overexpression
560 cs26 short-day -0.41 >More info -0.50 >More info Leaves-WT-SD leaf Original data GEO bulk
561 Wounding Stress3 h (shoot) 0.34 >More info 0.56 >More info Stress mock 3 h (shoot) Original data Stress treatments
562 SCR 48hr-S 0.51 >More info 0.39 >More info SCR 0hr endodermis Original data
563 root cells stele 140mM NaCl 1 hour 0.54 >More info 0.36 >More info root cells stele standard 1 hour root cells stele Original data
564 root stele pH4.6 0.53 >More info 0.37 >More info root stele pH5.7 Original data GEO bulk
565 Anoxia 0.50 >More info 0.40 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
566 WT roots - Fe 0.73 >More info 0.17 >More info WT roots + Fe Roots Original data GEO bulk
567 sps1 -0.53 >More info -0.37 >More info WT seedling Original data GEO bulk
568 root control pGL2 0.51 >More info 0.39 >More info root control total control root Original data GEO bulk
569 anac017-2 H2O2 3h -0.66 >More info -0.24 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
570 sex1-3 0.38 >More info 0.52 >More info Col-WT leaves Original data GEO bulk
571 ahg1-1 0.60 >More info 0.30 >More info ABA control Original data GEO bulk
572 Kas-1 -Fe 48h -0.55 >More info -0.34 >More info Kas-1 +Fe 24h roots Original data GEO bulk
573 Kas -Fe 48h Roots -0.55 >More info -0.34 >More info Kas +Fe 24h Roots Original data GEO bulk
574 del1-1 5dpi 0.51 >More info 0.38 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
575 elevated CO2 high Mg root -0.65 >More info -0.24 >More info atmospheric CO2 high Mg root Root Original data
576 pnp1-1 1wk +P 0.52 >More info 0.37 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
577 Dark 6h ivd 0.52 >More info 0.37 >More info 0h ivd Original data
578 root cells columella root cap -Fe 0.50 >More info 0.39 >More info whole roots standard Original data GEO bulk
579 Brz220 12 h 0.58 >More info 0.31 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
580 GR-REV 60min 0.59 >More info 0.30 >More info Col 60min Original data GEO bulk
581 OXUPB1-2 meristematic zone 0.56 >More info 0.32 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
582 aba2 1% sucrose 12-day-old 0.55 >More info 0.33 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
583 WT 90-105 min Xanthomonas 0.33 >More info 0.55 >More info WT T0 Original data GEO bulk
584 Laer pretreat GA+JA Flg22 1h 0.51 >More info 0.37 >More info Laer pretreat water control leaf discs Original data GEO bulk
585 FOX line K16331 0.50 >More info 0.38 >More info empty vector control (T3) FOX lines Original data GEO bulk
586 albino Ds13-2198-1 -0.60 >More info -0.28 >More info control Original data GEO bulk
587 shoots WT 0uM Fe 0.63 >More info 0.25 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
588 shoot-10 μM DEX- 12 hr 0.37 >More info 0.51 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
589 rrd1 IBA -0.56 >More info -0.31 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
590 rao2 H2O2 3h -0.31 >More info -0.56 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
591 line J2731-5 days control + 2 days salt s 0.51 >More info 0.36 >More info line J2731-7 days-control Original data
592 vte1-1 3d vernalization -0.60 >More info -0.27 >More info WT 3d vernalization Original data GEO bulk
593 root cells cortex 140mM NaCl 32 hours 0.66 >More info 0.21 >More info root cells cortex standard 1 hour root cells cortex Original data
594 Root P recovery 0.72 >More info 0.15 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
595 35S:RPS4 rrs1-11 8h -0.50 >More info -0.37 >More info 35S:RPS4 8h leaves Original data
596 IAA 3 h 0.26 >More info 0.61 >More info Mock 3 h Original data Basic hormone treatment of seedlings
597 NaCl Col 0.58 >More info 0.29 >More info Col Original data GEO bulk
598 4C 2h(SOIL) 0.53 >More info 0.33 >More info 4C 0h(SOIL) Original data GEO bulk
599 COL-0-Fe--root 0.53 >More info 0.33 >More info COL-0-Ctrl--root root Original data
600 WT in -N 0.34 >More info 0.52 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
601 GA 120min 0.62 >More info 0.24 >More info CON120 GA 120 min. root tips Original data GEO bulk
602 C58 3hpi 0.35 >More info 0.51 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
603 irradiated leaf (WT 1d) 0.53 >More info 0.32 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
604 line J1551-5 days control + 2 days salt s 0.56 >More info 0.29 >More info line J1551-7 days-control Original data
605 eds16 whole leaf 6hpi -0.51 >More info -0.34 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
606 AAF-OX 0.56 >More info 0.29 >More info Col-0 Rosette leaf Original data GEO bulk
607 root longitudinal zone-1 -Fe 0.29 >More info 0.56 >More info root longitudinal zone-1 standard Original data GEO bulk
608 RPL18 TuMV inoculated polysomal RNA 0.33 >More info 0.52 >More info mock inoculated polysomal RNA PO Original data GEO bulk
609 Root -P -0.72 >More info -0.13 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
610 Infected pft1 leaf 0.28 >More info 0.57 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
611 leaf13 0.35 >More info 0.50 >More info unwounded leaves none Original data GEO bulk
612 vte1-1 1d vernalization 0.53 >More info 0.31 >More info WT 1d vernalization Original data GEO bulk
613 HRE1-RNAi20 normoxia -0.53 >More info -0.31 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
614 agb1 gpa1 -ABA GC -0.32 >More info -0.52 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
615 cat2-short-day 2d 0.29 >More info 0.55 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
616 abi1 hypocotyl 0.28 >More info 0.56 >More info Ler hypocotyl hypocotyl Original data GEO bulk
617 Tsu-1 -Fe 48h 0.59 >More info 0.25 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
618 Tsu -Fe 48h Roots 0.59 >More info 0.25 >More info Tsu +Fe 24h Roots Original data GEO bulk
619 Mutant sav3-2 (WL) 0.26 >More info 0.58 >More info Col-0 (WL) Original data GEO bulk
620 col-5 DC3000 4h 0.22 >More info 0.62 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
621 sav3-2 light 0.26 >More info 0.58 >More info Col-0 light seedlings Original data GEO bulk
622 RRE1 Chitin 0.51 >More info 0.32 >More info Chitin Original data GEO bulk
623 auxin and brassinazole seedlings 0.52 >More info 0.31 >More info auxin seedlings Original data GEO bulk
624 Col-O high light 0.32 >More info 0.51 >More info Col-O bule light Original data GEO bulk
625 pnp1-1 1wk -P 0.62 >More info 0.21 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
626 ORE1-IOE-2h+Est -0.22 >More info -0.61 >More info ORE1-IOE-2h+Mock Estradiol Whole seedling Original data GEO bulk
627 roots bhlh100/101 0uM Fe 0.53 >More info 0.29 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
628 35S::ZAT12 0.50 >More info 0.32 >More info gl1 Original data GEO bulk
629 light -0.64 >More info -0.18 >More info dark light seedling Original data GEO bulk
630 Dex-rga(delta17) 2h GA4 -0.56 >More info -0.26 >More info Vector 4h GA4 shoots Original data GEO bulk
631 atmospheric CO2 high Mg root -0.51 >More info -0.30 >More info atmospheric CO2 normal Mg root Root Original data
632 GR:KAN1 DEX Shade 0.52 >More info 0.29 >More info GR:KAN1 Mock Shade seedlings Original data
633 csn4-1 mutant 0.54 >More info 0.27 >More info WT dark Original data GEO bulk
634 Ba1 UV 0.65 >More info 0.16 >More info Ba1 mock UV seedling Original data
635 miR 0h 0.54 >More info 0.27 >More info Col 0h Leaf Original data GEO bulk
636 pollinated pop2-1 flowers -0.50 >More info -0.31 >More info pollinated WT flowers flowers Original data GEO bulk
637 npr1-3 MOCK 48h -0.31 >More info -0.50 >More info Col-0 MOCK 48h Original data GEO bulk
638 10min Reillumination Total RNA -0.58 >More info -0.23 >More info 1h Dark Total RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
639 Brz220 3 h 0.52 >More info 0.28 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
640 ex2 flu dark 8hours/30 minute light 0.25 >More info 0.55 >More info col dark 8hours/30 minute light Original data GEO bulk
641 aba1 hypocotyl 0.28 >More info 0.52 >More info Ler hypocotyl hypocotyl Original data GEO bulk
642 pif3 Dark 0h -0.69 >More info -0.11 >More info WT Dark 0h etiolated seedling Original data GEO bulk
643 WT Shoot Hypoxia 0.58 >More info 0.22 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
644 Wounding Stress3 h (root) -0.54 >More info -0.25 >More info Stress mock 3 h (root) Original data Stress treatments
645 A. thaliana-A. halleri hybrid -0.53 >More info -0.26 >More info A. thaliana mature leaves before flowering Original data GEO bulk
646 24h volatiles Sm. R3089 -0.54 >More info -0.25 >More info 24h untreated whole seedling Original data GEO bulk
647 scrm-D 0.25 >More info 0.54 >More info Col-0 WT whole seedling Original data GEO bulk
648 OE WRKY63.3 0.27 >More info 0.52 >More info OE WRKY40.4 none leaf Original data GEO bulk
649 WT drought 0.20 >More info 0.59 >More info WT control All aerial tissue Original data GEO bulk
650 Daminozide 3 h -0.00 >More info 0.78 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
651 stn7-1 -0.28 >More info -0.50 >More info Col-0 rosette leaves Original data GEO bulk
652 phyB mutant 22C 10hrs -0.19 >More info -0.59 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
653 35S::ERF104 H2O 4h 0.52 >More info 0.25 >More info Col-0 H2O 4h Original data GEO bulk
654 WT cold 12 h 0.54 >More info 0.23 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
655 Ws seedlings 0.56 >More info 0.21 >More info ged1 seedlings Original data GEO bulk
656 ged1 seedlings -0.56 >More info -0.21 >More info Ws seedlings Original data GEO bulk
657 4h decapitation -0.21 >More info -0.56 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
658 Whole root - low pH 1H 0.15 >More info 0.62 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
659 sfr3 cold 0.24 >More info 0.53 >More info WT cold All aerial tissue Original data GEO bulk
660 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.26 >More info -0.51 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
661 iron minus 0 h 0.60 >More info 0.16 >More info iron +0 h root Original data GEO bulk
662 cat2-hCO2 -0.60 >More info -0.16 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
663 sng1 UV 0.63 >More info 0.13 >More info UV aerial region Original data GEO bulk
664 Col-0 24hpi A. brassicicola 0.74 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
665 Dark 40min pls UV-AB 5min 0.56 >More info 0.20 >More info Dark 45 min Original data Light treatments
666 E.orontii Infection 6 h 0.20 >More info 0.56 >More info Uninfection 6 h Original data Elicitor treatments
667 noa1-2 0.58 >More info 0.17 >More info Col-0 whole seedlings Original data GEO bulk
668 Col 0 2h KNO3 -0.58 >More info -0.16 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
669 t-zeatin 0.5 h -0.19 >More info -0.55 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
670 sfr6 drought -0.20 >More info -0.54 >More info WT drought All aerial tissue Original data GEO bulk
671 atmyc2 cop1 Seedling Dark 0.57 >More info 0.16 >More info WT Seedling Dark Original data GEO bulk
672 eds16 whole leaf 7d UI -0.06 >More info -0.67 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
673 Leaf wounded 0.23 >More info 0.50 >More info Leaf control vegetative leaf Original data GEO bulk
674 WT NAA 1h 0.53 >More info 0.19 >More info WT 0h Leaf tissue Original data GEO bulk
675 arp6-10 24h at 27 ºC 0.54 >More info 0.18 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
676 root cells epidermis 140mM NaCl 1 hour 0.51 >More info 0.21 >More info root cells epidermis standard 1 hour root cells epidermis Original data
677 ein3 eil1 0.55 >More info 0.16 >More info Col-0 mock Whole seedling Original data GEO bulk
678 TAMM27 roots 2hr KNO3 nitrogen 0.51 >More info 0.19 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
679 shoot-10 μM DEX- 24hr 0.20 >More info 0.50 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
680 seedling 3h after HZE WT 0.67 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
681 46T-CK 0.18 >More info 0.51 >More info WT-CK none Original data
682 ALC Toc1 light-light Mock -0.52 >More info -0.16 >More info Col light-light Mock no ethanol Original data GEO bulk
683 agb1 -ABA GC -0.01 >More info -0.67 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
684 WT zebularine 5d -0.50 >More info -0.17 >More info WT mock 5d shoot apical meristem Original data
685 whole roots -Fe 3 hour 0.51 >More info 0.16 >More info whole roots standard Original data GEO bulk
686 Fe starvation 3 h 0.51 >More info 0.16 >More info Control Original data GEO bulk
687 HairpinZ 4 h (leaf) 0.70 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
688 SA Treated 0.59 >More info 0.08 >More info Water Original data GEO bulk
689 MPK6 ox Shoot Hypoxia 0.61 >More info 0.06 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
690 bri1-5 mutant -0.56 >More info -0.10 >More info WT 7 day-old whole seedlings Original data
691 seed germinating in countinuous light 48 h SL -0.52 >More info -0.14 >More info Control for tissue data seed Original data GEO bulk
692 ein2 mutant roots IAA 0.51 >More info 0.15 >More info roots ethylene Original data GEO bulk
693 Prohexadione 3 h 0.13 >More info 0.53 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
694 WT cold 24h 0.53 >More info 0.12 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
695 elf3-7-23ºC -0.52 >More info -0.13 >More info WT-23ºC Original data GEO bulk
696 Col-0 DCA 6d 0.55 >More info 0.09 >More info Col-0 MOCK 6d Original data GEO bulk
697 Lip0 UV 0.51 >More info 0.13 >More info Lip0 mock UV seedling Original data
698 msg2 -0.51 >More info -0.13 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
699 AsAKiin11 T2 0.14 >More info 0.50 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
700 ANAC102 knock-out -0.52 >More info -0.11 >More info Col-0 Original data GEO bulk
701 GO5; 0h switch to ambient CO2 concentrations; -0.53 >More info -0.09 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
702 mutant acs2B (single mutant) -0.51 >More info -0.11 >More info col control (single mutant) Original data GEO bulk
703 Blue Light 4 h 0.67 >More info -0.06 >More info White Light 4 h Original data Light treatments
704 toc1-1-89hr 0.52 >More info 0.09 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
705 Shoot apex inflorescence (after bolting) -0.04 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
706 -Sulfate 2 h 0.50 >More info 0.10 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
707 whole roots -Fe 12 hour 0.52 >More info 0.08 >More info whole roots standard Original data GEO bulk
708 WT Red light 1h 0.71 >More info -0.12 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
709 CCA14 dark late 0.52 >More info 0.06 >More info Col dark late Original data GEO bulk
710 FLIGHT TAGESB plate 0.52 >More info 0.06 >More info GROUND CONTROL TAGESB plate Original data
711 hyl1 0.08 >More info 0.50 >More info Col-0 Original data GEO bulk
712 Root sol2 0.52 >More info 0.05 >More info Root wt Original data GEO bulk
713 Cs shoot -0.02 >More info -0.55 >More info control shoot Original data GEO bulk
714 CCA1-ox 6am non-polysomal 0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
715 ced1 -0.05 >More info -0.51 >More info WT PEG 6hr seedlings Original data GEO bulk
716 opr3 OPDA 0.5 h 0.02 >More info 0.54 >More info opr3 0 h Original data GEO bulk
717 3x(p) -0.02 >More info 0.58 >More info 2x two week old seedlings Original data
718 Col PSTDC3000 24h 0.68 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
719 P. infestans 6 h (leaf) 0.70 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
720 Paclobutrazol 3 h -0.03 >More info 0.57 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
721 seed germinating in countinuous light 24h SL -0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
722 pif4pif5 mut dark 0.05 >More info -0.54 >More info WT dark Original data GEO bulk
723 cat2-short-day 4d -0.10 >More info 0.58 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
724 axr2-BR -0.51 >More info 0.04 >More info BR BR dark-grown seedlings Original data GEO bulk
725 G3P 0.54 >More info -0.09 >More info Mock distal leaves Original data GEO bulk
726 roots ethylene -0.53 >More info 0.10 >More info roots air Original data GEO bulk
727 ahg3-1 0.50 >More info -0.07 >More info ABA control Original data GEO bulk
728 4d red light grown hmr-22 seedlings 0.63 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
729 bri1-116 -0.31 >More info 0.73 >More info Col seedling Original data GEO bulk
730 0h hml 0.51 >More info -0.13 >More info 0h wt Original data
731 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.50 >More info -0.12 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
732 Red/FR Light45min -0.23 >More info 0.59 >More info FarRed Light 45min Original data Light treatments
733 spx1 spx2 resupplied Pi 4h -0.51 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
734 nas4x roots - Fe -0.50 >More info 0.26 >More info WT roots - Fe Roots Original data GEO bulk
735 FarRed Light 45min 0.31 >More info -0.53 >More info White Light 45min Original data Light treatments